AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1008450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008450 MtrunA17_Chr7g0218831 92.955 440 31 0 1 440 1 440 0.0 852
Msa1008450 MtrunA17_Chr7g0218841 88.889 441 48 1 1 440 1 441 0.0 812
Msa1008450 MtrunA17_Chr7g0218811 71.364 440 124 2 1 439 11 449 0.0 659
Msa1008450 MtrunA17_Chr7g0218821 67.184 451 135 3 1 439 1 450 0.0 639
Msa1008450 MtrunA17_Chr7g0218791 57.207 444 178 4 5 439 4 444 0.0 534
Msa1008450 MtrunA17_Chr3g0078841 32.766 470 274 10 5 436 9 474 1.81e-77 249
Msa1008450 MtrunA17_Chr6g0454341 31.915 470 278 10 5 436 9 474 9.54e-73 236
Msa1008450 MtrunA17_Chr7g0217881 32.181 463 270 12 5 436 9 458 7.84e-71 231
Msa1008450 MtrunA17_Chr6g0454401 31.435 474 278 13 5 436 9 477 1.29e-70 231
Msa1008450 MtrunA17_Chr5g0448551 32.420 438 272 12 5 426 6 435 2.23e-70 229
Msa1008450 MtrunA17_Chr6g0454181 31.078 473 280 11 5 436 9 476 2.40e-70 230
Msa1008450 MtrunA17_Chr3g0118671 32.340 470 276 11 6 437 6 471 4.45e-70 229
Msa1008450 MtrunA17_Chr8g0336331 31.130 469 280 10 6 436 10 473 2.86e-69 227
Msa1008450 MtrunA17_Chr2g0278711 32.696 471 273 12 5 437 10 474 6.68e-69 226
Msa1008450 MtrunA17_Chr6g0454321 31.739 460 268 13 6 425 10 463 1.01e-68 230
Msa1008450 MtrunA17_Chr6g0453951 30.508 472 284 10 5 436 56 523 1.05e-68 227
Msa1008450 MtrunA17_Chr6g0454261 30.444 473 283 9 5 436 9 476 2.29e-68 225
Msa1008450 MtrunA17_Chr6g0454191 31.078 473 281 14 5 436 9 477 6.24e-68 224
Msa1008450 MtrunA17_Chr3g0118661 30.655 473 279 10 5 436 12 476 6.44e-68 224
Msa1008450 MtrunA17_Chr3g0118691 32.203 472 274 12 5 436 14 479 7.22e-68 224
Msa1008450 MtrunA17_Chr6g0454141 30.737 475 279 13 5 436 9 476 1.17e-67 223
Msa1008450 MtrunA17_Chr3g0118701 31.847 471 277 11 5 436 14 479 2.03e-67 223
Msa1008450 MtrunA17_Chr6g0453961 31.172 478 274 13 5 436 18 486 5.51e-67 221
Msa1008450 MtrunA17_Chr7g0249981 30.416 457 276 14 6 437 25 464 6.76e-67 221
Msa1008450 MtrunA17_Chr6g0454151 30.638 470 284 12 5 436 9 474 9.87e-67 221
Msa1008450 MtrunA17_Chr8g0359821 31.356 472 278 13 5 436 9 474 1.23e-66 220
Msa1008450 MtrunA17_Chr6g0454361 30.737 475 285 10 3 437 8 478 2.63e-66 219
Msa1008450 MtrunA17_Chr6g0464871 31.590 459 274 12 4 437 21 464 5.44e-66 218
Msa1008450 MtrunA17_Chr6g0454331 30.672 476 282 12 5 437 6 476 8.40e-66 218
Msa1008450 MtrunA17_Chr3g0118711 30.932 472 280 13 5 436 12 477 9.76e-66 218
Msa1008450 MtrunA17_Chr5g0426431 32.770 473 270 13 4 436 10 474 6.85e-65 216
Msa1008450 MtrunA17_Chr3g0118771 30.998 471 281 12 5 436 20 485 2.00e-64 215
Msa1008450 MtrunA17_Chr3g0092641 32.409 469 277 13 4 436 10 474 2.29e-63 212
Msa1008450 MtrunA17_Chr6g0464921 31.236 461 272 14 5 437 10 453 5.21e-63 210
Msa1008450 MtrunA17_Chr6g0454301 30.361 471 284 11 5 436 262 727 6.13e-63 216
Msa1008450 MtrunA17_Chr6g0454301 37.281 228 131 4 217 436 3 226 1.35e-42 159
Msa1008450 MtrunA17_Chr6g0454291 29.025 472 291 10 5 436 6 473 1.38e-62 209
Msa1008450 MtrunA17_Chr6g0464861 30.652 460 274 14 5 437 10 451 1.62e-62 209
Msa1008450 MtrunA17_Chr6g0454131 30.042 476 280 11 5 436 9 475 1.66e-62 209
Msa1008450 MtrunA17_Chr6g0454121 29.832 476 281 10 5 436 9 475 2.46e-62 209
Msa1008450 MtrunA17_Chr6g0454201 31.158 475 281 11 3 436 8 477 2.98e-62 209
Msa1008450 MtrunA17_Chr6g0464881 29.540 457 286 11 4 437 9 452 3.69e-62 208
Msa1008450 MtrunA17_Chr6g0454211 29.449 472 289 11 5 436 296 763 5.52e-62 214
Msa1008450 MtrunA17_Chr6g0454211 36.875 160 60 4 210 356 105 236 2.42e-22 100
Msa1008450 MtrunA17_Chr4g0053321 30.197 457 287 9 7 437 27 477 1.65e-61 207
Msa1008450 MtrunA17_Chr4g0053501 30.803 461 281 13 6 437 11 462 1.95e-61 207
Msa1008450 MtrunA17_Chr6g0452771 31.013 474 279 12 5 436 9 476 4.68e-61 206
Msa1008450 MtrunA17_Chr7g0250001 29.322 457 281 12 6 437 6 445 1.91e-60 203
Msa1008450 MtrunA17_Chr5g0423981 29.935 461 266 12 5 436 9 441 2.01e-60 203
Msa1008450 MtrunA17_Chr5g0414331 31.155 459 271 15 6 438 13 452 2.49e-60 203
Msa1008450 MtrunA17_Chr6g0464841 29.694 458 284 11 4 437 9 452 2.60e-60 203
Msa1008450 MtrunA17_Chr3g0118751 31.263 467 256 13 5 436 5 441 2.01e-59 201
Msa1008450 MtrunA17_Chr5g0414321 29.870 462 269 14 6 436 11 448 2.37e-59 201
Msa1008450 MtrunA17_Chr5g0412111 30.462 476 270 11 5 438 4 460 1.33e-58 199
Msa1008450 MtrunA17_Chr4g0050341 28.958 480 283 13 5 436 18 487 2.29e-58 199
Msa1008450 MtrunA17_Chr1g0207981 27.922 462 297 8 6 436 13 469 3.52e-58 198
