Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784850 | sp|Q9LY62|GMT1_ARATH | 63.848 | 343 | 104 | 5 | 3 | 344 | 11 | 334 | 2.24e-157 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784850 | G7KGW5 | 93.605 | 344 | 10 | 1 | 1 | 344 | 1 | 332 | 0.0 | 658 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005910 | Msa0784850 | 0.800718 | 1.263782e-48 | -8.615850e-47 |
| Msa0060710 | Msa0784850 | -0.806811 | 6.862996e-50 | -8.615850e-47 |
| Msa0069150 | Msa0784850 | -0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0087550 | Msa0784850 | 0.824322 | 8.594631e-54 | -8.615850e-47 |
| Msa0738400 | Msa0784850 | 0.800843 | 1.191406e-48 | -8.615850e-47 |
| Msa0784850 | Msa0817710 | 0.923938 | 1.371565e-89 | -8.615850e-47 |
| Msa0784850 | Msa0858170 | 0.800241 | 1.580417e-48 | -8.615850e-47 |
| Msa0784850 | Msa1033250 | -0.801507 | 8.716840e-49 | -8.615850e-47 |
| Msa0784850 | Msa1113460 | -0.815926 | 7.196758e-52 | -8.615850e-47 |
| Msa0784850 | Msa1121300 | 0.802295 | 6.004578e-49 | -8.615850e-47 |
| Msa0784850 | Msa1156490 | 0.801101 | 1.055623e-48 | -8.615850e-47 |
| Msa0784850 | Msa1161060 | -0.806090 | 9.738632e-50 | -8.615850e-47 |
| Msa0784850 | Msa1168050 | -0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0784850 | Msa1184100 | -0.811275 | 7.593634e-51 | -8.615850e-47 |
| Msa0784850 | Msa1208450 | -0.800804 | 1.213475e-48 | -8.615850e-47 |
| Msa0784850 | Msa1217260 | 0.803316 | 3.695330e-49 | -8.615850e-47 |
| Msa0784850 | Msa1228260 | -0.814269 | 1.678869e-51 | -8.615850e-47 |
| Msa0784850 | Msa1271220 | -0.816292 | 5.962499e-52 | -8.615850e-47 |
| Msa0784850 | Msa1308430 | -0.811312 | 7.457702e-51 | -8.615850e-47 |
| Msa0784850 | Msa1341850 | -0.817217 | 3.697151e-52 | -8.615850e-47 |
| Msa0784850 | Msa1350590 | -0.809030 | 2.314529e-50 | -8.615850e-47 |
| Msa0784850 | Msa1379020 | 0.819635 | 1.047454e-52 | -8.615850e-47 |
| Msa0134270 | Msa0784850 | 0.814659 | 1.376237e-51 | -8.615850e-47 |
| Msa0174820 | Msa0784850 | 0.803376 | 3.590465e-49 | -8.615850e-47 |
| Msa0372570 | Msa0784850 | -0.810840 | 9.438004e-51 | -8.615850e-47 |
| Msa0380470 | Msa0784850 | -0.804915 | 1.717632e-49 | -8.615850e-47 |
| Msa0429990 | Msa0784850 | -0.803906 | 2.787633e-49 | -8.615850e-47 |
| Msa0450920 | Msa0784850 | -0.806260 | 8.966894e-50 | -8.615850e-47 |
| Msa0500580 | Msa0784850 | -0.807575 | 4.727710e-50 | -8.615850e-47 |
| Msa0512950 | Msa0784850 | -0.814610 | 1.411038e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784850 | MtrunA17_Chr5g0436731 | 93.605 | 344 | 10 | 1 | 1 | 344 | 1 | 332 | 0.0 | 658 |
| Msa0784850 | MtrunA17_Chr1g0197731 | 36.458 | 192 | 101 | 5 | 85 | 275 | 538 | 709 | 1.53e-26 | 110 |
| Msa0784850 | MtrunA17_Chr1g0147601 | 31.439 | 264 | 158 | 7 | 81 | 338 | 85 | 331 | 3.68e-26 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784850 | AT3G55830.1 | 63.848 | 343 | 104 | 5 | 3 | 344 | 11 | 334 | 2.28e-158 | 447 |
| Msa0784850 | AT5G04500.1 | 29.555 | 247 | 140 | 6 | 85 | 326 | 532 | 749 | 2.23e-27 | 113 |
| Msa0784850 | AT1G80290.1 | 31.022 | 274 | 169 | 9 | 73 | 338 | 49 | 310 | 1.54e-20 | 91.3 |
| Msa0784850 | AT1G80290.2 | 31.022 | 274 | 169 | 9 | 73 | 338 | 57 | 318 | 1.82e-20 | 91.3 |
Find 110 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAGATTTAAAGAAATTA+AGG | 0.224224 | 5_2:+69606215 | Msa0784850:CDS |
| GGTTCGGAGTCGAGAGATTT+TGG | 0.229810 | 5_2:-69604126 | None:intergenic |
| TTACTGAACCGAACCGCTTT+TGG | 0.253059 | 5_2:+69604378 | Msa0784850:five_prime_UTR |
| ATTTAAAGAAATTAAGGATT+TGG | 0.259132 | 5_2:+69606221 | Msa0784850:CDS |
| CTGGTTCAAGTTTCTTATTA+TGG | 0.259686 | 5_2:+69604578 | Msa0784850:CDS |
| TTTATTGCCGTTTGATTGAT+TGG | 0.294893 | 5_2:-69604206 | None:intergenic |
| CCTAAGGAATTTGCTAAATC+AGG | 0.302144 | 5_2:-69608697 | None:intergenic |
| GAACCTTGAATCAGTGAAAC+TGG | 0.317353 | 5_2:-69604629 | None:intergenic |
| ATCAACTGGAATTAGTAGTT+TGG | 0.324045 | 5_2:+69608378 | Msa0784850:CDS |
| CTTGATCTTGGCTGATTTAA+CGG | 0.328719 | 5_2:-69604506 | None:intergenic |
| TGGAATTCGCATTTGATGTT+TGG | 0.335175 | 5_2:+69606298 | Msa0784850:CDS |
| GCAACTGGTGCACCCCGTTA+TGG | 0.341678 | 5_2:+69607380 | Msa0784850:CDS |
| TGCACCCCGTTATGGGTTAA+AGG | 0.343295 | 5_2:+69607388 | Msa0784850:CDS |
| ATATCGTCCGTCTCTAGATT+TGG | 0.345844 | 5_2:-69606151 | None:intergenic |
| CGTGTCTTGGATCATGAAAA+TGG | 0.357281 | 5_2:-69604299 | None:intergenic |
| AACCTATTTACTTCTGTGTA+TGG | 0.359210 | 5_2:+69608433 | Msa0784850:CDS |
| ATATATGAGATTGGATCAAC+TGG | 0.362340 | 5_2:+69608364 | Msa0784850:CDS |
| TGAAGTTCCATGCTAATGTT+AGG | 0.373032 | 5_2:+69608168 | Msa0784850:intron |
| AATTACCTTTAACCCATAAC+GGG | 0.378032 | 5_2:-69607393 | None:intergenic |
| TAGTTATGTGTTTGGAATGA+AGG | 0.379858 | 5_2:-69604054 | None:intergenic |
| TCAACTGGAATTAGTAGTTT+GGG | 0.396190 | 5_2:+69608379 | Msa0784850:CDS |
| GAGAATTTGTAACTAAGAAC+AGG | 0.400975 | 5_2:+69607200 | Msa0784850:CDS |
| GCCCATACACAGAAGTAAAT+AGG | 0.401306 | 5_2:-69608435 | None:intergenic |
