Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271890 | XP_003593271.1 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.85e-107 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271890 | Q2HVA3 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 8.82e-108 | 316 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0271890 | 0.822391 | 2.428978e-53 | -8.615850e-47 |
| Msa0006040 | Msa0271890 | 0.800205 | 1.607692e-48 | -8.615850e-47 |
| Msa0006550 | Msa0271890 | 0.806609 | 7.569643e-50 | -8.615850e-47 |
| Msa0007440 | Msa0271890 | 0.807192 | 5.698690e-50 | -8.615850e-47 |
| Msa0008840 | Msa0271890 | 0.809694 | 1.666799e-50 | -8.615850e-47 |
| Msa0010490 | Msa0271890 | 0.822429 | 2.379693e-53 | -8.615850e-47 |
| Msa0010500 | Msa0271890 | 0.819930 | 8.966474e-53 | -8.615850e-47 |
| Msa0015090 | Msa0271890 | 0.804122 | 2.513945e-49 | -8.615850e-47 |
| Msa0020390 | Msa0271890 | 0.831761 | 1.389444e-55 | -8.615850e-47 |
| Msa0023000 | Msa0271890 | 0.838600 | 2.611146e-57 | -8.615850e-47 |
| Msa0029260 | Msa0271890 | 0.838136 | 3.440360e-57 | -8.615850e-47 |
| Msa0033110 | Msa0271890 | 0.814886 | 1.225827e-51 | -8.615850e-47 |
| Msa0033260 | Msa0271890 | 0.805754 | 1.145885e-49 | -8.615850e-47 |
| Msa0038870 | Msa0271890 | 0.811655 | 6.282042e-51 | -8.615850e-47 |
| Msa0051860 | Msa0271890 | 0.814286 | 1.664471e-51 | -8.615850e-47 |
| Msa0054750 | Msa0271890 | 0.819176 | 1.332519e-52 | -8.615850e-47 |
| Msa0071250 | Msa0271890 | 0.818264 | 2.146164e-52 | -8.615850e-47 |
| Msa0072170 | Msa0271890 | 0.806801 | 6.896726e-50 | -8.615850e-47 |
| Msa0084940 | Msa0271890 | 0.804564 | 2.032877e-49 | -8.615850e-47 |
| Msa0086420 | Msa0271890 | 0.826946 | 2.052425e-54 | -8.615850e-47 |
| Msa0090550 | Msa0271890 | 0.801220 | 9.978993e-49 | -8.615850e-47 |
| Msa0091410 | Msa0271890 | 0.809240 | 2.086420e-50 | -8.615850e-47 |
| Msa0091610 | Msa0271890 | 0.805435 | 1.336613e-49 | -8.615850e-47 |
| Msa0093010 | Msa0271890 | 0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0096980 | Msa0271890 | 0.840318 | 9.348402e-58 | -8.615850e-47 |
| Msa0100740 | Msa0271890 | 0.808183 | 3.509314e-50 | -8.615850e-47 |
| Msa0103790 | Msa0271890 | 0.817962 | 2.512013e-52 | -8.615850e-47 |
| Msa0115190 | Msa0271890 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
| Msa0115270 | Msa0271890 | 0.804371 | 2.230393e-49 | -8.615850e-47 |
| Msa0115370 | Msa0271890 | 0.806003 | 1.015606e-49 | -8.615850e-47 |
| Msa0115390 | Msa0271890 | 0.811239 | 7.733459e-51 | -8.615850e-47 |
| Msa0118540 | Msa0271890 | 0.861149 | 1.256889e-63 | -8.615850e-47 |
| Msa0118780 | Msa0271890 | 0.816968 | 4.206738e-52 | -8.615850e-47 |
| Msa0120540 | Msa0271890 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0121820 | Msa0271890 | 0.848013 | 8.034378e-60 | -8.615850e-47 |
| Msa0121870 | Msa0271890 | 0.820818 | 5.609226e-53 | -8.615850e-47 |
| Msa0126880 | Msa0271890 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0140110 | Msa0271890 | 0.829170 | 5.980114e-55 | -8.615850e-47 |
| Msa0145010 | Msa0271890 | 0.837192 | 6.008481e-57 | -8.615850e-47 |
| Msa0150260 | Msa0271890 | 0.801725 | 7.863124e-49 | -8.615850e-47 |
| Msa0159420 | Msa0271890 | 0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0162130 | Msa0271890 | 0.847413 | 1.175033e-59 | -8.615850e-47 |
| Msa0166750 | Msa0271890 | 0.807469 | 4.977827e-50 | -8.615850e-47 |
| Msa0169300 | Msa0271890 | 0.836434 | 9.377803e-57 | -8.615850e-47 |
| Msa0173070 | Msa0271890 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0183870 | Msa0271890 | 0.829669 | 4.524343e-55 | -8.615850e-47 |
| Msa0186310 | Msa0271890 | 0.801459 | 8.914316e-49 | -8.615850e-47 |
| Msa0189520 | Msa0271890 | 0.864570 | 1.105906e-64 | -8.615850e-47 |
| Msa0190120 | Msa0271890 | 0.964605 | 1.541713e-123 | -8.615850e-47 |
| Msa0190250 | Msa0271890 | 0.801288 | 9.664237e-49 | -8.615850e-47 |
| Msa0194480 | Msa0271890 | 0.824765 | 6.758278e-54 | -8.615850e-47 |
| Msa0197610 | Msa0271890 | 0.800600 | 1.335541e-48 | -8.615850e-47 |
| Msa0207040 | Msa0271890 | -0.800179 | 1.626869e-48 | -8.615850e-47 |
| Msa0207670 | Msa0271890 | 0.837813 | 4.164018e-57 | -8.615850e-47 |
| Msa0207700 | Msa0271890 | 0.808173 | 3.526701e-50 | -8.615850e-47 |
| Msa0209080 | Msa0271890 | 0.810012 | 1.424023e-50 | -8.615850e-47 |
| Msa0209350 | Msa0271890 | 0.817066 | 3.997531e-52 | -8.615850e-47 |
| Msa0209500 | Msa0271890 | 0.817376 | 3.404916e-52 | -8.615850e-47 |
| Msa0229360 | Msa0271890 | 0.805823 | 1.108125e-49 | -8.615850e-47 |
| Msa0231100 | Msa0271890 | 0.800377 | 1.482800e-48 | -8.615850e-47 |
| Msa0231790 | Msa0271890 | 0.801806 | 7.568748e-49 | -8.615850e-47 |
| Msa0232050 | Msa0271890 | 0.810075 | 1.380491e-50 | -8.615850e-47 |
| Msa0232550 | Msa0271890 | 0.802745 | 4.848785e-49 | -8.615850e-47 |
| Msa0236270 | Msa0271890 | 0.809838 | 1.552127e-50 | -8.615850e-47 |
| Msa0244980 | Msa0271890 | 0.827376 | 1.618644e-54 | -8.615850e-47 |
| Msa0249580 | Msa0271890 | 0.808347 | 3.237948e-50 | -8.615850e-47 |
| Msa0256330 | Msa0271890 | 0.837381 | 5.376318e-57 | -8.615850e-47 |
| Msa0257490 | Msa0271890 | 0.808589 | 2.875549e-50 | -8.615850e-47 |
| Msa0261550 | Msa0271890 | 0.844685 | 6.488564e-59 | -8.615850e-47 |
| Msa0265160 | Msa0271890 | 0.801547 | 8.551041e-49 | -8.615850e-47 |
| Msa0269470 | Msa0271890 | 0.815995 | 6.947713e-52 | -8.615850e-47 |
| Msa0271360 | Msa0271890 | 0.824875 | 6.369285e-54 | -8.615850e-47 |
| Msa0271890 | Msa0281530 | 0.801229 | 9.937627e-49 | -8.615850e-47 |