Msa1008450 MtrunA17_Chr6g0454351 28.330 473 276 12 5 436 11 461 4.66e-58 197
Msa1008450 MtrunA17_Chr5g0412131 30.380 474 276 13 4 438 10 468 2.05e-57 196
Msa1008450 MtrunA17_Chr3g0112761 31.126 453 276 14 6 436 8 446 1.41e-55 191
Msa1008450 MtrunA17_Chr8g0380531 29.783 460 281 13 6 437 10 455 1.78e-55 190
Msa1008450 MtrunA17_Chr8g0377921 28.694 467 292 13 4 436 1 460 3.50e-54 187
Msa1008450 MtrunA17_Chr7g0249931 27.609 460 287 13 6 437 40 481 2.92e-53 185
Msa1008450 MtrunA17_Chr3g0112771 29.490 451 282 13 8 437 14 449 1.08e-52 183
Msa1008450 MtrunA17_Chr3g0121991 29.412 476 281 14 6 437 79 543 2.13e-52 184
Msa1008450 MtrunA17_Chr5g0412101 29.498 478 274 12 5 438 11 469 1.55e-51 180
Msa1008450 MtrunA17_Chr6g0454251 28.718 390 241 8 5 357 6 395 9.73e-50 174
Msa1008450 MtrunA17_Chr6g0454271 36.000 250 135 6 207 436 39 283 4.47e-49 169
Msa1008450 MtrunA17_Chr6g0454221 39.738 229 118 4 224 436 3 227 5.48e-49 169
Msa1008450 MtrunA17_Chr7g0243631 29.339 484 276 15 6 436 13 483 5.88e-49 174
Msa1008450 MtrunA17_Chr3g0098111 28.998 469 284 18 6 436 9 466 1.25e-48 172
Msa1008450 MtrunA17_Chr3g0122001 29.228 479 276 17 6 436 486 949 2.51e-48 177
Msa1008450 MtrunA17_Chr3g0122001 28.926 484 272 18 6 436 6 470 2.65e-47 174
Msa1008450 MtrunA17_Chr7g0243681 28.631 482 277 16 6 436 11 476 2.85e-48 172
Msa1008450 MtrunA17_Chr1g0161351 28.510 463 294 13 6 436 37 494 3.19e-48 172
Msa1008450 MtrunA17_Chr8g0377941 28.078 463 286 14 8 436 9 458 7.53e-48 170
Msa1008450 MtrunA17_Chr5g0401721 28.785 469 285 15 8 437 10 468 1.42e-47 170
Msa1008450 MtrunA17_Chr8g0336691 28.392 479 283 13 6 440 13 475 2.15e-47 175
Msa1008450 MtrunA17_Chr8g0336691 28.270 474 290 13 6 440 919 1381 4.57e-45 168
Msa1008450 MtrunA17_Chr8g0336691 28.326 466 272 15 6 440 480 914 2.86e-41 157
Msa1008450 MtrunA17_Chr8g0336651 28.243 478 287 15 6 440 781 1245 2.32e-47 175
Msa1008450 MtrunA17_Chr8g0336651 26.667 480 288 15 6 440 6 466 4.69e-40 153
Msa1008450 MtrunA17_Chr8g0336651 32.061 262 149 6 191 440 532 776 2.63e-37 145
Msa1008450 MtrunA17_Chr1g0207971 27.932 469 274 15 6 436 8 450 3.28e-47 168
Msa1008450 MtrunA17_Chr7g0232411 28.051 467 292 15 6 437 6 463 3.39e-47 169
Msa1008450 MtrunA17_Chr7g0275681 28.364 483 281 15 4 436 10 477 6.12e-47 168
Msa1008450 MtrunA17_Chr8g0347281 28.205 468 277 19 5 432 17 465 1.59e-46 167
Msa1008450 MtrunA17_Chr7g0243871 27.778 468 290 10 8 436 11 469 2.73e-46 166
Msa1008450 MtrunA17_Chr7g0232331 27.716 451 281 12 1 417 1 440 5.53e-46 165
Msa1008450 MtrunA17_Chr5g0431441 27.391 460 290 12 6 436 18 462 7.78e-46 165
Msa1008450 MtrunA17_Chr6g0459311 27.623 467 283 14 9 435 16 467 9.34e-46 165
Msa1008450 MtrunA17_Chr1g0207861 28.723 470 284 17 6 436 8 465 1.12e-45 165
Msa1008450 MtrunA17_Chr8g0347271 26.964 471 279 17 5 432 18 466 1.47e-45 164
Msa1008450 MtrunA17_Chr7g0232391 27.215 474 294 14 6 440 6 467 2.95e-45 163
Msa1008450 MtrunA17_Chr7g0232401 27.681 401 253 12 61 435 74 463 3.31e-45 163
Msa1008450 MtrunA17_Chr8g0335161 28.478 460 259 16 6 418 6 442 1.06e-44 162
Msa1008450 MtrunA17_Chr1g0207931 26.797 459 252 14 6 436 92 494 1.77e-44 162
Msa1008450 MtrunA17_Chr1g0207951 28.692 474 265 17 6 436 124 567 2.31e-44 166
Msa1008450 MtrunA17_Chr1g0207951 27.719 469 282 17 6 436 656 1105 6.92e-43 161
Msa1008450 MtrunA17_Chr7g0275511 26.115 471 306 13 5 440 14 477 2.67e-44 161
Msa1008450 MtrunA17_Chr4g0032331 29.567 416 250 14 6 392 8 409 3.07e-44 160
Msa1008450 MtrunA17_Chr1g0153451 27.235 481 283 13 6 440 6 465 1.40e-43 159
Msa1008450 MtrunA17_Chr8g0365811 28.326 466 289 14 8 436 497 954 4.26e-43 162
Msa1008450 MtrunA17_Chr8g0365811 28.406 433 256 16 6 396 9 429 2.19e-41 157
Msa1008450 MtrunA17_Chr7g0243931 27.557 479 291 14 6 436 17 487 4.28e-43 158
Msa1008450 MtrunA17_Chr8g0336741 27.409 467 272 13 6 430 13 454 4.77e-43 157
Msa1008450 MtrunA17_Chr4g0060511 27.530 494 275 17 6 436 11 484 4.95e-43 158
Msa1008450 MtrunA17_Chr7g0232311 26.316 475 296 14 5 440 5 464 2.22e-42 155
Msa1008450 MtrunA17_Chr6g0454171 35.950 242 117 6 210 436 88 306 3.34e-42 151
Msa1008450 MtrunA17_Chr1g0207831 28.419 468 281 18 7 436 9 460 3.91e-42 155
Msa1008450 MtrunA17_Chr7g0232341 26.580 459 276 11 1 417 1 440 4.95e-42 154
Msa1008450 MtrunA17_Chr7g0249961 35.498 231 130 5 222 437 31 257 1.28e-41 149
Msa1008450 MtrunA17_Chr3g0118721 37.745 204 116 4 240 436 87 286 1.57e-41 149
Msa1008450 MtrunA17_Chr7g0243771 26.360 478 294 16 6 436 6 472 1.69e-41 154