| AGACTTTCTGATGGAGGATT+GGG | 0.401771 | 5_2:-69606099 | None:intergenic |
| TTTCTTGTCGCAAATGCAAC+TGG | 0.403236 | 5_2:+69607365 | Msa0784850:CDS |
| CAACTGGTGCACCCCGTTAT+GGG | 0.404001 | 5_2:+69607381 | Msa0784850:CDS |
| CTAATGCAGCATCCTCTGTT+AGG | 0.406577 | 5_2:+69608748 | Msa0784850:three_prime_UTR |
| TGGTGGTCTGTGTGGTGGAC+GGG | 0.410126 | 5_2:+69607091 | Msa0784850:CDS |
| AAGACTTTCTGATGGAGGAT+TGG | 0.418259 | 5_2:-69606100 | None:intergenic |
| ATTTGATTGTAGAATATTGA+AGG | 0.420517 | 5_2:+69608796 | Msa0784850:three_prime_UTR |
| GTCGGATTGAACAGAGGTTT+CGG | 0.421732 | 5_2:+69604467 | Msa0784850:CDS |
| CCTGATTTAGCAAATTCCTT+AGG | 0.422121 | 5_2:+69608697 | Msa0784850:three_prime_UTR |
| AAATTACCTTTAACCCATAA+CGG | 0.425637 | 5_2:-69607394 | None:intergenic |
| TGCGAATTCCACCGAAGAGC+AGG | 0.435917 | 5_2:-69606286 | None:intergenic |
| TTCTGATCCAATCAATCAAA+CGG | 0.436471 | 5_2:+69604199 | Msa0784850:five_prime_UTR |
| GAAGCTCCGGTTCGAAATGA+AGG | 0.448999 | 5_2:+69604342 | Msa0784850:five_prime_UTR |
| ATAGTCGCAATGTCTGGTTT+TGG | 0.454922 | 5_2:+69608494 | Msa0784850:CDS |
| TGTCCATTGGTTAGATTCGT+TGG | 0.458659 | 5_2:+69606359 | Msa0784850:CDS |
| ACAGGTAAAATATATGAGAT+TGG | 0.461138 | 5_2:+69608355 | Msa0784850:intron |
| GACAACAACAAATTTAGATA+TGG | 0.462661 | 5_2:+69607064 | Msa0784850:CDS |
| ATGGTGGTCTGTGTGGTGGA+CGG | 0.464395 | 5_2:+69607090 | Msa0784850:CDS |
| TGTCATATTTCCCTGCTCTT+CGG | 0.466320 | 5_2:+69606275 | Msa0784850:CDS |
| TTTCACTGACGTATATACTA+AGG | 0.468030 | 5_2:-69608464 | None:intergenic |
| CCGTTGATAGTCGCAATGTC+TGG | 0.468930 | 5_2:+69608488 | Msa0784850:CDS |
| TTCCCAGTTTCACTGATTCA+AGG | 0.472796 | 5_2:+69604626 | Msa0784850:CDS |
| ACAAATTCTCTAATTGATGA+TGG | 0.477812 | 5_2:-69607187 | None:intergenic |
| GTTGATGCACGCAATATGAA+TGG | 0.489426 | 5_2:-69604104 | None:intergenic |
| TTTGTGAAAGAATGCTGCCT+TGG | 0.491658 | 5_2:-69607134 | None:intergenic |
| AGAAAACCTTCATTTCGAAC+CGG | 0.493120 | 5_2:-69604348 | None:intergenic |
| TTTGATTTGTATTACCATGA+TGG | 0.496500 | 5_2:-69608202 | None:intergenic |
| ACCTATTTACTTCTGTGTAT+GGG | 0.504941 | 5_2:+69608434 | Msa0784850:CDS |
| ACAAATCCCACCATTGCATC+CGG | 0.508793 | 5_2:-69606330 | None:intergenic |
| TCAGTGAAACTGGGAATTTG+AGG | 0.510055 | 5_2:-69604619 | None:intergenic |
| CTTAAACTAATCAGAAGCTC+CGG | 0.521536 | 5_2:+69604329 | Msa0784850:five_prime_UTR |
| CATATTTCCCTGCTCTTCGG+TGG | 0.522551 | 5_2:+69606278 | Msa0784850:CDS |
| AATGAAGAAACAGAGGAAGA+TGG | 0.522661 | 5_2:-69604176 | None:intergenic |
| GATTTGTACCTCGTGTCCAT+TGG | 0.522707 | 5_2:+69606346 | Msa0784850:CDS |
| TGATGTTTGGCAAAGTGCAC+CGG | 0.530100 | 5_2:+69606311 | Msa0784850:CDS |
| GGAGCTGTTGGTTGAACCGT+CGG | 0.530590 | 5_2:+69604449 | Msa0784850:CDS |
| TGGTTAAGGAGACATGAATC+AGG | 0.532444 | 5_2:-69604251 | None:intergenic |
| CAGTGAAACTGGGAATTTGA+GGG | 0.535082 | 5_2:-69604618 | None:intergenic |
| TTGGATCATGAAAATGGAAG+AGG | 0.538581 | 5_2:-69604293 | None:intergenic |
| AACAACAAATTTAGATATGG+TGG | 0.541211 | 5_2:+69607067 | Msa0784850:CDS |
| AAGTGCACCGGATGCAATGG+TGG | 0.544682 | 5_2:+69606323 | Msa0784850:CDS |
| TGTGTTTGGAATGAAGGAGA+GGG | 0.545745 | 5_2:-69604048 | None:intergenic |
| CTAAGGAATTTGCTAAATCA+GGG | 0.554337 | 5_2:-69608696 | None:intergenic |
| TTTAGAAGACTTTCTGATGG+AGG | 0.564085 | 5_2:-69606105 | None:intergenic |
| CCAGACATTGCGACTATCAA+CGG | 0.564873 | 5_2:-69608488 | None:intergenic |
| ATGGTGGATGGTGGTCTGTG+TGG | 0.564923 | 5_2:+69607083 | Msa0784850:CDS |
| GTGGATGGTGGTCTGTGTGG+TGG | 0.565684 | 5_2:+69607086 | Msa0784850:CDS |
| ATGTGTTTGGAATGAAGGAG+AGG | 0.584204 | 5_2:-69604049 | None:intergenic |
| TTGATTTGTATTACCATGAT+GGG | 0.585254 | 5_2:-69608201 | None:intergenic |
| CATAAAACCTAACATTAGCA+TGG | 0.586186 | 5_2:-69608175 | None:intergenic |
| ACGGACGATATGTGAAGTTG+AGG | 0.586320 | 5_2:+69606163 | Msa0784850:CDS |
| TATTAGCGGCGGTGATGAGA+GGG | 0.587978 | 5_2:+69604428 | Msa0784850:exon |
| CGGTGATGAGAGGGAGCTGT+TGG | 0.589133 | 5_2:+69604437 | Msa0784850:exon |
| TTATTAGCGGCGGTGATGAG+AGG | 0.597155 | 5_2:+69604427 | Msa0784850:exon |
| TTCACTGACGTATATACTAA+GGG | 0.597837 | 5_2:-69608463 | None:intergenic |
| AGGAGACATGAATCAGGTGA+TGG | 0.598172 | 5_2:-69604245 | None:intergenic |
| ACAAATTTAGATATGGTGGA+TGG | 0.602492 | 5_2:+69607071 | Msa0784850:CDS |
| TATTACAAGAAATCAACCTA+AGG | 0.609014 | 5_2:-69608713 | None:intergenic |
| ATACCAACGAATCTAACCAA+TGG | 0.611009 | 5_2:-69606362 | None:intergenic |
| ATATAGCATGGTGCTCTCCA+AGG | 0.616926 | 5_2:+69607117 | Msa0784850:CDS |
| GCGAATTCCACCGAAGAGCA+GGG | 0.618715 | 5_2:-69606285 | None:intergenic |
| ATCAGAAAATGAAGAAACAG+AGG | 0.621868 | 5_2:-69604183 | None:intergenic |
| GTTTGGGAGGTCATAGTGAA+CGG | 0.624381 | 5_2:+69608395 | Msa0784850:CDS |
| TTTGGAATGAAGGAGAGGGA+AGG | 0.626473 | 5_2:-69604044 | None:intergenic |
| TATTTACTTCTGTGTATGGG+CGG | 0.627886 | 5_2:+69608437 | Msa0784850:CDS |
| TTGAGTCAGTACATATTGTG+TGG | 0.629828 | 5_2:+69606070 | Msa0784850:CDS |