| Msa0271890 | Msa0283420 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0271890 | Msa0284820 | 0.822861 | 1.888388e-53 | -8.615850e-47 |
| Msa0271890 | Msa0295330 | 0.837208 | 5.953236e-57 | -8.615850e-47 |
| Msa0271890 | Msa0296790 | 0.810229 | 1.278896e-50 | -8.615850e-47 |
| Msa0271890 | Msa0296920 | 0.812859 | 3.430148e-51 | -8.615850e-47 |
| Msa0271890 | Msa0304590 | 0.815632 | 8.370013e-52 | -8.615850e-47 |
| Msa0271890 | Msa0304660 | 0.822131 | 2.791621e-53 | -8.615850e-47 |
| Msa0271890 | Msa0309880 | 0.806425 | 8.276699e-50 | -8.615850e-47 |
| Msa0271890 | Msa0310860 | 0.996992 | 3.118789e-235 | -8.615850e-47 |
| Msa0271890 | Msa0315850 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
| Msa0271890 | Msa0321690 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
| Msa0271890 | Msa0331700 | 0.817001 | 4.135282e-52 | -8.615850e-47 |
| Msa0271890 | Msa0335060 | 0.816928 | 4.294466e-52 | -8.615850e-47 |
| Msa0271890 | Msa0343850 | 0.833385 | 5.497408e-56 | -8.615850e-47 |
| Msa0271890 | Msa0345350 | 0.804948 | 1.690818e-49 | -8.615850e-47 |
| Msa0271890 | Msa0347680 | 0.801409 | 9.125946e-49 | -8.615850e-47 |
| Msa0271890 | Msa0358860 | 0.884636 | 1.618645e-71 | -8.615850e-47 |
| Msa0271890 | Msa0365700 | 0.813934 | 1.990450e-51 | -8.615850e-47 |
| Msa0271890 | Msa0365860 | 0.831772 | 1.380857e-55 | -8.615850e-47 |
| Msa0271890 | Msa0379260 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
| Msa0271890 | Msa0379410 | 0.805347 | 1.395122e-49 | -8.615850e-47 |
| Msa0271890 | Msa0380100 | 0.836053 | 1.172431e-56 | -8.615850e-47 |
| Msa0271890 | Msa0385500 | 0.807083 | 6.011403e-50 | -8.615850e-47 |
| Msa0271890 | Msa0386040 | 0.814600 | 1.418303e-51 | -8.615850e-47 |
| Msa0271890 | Msa0387910 | 0.803658 | 3.138036e-49 | -8.615850e-47 |
| Msa0271890 | Msa0394340 | 0.806501 | 7.978690e-50 | -8.615850e-47 |
| Msa0271890 | Msa0403770 | 0.825885 | 3.672195e-54 | -8.615850e-47 |
| Msa0271890 | Msa0408390 | 0.820312 | 7.330866e-53 | -8.615850e-47 |
| Msa0271890 | Msa0412840 | 0.812990 | 3.210780e-51 | -8.615850e-47 |
| Msa0271890 | Msa0414800 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0271890 | Msa0415430 | 0.826990 | 2.003215e-54 | -8.615850e-47 |
| Msa0271890 | Msa0419520 | 0.812948 | 3.278842e-51 | -8.615850e-47 |
| Msa0271890 | Msa0436190 | 0.816655 | 4.945588e-52 | -8.615850e-47 |
| Msa0271890 | Msa0442200 | 0.810348 | 1.205108e-50 | -8.615850e-47 |
| Msa0271890 | Msa0443430 | 0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0271890 | Msa0457510 | 0.832274 | 1.037752e-55 | -8.615850e-47 |
| Msa0271890 | Msa0458060 | 0.817949 | 2.528526e-52 | -8.615850e-47 |
| Msa0271890 | Msa0463340 | 0.810360 | 1.198104e-50 | -8.615850e-47 |
| Msa0271890 | Msa0467220 | 0.818924 | 1.520440e-52 | -8.615850e-47 |
| Msa0271890 | Msa0469620 | -0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0271890 | Msa0482940 | 0.815137 | 1.078480e-51 | -8.615850e-47 |
| Msa0271890 | Msa0484740 | 0.805831 | 1.104081e-49 | -8.615850e-47 |
| Msa0271890 | Msa0485850 | 0.821963 | 3.052641e-53 | -8.615850e-47 |
| Msa0271890 | Msa0489610 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0271890 | Msa0496450 | 0.828271 | 9.862427e-55 | -8.615850e-47 |
| Msa0271890 | Msa0506400 | 0.800469 | 1.420205e-48 | -8.615850e-47 |
| Msa0271890 | Msa0510840 | 0.814886 | 1.225827e-51 | -8.615850e-47 |
| Msa0271890 | Msa0520790 | 0.819545 | 1.097976e-52 | -8.615850e-47 |
| Msa0271890 | Msa0524600 | 0.845921 | 3.004227e-59 | -8.615850e-47 |
| Msa0271890 | Msa0534410 | 0.813610 | 2.346610e-51 | -8.615850e-47 |
| Msa0271890 | Msa0534900 | 0.859087 | 5.269884e-63 | -8.615850e-47 |
| Msa0271890 | Msa0542290 | 0.818674 | 1.732509e-52 | -8.615850e-47 |
| Msa0271890 | Msa0542560 | 0.828410 | 9.129391e-55 | -8.615850e-47 |
| Msa0271890 | Msa0544840 | 0.833820 | 4.282009e-56 | -8.615850e-47 |
| Msa0271890 | Msa0547160 | 0.826876 | 2.132178e-54 | -8.615850e-47 |
| Msa0271890 | Msa0549780 | 0.812431 | 4.253620e-51 | -8.615850e-47 |
| Msa0271890 | Msa0553220 | -0.806006 | 1.014368e-49 | -8.615850e-47 |
| Msa0271890 | Msa0557480 | 0.803678 | 3.109174e-49 | -8.615850e-47 |
| Msa0271890 | Msa0574060 | -0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0271890 | Msa0581110 | 0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa0271890 | Msa0581130 | 0.811429 | 7.033986e-51 | -8.615850e-47 |
| Msa0271890 | Msa0588240 | 0.805930 | 1.052539e-49 | -8.615850e-47 |
| Msa0271890 | Msa0588260 | 0.829898 | 3.978704e-55 | -8.615850e-47 |
| Msa0271890 | Msa0590650 | 0.821356 | 4.216604e-53 | -8.615850e-47 |
| Msa0271890 | Msa0591710 | 0.812666 | 3.780050e-51 | -8.615850e-47 |
| Msa0271890 | Msa0600080 | 0.817582 | 3.059968e-52 | -8.615850e-47 |
| Msa0271890 | Msa0600450 | 0.815122 | 1.086847e-51 | -8.615850e-47 |
| Msa0271890 | Msa0602370 | 0.833383 | 5.505163e-56 | -8.615850e-47 |
| Msa0271890 | Msa0603570 | 0.824832 | 6.517719e-54 | -8.615850e-47 |
| Msa0271890 | Msa0604290 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0271890 | Msa0607510 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0271890 | Msa0609220 | 0.840069 | 1.085493e-57 | -8.615850e-47 |
| Msa0271890 | Msa0612720 | 0.805968 | 1.033100e-49 | -8.615850e-47 |
| Msa0271890 | Msa0614990 | 0.806811 | 6.860428e-50 | -8.615850e-47 |
| Msa0271890 | Msa0615680 | 0.807580 | 4.715359e-50 | -8.615850e-47 |
| Msa0271890 | Msa0618930 | 0.800042 | 1.735073e-48 | -8.615850e-47 |