Msa1008450 MtrunA17_Chr6g0486251 27.505 469 281 17 9 435 9 460 2.94e-41 152
Msa1008450 MtrunA17_Chr6g0486201 27.505 469 281 17 9 435 9 460 2.94e-41 152
Msa1008450 MtrunA17_Chr6g0462521 37.037 216 121 5 223 428 229 439 3.49e-41 152
Msa1008450 MtrunA17_Chr4g0044521 27.897 466 280 16 11 436 14 463 3.59e-41 152
Msa1008450 MtrunA17_Chr8g0373301 26.700 397 257 12 68 435 71 462 1.68e-40 150
Msa1008450 MtrunA17_Chr5g0393591 25.764 458 277 14 3 436 14 432 1.68e-40 150
Msa1008450 MtrunA17_Chr7g0243951 26.931 479 293 15 6 436 11 480 2.28e-40 150
Msa1008450 MtrunA17_Chr8g0334851 25.714 455 289 13 1 417 1 444 2.49e-40 150
Msa1008450 MtrunA17_Chr8g0335141 27.368 475 295 15 1 437 4 466 2.64e-40 150
Msa1008450 MtrunA17_Chr7g0243781 28.189 486 264 19 10 436 13 472 3.79e-40 150
Msa1008450 MtrunA17_Chr8g0339461 29.834 362 218 11 106 435 110 467 4.88e-40 149
Msa1008450 MtrunA17_Chr4g0044511 27.061 473 292 16 6 436 40 501 7.56e-40 149
Msa1008450 MtrunA17_Chr5g0426401 35.345 232 142 4 211 436 78 307 8.37e-40 145
Msa1008450 MtrunA17_Chr6g0449931 25.910 467 294 15 6 432 6 460 1.00e-39 148
Msa1008450 MtrunA17_Chr7g0243861 27.122 483 288 16 6 436 14 484 1.02e-39 149
Msa1008450 MtrunA17_Chr8g0339451 28.133 391 244 12 77 435 74 459 1.54e-39 147
Msa1008450 MtrunA17_Chr7g0243761 27.848 474 266 15 6 436 11 451 2.06e-39 147
Msa1008450 MtrunA17_Chr6g0462571 27.226 393 238 12 80 435 76 457 2.10e-39 147
Msa1008450 MtrunA17_Chr8g0336731 26.724 464 275 14 8 430 34 473 3.80e-39 147
Msa1008450 MtrunA17_Chr7g0265041 26.489 487 294 14 4 436 9 485 4.42e-39 147
Msa1008450 MtrunA17_Chr6g0462531 36.486 222 126 5 224 435 244 460 5.13e-39 146
Msa1008450 MtrunA17_Chr7g0243801 26.582 474 290 17 10 436 11 473 6.03e-39 146
Msa1008450 MtrunA17_Chr7g0265141 27.642 492 277 19 6 436 9 482 6.43e-39 146
Msa1008450 MtrunA17_Chr8g0334861 30.051 396 225 14 77 437 83 461 6.58e-39 146
Msa1008450 MtrunA17_Chr6g0462541 28.261 368 221 10 97 435 106 459 7.09e-39 146
Msa1008450 MtrunA17_Chr8g0339441 30.548 347 180 13 129 435 100 425 2.02e-38 144
Msa1008450 MtrunA17_Chr5g0419761 27.990 418 245 13 6 381 9 412 3.11e-38 144
Msa1008450 MtrunA17_Chr6g0462551 25.376 465 302 12 7 435 5 460 7.67e-38 143
Msa1008450 MtrunA17_Chr5g0403641 26.782 463 250 18 6 420 59 480 7.75e-38 144
Msa1008450 MtrunA17_Chr3g0106231 25.647 464 285 15 3 436 15 448 1.41e-37 142
Msa1008450 MtrunA17_Chr7g0235051 27.484 473 260 18 6 432 11 446 2.39e-37 142
Msa1008450 MtrunA17_Chr7g0265101 26.283 487 291 16 6 436 9 483 2.73e-37 142
Msa1008450 MtrunA17_Chr7g0265151 25.773 485 293 18 6 436 9 480 3.75e-37 141
Msa1008450 MtrunA17_Chr2g0307961 24.353 464 303 10 5 433 12 462 1.38e-36 139
Msa1008450 MtrunA17_Chr7g0265051 25.257 487 294 16 6 436 9 481 1.61e-36 140
Msa1008450 MtrunA17_Chr5g0431361 25.702 463 290 16 6 437 12 451 3.17e-36 138
Msa1008450 MtrunA17_Chr4g0066221 28.337 487 271 20 6 436 13 477 5.99e-36 138
Msa1008450 MtrunA17_Chr8g0361371 25.499 451 273 15 9 416 10 440 7.76e-36 137
Msa1008450 MtrunA17_Chr8g0339631 27.970 404 248 14 68 435 68 464 9.07e-36 137
Msa1008450 MtrunA17_Chr2g0329111 24.686 478 308 14 8 439 8 479 1.37e-35 137
Msa1008450 MtrunA17_Chr5g0448521 24.364 472 300 14 10 438 9 466 1.53e-35 137
Msa1008450 MtrunA17_Chr8g0366391 28.184 479 283 16 6 436 9 474 1.69e-35 137
Msa1008450 MtrunA17_Chr1g0153461 35.047 214 119 6 247 440 1 214 1.71e-35 130
Msa1008450 MtrunA17_Chr5g0429711 26.840 462 293 14 6 436 11 458 1.76e-35 136
Msa1008450 MtrunA17_Chr4g0011051 25.205 488 296 16 6 436 9 484 2.65e-35 136
Msa1008450 MtrunA17_Chr8g0339601 40.102 197 97 7 229 405 99 294 2.99e-35 133
Msa1008450 MtrunA17_Chr5g0431371 25.652 460 291 13 6 437 10 446 3.92e-35 135
Msa1008450 MtrunA17_Chr4g0066281 26.050 476 281 12 7 436 13 463 1.52e-34 134
Msa1008450 MtrunA17_Chr5g0440421 25.358 489 301 18 5 436 9 490 2.85e-34 134
Msa1008450 MtrunA17_Chr8g0355011 26.879 346 205 7 106 436 46 358 2.99e-34 131
Msa1008450 MtrunA17_Chr5g0442491 22.785 474 312 12 10 438 9 473 1.14e-33 132
Msa1008450 MtrunA17_Chr8g0334831 24.615 455 280 14 9 416 9 447 1.54e-33 131
Msa1008450 MtrunA17_Chr5g0431401 24.892 462 292 14 6 437 10 446 1.92e-33 130
Msa1008450 MtrunA17_Chr5g0431421 25.163 461 292 14 6 437 10 446 2.88e-33 130
Msa1008450 MtrunA17_Chr7g0243851 25.625 480 257 17 6 436 11 439 2.88e-33 130
Msa1008450 MtrunA17_Chr1g0159551 23.810 462 294 14 11 437 19 457 5.97e-33 129
Msa1008450 MtrunA17_Chr4g0044501 26.439 469 301 16 6 436 10 472 7.26e-33 129