| AACCTTGAATCAGTGAAACT+GGG | 0.631242 | 5_2:-69604628 | None:intergenic |
| ACTGGAATTAGTAGTTTGGG+AGG | 0.632754 | 5_2:+69608382 | Msa0784850:CDS |
| GCAAAGTGCACCGGATGCAA+TGG | 0.638093 | 5_2:+69606320 | Msa0784850:CDS |
| AGTGCACCGGATGCAATGGT+GGG | 0.640002 | 5_2:+69606324 | Msa0784850:CDS |
| TAAACAATAATTGACAACAG+TGG | 0.650312 | 5_2:-69608557 | None:intergenic |
| AATTTAGATATGGTGGATGG+TGG | 0.653603 | 5_2:+69607074 | Msa0784850:CDS |
| ATAAATGACTAACGTGAACG+TGG | 0.664051 | 5_2:-69608630 | None:intergenic |
| ATTACCTTTAACCCATAACG+GGG | 0.665121 | 5_2:-69607392 | None:intergenic |
| GATCTTGGCTGATTTAACGG+TGG | 0.667058 | 5_2:-69604503 | None:intergenic |
| GGTGATGGATGACACGTGGA+TGG | 0.668912 | 5_2:-69604230 | None:intergenic |
| TGAACCGTCGGATTGAACAG+AGG | 0.670462 | 5_2:+69604461 | Msa0784850:CDS |
| ATATGTACTGACTCAAGTCG+AGG | 0.675049 | 5_2:-69606063 | None:intergenic |
| AGTGAAACTGGGAATTTGAG+GGG | 0.676257 | 5_2:-69604617 | None:intergenic |
| GTAAAGTCCAAATCTAGAGA+CGG | 0.683801 | 5_2:+69606144 | Msa0784850:CDS |
| GAAACCTCTGTTCAATCCGA+CGG | 0.684402 | 5_2:-69604465 | None:intergenic |
| ATCAGGTGATGGATGACACG+TGG | 0.707701 | 5_2:-69604234 | None:intergenic |
| GAATCTAACCAATGGACACG+AGG | 0.709906 | 5_2:-69606354 | None:intergenic |
| ATTCTATTGTAATGAACACG+TGG | 0.719028 | 5_2:+69605992 | Msa0784850:CDS |
| GTTGAGGTTTGATATCAACA+CGG | 0.722201 | 5_2:+69606179 | Msa0784850:CDS |
| GTGGACGGGTACATATAGCA+TGG | 0.778264 | 5_2:+69607105 | Msa0784850:CDS |
| TAGATTTGGACTTTACAACG+TGG | 0.788272 | 5_2:-69606137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAATACAAAATTTATTTT+TGG | + | chr5_2:69604766-69604785 | Msa0784850:intron | 10.0% |
| !!! | CTTTATTTAGTATTTAAATT+TGG | + | chr5_2:69605039-69605058 | Msa0784850:intron | 10.0% |
| !!! | GACTTTTAATTTTTTTTTTT+TGG | + | chr5_2:69605385-69605404 | Msa0784850:intron | 10.0% |
| !! | TAATAGATTTAAAGAAATTA+AGG | + | chr5_2:69606215-69606234 | Msa0784850:CDS | 10.0% |
| !! | TTAAAAAAAAAAAACTTGTA+AGG | + | chr5_2:69607003-69607022 | Msa0784850:intron | 10.0% |
| !! | AAATAAATAAAAAATTAGCA+GGG | - | chr5_2:69607248-69607267 | None:intergenic | 10.0% |
| !! | TAAATAAATAAAAAATTAGC+AGG | - | chr5_2:69607249-69607268 | None:intergenic | 10.0% |
| !! | ATATGTTTATCTTATAATTA+AGG | + | chr5_2:69607917-69607936 | Msa0784850:intron | 10.0% |
| !!! | AATTTTTATAGTTATGTGTT+TGG | - | chr5_2:69604065-69604084 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAACCAAAAG+CGG | - | chr5_2:69604394-69604413 | None:intergenic | 15.0% |
| !!! | AATACAAAATTTATTTTTGG+TGG | + | chr5_2:69604769-69604788 | Msa0784850:intron | 15.0% |
| !!! | ATACAAAATTTATTTTTGGT+GGG | + | chr5_2:69604770-69604789 | Msa0784850:intron | 15.0% |
| !! | ATAGGAAATATAAATAGAAA+GGG | + | chr5_2:69604933-69604952 | Msa0784850:intron | 15.0% |
| !!! | TTTAATTTGAAGAGTAAAAT+AGG | + | chr5_2:69605008-69605027 | Msa0784850:intron | 15.0% |
| !!! | TTAATTTGAAGAGTAAAATA+GGG | + | chr5_2:69605009-69605028 | Msa0784850:intron | 15.0% |
| !! | AAAAAAAAAATTAAAAGTCC+AGG | - | chr5_2:69605384-69605403 | None:intergenic | 15.0% |
| !! | GAAGTGAATTTATATATATT+TGG | + | chr5_2:69605561-69605580 | Msa0784850:intron | 15.0% |
| !! | GTAAAAAAAAAATAGATGTT+TGG | - | chr5_2:69605713-69605732 | None:intergenic | 15.0% |
| !! | ATTTAAAGAAATTAAGGATT+TGG | + | chr5_2:69606221-69606240 | Msa0784850:CDS | 15.0% |
| !! | AATAAATAAAAAATTAGCAG+GGG | - | chr5_2:69607247-69607266 | None:intergenic | 15.0% |
| !! | TTATTGATCAAATAACAAAA+TGG | - | chr5_2:69607303-69607322 | None:intergenic | 15.0% |
| !!! | AGTTTTGTAGTTTCTATTTT+AGG | + | chr5_2:69604724-69604743 | Msa0784850:intron | 20.0% |
| !!! | GTTTTGTAGTTTCTATTTTA+GGG | + | chr5_2:69604725-69604744 | Msa0784850:intron | 20.0% |
| !!! | TAGTTTCGGTTTTTTTTTTA+TGG | + | chr5_2:69604837-69604856 | Msa0784850:intron | 20.0% |
| !! | GAATTTCTATATATGTGTTT+GGG | + | chr5_2:69604859-69604878 | Msa0784850:intron | 20.0% |
| !!! | TTTTTTTGTTTGTTTTGCAT+AGG | + | chr5_2:69604915-69604934 | Msa0784850:intron | 20.0% |
| !! | CATAGGAAATATAAATAGAA+AGG | + | chr5_2:69604932-69604951 | Msa0784850:intron | 20.0% |
| !!! | AAGGGATTTTGTATATAATA+AGG | + | chr5_2:69604951-69604970 | Msa0784850:intron | 20.0% |
| !!! | TTTGGAATGAATATATAACA+AGG | + | chr5_2:69605057-69605076 | Msa0784850:intron | 20.0% |
| !!! | GTCATTTTCTCAAATATTAT+TGG | + | chr5_2:69605237-69605256 | Msa0784850:intron | 20.0% |
| !!! | TTTTGTTCAAATTTGTATAC+TGG | + | chr5_2:69605343-69605362 | Msa0784850:intron | 20.0% |
| !! | TGATTATGTATGATTTGATT+TGG | + | chr5_2:69605524-69605543 | Msa0784850:intron | 20.0% |
| !!! | CTAAAATTTTACATTGAACT+TGG | - | chr5_2:69605604-69605623 | None:intergenic | 20.0% |
| !! | TAACAATAAGAGATAAAAAG+TGG | - | chr5_2:69605649-69605668 | None:intergenic | 20.0% |
| !! | TTAAAAGGTAAATACTATTG+GGG | - | chr5_2:69606616-69606635 | None:intergenic | 20.0% |
| !! | CTTAAAAGGTAAATACTATT+GGG | - | chr5_2:69606617-69606636 | None:intergenic | 20.0% |