| Msa0271890 | Msa0626940 | 0.817749 | 2.805962e-52 | -8.615850e-47 |
| Msa0271890 | Msa0631350 | 0.858579 | 7.476868e-63 | -8.615850e-47 |
| Msa0271890 | Msa0635380 | 0.802971 | 4.355800e-49 | -8.615850e-47 |
| Msa0271890 | Msa0640940 | 0.807672 | 4.508123e-50 | -8.615850e-47 |
| Msa0271890 | Msa0642970 | 0.815580 | 8.594615e-52 | -8.615850e-47 |
| Msa0271890 | Msa0643320 | 0.830065 | 3.621611e-55 | -8.615850e-47 |
| Msa0271890 | Msa0651930 | 0.800263 | 1.564640e-48 | -8.615850e-47 |
| Msa0271890 | Msa0661710 | 0.813809 | 2.120460e-51 | -8.615850e-47 |
| Msa0271890 | Msa0662630 | 0.823898 | 1.080772e-53 | -8.615850e-47 |
| Msa0271890 | Msa0665080 | 0.807340 | 5.303352e-50 | -8.615850e-47 |
| Msa0271890 | Msa0669720 | 0.843335 | 1.492413e-58 | -8.615850e-47 |
| Msa0271890 | Msa0669760 | 0.821970 | 3.041312e-53 | -8.615850e-47 |
| Msa0271890 | Msa0679360 | 0.816631 | 5.007040e-52 | -8.615850e-47 |
| Msa0271890 | Msa0682680 | 0.850811 | 1.333756e-60 | -8.615850e-47 |
| Msa0271890 | Msa0683140 | 0.831364 | 1.740980e-55 | -8.615850e-47 |
| Msa0271890 | Msa0683600 | 0.837724 | 4.390102e-57 | -8.615850e-47 |
| Msa0271890 | Msa0693060 | 0.809964 | 1.458217e-50 | -8.615850e-47 |
| Msa0271890 | Msa0698540 | 0.812128 | 4.954169e-51 | -8.615850e-47 |
| Msa0271890 | Msa0705820 | 0.814684 | 1.359454e-51 | -8.615850e-47 |
| Msa0271890 | Msa0705990 | 0.807112 | 5.926343e-50 | -8.615850e-47 |
| Msa0271890 | Msa0706960 | 0.809212 | 2.115149e-50 | -8.615850e-47 |
| Msa0271890 | Msa0709160 | 0.803690 | 3.091242e-49 | -8.615850e-47 |
| Msa0271890 | Msa0713340 | 0.803316 | 3.695143e-49 | -8.615850e-47 |
| Msa0271890 | Msa0748170 | 0.845596 | 3.680006e-59 | -8.615850e-47 |
| Msa0271890 | Msa0751010 | 0.813433 | 2.566234e-51 | -8.615850e-47 |
| Msa0271890 | Msa0754930 | 0.807387 | 5.182431e-50 | -8.615850e-47 |
| Msa0271890 | Msa0756550 | 0.802898 | 4.509593e-49 | -8.615850e-47 |
| Msa0271890 | Msa0760350 | 0.800967 | 1.124307e-48 | -8.615850e-47 |
| Msa0271890 | Msa0765180 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa0271890 | Msa0769980 | 0.805976 | 1.028976e-49 | -8.615850e-47 |
| Msa0271890 | Msa0784860 | 0.804731 | 1.876308e-49 | -8.615850e-47 |
| Msa0271890 | Msa0788540 | 0.808458 | 3.066054e-50 | -8.615850e-47 |
| Msa0271890 | Msa0793380 | 0.834514 | 2.868255e-56 | -8.615850e-47 |
| Msa0271890 | Msa0794050 | 0.825713 | 4.035276e-54 | -8.615850e-47 |
| Msa0271890 | Msa0798440 | 0.805959 | 1.037406e-49 | -8.615850e-47 |
| Msa0271890 | Msa0799340 | 0.816376 | 5.710423e-52 | -8.615850e-47 |
| Msa0271890 | Msa0800370 | 0.838876 | 2.215551e-57 | -8.615850e-47 |
| Msa0271890 | Msa0801110 | 0.800752 | 1.243881e-48 | -8.615850e-47 |
| Msa0271890 | Msa0801730 | 0.814688 | 1.356519e-51 | -8.615850e-47 |
| Msa0271890 | Msa0833190 | -0.808568 | 2.905981e-50 | -8.615850e-47 |
| Msa0271890 | Msa0834330 | 0.818965 | 1.488184e-52 | -8.615850e-47 |
| Msa0271890 | Msa0837420 | -0.804814 | 1.802786e-49 | -8.615850e-47 |
| Msa0271890 | Msa0846230 | 0.800104 | 1.685370e-48 | -8.615850e-47 |
| Msa0271890 | Msa0849030 | 0.814846 | 1.251177e-51 | -8.615850e-47 |
| Msa0271890 | Msa0860900 | -0.806296 | 8.814801e-50 | -8.615850e-47 |
| Msa0271890 | Msa0861470 | 0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0271890 | Msa0861570 | 0.812822 | 3.493916e-51 | -8.615850e-47 |
| Msa0271890 | Msa0867520 | -0.809726 | 1.640718e-50 | -8.615850e-47 |
| Msa0271890 | Msa0879860 | 0.849048 | 4.152327e-60 | -8.615850e-47 |
| Msa0271890 | Msa0887250 | 0.826488 | 2.639849e-54 | -8.615850e-47 |
| Msa0271890 | Msa0899240 | -0.805804 | 1.118299e-49 | -8.615850e-47 |
| Msa0271890 | Msa0923780 | 0.812078 | 5.079542e-51 | -8.615850e-47 |
| Msa0271890 | Msa0928010 | 0.807083 | 6.009886e-50 | -8.615850e-47 |
| Msa0271890 | Msa0932570 | 0.811898 | 5.561615e-51 | -8.615850e-47 |
| Msa0271890 | Msa0933380 | 0.842361 | 2.710328e-58 | -8.615850e-47 |
| Msa0271890 | Msa0943270 | 0.810518 | 1.107467e-50 | -8.615850e-47 |
| Msa0271890 | Msa0944200 | 0.826572 | 2.521064e-54 | -8.615850e-47 |
| Msa0271890 | Msa0944610 | 0.828212 | 1.018966e-54 | -8.615850e-47 |
| Msa0271890 | Msa0947800 | 0.833315 | 5.724313e-56 | -8.615850e-47 |
| Msa0271890 | Msa0963090 | -0.811478 | 6.861606e-51 | -8.615850e-47 |
| Msa0271890 | Msa0970530 | 0.816278 | 6.005187e-52 | -8.615850e-47 |
| Msa0271890 | Msa0970600 | 0.823059 | 1.698257e-53 | -8.615850e-47 |
| Msa0271890 | Msa0971160 | 0.827283 | 1.704069e-54 | -8.615850e-47 |
| Msa0271890 | Msa0974810 | 0.811692 | 6.165663e-51 | -8.615850e-47 |
| Msa0271890 | Msa0974950 | 0.840647 | 7.665271e-58 | -8.615850e-47 |
| Msa0271890 | Msa0993240 | 0.820431 | 6.884371e-53 | -8.615850e-47 |
| Msa0271890 | Msa0994370 | 0.834567 | 2.780935e-56 | -8.615850e-47 |
| Msa0271890 | Msa0999050 | -0.818307 | 2.099194e-52 | -8.615850e-47 |
| Msa0271890 | Msa1002600 | -0.812838 | 3.465187e-51 | -8.615850e-47 |
| Msa0271890 | Msa1023180 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa0271890 | Msa1029050 | 0.811920 | 5.498742e-51 | -8.615850e-47 |
| Msa0271890 | Msa1029080 | -0.818548 | 1.851231e-52 | -8.615850e-47 |
| Msa0271890 | Msa1043050 | 0.805711 | 1.169860e-49 | -8.615850e-47 |
| Msa0271890 | Msa1054150 | -0.815343 | 9.703159e-52 | -8.615850e-47 |
| Msa0271890 | Msa1063510 | 0.809555 | 1.786239e-50 | -8.615850e-47 |
| Msa0271890 | Msa1071320 | 0.817846 | 2.668040e-52 | -8.615850e-47 |
| Msa0271890 | Msa1081790 | -0.821347 | 4.236944e-53 | -8.615850e-47 |