Msa1008450 MtrunA17_Chr4g0066261 26.033 484 287 18 6 436 13 478 9.81e-33 129
Msa1008450 MtrunA17_Chr6g0454371 35.673 171 100 3 272 436 1 167 9.86e-33 122
Msa1008450 MtrunA17_Chr4g0072771 26.269 453 297 16 6 436 25 462 1.03e-32 129
Msa1008450 MtrunA17_Chr8g0382021 24.262 474 286 13 11 437 39 486 1.58e-32 129
Msa1008450 MtrunA17_Chr6g0463891 24.843 479 299 16 8 436 14 481 1.83e-32 128
Msa1008450 MtrunA17_Chr4g0044481 26.485 404 234 13 6 379 27 397 2.70e-32 127
Msa1008450 MtrunA17_Chr4g0066201 27.922 462 286 16 10 436 22 471 5.96e-32 127
Msa1008450 MtrunA17_Chr4g0066131 25.311 482 282 17 10 438 17 473 8.61e-32 126
Msa1008450 MtrunA17_Chr3g0079731 34.286 210 116 6 249 436 268 477 1.43e-31 125
Msa1008450 MtrunA17_Chr1g0179901 24.138 493 296 17 6 437 16 491 2.29e-31 125
Msa1008450 MtrunA17_Chr8g0374931 25.367 477 299 15 6 436 13 478 4.12e-31 124
Msa1008450 MtrunA17_Chr7g0243711 33.010 206 119 5 250 436 108 313 6.08e-31 121
Msa1008450 MtrunA17_Chr5g0428081 26.415 477 292 19 6 436 13 476 8.79e-31 124
Msa1008450 MtrunA17_Chr5g0442541 23.992 471 301 15 10 438 9 464 8.97e-31 123
Msa1008450 MtrunA17_Chr4g0066151 25.519 482 277 18 10 436 22 476 9.41e-31 124
Msa1008450 MtrunA17_Chr4g0066171 26.981 467 283 16 10 436 25 473 9.67e-31 123
Msa1008450 MtrunA17_Chr1g0173121 33.180 217 105 5 249 437 256 460 1.20e-30 123
Msa1008450 MtrunA17_Chr8g0336261 39.716 141 77 3 272 408 1 137 1.86e-30 114
Msa1008450 MtrunA17_Chr5g0429681 25.532 470 294 16 7 437 45 497 3.22e-30 122
Msa1008450 MtrunA17_Chr4g0014061 24.094 469 308 12 9 438 12 471 3.41e-30 122
Msa1008450 MtrunA17_Chr5g0442601 23.285 481 307 16 8 438 406 874 6.05e-30 123
Msa1008450 MtrunA17_Chr5g0442601 31.579 171 94 5 228 376 166 335 1.10e-19 92.0
Msa1008450 MtrunA17_Chr5g0419771 32.536 209 119 4 250 436 301 509 7.23e-30 121
Msa1008450 MtrunA17_Chr7g0241781 26.914 431 263 16 6 418 9 405 1.05e-29 120
Msa1008450 MtrunA17_Chr5g0442561 22.669 472 313 17 10 438 9 471 1.11e-29 120
Msa1008450 MtrunA17_Chr5g0442521 22.316 475 314 15 10 438 9 474 1.18e-29 120
Msa1008450 MtrunA17_Chr8g0374901 24.895 478 292 14 9 436 15 475 1.34e-29 120
Msa1008450 MtrunA17_Chr2g0294931 24.788 472 302 12 10 436 15 478 1.47e-29 120
Msa1008450 MtrunA17_Chr7g0243811 26.277 411 244 14 18 392 1 388 2.17e-29 118
Msa1008450 MtrunA17_Chr4g0072761 25.556 450 305 15 4 436 13 449 2.25e-29 119
Msa1008450 MtrunA17_Chr3g0106251 28.521 284 167 7 172 436 24 290 2.46e-29 116
Msa1008450 MtrunA17_Chr8g0361411 23.840 474 295 15 6 440 8 454 2.47e-29 119
Msa1008450 MtrunA17_Chr5g0432731 28.205 273 162 6 188 437 33 294 2.58e-29 116
Msa1008450 MtrunA17_Chr5g0410941 24.313 473 305 14 6 436 25 486 2.69e-29 119
Msa1008450 MtrunA17_Chr2g0294921 24.738 477 302 14 6 436 162 627 2.71e-29 120
Msa1008450 MtrunA17_Chr8g0374971 24.792 480 296 14 7 436 13 477 2.95e-29 119
Msa1008450 MtrunA17_Chr5g0401851 23.711 485 298 18 8 436 12 480 3.82e-29 119
Msa1008450 MtrunA17_Chr7g0250021 28.571 336 200 11 6 319 12 329 4.88e-29 116
Msa1008450 MtrunA17_Chr8g0369341 26.609 466 300 17 6 436 7 465 7.17e-29 118
Msa1008450 MtrunA17_Chr5g0442581 22.785 474 314 13 10 438 9 475 8.69e-29 118
Msa1008450 MtrunA17_Chr7g0243911 33.333 189 110 4 245 417 17 205 1.02e-28 112
Msa1008450 MtrunA17_Chr5g0416741 24.536 485 291 18 8 436 15 480 1.31e-28 117
Msa1008450 MtrunA17_Chr4g0029131 26.340 429 268 15 6 406 12 420 1.52e-28 118
Msa1008450 MtrunA17_Chr7g0265111 32.850 207 119 5 250 436 306 512 1.91e-28 117
Msa1008450 MtrunA17_Chr7g0243611 40.441 136 75 2 250 379 136 271 2.59e-28 113
Msa1008450 MtrunA17_Chr6g0463861 26.042 480 284 19 6 436 13 470 3.67e-28 116
Msa1008450 MtrunA17_Chr2g0294941 30.522 249 143 7 209 434 123 364 4.49e-28 114
Msa1008450 MtrunA17_Chr5g0420801 26.078 464 295 18 6 436 7 455 4.83e-28 115
Msa1008450 MtrunA17_Chr8g0370941 24.565 460 262 16 6 402 8 445 1.25e-27 115
Msa1008450 MtrunA17_Chr7g0218311 31.140 228 133 6 233 436 253 480 1.44e-27 114
Msa1008450 MtrunA17_Chr5g0442511 21.730 474 296 16 8 438 51 492 1.46e-27 114
Msa1008450 MtrunA17_Chr1g0196851 24.598 435 271 18 6 406 49 460 1.78e-27 114
Msa1008450 MtrunA17_Chr7g0241801 25.287 435 265 18 6 418 9 405 2.51e-27 113
Msa1008450 MtrunA17_Chr8g0355221 23.800 479 303 15 8 436 17 483 8.49e-27 112
Msa1008450 MtrunA17_Chr1g0165701 25.105 478 295 20 8 436 17 480 8.88e-27 112
Msa1008450 MtrunA17_Chr4g0029151 25.814 430 269 16 6 406 20 428 9.93e-27 112
Msa1008450 MtrunA17_Chr5g0409591 31.771 192 110 5 236 408 263 452 1.38e-26 111