| !! | TCTTAAAAGGTAAATACTAT+TGG | - | chr5_2:69606618-69606637 | None:intergenic | 20.0% |
| !!! | TTTCATGCTTAATTTTGAAA+TGG | - | chr5_2:69606696-69606715 | None:intergenic | 20.0% |
| !!! | GTGTTATTTTTGTTGTTTTA+TGG | - | chr5_2:69606727-69606746 | None:intergenic | 20.0% |
| !! | ATAAATAAAAAATTAGCAGG+GGG | - | chr5_2:69607246-69607265 | None:intergenic | 20.0% |
| !! | AATAATTCAAATGATTTACC+AGG | + | chr5_2:69607318-69607337 | Msa0784850:intron | 20.0% |
| !! | CGTTCAATAATTAAAAGATA+CGG | - | chr5_2:69607427-69607446 | None:intergenic | 20.0% |
| !!! | CGTATCTTTTAATTATTGAA+CGG | + | chr5_2:69607425-69607444 | Msa0784850:intron | 20.0% |
| !!! | GTATCTTTTAATTATTGAAC+GGG | + | chr5_2:69607426-69607445 | Msa0784850:intron | 20.0% |
| !!! | ACATTTGTAAGATTGATTTA+TGG | + | chr5_2:69607556-69607575 | Msa0784850:intron | 20.0% |
| !! | TAATTAAGGAAGTTAAAGTA+TGG | + | chr5_2:69607931-69607950 | Msa0784850:intron | 20.0% |
| !! | GGTTTCAAAAATAAATTTCA+TGG | - | chr5_2:69608063-69608082 | None:intergenic | 20.0% |
| !! | TATATATGATGTTTACATTG+TGG | + | chr5_2:69608318-69608337 | Msa0784850:intron | 20.0% |
| !!! | ATATATTTTACCTGTAACAA+AGG | - | chr5_2:69608350-69608369 | None:intergenic | 20.0% |
| !! | ATTTGATTGTAGAATATTGA+AGG | + | chr5_2:69608796-69608815 | Msa0784850:three_prime_UTR | 20.0% |
| !!! | TTTAAGATTTTAACGTGTCT+TGG | - | chr5_2:69604315-69604334 | None:intergenic | 25.0% |
| !!! | AGAGATTTTGTTGTTATTAG+CGG | + | chr5_2:69604414-69604433 | Msa0784850:five_prime_UTR | 25.0% |
| !!! | GGAAATGTTTTTTTTGTTGT+TGG | + | chr5_2:69604805-69604824 | Msa0784850:intron | 25.0% |
| ! | GTTGGAAAAATACATAGTTT+CGG | + | chr5_2:69604823-69604842 | Msa0784850:intron | 25.0% |
| ! | GGAATTTCTATATATGTGTT+TGG | + | chr5_2:69604858-69604877 | Msa0784850:intron | 25.0% |
| ! | TGTAATTATATGTGTCATGT+TGG | - | chr5_2:69605208-69605227 | None:intergenic | 25.0% |
| ! | ATATCTATGAAGCATAGATA+CGG | - | chr5_2:69605292-69605311 | None:intergenic | 25.0% |
| !! | TGGATAATTTAGTGTGTTTT+TGG | + | chr5_2:69605469-69605488 | Msa0784850:intron | 25.0% |
| ! | GTTTAAATTCATGATTGAGA+GGG | - | chr5_2:69605771-69605790 | None:intergenic | 25.0% |
| ! | TGTTTAAATTCATGATTGAG+AGG | - | chr5_2:69605772-69605791 | None:intergenic | 25.0% |
| ! | TCTCAATCATGAATTTAAAC+AGG | + | chr5_2:69605771-69605790 | Msa0784850:intron | 25.0% |
| !! | ATAAACAACAATTAGTTCTC+TGG | - | chr5_2:69605951-69605970 | None:intergenic | 25.0% |
| !!! | TATTTTAGAAGACTTTCTGA+TGG | - | chr5_2:69606111-69606130 | None:intergenic | 25.0% |
| ! | TCAAGGATAATTGAAAATCA+TGG | - | chr5_2:69606417-69606436 | None:intergenic | 25.0% |
| ! | AATGTGTAGTCAAAATATCA+AGG | - | chr5_2:69606434-69606453 | None:intergenic | 25.0% |
| ! | TGTGAATAACTAATTAAGCT+TGG | + | chr5_2:69606499-69606518 | Msa0784850:intron | 25.0% |
| ! | TTGCAAAACTACATCTTAAA+AGG | - | chr5_2:69606631-69606650 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTTATGGCAATA+AGG | - | chr5_2:69606719-69606738 | None:intergenic | 25.0% |
| ! | GACAACAACAAATTTAGATA+TGG | + | chr5_2:69607064-69607083 | Msa0784850:CDS | 25.0% |
| ! | AACAACAAATTTAGATATGG+TGG | + | chr5_2:69607067-69607086 | Msa0784850:CDS | 25.0% |
| ! | ACAAATTCTCTAATTGATGA+TGG | - | chr5_2:69607190-69607209 | None:intergenic | 25.0% |
| ! | TGATCAAATAACAAAATGGT+TGG | - | chr5_2:69607299-69607318 | None:intergenic | 25.0% |
| ! | AAATTACCTTTAACCCATAA+CGG | - | chr5_2:69607397-69607416 | None:intergenic | 25.0% |
| ! | ACTAATCATGTATCATTCAT+TGG | - | chr5_2:69607589-69607608 | None:intergenic | 25.0% |
| ! | TGAATGATACATGATTAGTA+TGG | + | chr5_2:69607590-69607609 | Msa0784850:intron | 25.0% |
| ! | CAATGAAGAATATGAAAATG+TGG | - | chr5_2:69607638-69607657 | None:intergenic | 25.0% |
| !! | CACATTTTCATATTCTTCAT+TGG | + | chr5_2:69607636-69607655 | Msa0784850:intron | 25.0% |
| ! | AAAGTTATAGCAATAGCAAA+AGG | + | chr5_2:69607758-69607777 | Msa0784850:intron | 25.0% |
| !! | TATCGTGATTTCATTTGTTT+TGG | + | chr5_2:69608021-69608040 | Msa0784850:intron | 25.0% |
| !!! | TTGATTTGTATTACCATGAT+GGG | - | chr5_2:69608204-69608223 | None:intergenic | 25.0% |
| !!! | TTTGATTTGTATTACCATGA+TGG | - | chr5_2:69608205-69608224 | None:intergenic | 25.0% |
| ! | ACAGGTAAAATATATGAGAT+TGG | + | chr5_2:69608355-69608374 | Msa0784850:intron | 25.0% |
| ! | TAAACAATAATTGACAACAG+TGG | - | chr5_2:69608560-69608579 | None:intergenic | 25.0% |
| !!! | TATACACAATTCTTGCTTTT+TGG | + | chr5_2:69608673-69608692 | Msa0784850:three_prime_UTR | 25.0% |
| ! | TATTACAAGAAATCAACCTA+AGG | - | chr5_2:69608716-69608735 | None:intergenic | 25.0% |
| ! | TAGTTATGTGTTTGGAATGA+AGG | - | chr5_2:69604057-69604076 | None:intergenic | 30.0% |
| ATCAGAAAATGAAGAAACAG+AGG | - | chr5_2:69604186-69604205 | None:intergenic | 30.0% | |
| TTCTGATCCAATCAATCAAA+CGG | + | chr5_2:69604199-69604218 | Msa0784850:five_prime_UTR | 30.0% | |
| ! | TTTATTGCCGTTTGATTGAT+TGG | - | chr5_2:69604209-69604228 | None:intergenic | 30.0% |
| !!! | TTTGTTTTCGTTGATGGTTA+AGG | - | chr5_2:69604268-69604287 | None:intergenic | 30.0% |