| Msa0271890 | Msa1081930 | 0.803406 | 3.539062e-49 | -8.615850e-47 |
| Msa0271890 | Msa1088290 | 0.821710 | 3.493536e-53 | -8.615850e-47 |
| Msa0271890 | Msa1091100 | 0.806367 | 8.513014e-50 | -8.615850e-47 |
| Msa0271890 | Msa1094430 | 0.833999 | 3.862201e-56 | -8.615850e-47 |
| Msa0271890 | Msa1107160 | 0.821687 | 3.536660e-53 | -8.615850e-47 |
| Msa0271890 | Msa1120810 | 0.800389 | 1.474940e-48 | -8.615850e-47 |
| Msa0271890 | Msa1125790 | -0.818303 | 2.102925e-52 | -8.615850e-47 |
| Msa0271890 | Msa1126830 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
| Msa0271890 | Msa1128990 | 0.803286 | 3.747564e-49 | -8.615850e-47 |
| Msa0271890 | Msa1133230 | 0.829410 | 5.227851e-55 | -8.615850e-47 |
| Msa0271890 | Msa1133250 | 0.829577 | 4.763422e-55 | -8.615850e-47 |
| Msa0271890 | Msa1134090 | 0.808425 | 3.116510e-50 | -8.615850e-47 |
| Msa0271890 | Msa1140150 | 0.818088 | 2.351939e-52 | -8.615850e-47 |
| Msa0271890 | Msa1140230 | 0.802870 | 4.569451e-49 | -8.615850e-47 |
| Msa0271890 | Msa1150710 | 0.813898 | 2.027695e-51 | -8.615850e-47 |
| Msa0271890 | Msa1156170 | -0.811502 | 6.779956e-51 | -8.615850e-47 |
| Msa0271890 | Msa1158640 | -0.817258 | 3.620344e-52 | -8.615850e-47 |
| Msa0271890 | Msa1165780 | 0.830672 | 2.573479e-55 | -8.615850e-47 |
| Msa0271890 | Msa1165960 | 0.813038 | 3.132469e-51 | -8.615850e-47 |
| Msa0271890 | Msa1166090 | -0.830907 | 2.254777e-55 | -8.615850e-47 |
| Msa0271890 | Msa1200320 | 0.865845 | 4.393338e-65 | -8.615850e-47 |
| Msa0271890 | Msa1205590 | 0.806949 | 6.415396e-50 | -8.615850e-47 |
| Msa0271890 | Msa1208380 | 0.830735 | 2.483674e-55 | -8.615850e-47 |
| Msa0271890 | Msa1217650 | -0.805836 | 1.101393e-49 | -8.615850e-47 |
| Msa0271890 | Msa1233850 | 0.813277 | 2.777199e-51 | -8.615850e-47 |
| Msa0271890 | Msa1242920 | -0.815205 | 1.041611e-51 | -8.615850e-47 |
| Msa0271890 | Msa1253800 | 0.814529 | 1.471148e-51 | -8.615850e-47 |
| Msa0271890 | Msa1254730 | 0.816749 | 4.709580e-52 | -8.615850e-47 |
| Msa0271890 | Msa1260130 | 0.815264 | 1.010536e-51 | -8.615850e-47 |
| Msa0271890 | Msa1261680 | -0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0271890 | Msa1267260 | 0.805120 | 1.555807e-49 | -8.615850e-47 |
| Msa0271890 | Msa1270660 | 0.805180 | 1.511754e-49 | -8.615850e-47 |
| Msa0271890 | Msa1295330 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
| Msa0271890 | Msa1296830 | 0.848938 | 4.453825e-60 | -8.615850e-47 |
| Msa0271890 | Msa1303580 | 0.823224 | 1.554189e-53 | -8.615850e-47 |
| Msa0271890 | Msa1336560 | 0.838895 | 2.190754e-57 | -8.615850e-47 |
| Msa0271890 | Msa1337170 | 0.821870 | 3.208212e-53 | -8.615850e-47 |
| Msa0271890 | Msa1343290 | 0.801362 | 9.331543e-49 | -8.615850e-47 |
| Msa0271890 | Msa1344660 | 0.807080 | 6.018788e-50 | -8.615850e-47 |
| Msa0271890 | Msa1345220 | 0.804622 | 1.977487e-49 | -8.615850e-47 |
| Msa0271890 | Msa1348850 | 0.804607 | 1.991872e-49 | -8.615850e-47 |
| Msa0271890 | Msa1351540 | 0.827848 | 1.247375e-54 | -8.615850e-47 |
| Msa0271890 | Msa1357890 | 0.801706 | 7.934228e-49 | -8.615850e-47 |
| Msa0271890 | Msa1359270 | 0.801035 | 1.088673e-48 | -8.615850e-47 |
| Msa0271890 | Msa1359630 | 0.817379 | 3.400473e-52 | -8.615850e-47 |
| Msa0271890 | Msa1360140 | 0.810178 | 1.311559e-50 | -8.615850e-47 |
| Msa0271890 | Msa1362420 | 0.806002 | 1.016226e-49 | -8.615850e-47 |
| Msa0271890 | Msa1365800 | 0.803072 | 4.149808e-49 | -8.615850e-47 |
| Msa0271890 | Msa1366650 | 0.804768 | 1.843645e-49 | -8.615850e-47 |
| Msa0271890 | Msa1368530 | 0.814183 | 1.753813e-51 | -8.615850e-47 |
| Msa0271890 | Msa1370340 | 0.812214 | 4.745571e-51 | -8.615850e-47 |
| Msa0271890 | Msa1370590 | 0.817331 | 3.485881e-52 | -8.615850e-47 |
| Msa0271890 | Msa1371090 | 0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa0271890 | Msa1381650 | 0.818818 | 1.606967e-52 | -8.615850e-47 |
| Msa0271890 | Msa1384100 | 0.815342 | 9.709418e-52 | -8.615850e-47 |
| Msa0271890 | Msa1396400 | -0.827167 | 1.816509e-54 | -8.615850e-47 |
| Msa0271890 | Msa1403340 | 0.816463 | 5.458853e-52 | -8.615850e-47 |
| Msa0271890 | Msa1407970 | 0.813360 | 2.662863e-51 | -8.615850e-47 |
| Msa0271890 | Msa1417570 | 0.800632 | 1.315941e-48 | -8.615850e-47 |
| Msa0271890 | Msa1419000 | 0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa0271890 | Msa1420990 | 0.819002 | 1.459544e-52 | -8.615850e-47 |
| Msa0271890 | Msa1422810 | 0.838174 | 3.363816e-57 | -8.615850e-47 |
| Msa0271890 | Msa1428880 | 0.812058 | 5.131019e-51 | -8.615850e-47 |
| Msa0271890 | Msa1431560 | -0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa0271890 | Msa1436520 | 0.843330 | 1.497495e-58 | -8.615850e-47 |
| Msa0271890 | Msa1438840 | 0.827862 | 1.237158e-54 | -8.615850e-47 |
| Msa0271890 | Msa1444120 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
| Msa0271890 | Msa1454450 | 0.817343 | 3.464211e-52 | -8.615850e-47 |
| Msa0271890 | Msa1454680 | 0.818561 | 1.837888e-52 | -8.615850e-47 |
| Msa0271890 | Msa1458810 | 0.814569 | 1.441246e-51 | -8.615850e-47 |
| Msa0271890 | Msa1459960 | 0.805007 | 1.642897e-49 | -8.615850e-47 |
| Msa0271890 | Msa1460320 | -0.824687 | 7.050840e-54 | -8.615850e-47 |
| Msa0271890 | Msa1462720 | 0.804733 | 1.874906e-49 | -8.615850e-47 |
| Msa0271890 | Msa1465960 | 0.831706 | 1.433739e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271890 | MtrunA17_Chr2g0279631 | 89.944 | 179 | 11 | 1 | 1 | 172 | 1 | 179 | 1.70e-111 | 316 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0271890 | AT4G33625.1 | 67.598 | 179 | 56 | 1 | 4 | 180 | 5 | 183 | 6.90e-88 | 256 |