Msa1008450 MtrunA17_Chr8g0367221 24.784 464 309 15 6 438 12 466 1.96e-26 112
Msa1008450 MtrunA17_Chr8g0367221 24.444 450 284 15 6 417 798 1229 1.97e-25 110
Msa1008450 MtrunA17_Chr8g0367221 25.821 457 301 17 6 432 1288 1736 2.82e-23 103
Msa1008450 MtrunA17_Chr8g0374941 24.262 474 288 16 9 434 14 464 4.16e-26 112
Msa1008450 MtrunA17_Chr8g0374941 30.841 214 121 7 249 436 1202 1414 1.95e-25 109
Msa1008450 MtrunA17_Chr8g0374941 25.390 449 264 16 9 406 479 907 1.35e-24 107
Msa1008450 MtrunA17_Chr7g0232351 26.263 396 224 14 6 356 6 378 4.58e-26 108
Msa1008450 MtrunA17_Chr8g0336251 24.561 456 276 14 6 416 7 439 5.35e-26 109
Msa1008450 MtrunA17_Chr8g0336321 24.561 456 276 14 6 416 7 439 1.28e-25 108
Msa1008450 MtrunA17_Chr8g0350881 32.243 214 120 5 249 437 265 478 2.81e-25 107
Msa1008450 MtrunA17_Chr4g0040711 32.512 203 122 5 228 420 242 439 1.02e-24 105
Msa1008450 MtrunA17_Chr4g0040691 25.055 455 278 17 6 420 8 439 2.49e-24 105
Msa1008450 MtrunA17_Chr6g0454231 29.204 226 115 5 217 436 29 215 3.03e-24 104
Msa1008450 MtrunA17_Chr6g0454231 27.044 159 107 3 5 154 249 407 5.15e-13 70.9
Msa1008450 MtrunA17_Chr6g0463851 22.934 484 303 15 6 436 13 479 6.71e-24 103
Msa1008450 MtrunA17_Chr2g0302991 24.219 384 223 11 98 436 99 459 4.98e-23 101
Msa1008450 MtrunA17_Chr3g0079711 30.978 184 105 6 275 436 2 185 5.12e-23 95.9
Msa1008450 MtrunA17_Chr2g0283041 33.333 162 102 4 250 405 256 417 3.34e-22 98.6
Msa1008450 MtrunA17_Chr1g0207881 36.508 126 75 3 316 436 256 381 7.37e-22 97.1
Msa1008450 MtrunA17_Chr4g0042931 23.395 483 298 16 6 440 7 465 2.25e-21 96.3
Msa1008450 MtrunA17_Chr6g0466841 23.404 423 290 13 6 406 18 428 5.22e-21 95.1
Msa1008450 MtrunA17_Chr2g0302961 27.500 240 145 6 217 436 232 462 5.72e-21 95.1
Msa1008450 MtrunA17_Chr2g0278721 37.654 162 89 5 252 406 785 941 7.79e-21 95.5
Msa1008450 MtrunA17_Chr2g0278721 22.824 425 295 14 6 406 15 430 2.43e-18 87.8
Msa1008450 MtrunA17_Chr6g0466831 22.673 419 298 10 6 406 18 428 7.34e-20 91.7
Msa1008450 MtrunA17_Chr2g0319761 26.351 444 265 17 1 406 1 420 7.96e-20 91.7
Msa1008450 MtrunA17_Chr4g0069611 28.889 225 146 7 204 416 212 434 1.12e-19 91.3
Msa1008450 MtrunA17_Chr8g0337381 34.959 123 78 2 318 438 3 125 1.25e-19 84.7
Msa1008450 MtrunA17_Chr3g0092031 31.646 158 104 3 252 406 6 162 1.32e-19 86.7
Msa1008450 MtrunA17_Chr2g0278741 23.788 433 281 14 6 406 97 512 1.47e-19 91.3
Msa1008450 MtrunA17_Chr6g0453981 30.660 212 111 7 115 297 1 205 5.35e-19 85.9
Msa1008450 MtrunA17_Chr2g0302851 23.765 425 286 14 6 406 16 426 6.43e-19 89.0
Msa1008450 MtrunA17_Chr8g0357361 35.075 134 83 2 249 379 117 249 6.88e-19 86.3
Msa1008450 MtrunA17_Chr5g0427571 26.423 246 146 8 198 416 36 273 9.24e-19 86.7
Msa1008450 MtrunA17_Chr4g0042891 27.660 235 146 5 224 440 239 467 1.49e-18 87.8
Msa1008450 MtrunA17_Chr5g0416821 22.474 485 290 19 8 436 16 470 5.18e-18 86.3
Msa1008450 MtrunA17_Chr4g0029161 24.408 422 257 16 6 406 12 392 8.98e-18 85.1
Msa1008450 MtrunA17_Chr4g0039881 24.515 412 279 14 16 406 2 402 1.26e-17 84.7
Msa1008450 MtrunA17_Chr6g0464091 32.143 196 103 8 252 434 279 457 2.19e-17 84.3
Msa1008450 MtrunA17_Chr5g0431431 28.319 226 146 4 159 374 105 324 2.42e-17 83.2
Msa1008450 MtrunA17_Chr2g0319791 33.155 187 112 7 250 423 257 443 4.62e-17 83.2
Msa1008450 MtrunA17_Chr2g0319731 24.138 435 274 14 6 406 25 437 6.15e-17 82.8
Msa1008450 MtrunA17_Chr5g0426411 29.697 165 106 4 5 160 11 174 6.91e-17 78.2
Msa1008450 MtrunA17_Chr2g0319751 32.620 187 113 7 250 423 734 920 1.48e-15 79.3
Msa1008450 MtrunA17_Chr6g0482061 25.092 271 171 8 184 436 220 476 6.94e-15 76.6
Msa1008450 MtrunA17_Chr7g0231631 27.041 196 128 6 250 436 67 256 7.49e-15 74.7
Msa1008450 MtrunA17_Chr6g0454281 28.834 163 104 3 5 155 9 171 1.25e-14 72.8
Msa1008450 MtrunA17_Chr4g0066141 32.609 138 77 4 315 437 213 349 1.37e-14 75.1
Msa1008450 MtrunA17_Chr7g0243731 40.000 75 44 1 315 388 6 80 2.12e-14 68.2
Msa1008450 MtrunA17_Chr2g0319801 23.112 437 276 16 6 406 8 420 2.69e-14 74.7
Msa1008450 MtrunA17_Chr8g0336271 26.752 157 107 2 6 154 10 166 9.07e-14 71.6
Msa1008450 MtrunA17_Chr6g0453941 34.167 120 65 2 192 297 139 258 4.92e-13 69.3
Msa1008450 MtrunA17_Chr2g0321331 31.373 153 82 6 260 406 94 229 6.63e-13 68.9
Msa1008450 MtrunA17_Chr6g0454391 42.029 69 36 1 331 399 11 75 1.13e-11 62.0
Msa1008450 MtrunA17_Chr8g0334841 34.127 126 73 3 189 307 22 144 1.71e-11 62.8