| AAAAAAAACCAAAAGCGGTT+CGG | - | chr5_2:69604389-69604408 | None:intergenic | 30.0% | |
| ! | CTGGTTCAAGTTTCTTATTA+TGG | + | chr5_2:69604578-69604597 | Msa0784850:CDS | 30.0% |
| ! | TTTGGTGGGAAATTCTTTTA+TGG | + | chr5_2:69604784-69604803 | Msa0784850:intron | 30.0% |
| !! | GTTTTATTGCCTTGATTTGA+AGG | + | chr5_2:69604973-69604992 | Msa0784850:intron | 30.0% |
| TGAAGAGTAAAATAGGGAAA+TGG | + | chr5_2:69605015-69605034 | Msa0784850:intron | 30.0% | |
| ! | TATAGATTGTAACGAGCTTT+TGG | + | chr5_2:69605094-69605113 | Msa0784850:intron | 30.0% |
| TATGAAGCATATATACTCCT+CGG | + | chr5_2:69605141-69605160 | Msa0784850:intron | 30.0% | |
| AGTGATCATTTGATCAACTA+CGG | + | chr5_2:69605420-69605439 | Msa0784850:intron | 30.0% | |
| TTACATTGAACTTGGTTTCA+GGG | - | chr5_2:69605596-69605615 | None:intergenic | 30.0% | |
| TTTACATTGAACTTGGTTTC+AGG | - | chr5_2:69605597-69605616 | None:intergenic | 30.0% | |
| AGAGATAAAAAGTGGATCTT+GGG | - | chr5_2:69605641-69605660 | None:intergenic | 30.0% | |
| AAGAGATAAAAAGTGGATCT+TGG | - | chr5_2:69605642-69605661 | None:intergenic | 30.0% | |
| !!! | TTTTATTTTCATGAGTGCTG+AGG | + | chr5_2:69605908-69605927 | Msa0784850:intron | 30.0% |
| GTTGTTTATTCTTTGTTCAC+AGG | + | chr5_2:69605962-69605981 | Msa0784850:intron | 30.0% | |
| TTATTCTTTGTTCACAGGAA+AGG | + | chr5_2:69605967-69605986 | Msa0784850:intron | 30.0% | |
| ATTCTATTGTAATGAACACG+TGG | + | chr5_2:69605992-69606011 | Msa0784850:CDS | 30.0% | |
| GTAAATACTATTGGGGATTA+TGG | - | chr5_2:69606609-69606628 | None:intergenic | 30.0% | |
| GCATACTATTGTGAAACATA+TGG | + | chr5_2:69606661-69606680 | Msa0784850:intron | 30.0% | |
| TGCAAGAACATTGAATAACT+TGG | - | chr5_2:69607037-69607056 | None:intergenic | 30.0% | |
| TATTCAATGTTCTTGCAGAA+TGG | + | chr5_2:69607040-69607059 | Msa0784850:intron | 30.0% | |
| ! | ACAAATTTAGATATGGTGGA+TGG | + | chr5_2:69607071-69607090 | Msa0784850:CDS | 30.0% |
| GAGAATTTGTAACTAAGAAC+AGG | + | chr5_2:69607200-69607219 | Msa0784850:CDS | 30.0% | |
| AATTACCTTTAACCCATAAC+GGG | - | chr5_2:69607396-69607415 | None:intergenic | 30.0% | |
| CAATCTTACAAATGTCAGAA+AGG | - | chr5_2:69607551-69607570 | None:intergenic | 30.0% | |
| AATAAAGGAACAAGAAGTCA+AGG | - | chr5_2:69607810-69607829 | None:intergenic | 30.0% | |
| ACTAATTGCTTCAATGTACA+GGG | - | chr5_2:69607836-69607855 | None:intergenic | 30.0% | |
| TACTAATTGCTTCAATGTAC+AGG | - | chr5_2:69607837-69607856 | None:intergenic | 30.0% | |
| AGATTATACAAAGCCTAACA+AGG | - | chr5_2:69608135-69608154 | None:intergenic | 30.0% | |
| CATAAAACCTAACATTAGCA+TGG | - | chr5_2:69608178-69608197 | None:intergenic | 30.0% | |
| ATATATGAGATTGGATCAAC+TGG | + | chr5_2:69608364-69608383 | Msa0784850:CDS | 30.0% | |
| ATCAACTGGAATTAGTAGTT+TGG | + | chr5_2:69608378-69608397 | Msa0784850:CDS | 30.0% | |
| TCAACTGGAATTAGTAGTTT+GGG | + | chr5_2:69608379-69608398 | Msa0784850:CDS | 30.0% | |
| AACCTATTTACTTCTGTGTA+TGG | + | chr5_2:69608433-69608452 | Msa0784850:CDS | 30.0% | |
| ACCTATTTACTTCTGTGTAT+GGG | + | chr5_2:69608434-69608453 | Msa0784850:CDS | 30.0% | |
| TTCACTGACGTATATACTAA+GGG | - | chr5_2:69608466-69608485 | None:intergenic | 30.0% | |
| TTTCACTGACGTATATACTA+AGG | - | chr5_2:69608467-69608486 | None:intergenic | 30.0% | |
| !! | CTAAGGAATTTGCTAAATCA+GGG | - | chr5_2:69608699-69608718 | None:intergenic | 30.0% |
| !! | AGATGGTGTTTTTGTGAGAA+CGG | - | chr5_2:69604162-69604181 | None:intergenic | 35.0% |
| AATGAAGAAACAGAGGAAGA+TGG | - | chr5_2:69604179-69604198 | None:intergenic | 35.0% | |
| !! | GATTCGTTTGTTTTCGTTGA+TGG | - | chr5_2:69604274-69604293 | None:intergenic | 35.0% |
| TTGGATCATGAAAATGGAAG+AGG | - | chr5_2:69604296-69604315 | None:intergenic | 35.0% | |
| CTTAAACTAATCAGAAGCTC+CGG | + | chr5_2:69604329-69604348 | Msa0784850:five_prime_UTR | 35.0% | |
| AGAAAACCTTCATTTCGAAC+CGG | - | chr5_2:69604351-69604370 | None:intergenic | 35.0% | |
| ! | GTTCGAAATGAAGGTTTTCT+TGG | + | chr5_2:69604351-69604370 | Msa0784850:five_prime_UTR | 35.0% |
| !!! | GATTTTGTTGTTATTAGCGG+CGG | + | chr5_2:69604417-69604436 | Msa0784850:five_prime_UTR | 35.0% |
| ! | CTTGATCTTGGCTGATTTAA+CGG | - | chr5_2:69604509-69604528 | None:intergenic | 35.0% |
| CAAAAACAGAAGCTTGATCT+TGG | - | chr5_2:69604521-69604540 | None:intergenic | 35.0% | |
| AACCTTGAATCAGTGAAACT+GGG | - | chr5_2:69604631-69604650 | None:intergenic | 35.0% | |
| ! | TTTGGGACTAAGATTCTGTT+TGG | + | chr5_2:69604876-69604895 | Msa0784850:intron | 35.0% |
| TTGGGACTAAGATTCTGTTT+GGG | + | chr5_2:69604877-69604896 | Msa0784850:intron | 35.0% | |
| TAGCACTAACCTTCAAATCA+AGG | - | chr5_2:69604985-69605004 | None:intergenic | 35.0% | |
| GTAGTTGATCAAATGATCAC+TGG | - | chr5_2:69605421-69605440 | None:intergenic | 35.0% | |
| ATTTGATCAACTACGGAGTT+CGG | + | chr5_2:69605427-69605446 | Msa0784850:intron | 35.0% | |
| CTTTCAAAGTTAACTTACCC+TGG | + | chr5_2:69605830-69605849 | Msa0784850:intron | 35.0% | |
| TTGAGTCAGTACATATTGTG+TGG | + | chr5_2:69606070-69606089 | Msa0784850:CDS | 35.0% | |