| Msa0271890 | AT4G33625.2 | 66.854 | 178 | 57 | 1 | 4 | 179 | 5 | 182 | 2.05e-85 | 250 |
| Msa0271890 | AT4G33625.3 | 67.586 | 145 | 45 | 1 | 4 | 146 | 5 | 149 | 4.27e-68 | 206 |
Find 66 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATATCTAAAGGCGATAT+TGG | 0.249737 | 2_3:-3388119 | Msa0271890:three_prime_UTR |
| CATACGAAATGACTGGTAAA+TGG | 0.263245 | 2_3:+3388083 | None:intergenic |
| GTAACCAACACTAACATAAA+AGG | 0.301548 | 2_3:+3388190 | None:intergenic |
| AAATATCTAAAGGCGATATT+GGG | 0.318111 | 2_3:-3388118 | Msa0271890:three_prime_UTR |
| CTCTAGTGATCTCTTGCTTC+TGG | 0.322823 | 2_3:+3388926 | None:intergenic |
| GTAAAAGAAGGCCTTTGTTT+TGG | 0.339976 | 2_3:+3388012 | None:intergenic |
| CTCTTGTGAACAAAATTAGA+AGG | 0.372460 | 2_3:-3387858 | Msa0271890:three_prime_UTR |
| TTCTCGAGTATTGGGCAGGC+AGG | 0.377149 | 2_3:-3390229 | Msa0271890:CDS |
| AGAGCTTTCCCTGGCTATAG+TGG | 0.408839 | 2_3:-3389597 | Msa0271890:CDS |
| TAGAGAATGAACAAACGATA+TGG | 0.408890 | 2_3:+3388168 | None:intergenic |
| TGGCGTAGTTTACGTTATCT+TGG | 0.420109 | 2_3:-3389517 | Msa0271890:intron |
| ATACGAAATGACTGGTAAAT+GGG | 0.430779 | 2_3:+3388084 | None:intergenic |
| ACTCGACTCGTAGGTAGAAC+TGG | 0.465302 | 2_3:+3390646 | None:intergenic |
| TTCTCTTCATCTTCCTCTCT+AGG | 0.465361 | 2_3:+3390679 | None:intergenic |
| TGCTATTTGCTTCTTTCTTG+TGG | 0.467457 | 2_3:-3389537 | Msa0271890:CDS |
| CTAACATAAAAGGCATTCAT+AGG | 0.469430 | 2_3:+3388200 | None:intergenic |
| GCAACTGCTTGTGACAGAAT+AGG | 0.469735 | 2_3:-3388300 | Msa0271890:exon |
| GCTGAAATTGTCTAATTACT+TGG | 0.480632 | 2_3:-3388256 | Msa0271890:three_prime_UTR |
| TTTCGCTCCCCACTATAGCC+AGG | 0.487874 | 2_3:+3389588 | None:intergenic |
| AACAGCAGAGAGAACGTTAA+CGG | 0.491540 | 2_3:+3390543 | None:intergenic |
| TTTCTTAGTTAGGGAGGAGG+AGG | 0.502472 | 2_3:+3390814 | None:intergenic |
| TGGTTCTCGTTGAGACTGAA+TGG | 0.505524 | 2_3:-3390353 | Msa0271890:CDS |
| CTCGAGTATTGGGCAGGCAG+GGG | 0.509030 | 2_3:-3390227 | Msa0271890:CDS |
| ATCTTTCTTAGTTAGGGAGG+AGG | 0.514598 | 2_3:+3390811 | None:intergenic |
| TCTCGAGTATTGGGCAGGCA+GGG | 0.517138 | 2_3:-3390228 | Msa0271890:CDS |
| TATTCTGTGTAAATATCTAA+AGG | 0.522284 | 2_3:-3388128 | Msa0271890:three_prime_UTR |
| TTGTTCACAAGAGAGGTATG+AGG | 0.531108 | 2_3:+3387868 | None:intergenic |
| CTGTTGAAGTTGATCGAGGA+TGG | 0.532789 | 2_3:-3387913 | Msa0271890:three_prime_UTR |
| ATAAAAGGCATTCATAGGCC+AGG | 0.534215 | 2_3:+3388205 | None:intergenic |
| GTTGAAGTTGATCGAGGATG+GGG | 0.534278 | 2_3:-3387911 | Msa0271890:three_prime_UTR |
| GAGCTTTCCCTGGCTATAGT+GGG | 0.535147 | 2_3:-3389596 | Msa0271890:CDS |
| ACACATCACCTCAAGATCCT+TGG | 0.539361 | 2_3:+3388894 | None:intergenic |
| TGAAACATCTACAAACTATG+AGG | 0.542229 | 2_3:+3390602 | None:intergenic |
| CAGGTTCTCGAGTATTGGGC+AGG | 0.543908 | 2_3:-3390233 | Msa0271890:CDS |
| TGTTGAAGTTGATCGAGGAT+GGG | 0.548109 | 2_3:-3387912 | Msa0271890:three_prime_UTR |
| ATTGTCTAATTACTTGGTGA+AGG | 0.551948 | 2_3:-3388250 | Msa0271890:three_prime_UTR |
| TTGAAGGGAGTCCTTTGCGT+TGG | 0.558019 | 2_3:-3388967 | Msa0271890:intron |
| TCTATCTTTCTTAGTTAGGG+AGG | 0.559313 | 2_3:+3390808 | None:intergenic |
| CACTAGAGAGCAAGCAACCA+AGG | 0.560997 | 2_3:-3388911 | Msa0271890:CDS |
| CTTCGTTCAACTCGACTCGT+AGG | 0.565568 | 2_3:+3390637 | None:intergenic |
| ACTATAGCCAGGGAAAGCTC+TGG | 0.578804 | 2_3:+3389599 | None:intergenic |
| TTCGCTCCCCACTATAGCCA+GGG | 0.578838 | 2_3:+3389589 | None:intergenic |
| GTGATGACCAGAGCTTTCCC+TGG | 0.579648 | 2_3:-3389606 | Msa0271890:CDS |
| ACAAGAGAGGTATGAGGACG+AGG | 0.583020 | 2_3:+3387874 | None:intergenic |
| CATCTACAAACTATGAGGAA+AGG | 0.595696 | 2_3:+3390607 | None:intergenic |
| AAGGCTGAAGAGACGACTAA+AGG | 0.596101 | 2_3:-3388231 | Msa0271890:three_prime_UTR |
| GCAAGCAACCAAGGATCTTG+AGG | 0.600033 | 2_3:-3388902 | Msa0271890:intron |
| TTGTAGAGGCTCAAAACAGT+GGG | 0.610510 | 2_3:+3388057 | None:intergenic |
| GCAGAGAATAGCAGCTAAAG+CGG | 0.612889 | 2_3:+3390570 | None:intergenic |
| AGGTTATTGACTTATTGTAG+AGG | 0.614079 | 2_3:+3388043 | None:intergenic |
| TGGGAGGCATACGAAATGAC+TGG | 0.615864 | 2_3:+3388076 | None:intergenic |
| AGCTTTCCCTGGCTATAGTG+GGG | 0.618131 | 2_3:-3389595 | Msa0271890:CDS |
| AATATCTAAAGGCGATATTG+GGG | 0.619302 | 2_3:-3388117 | Msa0271890:three_prime_UTR |
| AGAGACGACTAAAGGAAACC+TGG | 0.622315 | 2_3:-3388223 | Msa0271890:three_prime_UTR |
| TTCTTAGTTAGGGAGGAGGA+GGG | 0.626053 | 2_3:+3390815 | None:intergenic |
| CCTCTCCACACCCAAAACAA+AGG | 0.631992 | 2_3:-3388023 | Msa0271890:three_prime_UTR |
| AGAGAGGAAGATGAAGAGAA+CGG | 0.638221 | 2_3:-3390676 | Msa0271890:CDS |
| AGACGTGAAGATGCCTAGAG+AGG | 0.640729 | 2_3:-3390692 | Msa0271890:exon |
| ATTGTAGAGGCTCAAAACAG+TGG | 0.644746 | 2_3:+3388056 | None:intergenic |
| TACGAAATGACTGGTAAATG+GGG | 0.646417 | 2_3:+3388085 | None:intergenic |
| TAGAGGCTCAAAACAGTGGG+AGG | 0.648160 | 2_3:+3388060 | None:intergenic |
| CTTCAACAGTTCAACGACGT+GGG | 0.652621 | 2_3:+3387927 | None:intergenic |
| ACGAAATGACTGGTAAATGG+GGG | 0.678205 | 2_3:+3388086 | None:intergenic |
| ACTTCAACAGTTCAACGACG+TGG | 0.681043 | 2_3:+3387926 | None:intergenic |
| TGAACTGTTGAAGTTGATCG+AGG | 0.699251 | 2_3:-3387917 | Msa0271890:three_prime_UTR |
| GAGGAAGATGAAGAGAACGG+TGG | 0.701747 | 2_3:-3390673 | Msa0271890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACTTTAGAAATTAAAT+TGG | - | chr2_3:3388709-3388728 | Msa0271890:intron | 10.0% |
| !!! | AAATCTAAAACAAAAAACAA+TGG | + | chr2_3:3388245-3388264 | None:intergenic | 15.0% |