Msa1008450 MtrunA17_Chr6g0454111 37.647 85 51 1 210 292 99 183 3.61e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008450 AT3G02100.1 41.319 455 238 8 5 438 12 458 8.68e-122 362
Msa1008450 AT1G05675.1 31.947 457 274 12 6 437 6 450 6.77e-71 231
Msa1008450 AT1G05680.1 32.609 460 267 13 6 437 6 450 1.05e-69 228
Msa1008450 AT1G22370.2 33.172 413 245 9 2 384 9 420 8.37e-68 224
Msa1008450 AT1G22360.1 31.778 450 259 11 6 416 10 450 7.93e-66 219
Msa1008450 AT1G22400.1 32.063 446 254 12 5 410 12 448 1.12e-65 218
Msa1008450 AT1G22360.2 32.028 434 251 10 6 400 10 438 1.99e-64 214
Msa1008450 AT3G22250.1 30.022 453 265 12 5 421 7 443 7.04e-64 213
Msa1008450 AT1G22340.1 30.398 477 277 15 5 436 12 478 3.38e-63 212
Msa1008450 AT3G46670.1 30.330 455 275 12 8 438 11 447 1.25e-62 209
Msa1008450 AT1G22380.1 31.461 445 257 11 5 410 12 447 1.02e-61 208
Msa1008450 AT3G21560.1 29.149 470 284 13 5 436 11 469 3.80e-61 207
Msa1008450 AT1G78270.1 31.250 464 267 13 5 428 12 463 4.05e-61 206
Msa1008450 AT3G46660.1 29.425 452 285 12 8 438 16 454 5.78e-60 202
Msa1008450 AT3G55710.1 32.397 463 264 17 6 437 8 452 1.26e-57 196
Msa1008450 AT5G59590.1 28.795 448 291 11 6 436 10 446 1.23e-56 194
Msa1008450 AT2G31750.1 29.194 459 280 10 8 437 10 452 4.17e-56 192
Msa1008450 AT2G31750.2 29.194 459 280 10 8 437 10 452 1.00e-55 192
Msa1008450 AT5G59580.1 29.412 459 283 14 1 436 4 444 1.02e-54 189
Msa1008450 AT3G55700.1 30.989 455 277 17 6 437 8 448 1.19e-54 189
Msa1008450 AT2G43840.2 28.913 460 277 15 6 437 7 444 1.73e-54 188
Msa1008450 AT3G11340.1 29.386 456 280 12 5 438 8 443 4.86e-54 187
Msa1008450 AT2G43840.1 28.913 460 277 15 6 437 7 444 6.81e-54 186
Msa1008450 AT4G15490.1 28.358 469 285 16 6 436 8 463 2.21e-53 186
Msa1008450 AT2G23260.1 27.434 452 298 9 6 437 10 451 3.95e-53 184
Msa1008450 AT3G46720.1 28.924 446 289 12 6 438 9 439 4.99e-52 181
Msa1008450 AT4G15550.1 26.891 476 287 16 5 436 12 470 5.96e-52 182
Msa1008450 AT4G15500.1 27.991 468 287 16 4 436 7 459 6.68e-52 182
Msa1008450 AT3G46680.1 29.490 451 287 14 6 437 9 447 1.51e-51 180
Msa1008450 AT4G15480.1 29.211 469 282 17 6 436 19 475 3.57e-51 180
Msa1008450 AT2G23250.1 29.372 446 273 15 15 437 7 433 3.67e-51 179
Msa1008450 AT1G05560.1 29.194 459 284 15 5 436 4 448 4.62e-51 179
Msa1008450 AT2G43820.1 29.194 459 277 14 6 437 7 444 8.04e-51 178
Msa1008450 AT1G05560.2 29.194 459 284 15 5 436 54 498 8.98e-51 179
Msa1008450 AT5G38010.1 28.855 454 287 15 6 436 10 450 1.14e-50 178
Msa1008450 AT2G31790.1 27.790 457 295 11 6 437 8 454 2.94e-50 177
Msa1008450 AT3G46690.1 28.035 453 297 12 6 440 9 450 6.82e-50 176
Msa1008450 AT5G05880.1 27.412 456 288 12 8 438 10 447 2.16e-49 174
Msa1008450 AT3G46650.1 28.733 442 280 13 6 435 10 428 2.25e-49 174
Msa1008450 AT5G05900.1 28.817 465 269 15 8 438 10 446 1.50e-48 172
Msa1008450 AT5G38040.1 27.533 454 273 15 14 436 18 446 2.08e-48 172
Msa1008450 AT5G05870.1 29.130 460 277 17 8 436 10 451 5.90e-48 171
Msa1008450 AT5G05860.1 29.039 458 270 16 8 435 11 443 1.03e-47 170
Msa1008450 AT4G14090.1 26.932 453 298 15 5 436 12 452 1.97e-47 169
Msa1008450 AT1G01420.1 28.817 465 292 14 2 434 4 461 4.31e-47 169
Msa1008450 AT3G46700.1 26.846 447 297 11 6 436 9 441 5.41e-47 168
Msa1008450 AT1G01420.2 28.817 465 292 14 2 434 7 464 5.65e-47 169
Msa1008450 AT4G01070.1 28.097 452 270 13 5 417 7 442 8.64e-46 165
Msa1008450 AT2G15490.1 29.293 495 270 18 6 440 7 481 1.46e-45 165
Msa1008450 AT2G15490.3 29.328 491 272 18 6 440 7 478 1.53e-45 165
Msa1008450 AT2G15480.1 28.074 488 282 15 6 440 10 481 3.93e-45 164
Msa1008450 AT2G36800.1 28.719 484 273 20 6 432 12 480 3.13e-44 161
Msa1008450 AT2G36970.1 27.789 475 286 13 5 437 9 468 5.09e-44 160
Msa1008450 AT2G26480.1 27.293 447 282 13 8 431 10 436 6.36e-44 160
Msa1008450 AT1G05530.1 26.898 461 295 15 5 436 4 451 1.12e-43 159
Msa1008450 AT1G22370.1 39.352 216 113 4 187 384 35 250 2.53e-43 154
Msa1008450 AT5G05890.1 27.039 466 285 15 6 438 8 451 2.62e-43 158
Msa1008450 AT2G15480.2 27.510 498 282 16 6 440 10 491 6.12e-43 158
Msa1008450 AT2G36770.1 26.230 488 287 18 6 436 14 485 7.43e-43 157
Msa1008450 AT3G53160.1 27.310 487 283 17 6 436 8 479 1.28e-42 157
Msa1008450 AT2G36750.1 27.801 482 278 18 6 432 10 476 9.48e-42 154
Msa1008450 AT3G16520.3 27.793 367 243 9 91 439 98 460 3.49e-41 152
Msa1008450 AT2G28080.1 27.862 463 282 19 10 436 22 468 4.33e-41 152
Msa1008450 AT2G30140.2 27.586 464 274 16 6 436 13 447 4.67e-41 152
Msa1008450 AT2G30140.1 27.451 459 282 14 6 436 13 448 4.70e-41 152