| TTTAGAAGACTTTCTGATGG+AGG | - | chr5_2:69606108-69606127 | None:intergenic | 35.0% | |
| TAGATTTGGACTTTACAACG+TGG | - | chr5_2:69606140-69606159 | None:intergenic | 35.0% | |
| GTAAAGTCCAAATCTAGAGA+CGG | + | chr5_2:69606144-69606163 | Msa0784850:CDS | 35.0% | |
| GTTGAGGTTTGATATCAACA+CGG | + | chr5_2:69606179-69606198 | Msa0784850:CDS | 35.0% | |
| TGGAATTCGCATTTGATGTT+TGG | + | chr5_2:69606298-69606317 | Msa0784850:CDS | 35.0% | |
| ATACCAACGAATCTAACCAA+TGG | - | chr5_2:69606365-69606384 | None:intergenic | 35.0% | |
| GTTAGATTCGTTGGTATGTA+TGG | + | chr5_2:69606368-69606387 | Msa0784850:intron | 35.0% | |
| ! | TACTTTTATGCCTCTGCTTT+TGG | + | chr5_2:69606456-69606475 | Msa0784850:intron | 35.0% |
| !!! | TGTTTTAGTTCCAAAAGCAG+AGG | - | chr5_2:69606469-69606488 | None:intergenic | 35.0% |
| TAACTAATTAAGCTTGGAGC+AGG | + | chr5_2:69606505-69606524 | Msa0784850:intron | 35.0% | |
| AACTAATTAAGCTTGGAGCA+GGG | + | chr5_2:69606506-69606525 | Msa0784850:intron | 35.0% | |
| TAGCAGTTCAAACAAAGAAC+AGG | - | chr5_2:69606569-69606588 | None:intergenic | 35.0% | |
| AGGTCCTCATATAACAATGA+GGG | - | chr5_2:69606790-69606809 | None:intergenic | 35.0% | |
| CACAACAAGGACAAAATAAC+AGG | - | chr5_2:69606810-69606829 | None:intergenic | 35.0% | |
| !!! | CTGTTATTTTGTCCTTGTTG+TGG | + | chr5_2:69606808-69606827 | Msa0784850:intron | 35.0% |
| TTTCAGTTAGATCCACAACA+AGG | - | chr5_2:69606823-69606842 | None:intergenic | 35.0% | |
| TTGTTGTGGATCTAACTGAA+AGG | + | chr5_2:69606822-69606841 | Msa0784850:intron | 35.0% | |
| TATCTCTCTGATCTGAACAT+GGG | - | chr5_2:69606977-69606996 | None:intergenic | 35.0% | |
| TTATCTCTCTGATCTGAACA+TGG | - | chr5_2:69606978-69606997 | None:intergenic | 35.0% | |
| !! | AATTTAGATATGGTGGATGG+TGG | + | chr5_2:69607074-69607093 | Msa0784850:CDS | 35.0% |
| TGCAATATCTTCACAATTCC+TGG | - | chr5_2:69607339-69607358 | None:intergenic | 35.0% | |
| ATTACCTTTAACCCATAACG+GGG | - | chr5_2:69607395-69607414 | None:intergenic | 35.0% | |
| AATGTCAGAAAGGAGAAAGA+CGG | - | chr5_2:69607541-69607560 | None:intergenic | 35.0% | |
| AACACCATCTAATCCAAAGA+AGG | - | chr5_2:69607716-69607735 | None:intergenic | 35.0% | |
| CAATGTACAGGGTGTAATAA+AGG | - | chr5_2:69607825-69607844 | None:intergenic | 35.0% | |
| GAAAACATGCTATGATAGCT+AGG | - | chr5_2:69607998-69608017 | None:intergenic | 35.0% | |
| TGAAGTTCCATGCTAATGTT+AGG | + | chr5_2:69608168-69608187 | Msa0784850:intron | 35.0% | |
| AAATCAAACATTGCTCTCGT+TGG | + | chr5_2:69608217-69608236 | Msa0784850:intron | 35.0% | |
| CACATGCATCTTCTTTGTAT+GGG | - | chr5_2:69608268-69608287 | None:intergenic | 35.0% | |
| ACACATGCATCTTCTTTGTA+TGG | - | chr5_2:69608269-69608288 | None:intergenic | 35.0% | |
| TATTTACTTCTGTGTATGGG+CGG | + | chr5_2:69608437-69608456 | Msa0784850:CDS | 35.0% | |
| ATAAATGACTAACGTGAACG+TGG | - | chr5_2:69608633-69608652 | None:intergenic | 35.0% | |
| !! | CCTAAGGAATTTGCTAAATC+AGG | - | chr5_2:69608700-69608719 | None:intergenic | 35.0% |
| CCTGATTTAGCAAATTCCTT+AGG | + | chr5_2:69608697-69608716 | Msa0784850:three_prime_UTR | 35.0% | |
| ! | TGTGTTTGGAATGAAGGAGA+GGG | - | chr5_2:69604051-69604070 | None:intergenic | 40.0% |
| ! | ATGTGTTTGGAATGAAGGAG+AGG | - | chr5_2:69604052-69604071 | None:intergenic | 40.0% |
| GTTGATGCACGCAATATGAA+TGG | - | chr5_2:69604107-69604126 | None:intergenic | 40.0% | |
| TGGTTAAGGAGACATGAATC+AGG | - | chr5_2:69604254-69604273 | None:intergenic | 40.0% | |
| CGTGTCTTGGATCATGAAAA+TGG | - | chr5_2:69604302-69604321 | None:intergenic | 40.0% | |
| AGTGAAACTGGGAATTTGAG+GGG | - | chr5_2:69604620-69604639 | None:intergenic | 40.0% | |
| CAGTGAAACTGGGAATTTGA+GGG | - | chr5_2:69604621-69604640 | None:intergenic | 40.0% | |
| TCAGTGAAACTGGGAATTTG+AGG | - | chr5_2:69604622-69604641 | None:intergenic | 40.0% | |
| !! | TTCCCAGTTTCACTGATTCA+AGG | + | chr5_2:69604626-69604645 | Msa0784850:CDS | 40.0% |
| GAACCTTGAATCAGTGAAAC+TGG | - | chr5_2:69604632-69604651 | None:intergenic | 40.0% | |
| !! | TTGTAACGAGCTTTTGGTGT+TGG | + | chr5_2:69605100-69605119 | Msa0784850:intron | 40.0% |
| !!! | TGTAACGAGCTTTTGGTGTT+GGG | + | chr5_2:69605101-69605120 | Msa0784850:intron | 40.0% |
| !!! | GCTTTTGGTGTTGGGAATTT+TGG | + | chr5_2:69605109-69605128 | Msa0784850:intron | 40.0% |
| GCATATATACTCCTCGGATT+AGG | + | chr5_2:69605147-69605166 | Msa0784850:intron | 40.0% | |
| ATACGATACATATCCGACAC+CGG | - | chr5_2:69605179-69605198 | None:intergenic | 40.0% | |
| TGGAAGTAGAAACGATTACC+TGG | + | chr5_2:69605363-69605382 | Msa0784850:intron | 40.0% | |
| GATCAGTAATTCGTAGCTGA+TGG | + | chr5_2:69605449-69605468 | Msa0784850:intron | 40.0% | |
| !!! | GTGTGTTTTTGGTCAGTGTT+TGG | + | chr5_2:69605480-69605499 | Msa0784850:intron | 40.0% |
| CTTAAGTCATGCTTGAGAGA+AGG | + | chr5_2:69605732-69605751 | Msa0784850:intron | 40.0% | |
| GAGGGAAACAAAACAGAATC+TGG | + | chr5_2:69605864-69605883 | Msa0784850:intron | 40.0% | |
| !! | ATATGTACTGACTCAAGTCG+AGG | - | chr5_2:69606066-69606085 | None:intergenic | 40.0% |