| !!! | TTCATAATCATGTTTTTTAA+TGG | - | chr2_3:3388520-3388539 | Msa0271890:intron | 15.0% |
| !! | CTAACTTTAATATGATATAA+AGG | + | chr2_3:3388572-3388591 | None:intergenic | 15.0% |
| !! | TAGGAGATTAAATTAAATTA+AGG | - | chr2_3:3388745-3388764 | Msa0271890:intron | 15.0% |
| !! | AGGAGATTAAATTAAATTAA+GGG | - | chr2_3:3388746-3388765 | Msa0271890:intron | 15.0% |
| !! | CTATCATATAGTATTATTTA+AGG | + | chr2_3:3388866-3388885 | None:intergenic | 15.0% |
| !!! | TATTGATTTTTCACATTATT+GGG | - | chr2_3:3389351-3389370 | Msa0271890:intron | 15.0% |
| !! | ATTATTAGTTAAAGAAATGA+AGG | - | chr2_3:3390035-3390054 | Msa0271890:intron | 15.0% |
| !!! | ATTTTTTATGATGTAAAAGA+AGG | + | chr2_3:3390666-3390685 | None:intergenic | 15.0% |
| !!! | TTTTCTATCTTTCTTAGTTA+GGG | + | chr2_3:3387861-3387880 | None:intergenic | 20.0% |
| !!! | ATTTTCTATCTTTCTTAGTT+AGG | + | chr2_3:3387862-3387881 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTAGATTTTCGA+TGG | - | chr2_3:3388249-3388268 | Msa0271890:three_prime_UTR | 20.0% |
| !!! | ATTAATTTTCTTGCATTTTC+AGG | - | chr2_3:3388411-3388430 | Msa0271890:intron | 20.0% |
| !!! | TTTCTAGTATTATCAAACAA+GGG | + | chr2_3:3389240-3389259 | None:intergenic | 20.0% |
| !!! | TCATATTTTGACTAACATTT+TGG | + | chr2_3:3389263-3389282 | None:intergenic | 20.0% |
| !!! | ATACAAACATCAAATTGTTT+TGG | + | chr2_3:3389300-3389319 | None:intergenic | 20.0% |
| !!! | CTATTGATTTTTCACATTAT+TGG | - | chr2_3:3389350-3389369 | Msa0271890:intron | 20.0% |
| !!! | ATTTCTAAAGTATTAAACTC+AGG | + | chr2_3:3389390-3389409 | None:intergenic | 20.0% |
| !!! | AAATGGTTTCATTTAAGTTT+GGG | + | chr2_3:3389413-3389432 | None:intergenic | 20.0% |
| !!! | ATTCTTTAGAACATAAATTG+AGG | + | chr2_3:3389621-3389640 | None:intergenic | 20.0% |
| !! | CAACAAATTAACTAAATTTG+CGG | + | chr2_3:3389894-3389913 | None:intergenic | 20.0% |
| !! | CAACAAATTAATATCAGTAA+CGG | + | chr2_3:3389925-3389944 | None:intergenic | 20.0% |
| !! | GAAATTGCAACAATAAAATT+TGG | + | chr2_3:3389990-3390009 | None:intergenic | 20.0% |
| !! | TATTCTGTGTAAATATCTAA+AGG | - | chr2_3:3390535-3390554 | Msa0271890:CDS | 20.0% |
| !!! | TACAGTATTTGTGTTTTTGA+AGG | + | chr2_3:3388150-3388169 | None:intergenic | 25.0% |
| ! | CAATTTATTCCTTCATTCAT+CGG | - | chr2_3:3388204-3388223 | Msa0271890:three_prime_UTR | 25.0% |
| !!! | CTTCATAATTAAGTTTTGTC+AGG | - | chr2_3:3388335-3388354 | Msa0271890:intron | 25.0% |
| ! | TTTCCTTCATTTCATTTCTT+AGG | - | chr2_3:3388366-3388385 | Msa0271890:intron | 25.0% |
| ! | TTGTTACATGTAATTGTGTT+TGG | - | chr2_3:3388495-3388514 | Msa0271890:intron | 25.0% |
| !!! | GAGTTTTTGTTTTGTTTTGA+GGG | + | chr2_3:3388620-3388639 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTGTTTTGTTTTG+AGG | + | chr2_3:3388621-3388640 | None:intergenic | 25.0% |
| ! | AATTGGAGATTATGATACTT+AGG | - | chr2_3:3388726-3388745 | Msa0271890:intron | 25.0% |
| !!! | AGACTATAGTTTGCTTTATT+TGG | + | chr2_3:3389180-3389199 | None:intergenic | 25.0% |
| !! | TATTATCAAACAAGGGTTTT+GGG | + | chr2_3:3389233-3389252 | None:intergenic | 25.0% |
| !!! | GTTTCTAGTATTATCAAACA+AGG | + | chr2_3:3389241-3389260 | None:intergenic | 25.0% |
| !! | GAAATGGTTTCATTTAAGTT+TGG | + | chr2_3:3389414-3389433 | None:intergenic | 25.0% |
| !! | TGAAATTTTCAAAGCGAATA+TGG | + | chr2_3:3389463-3389482 | None:intergenic | 25.0% |
| !! | TTGTTTGTATTGTCATTTGA+AGG | - | chr2_3:3389680-3389699 | Msa0271890:intron | 25.0% |
| !! | TGTTTGTATTGTCATTTGAA+GGG | - | chr2_3:3389681-3389700 | Msa0271890:intron | 25.0% |
| ! | ATATAATCAGATCATGTAGT+TGG | + | chr2_3:3389951-3389970 | None:intergenic | 25.0% |
| ! | TGCAATTTCAAATCAAATGT+TGG | - | chr2_3:3390001-3390020 | Msa0271890:intron | 25.0% |
| ! | ACAGATAGCAATAATCATAT+GGG | + | chr2_3:3390082-3390101 | None:intergenic | 25.0% |
| ! | TACAGATAGCAATAATCATA+TGG | + | chr2_3:3390083-3390102 | None:intergenic | 25.0% |
| ! | TAGAATAAACTTTGACACTT+AGG | + | chr2_3:3390232-3390251 | None:intergenic | 25.0% |
| ! | ACTTCTTTAGCAAAAGTTTA+TGG | + | chr2_3:3390288-3390307 | None:intergenic | 25.0% |
| ! | TAAATATCTAAAGGCGATAT+TGG | - | chr2_3:3390544-3390563 | Msa0271890:CDS | 25.0% |
| ! | AAATATCTAAAGGCGATATT+GGG | - | chr2_3:3390545-3390564 | Msa0271890:CDS | 25.0% |
| TGAAACATCTACAAACTATG+AGG | + | chr2_3:3388064-3388083 | None:intergenic | 30.0% | |
| AATTGCGAAAAGAAGAAAGA+AGG | + | chr2_3:3388189-3388208 | None:intergenic | 30.0% | |
| GATCCTAAGAAATGAAATGA+AGG | + | chr2_3:3388372-3388391 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTGTTTTGAGGGA+AGG | + | chr2_3:3388616-3388635 | None:intergenic | 30.0% |
| !! | AGTTTTTCAACTCGAAACTT+AGG | - | chr2_3:3388793-3388812 | Msa0271890:intron | 30.0% |
| !!! | GTTTTGTTTCTTACTGAGTT+TGG | - | chr2_3:3389013-3389032 | Msa0271890:intron | 30.0% |
| !!! | TTGGTTTTTTTTTTGCAGTG+CGG | - | chr2_3:3389032-3389051 | Msa0271890:intron | 30.0% |
| ! | GTATTATCAAACAAGGGTTT+TGG | + | chr2_3:3389234-3389253 | None:intergenic | 30.0% |
| ! | AGCTCTTATTTGATATACCT+TGG | - | chr2_3:3389525-3389544 | Msa0271890:CDS | 30.0% |
| ! | GCTCTTATTTGATATACCTT+GGG | - | chr2_3:3389526-3389545 | Msa0271890:CDS | 30.0% |
| AGAACATAAATTGAGGAGTA+AGG | + | chr2_3:3389614-3389633 | None:intergenic | 30.0% | |
| ! | TTAGTGCAATGTTTTGTCAT+TGG | + | chr2_3:3389871-3389890 | None:intergenic | 30.0% |
| ! | AATTTGGAGCAAGGAAATAT+GGG | + | chr2_3:3389974-3389993 | None:intergenic | 30.0% |
| ! | AAATTTGGAGCAAGGAAATA+TGG | + | chr2_3:3389975-3389994 | None:intergenic | 30.0% |