Msa1008450 AT1G01390.1 27.333 450 276 14 5 417 7 442 4.93e-41 152
Msa1008450 AT2G30150.2 26.452 465 280 16 6 436 13 449 5.08e-41 152
Msa1008450 AT1G01390.2 27.778 450 274 15 5 417 24 459 7.31e-41 152
Msa1008450 AT2G36780.1 24.948 477 299 13 6 432 14 481 2.37e-40 151
Msa1008450 AT4G34138.1 27.607 489 272 19 6 436 11 475 4.34e-40 150
Msa1008450 AT2G30150.1 26.464 461 277 16 10 436 1 433 4.60e-40 149
Msa1008450 AT5G66690.1 28.070 456 264 15 5 417 6 440 5.22e-40 149
Msa1008450 AT2G36760.1 25.203 492 279 15 6 432 14 481 8.93e-40 149
Msa1008450 AT3G16520.2 28.070 342 225 8 91 415 98 435 1.69e-39 147
Msa1008450 AT3G16520.1 28.070 342 225 8 91 415 98 435 1.77e-39 147
Msa1008450 AT3G50740.1 28.601 486 270 19 5 435 6 469 3.87e-39 147
Msa1008450 AT4G34131.1 26.708 483 286 15 6 436 10 476 4.70e-39 147
Msa1008450 AT1G24100.1 26.004 473 280 17 6 436 11 455 9.03e-39 146
Msa1008450 AT5G26310.1 26.625 477 276 16 5 431 6 458 1.26e-38 146
Msa1008450 AT2G36790.1 27.027 481 284 16 6 432 13 480 3.36e-38 145
Msa1008450 AT1G73880.1 27.872 470 280 13 6 436 14 463 6.48e-38 144
Msa1008450 AT5G17050.1 25.000 452 308 13 6 436 12 453 7.85e-37 140
Msa1008450 AT4G34135.1 26.151 478 296 15 6 436 11 478 1.61e-36 140
Msa1008450 AT3G21790.1 22.526 475 321 10 6 436 4 475 5.04e-35 136
Msa1008450 AT2G16890.2 25.696 467 285 13 6 429 9 456 7.89e-35 135
Msa1008450 AT3G21750.1 22.316 475 312 13 6 436 4 465 1.63e-34 134
Msa1008450 AT2G29750.1 25.690 471 302 13 6 436 8 470 1.85e-34 134
Msa1008450 AT2G16890.3 25.977 435 263 12 6 400 9 424 3.27e-34 132
Msa1008450 AT5G49690.1 25.800 469 283 16 6 436 10 451 4.05e-34 133
Msa1008450 AT4G36770.1 28.059 474 265 20 6 430 4 450 1.30e-33 131
Msa1008450 AT3G53150.1 24.880 418 260 11 6 381 22 427 5.30e-33 130
Msa1008450 AT4G15280.1 23.173 479 308 15 6 436 4 470 2.06e-32 128
Msa1008450 AT1G30530.1 24.368 435 308 9 12 435 19 443 2.11e-32 128
Msa1008450 AT5G14860.1 26.947 475 278 16 6 429 8 464 2.42e-32 128
Msa1008450 AT4G15280.2 23.173 479 308 15 6 436 36 502 2.83e-32 129
Msa1008450 AT3G21760.1 24.116 481 308 13 6 436 4 477 3.40e-32 128
Msa1008450 AT1G07250.1 24.842 475 304 14 6 437 6 470 5.95e-32 127
Msa1008450 AT2G18570.1 23.760 484 298 17 5 440 4 464 2.92e-31 125
Msa1008450 AT4G15260.1 23.864 352 227 9 119 436 7 351 5.18e-31 122
Msa1008450 AT2G29740.1 24.319 477 302 13 6 436 8 471 5.33e-31 124
Msa1008450 AT3G21780.1 22.814 469 317 13 6 436 4 465 8.40e-31 124
Msa1008450 AT1G07260.1 23.617 470 313 12 6 436 6 468 1.24e-30 123
Msa1008450 AT3G21800.1 21.503 479 315 13 7 436 6 472 2.00e-30 123
Msa1008450 AT5G17040.1 24.057 424 296 11 6 417 5 414 2.61e-30 122
Msa1008450 AT5G65550.1 24.884 430 286 12 6 408 9 428 2.77e-30 122
Msa1008450 AT5G17040.2 32.821 195 125 3 225 417 122 312 2.87e-30 120
Msa1008450 AT5G17030.1 24.941 425 300 9 6 417 12 430 3.17e-30 122
Msa1008450 AT1G10400.1 25.316 474 292 17 6 437 7 460 1.07e-29 120
Msa1008450 AT2G18560.1 31.330 233 132 8 228 440 150 374 1.30e-29 119
Msa1008450 AT5G54010.1 25.293 427 280 15 1 406 1 409 3.80e-29 119
Msa1008450 AT2G29730.1 23.656 465 311 16 6 436 5 459 4.78e-29 119
Msa1008450 AT5G12890.1 23.800 479 313 13 6 439 10 481 1.10e-28 118
Msa1008450 AT2G29710.1 30.242 248 151 7 208 436 215 459 1.20e-28 117
Msa1008450 AT5G37950.1 27.299 348 230 11 21 353 1 340 2.42e-28 115
Msa1008450 AT5G37950.2 26.437 348 227 10 21 353 1 334 4.00e-28 114
Msa1008450 AT4G27560.1 24.641 418 283 14 6 406 7 409 8.85e-27 112
Msa1008450 AT1G50580.1 26.580 459 290 16 1 436 1 435 3.14e-26 110
Msa1008450 AT4G27570.1 25.120 418 281 14 6 406 7 409 4.51e-26 110
Msa1008450 AT5G53990.1 24.654 434 268 16 1 406 1 403 1.81e-25 108
Msa1008450 AT1G51210.1 25.850 441 272 16 5 417 19 432 3.39e-25 107
Msa1008450 AT2G22930.1 24.700 417 279 12 6 406 6 403 6.43e-25 106
Msa1008450 AT1G64920.1 25.057 435 269 16 1 406 1 407 8.50e-25 106
Msa1008450 AT5G03490.1 29.717 212 142 4 229 436 251 459 1.19e-24 106
Msa1008450 AT1G07240.1 22.152 474 318 16 7 436 6 472 1.60e-24 105
Msa1008450 AT1G64910.1 25.180 417 279 16 1 402 1 399 3.58e-24 104
Msa1008450 AT1G06000.1 29.391 279 169 12 183 437 157 431 2.21e-23 102
Msa1008450 AT3G29630.1 25.696 467 286 17 1 436 1 437 3.14e-23 102
Msa1008450 AT4G01070.2 28.308 325 195 11 5 307 7 315 2.67e-21 95.1
Msa1008450 AT4G09500.2 23.820 445 281 17 6 420 6 422 3.50e-21 95.9
Msa1008450 AT3G29630.2 24.401 459 276 17 1 436 1 411 5.14e-21 95.1
Msa1008450 AT4G09500.1 22.989 435 272 14 6 420 6 397 5.04e-20 92.0