| AGACTTTCTGATGGAGGATT+GGG | - | chr5_2:69606102-69606121 | None:intergenic | 40.0% | |
| AAGACTTTCTGATGGAGGAT+TGG | - | chr5_2:69606103-69606122 | None:intergenic | 40.0% | |
| ATATCGTCCGTCTCTAGATT+TGG | - | chr5_2:69606154-69606173 | None:intergenic | 40.0% | |
| TGTCATATTTCCCTGCTCTT+CGG | + | chr5_2:69606275-69606294 | Msa0784850:CDS | 40.0% | |
| ! | TGTCCATTGGTTAGATTCGT+TGG | + | chr5_2:69606359-69606378 | Msa0784850:CDS | 40.0% |
| CCTCATATAACAATGAGGGT+CGG | - | chr5_2:69606786-69606805 | None:intergenic | 40.0% | |
| CAGGTCCTCATATAACAATG+AGG | - | chr5_2:69606791-69606810 | None:intergenic | 40.0% | |
| ACTAGCAGCTACTTAAAGCA+TGG | - | chr5_2:69606883-69606902 | None:intergenic | 40.0% | |
| TTTGTGAAAGAATGCTGCCT+TGG | - | chr5_2:69607137-69607156 | None:intergenic | 40.0% | |
| TTTCTTGTCGCAAATGCAAC+TGG | + | chr5_2:69607365-69607384 | Msa0784850:CDS | 40.0% | |
| GAGGAACTTCTGAACTAAAC+AGG | - | chr5_2:69607481-69607500 | None:intergenic | 40.0% | |
| !! | GTTTTGAGCTAGTGAAGTTG+AGG | - | chr5_2:69607500-69607519 | None:intergenic | 40.0% |
| ATGTCAGAAAGGAGAAAGAC+GGG | - | chr5_2:69607540-69607559 | None:intergenic | 40.0% | |
| ATCTAATCCAAAGAAGGAGG+GGG | - | chr5_2:69607710-69607729 | None:intergenic | 40.0% | |
| CATCTAATCCAAAGAAGGAG+GGG | - | chr5_2:69607711-69607730 | None:intergenic | 40.0% | |
| CCATCTAATCCAAAGAAGGA+GGG | - | chr5_2:69607712-69607731 | None:intergenic | 40.0% | |
| ACCATCTAATCCAAAGAAGG+AGG | - | chr5_2:69607713-69607732 | None:intergenic | 40.0% | |
| ! | GACTCTTTTGTTCCTTTCTG+TGG | + | chr5_2:69607953-69607972 | Msa0784850:intron | 40.0% |
| CTAGGCATCATTGCACAATT+TGG | - | chr5_2:69607980-69607999 | None:intergenic | 40.0% | |
| ACAACTTGTCGCAAAACACT+GGG | - | chr5_2:69608099-69608118 | None:intergenic | 40.0% | |
| ATGGGCGACATGTATTAACA+TGG | - | chr5_2:69608250-69608269 | None:intergenic | 40.0% | |
| ! | GTGGATTTTGCCTTTGTTAC+AGG | + | chr5_2:69608337-69608356 | Msa0784850:intron | 40.0% |
| ACTGGAATTAGTAGTTTGGG+AGG | + | chr5_2:69608382-69608401 | Msa0784850:CDS | 40.0% | |
| GCCCATACACAGAAGTAAAT+AGG | - | chr5_2:69608438-69608457 | None:intergenic | 40.0% | |
| !! | ATAGTCGCAATGTCTGGTTT+TGG | + | chr5_2:69608494-69608513 | Msa0784850:CDS | 40.0% |
| !!! | CAATGTCTGGTTTTGGTGAT+TGG | + | chr5_2:69608501-69608520 | Msa0784850:exon | 40.0% |
| !! | GACAAAAAGCATCCTAACAG+AGG | - | chr5_2:69608763-69608782 | None:intergenic | 40.0% |
| ! | TTTGGAATGAAGGAGAGGGA+AGG | - | chr5_2:69604047-69604066 | None:intergenic | 45.0% |
| !!! | GAACGGTGGTGTTTTTGGTT+CGG | - | chr5_2:69604145-69604164 | None:intergenic | 45.0% |
| ! | TGTGAGAACGGTGGTGTTTT+TGG | - | chr5_2:69604150-69604169 | None:intergenic | 45.0% |
| !! | TGGTGTTTTTGTGAGAACGG+TGG | - | chr5_2:69604159-69604178 | None:intergenic | 45.0% |
| AGGAGACATGAATCAGGTGA+TGG | - | chr5_2:69604248-69604267 | None:intergenic | 45.0% | |
| ! | TTACTGAACCGAACCGCTTT+TGG | + | chr5_2:69604378-69604397 | Msa0784850:five_prime_UTR | 45.0% |
| GAAACCTCTGTTCAATCCGA+CGG | - | chr5_2:69604468-69604487 | None:intergenic | 45.0% | |
| GTCGGATTGAACAGAGGTTT+CGG | + | chr5_2:69604467-69604486 | Msa0784850:CDS | 45.0% | |
| ! | GATCTTGGCTGATTTAACGG+TGG | - | chr5_2:69604506-69604525 | None:intergenic | 45.0% |
| ! | CTTCTCGCGTTTTCTTCTAC+TGG | + | chr5_2:69604559-69604578 | Msa0784850:CDS | 45.0% |
| TACGATACATATCCGACACC+GGG | - | chr5_2:69605178-69605197 | None:intergenic | 45.0% | |
| ACGGACGATATGTGAAGTTG+AGG | + | chr5_2:69606163-69606182 | Msa0784850:CDS | 45.0% | |
| TGATGTTTGGCAAAGTGCAC+CGG | + | chr5_2:69606311-69606330 | Msa0784850:CDS | 45.0% | |
| ACAAATCCCACCATTGCATC+CGG | - | chr5_2:69606333-69606352 | None:intergenic | 45.0% | |
| GATTTGTACCTCGTGTCCAT+TGG | + | chr5_2:69606346-69606365 | Msa0784850:CDS | 45.0% | |
| GAATCTAACCAATGGACACG+AGG | - | chr5_2:69606357-69606376 | None:intergenic | 45.0% | |
| TGGGGATTATGGCTGTTAGA+GGG | - | chr5_2:69606598-69606617 | None:intergenic | 45.0% | |
| TTGGGGATTATGGCTGTTAG+AGG | - | chr5_2:69606599-69606618 | None:intergenic | 45.0% | |
| CCGACCCTCATTGTTATATG+AGG | + | chr5_2:69606783-69606802 | Msa0784850:intron | 45.0% | |
| ATATAGCATGGTGCTCTCCA+AGG | + | chr5_2:69607117-69607136 | Msa0784850:CDS | 45.0% | |
| AATTCTTCCCCCTCCTTCTT+TGG | + | chr5_2:69607700-69607719 | Msa0784850:intron | 45.0% | |
| ! | CCCTCCTTCTTTGGATTAGA+TGG | + | chr5_2:69607709-69607728 | Msa0784850:intron | 45.0% |
| AGGAACAAGAAGTCAAGGAC+TGG | - | chr5_2:69607805-69607824 | None:intergenic | 45.0% | |
| GCACAATTTGGTCCACAGAA+AGG | - | chr5_2:69607968-69607987 | None:intergenic | 45.0% | |
| CACAACTTGTCGCAAAACAC+TGG | - | chr5_2:69608100-69608119 | None:intergenic | 45.0% | |
| GTACACAGTCTCACCTTGTT+AGG | + | chr5_2:69608119-69608138 | Msa0784850:intron | 45.0% | |
| !! | AGGTTTTATGCTGCCCATCA+TGG | + | chr5_2:69608188-69608207 | Msa0784850:CDS | 45.0% |
| GTTTGGGAGGTCATAGTGAA+CGG | + | chr5_2:69608395-69608414 | Msa0784850:CDS | 45.0% | |
| CCAGACATTGCGACTATCAA+CGG | - | chr5_2:69608491-69608510 | None:intergenic | 45.0% | |