| ! | CAACAATAAAATTTGGAGCA+AGG | + | chr2_3:3389983-3390002 | None:intergenic | 30.0% |
| TAGTTAAAGAAATGAAGGCT+AGG | - | chr2_3:3390040-3390059 | Msa0271890:intron | 30.0% | |
| AGCAATAATCATATGGGTAT+GGG | + | chr2_3:3390076-3390095 | None:intergenic | 30.0% | |
| TAGCAATAATCATATGGGTA+TGG | + | chr2_3:3390077-3390096 | None:intergenic | 30.0% | |
| ! | TTTGAAACAATGTGTGAACA+TGG | - | chr2_3:3390103-3390122 | Msa0271890:intron | 30.0% |
| AAAGTGTACAAACTCTAAAC+AGG | + | chr2_3:3390165-3390184 | None:intergenic | 30.0% | |
| GCTGAAATTGTCTAATTACT+TGG | - | chr2_3:3390407-3390426 | Msa0271890:intron | 30.0% | |
| ! | ATTGTCTAATTACTTGGTGA+AGG | - | chr2_3:3390413-3390432 | Msa0271890:intron | 30.0% |
| !! | CTAACATAAAAGGCATTCAT+AGG | + | chr2_3:3390466-3390485 | None:intergenic | 30.0% |
| ! | AATGCCTTTTATGTTAGTGT+TGG | - | chr2_3:3390469-3390488 | Msa0271890:intron | 30.0% |
| GTAACCAACACTAACATAAA+AGG | + | chr2_3:3390476-3390495 | None:intergenic | 30.0% | |
| TAGAGAATGAACAAACGATA+TGG | + | chr2_3:3390498-3390517 | None:intergenic | 30.0% | |
| AATATCTAAAGGCGATATTG+GGG | - | chr2_3:3390546-3390565 | Msa0271890:CDS | 30.0% | |
| ATACGAAATGACTGGTAAAT+GGG | + | chr2_3:3390582-3390601 | None:intergenic | 30.0% | |
| !! | AGGTTATTGACTTATTGTAG+AGG | + | chr2_3:3390623-3390642 | None:intergenic | 30.0% |
| !!! | TAAAAGAAGGCCTTTGTTTT+GGG | + | chr2_3:3390653-3390672 | None:intergenic | 30.0% |
| ! | TCTAATTTTGTTCACAAGAG+AGG | + | chr2_3:3390805-3390824 | None:intergenic | 30.0% |
| CTCTTGTGAACAAAATTAGA+AGG | - | chr2_3:3390805-3390824 | Msa0271890:five_prime_UTR | 30.0% | |
| TCTATCTTTCTTAGTTAGGG+AGG | + | chr2_3:3387858-3387877 | None:intergenic | 35.0% | |
| CATCTACAAACTATGAGGAA+AGG | + | chr2_3:3388059-3388078 | None:intergenic | 35.0% | |
| CACAAAAATCGCAATGAGAA+CGG | + | chr2_3:3388292-3388311 | None:intergenic | 35.0% | |
| !!! | ATTTTCAGGTTCTCGAGTAT+TGG | - | chr2_3:3388425-3388444 | Msa0271890:intron | 35.0% |
| !!! | TTTTCAGGTTCTCGAGTATT+GGG | - | chr2_3:3388426-3388445 | Msa0271890:intron | 35.0% |
| ! | ATGTAACTTGTGACTTTGCA+AGG | + | chr2_3:3388662-3388681 | None:intergenic | 35.0% |
| AAGGAAAGACTACATATGTG+TGG | + | chr2_3:3388847-3388866 | None:intergenic | 35.0% | |
| ! | TGCTATTTGCTTCTTTCTTG+TGG | - | chr2_3:3389126-3389145 | Msa0271890:intron | 35.0% |
| TAAACTCAGGACAACATTCA+AGG | + | chr2_3:3389377-3389396 | None:intergenic | 35.0% | |
| ATAAGTGCAACGAAGAGAAA+TGG | + | chr2_3:3389430-3389449 | None:intergenic | 35.0% | |
| !!! | TTCCTCTCCTTTTTTGTTGT+CGG | - | chr2_3:3389581-3389600 | Msa0271890:CDS | 35.0% |
| CATAAATTGAGGAGTAAGGA+CGG | + | chr2_3:3389610-3389629 | None:intergenic | 35.0% | |
| !!! | GTTTTAGAAAACCAACGCAA+AGG | + | chr2_3:3389710-3389729 | None:intergenic | 35.0% |
| GAACTATAGACATGCACATA+TGG | + | chr2_3:3389832-3389851 | None:intergenic | 35.0% | |
| ! | TGTTTTGTCATTGGAACCAA+GGG | + | chr2_3:3389862-3389881 | None:intergenic | 35.0% |
| ! | ATGTTTTGTCATTGGAACCA+AGG | + | chr2_3:3389863-3389882 | None:intergenic | 35.0% |
| ! | AGAAATGAAGGCTAGGATTT+TGG | - | chr2_3:3390047-3390066 | Msa0271890:intron | 35.0% |
| ! | GAAATGAAGGCTAGGATTTT+GGG | - | chr2_3:3390048-3390067 | Msa0271890:intron | 35.0% |
| ! | AAATGAAGGCTAGGATTTTG+GGG | - | chr2_3:3390049-3390068 | Msa0271890:intron | 35.0% |
| CGAATACATAAACGAGGATA+TGG | + | chr2_3:3390207-3390226 | None:intergenic | 35.0% | |
| TACGAAATGACTGGTAAATG+GGG | + | chr2_3:3390581-3390600 | None:intergenic | 35.0% | |
| CATACGAAATGACTGGTAAA+TGG | + | chr2_3:3390583-3390602 | None:intergenic | 35.0% | |
| !! | GTAAAAGAAGGCCTTTGTTT+TGG | + | chr2_3:3390654-3390673 | None:intergenic | 35.0% |
| ATCTTTCTTAGTTAGGGAGG+AGG | + | chr2_3:3387855-3387874 | None:intergenic | 40.0% | |
| TTCTCTTCATCTTCCTCTCT+AGG | + | chr2_3:3387987-3388006 | None:intergenic | 40.0% | |
| AGAGAGGAAGATGAAGAGAA+CGG | - | chr2_3:3387987-3388006 | Msa0271890:three_prime_UTR | 40.0% | |
| AACAGCAGAGAGAACGTTAA+CGG | + | chr2_3:3388123-3388142 | None:intergenic | 40.0% | |
| ! | CGTTCTCATTGCGATTTTTG+TGG | - | chr2_3:3388290-3388309 | Msa0271890:exon | 40.0% |
| TGGCGTAGTTTACGTTATCT+TGG | - | chr2_3:3389146-3389165 | Msa0271890:intron | 40.0% | |
| !! | ATGTTTTGAACTCAGACCCA+AGG | + | chr2_3:3389545-3389564 | None:intergenic | 40.0% |
| TAGGAGCGAATACATAAACG+AGG | + | chr2_3:3390213-3390232 | None:intergenic | 40.0% | |
| TGCTTCTATGAACACTTGAC+AGG | - | chr2_3:3390312-3390331 | Msa0271890:intron | 40.0% | |
| TATGAACACTTGACAGGAGT+TGG | - | chr2_3:3390318-3390337 | Msa0271890:intron | 40.0% | |
| !! | ATAAAAGGCATTCATAGGCC+AGG | + | chr2_3:3390461-3390480 | None:intergenic | 40.0% |
| ACGAAATGACTGGTAAATGG+GGG | + | chr2_3:3390580-3390599 | None:intergenic | 40.0% | |
| TTGTAGAGGCTCAAAACAGT+GGG | + | chr2_3:3390609-3390628 | None:intergenic | 40.0% | |
| ATTGTAGAGGCTCAAAACAG+TGG | + | chr2_3:3390610-3390629 | None:intergenic | 40.0% | |
| ! | TGAACTGTTGAAGTTGATCG+AGG | - | chr2_3:3390746-3390765 | Msa0271890:five_prime_UTR | 40.0% |
| ! | TGTTGAAGTTGATCGAGGAT+GGG | - | chr2_3:3390751-3390770 | Msa0271890:five_prime_UTR | 40.0% |
| ! | TTGTTCACAAGAGAGGTATG+AGG | + | chr2_3:3390798-3390817 | None:intergenic | 40.0% |
| TTCTTAGTTAGGGAGGAGGA+GGG | + | chr2_3:3387851-3387870 | None:intergenic | 45.0% | |
| TTTCTTAGTTAGGGAGGAGG+AGG | + | chr2_3:3387852-3387871 | None:intergenic | 45.0% | |
| GCAGAGAATAGCAGCTAAAG+CGG | + | chr2_3:3388096-3388115 | None:intergenic | 45.0% | |
| GCGATGATTCCGATGAATGA+AGG | + | chr2_3:3388216-3388235 | None:intergenic | 45.0% | |
| TGGTTCTCGTTGAGACTGAA+TGG | - | chr2_3:3388310-3388329 | Msa0271890:CDS | 45.0% | |
| AACCACGAACCTAGAACGTT+TGG | - | chr2_3:3388922-3388941 | Msa0271890:CDS | 45.0% | |
| ACCACGAACCTAGAACGTTT+GGG | - | chr2_3:3388923-3388942 | Msa0271890:CDS | 45.0% | |
| GCATTACACCCAAACGTTCT+AGG | + | chr2_3:3388934-3388953 | None:intergenic | 45.0% | |
| CACCGACAACAAAAAAGGAG+AGG | + | chr2_3:3389586-3389605 | None:intergenic | 45.0% | |
| ACGGTCACCGACAACAAAAA+AGG | + | chr2_3:3389591-3389610 | None:intergenic | 45.0% | |
| CTCTAGTGATCTCTTGCTTC+TGG | + | chr2_3:3389740-3389759 | None:intergenic | 45.0% | |
| ACACATCACCTCAAGATCCT+TGG | + | chr2_3:3389772-3389791 | None:intergenic | 45.0% | |
| CTATAGTTCTCTGTCTCCCT+TGG | - | chr2_3:3389843-3389862 | Msa0271890:intron | 45.0% | |
| GCAACTGCTTGTGACAGAAT+AGG | - | chr2_3:3390363-3390382 | Msa0271890:CDS | 45.0% | |
| AAGGCTGAAGAGACGACTAA+AGG | - | chr2_3:3390432-3390451 | Msa0271890:intron | 45.0% | |
| AGAGACGACTAAAGGAAACC+TGG | - | chr2_3:3390440-3390459 | Msa0271890:intron | 45.0% | |
| CTTCAACAGTTCAACGACGT+GGG | + | chr2_3:3390739-3390758 | None:intergenic | 45.0% | |
| ACTTCAACAGTTCAACGACG+TGG | + | chr2_3:3390740-3390759 | None:intergenic | 45.0% | |
| ! | CTGTTGAAGTTGATCGAGGA+TGG | - | chr2_3:3390750-3390769 | Msa0271890:five_prime_UTR | 45.0% |
| ! | GTTGAAGTTGATCGAGGATG+GGG | - | chr2_3:3390752-3390771 | Msa0271890:five_prime_UTR | 45.0% |
| AGACGTGAAGATGCCTAGAG+AGG | - | chr2_3:3387971-3387990 | Msa0271890:three_prime_UTR | 50.0% | |
| GAGGAAGATGAAGAGAACGG+TGG | - | chr2_3:3387990-3388009 | Msa0271890:three_prime_UTR | 50.0% | |
| ! | ACTCGACTCGTAGGTAGAAC+TGG | + | chr2_3:3388020-3388039 | None:intergenic | 50.0% |
| ! | CTTCGTTCAACTCGACTCGT+AGG | + | chr2_3:3388029-3388048 | None:intergenic | 50.0% |
| ! | ACCCAAACGTTCTAGGTTCG+TGG | + | chr2_3:3388927-3388946 | None:intergenic | 50.0% |
| ACTATAGCCAGGGAAAGCTC+TGG | + | chr2_3:3389067-3389086 | None:intergenic | 50.0% | |
| AGAGCTTTCCCTGGCTATAG+TGG | - | chr2_3:3389066-3389085 | Msa0271890:intron | 50.0% | |
| GAGCTTTCCCTGGCTATAGT+GGG | - | chr2_3:3389067-3389086 | Msa0271890:intron | 50.0% | |
| AGCTTTCCCTGGCTATAGTG+GGG | - | chr2_3:3389068-3389087 | Msa0271890:intron | 50.0% | |
| TTGAAGGGAGTCCTTTGCGT+TGG | - | chr2_3:3389696-3389715 | Msa0271890:intron | 50.0% | |
| CACTAGAGAGCAAGCAACCA+AGG | - | chr2_3:3389752-3389771 | Msa0271890:intron | 50.0% | |
| GCAAGCAACCAAGGATCTTG+AGG | - | chr2_3:3389761-3389780 | Msa0271890:intron | 50.0% | |
| GACTGGTAAATGGGGGAACA+CGG | + | chr2_3:3390573-3390592 | None:intergenic | 50.0% | |
| ! | TGGGAGGCATACGAAATGAC+TGG | + | chr2_3:3390590-3390609 | None:intergenic | 50.0% |
| TAGAGGCTCAAAACAGTGGG+AGG | + | chr2_3:3390606-3390625 | None:intergenic | 50.0% | |
| !!! | CCTTTGTTTTGGGTGTGGAG+AGG | + | chr2_3:3390643-3390662 | None:intergenic | 50.0% |
| CCTCTCCACACCCAAAACAA+AGG | - | chr2_3:3390640-3390659 | Msa0271890:CDS | 50.0% | |
| !!! | GAAGGCCTTTGTTTTGGGTG+TGG | + | chr2_3:3390648-3390667 | None:intergenic | 50.0% |
| ! | ACAAGAGAGGTATGAGGACG+AGG | + | chr2_3:3390792-3390811 | None:intergenic | 50.0% |
| !! | CAGGTTCTCGAGTATTGGGC+AGG | - | chr2_3:3388430-3388449 | Msa0271890:intron | 55.0% |
| !! | TTCTCGAGTATTGGGCAGGC+AGG | - | chr2_3:3388434-3388453 | Msa0271890:intron | 55.0% |
| !! | TCTCGAGTATTGGGCAGGCA+GGG | - | chr2_3:3388435-3388454 | Msa0271890:intron | 55.0% |
| GTGATGACCAGAGCTTTCCC+TGG | - | chr2_3:3389057-3389076 | Msa0271890:intron | 55.0% | |
| TTCGCTCCCCACTATAGCCA+GGG | + | chr2_3:3389077-3389096 | None:intergenic | 55.0% | |
| TTTCGCTCCCCACTATAGCC+AGG | + | chr2_3:3389078-3389097 | None:intergenic | 55.0% | |
| !! | CTCGAGTATTGGGCAGGCAG+GGG | - | chr2_3:3388436-3388455 | Msa0271890:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 3387839 | 3390846 | 3387839 | ID=Msa0271890;Name=Msa0271890 |
| chr2_3 | mRNA | 3387839 | 3390846 | 3387839 | ID=Msa0271890-mRNA-1;Parent=Msa0271890;Name=Msa0271890-mRNA-1;_AED=0.07;_eAED=0.07;_QI=142|1|1|1|1|1|6|462|190 |
| chr2_3 | exon | 3387839 | 3388351 | 3387839 | ID=Msa0271890-mRNA-1:exon:1740;Parent=Msa0271890-mRNA-1 |
| chr2_3 | exon | 3388903 | 3388983 | 3388903 | ID=Msa0271890-mRNA-1:exon:1739;Parent=Msa0271890-mRNA-1 |
| chr2_3 | exon | 3389518 | 3389635 | 3389518 | ID=Msa0271890-mRNA-1:exon:1738;Parent=Msa0271890-mRNA-1 |
| chr2_3 | exon | 3390212 | 3390252 | 3390212 | ID=Msa0271890-mRNA-1:exon:1737;Parent=Msa0271890-mRNA-1 |
| chr2_3 | exon | 3390329 | 3390424 | 3390329 | ID=Msa0271890-mRNA-1:exon:1736;Parent=Msa0271890-mRNA-1 |
| chr2_3 | exon | 3390519 | 3390846 | 3390519 | ID=Msa0271890-mRNA-1:exon:1735;Parent=Msa0271890-mRNA-1 |
| chr2_3 | five_prime_UTR | 3390705 | 3390846 | 3390705 | ID=Msa0271890-mRNA-1:five_prime_utr;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3390519 | 3390704 | 3390519 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3390329 | 3390424 | 3390329 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3390212 | 3390252 | 3390212 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3389518 | 3389635 | 3389518 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3388903 | 3388983 | 3388903 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | CDS | 3388301 | 3388351 | 3388301 | ID=Msa0271890-mRNA-1:cds;Parent=Msa0271890-mRNA-1 |
| chr2_3 | three_prime_UTR | 3387839 | 3388300 | 3387839 | ID=Msa0271890-mRNA-1:three_prime_utr;Parent=Msa0271890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