| CTAATGCAGCATCCTCTGTT+AGG | + | chr5_2:69608748-69608767 | Msa0784850:three_prime_UTR | 45.0% | |
| !!! | ACTTTTAATTTTTTTTTTTT+GGG | + | chr5_2:69605386-69605405 | Msa0784850:intron | 5.0% |
| ! | GGTTCGGAGTCGAGAGATTT+TGG | - | chr5_2:69604129-69604148 | None:intergenic | 50.0% |
| !! | ATCAGGTGATGGATGACACG+TGG | - | chr5_2:69604237-69604256 | None:intergenic | 50.0% |
| ! | GAAGCTCCGGTTCGAAATGA+AGG | + | chr5_2:69604342-69604361 | Msa0784850:five_prime_UTR | 50.0% |
| TTATTAGCGGCGGTGATGAG+AGG | + | chr5_2:69604427-69604446 | Msa0784850:exon | 50.0% | |
| TATTAGCGGCGGTGATGAGA+GGG | + | chr5_2:69604428-69604447 | Msa0784850:exon | 50.0% | |
| TGAACCGTCGGATTGAACAG+AGG | + | chr5_2:69604461-69604480 | Msa0784850:CDS | 50.0% | |
| TACCCTGGAATCAGAGAGAG+AGG | + | chr5_2:69605845-69605864 | Msa0784850:intron | 50.0% | |
| ACCCTGGAATCAGAGAGAGA+GGG | + | chr5_2:69605846-69605865 | Msa0784850:intron | 50.0% | |
| TCCCTCTCTCTCTGATTCCA+GGG | - | chr5_2:69605850-69605869 | None:intergenic | 50.0% | |
| TTCCCTCTCTCTCTGATTCC+AGG | - | chr5_2:69605851-69605870 | None:intergenic | 50.0% | |
| CATATTTCCCTGCTCTTCGG+TGG | + | chr5_2:69606278-69606297 | Msa0784850:CDS | 50.0% | |
| GTGGACGGGTACATATAGCA+TGG | + | chr5_2:69607105-69607124 | Msa0784850:CDS | 50.0% | |
| ! | TGCACCCCGTTATGGGTTAA+AGG | + | chr5_2:69607388-69607407 | Msa0784850:CDS | 50.0% |
| ACACTGGGTAGCATGGTCAT+TGG | - | chr5_2:69608084-69608103 | None:intergenic | 50.0% | |
| TCGCAAAACACTGGGTAGCA+TGG | - | chr5_2:69608091-69608110 | None:intergenic | 50.0% | |
| !! | CCGTTGATAGTCGCAATGTC+TGG | + | chr5_2:69608488-69608507 | Msa0784850:CDS | 50.0% |
| !! | GGTGATGGATGACACGTGGA+TGG | - | chr5_2:69604233-69604252 | None:intergenic | 55.0% |
| ! | GGAGCTGTTGGTTGAACCGT+CGG | + | chr5_2:69604449-69604468 | Msa0784850:CDS | 55.0% |
| GCGAATTCCACCGAAGAGCA+GGG | - | chr5_2:69606288-69606307 | None:intergenic | 55.0% | |
| TGCGAATTCCACCGAAGAGC+AGG | - | chr5_2:69606289-69606308 | None:intergenic | 55.0% | |
| GCAAAGTGCACCGGATGCAA+TGG | + | chr5_2:69606320-69606339 | Msa0784850:CDS | 55.0% | |
| AAGTGCACCGGATGCAATGG+TGG | + | chr5_2:69606323-69606342 | Msa0784850:CDS | 55.0% | |
| AGTGCACCGGATGCAATGGT+GGG | + | chr5_2:69606324-69606343 | Msa0784850:CDS | 55.0% | |
| !! | ATGGTGGATGGTGGTCTGTG+TGG | + | chr5_2:69607083-69607102 | Msa0784850:CDS | 55.0% |
| ! | ATGGTGGTCTGTGTGGTGGA+CGG | + | chr5_2:69607090-69607109 | Msa0784850:CDS | 55.0% |
| CAACTGGTGCACCCCGTTAT+GGG | + | chr5_2:69607381-69607400 | Msa0784850:CDS | 55.0% | |
| CGGTGATGAGAGGGAGCTGT+TGG | + | chr5_2:69604437-69604456 | Msa0784850:exon | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr5_2:69605157-69605176 | Msa0784850:intron | 60.0% |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr5_2:69605163-69605182 | Msa0784850:intron | 60.0% | |
| ! | GTGGATGGTGGTCTGTGTGG+TGG | + | chr5_2:69607086-69607105 | Msa0784850:CDS | 60.0% |
| !! | TGGTGGTCTGTGTGGTGGAC+GGG | + | chr5_2:69607091-69607110 | Msa0784850:CDS | 60.0% |
| GCAACTGGTGCACCCCGTTA+TGG | + | chr5_2:69607380-69607399 | Msa0784850:CDS | 60.0% | |
| ACCGGGACACGCCTAATCCG+AGG | - | chr5_2:69605161-69605180 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 69604039 | 69608833 | 69604039 | ID=Msa0784850;Name=Msa0784850 |
| chr5_2 | mRNA | 69604039 | 69608833 | 69604039 | ID=Msa0784850-mRNA-1;Parent=Msa0784850;Name=Msa0784850-mRNA-1;_AED=0.06;_eAED=0.07;_QI=403|0.6|0.83|1|1|1|6|314|344 |
| chr5_2 | exon | 69604039 | 69604647 | 69604039 | ID=Msa0784850-mRNA-1:exon:20947;Parent=Msa0784850-mRNA-1 |
| chr5_2 | exon | 69605984 | 69606380 | 69605984 | ID=Msa0784850-mRNA-1:exon:20948;Parent=Msa0784850-mRNA-1 |
| chr5_2 | exon | 69607058 | 69607221 | 69607058 | ID=Msa0784850-mRNA-1:exon:20949;Parent=Msa0784850-mRNA-1 |
| chr5_2 | exon | 69607340 | 69607409 | 69607340 | ID=Msa0784850-mRNA-1:exon:20950;Parent=Msa0784850-mRNA-1 |
| chr5_2 | exon | 69608173 | 69608209 | 69608173 | ID=Msa0784850-mRNA-1:exon:20951;Parent=Msa0784850-mRNA-1 |
| chr5_2 | exon | 69608359 | 69608833 | 69608359 | ID=Msa0784850-mRNA-1:exon:20952;Parent=Msa0784850-mRNA-1 |
| chr5_2 | five_prime_UTR | 69604039 | 69604441 | 69604039 | ID=Msa0784850-mRNA-1:five_prime_utr;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69604442 | 69604647 | 69604442 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69605984 | 69606380 | 69605984 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69607058 | 69607221 | 69607058 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69607340 | 69607409 | 69607340 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69608173 | 69608209 | 69608173 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | CDS | 69608359 | 69608519 | 69608359 | ID=Msa0784850-mRNA-1:cds;Parent=Msa0784850-mRNA-1 |
| chr5_2 | three_prime_UTR | 69608520 | 69608833 | 69608520 | ID=Msa0784850-mRNA-1:three_prime_utr;Parent=Msa0784850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