Msa1008450 AT5G54060.1 25.977 435 257 18 8 402 15 424 1.69e-19 90.9
Msa1008450 AT2G22590.1 22.248 436 310 13 6 417 15 445 4.75e-19 89.7
Msa1008450 AT2G23210.1 24.468 282 174 10 6 265 10 274 2.57e-14 73.6

Find 106 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGTTACATTTATTA+TGG 0.129790 7_1:-8852365 Msa1008450:CDS
GAGATACAAACTATAAATTT+TGG 0.179488 7_1:-8850903 Msa1008450:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7_1:+8850667 None:intergenic
TTGGAAGTGGGACACAATTT+AGG 0.247177 7_1:-8852334 Msa1008450:CDS
TTACTTCCATGGAAATCATT+AGG 0.251367 7_1:+8850570 None:intergenic
TCGCCCAACTAATAAACTTT+TGG 0.254931 7_1:+8850196 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7_1:+8850830 None:intergenic
ACAACAACAAAAGTTCATTT+TGG 0.269702 7_1:-8850785 Msa1008450:CDS
GAAAATGACTATTAATAATA+TGG 0.275879 7_1:-8850247 Msa1008450:CDS
GTGTCCATCATAGGTATATC+AGG 0.307459 7_1:+8850981 None:intergenic
TACTTCCATGGAAATCATTA+GGG 0.333367 7_1:+8850571 None:intergenic
TGTTACATTTATTATGGGTT+GGG 0.337526 7_1:-8852359 Msa1008450:CDS
ATATCACTTCTGTCATCTTC+AGG 0.345514 7_1:+8852487 None:intergenic
ATTTATTATGGGTTGGGCTT+TGG 0.345834 7_1:-8852353 Msa1008450:CDS
AAGATATAACTTGCTTAGAT+TGG 0.346657 7_1:-8850758 Msa1008450:CDS
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7_1:+8850673 None:intergenic
AGTGACCTTGCAACCATGTT+TGG 0.359865 7_1:+8852603 None:intergenic
TTAACTTCTTCTATAAGCTT+TGG 0.364725 7_1:+8852418 None:intergenic
ATTGTTGTTACATTTATTAT+GGG 0.367194 7_1:-8852364 Msa1008450:CDS
AAGTTTGTTGTGTCCATCAT+AGG 0.368447 7_1:+8850972 None:intergenic
ATCCCATCTTCAATAAGTTT+AGG 0.371481 7_1:+8852250 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.377369 7_1:-8850814 Msa1008450:CDS
TTGTTACATTTATTATGGGT+TGG 0.377839 7_1:-8852360 Msa1008450:CDS
TATGGGTTGGGCTTTGGAAG+TGG 0.378573 7_1:-8852347 Msa1008450:CDS
TCTCCAAAAGTTTATTAGTT+GGG 0.379670 7_1:-8850199 Msa1008450:CDS
ACCAGCATGTACACCTTCTA+TGG 0.381997 7_1:+8850458 None:intergenic
TATAACTTGCTTAGATTGGT+TGG 0.383830 7_1:-8850754 Msa1008450:CDS
ACATGTCCTTGACCTGGATA+TGG 0.388636 7_1:+8852658 None:intergenic
TTGTTGTTACTTTCCATCAA+TGG 0.392206 7_1:+8850801 None:intergenic
CTTTGGTAGTGTGGTAGTAA+TGG 0.394763 7_1:-8850697 Msa1008450:CDS
TCTATAAGCTTTGGAAGTCT+TGG 0.402505 7_1:+8852427 None:intergenic
GTAAAGGTAAAATTGTTAGT+TGG 0.403350 7_1:-8850551 Msa1008450:CDS
ATCTCCAAAAGTTTATTAGT+TGG 0.404458 7_1:-8850200 Msa1008450:CDS
TAAAGGTAAAATTGTTAGTT+GGG 0.409569 7_1:-8850550 Msa1008450:CDS
AACCATAAACGATCGAAAAC+CGG 0.413554 7_1:-8852562 Msa1008450:CDS
ATACCTAAACTTATTGAAGA+TGG 0.422586 7_1:-8852253 Msa1008450:CDS
TCTGTCATATATGTTTCCTT+TGG 0.423583 7_1:-8850714 Msa1008450:CDS
CTGGTGTACGTTTCTTGTGC+TGG 0.427266 7_1:-8850440 Msa1008450:CDS
ATTTGTGATGTGTGGAAGAC+TGG 0.430215 7_1:-8850381 Msa1008450:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.444015 7_1:-8852290 Msa1008450:CDS
GGTGACACTACCAGATGGTT+TGG 0.448739 7_1:-8852512 Msa1008450:CDS
AGTTGGTGATGATGACATAA+AGG 0.450028 7_1:-8850289 Msa1008450:CDS
CTTTCCATCAATGGACCAAT+TGG 0.450743 7_1:+8850810 None:intergenic
ATAAGCTTTGGAAGTCTTGG+AGG 0.453431 7_1:+8852430 None:intergenic
GGATGGAATTCTACCATAGA+AGG 0.456157 7_1:-8850471 Msa1008450:CDS
AACTTGTGAGAATTGCATAA+GGG 0.457199 7_1:+8852630 None:intergenic
GATCAAAGAAGATCTTATCT+AGG 0.457542 7_1:+8850937 None:intergenic
CTCCCCTGATATACCTATGA+TGG 0.458771 7_1:-8850985 Msa1008450:CDS
GGACCAATTGGTAGGAACTT+TGG 0.458930 7_1:+8850822 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.467404 7_1:-8850825 Msa1008450:CDS
TACCTAAACTTATTGAAGAT+GGG 0.472278 7_1:-8852252 Msa1008450:CDS
TTTCTTGTTATACCATATCC+AGG 0.475958 7_1:-8852670 Msa1008450:CDS
TTTACCTTGTTGTCATTACT+AGG 0.478103 7_1:+8850603 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7_1:-8850567 Msa1008450:CDS
ATGGGTTGGGCTTTGGAAGT+GGG 0.481210 7_1:-8852346 Msa1008450:CDS
TGTCTAGAAGATCAAGTCCT+AGG 0.486727 7_1:+8850649 None:intergenic
CACTTGTATCTTGTCTTGCT+CGG 0.488719 7_1:+8852534 None:intergenic
AAGAAGGTGGATCAAGTAGT+TGG 0.496740 7_1:-8850306 Msa1008450:CDS
GAACTTGTGAGAATTGCATA+AGG 0.502829 7_1:+8852629 None:intergenic
TCTTCAGGTTCCAAACCATC+TGG 0.512078 7_1:+8852502 None:intergenic
ACTATTAATAATATGGAAGA+AGG 0.514243 7_1:-8850240 Msa1008450:CDS
GCCAAAGTAGTGGCAGAAGC+TGG 0.515181 7_1:+8852289 None:intergenic
GGACGAACAACCCAAAGAAA+AGG 0.516602 7_1:+8850624 None:intergenic
CTTTGGAAGTCTTGGAGGCA+TGG 0.521064 7_1:+8852435 None:intergenic
ATATGTTTCCTTTGGTAGTG+TGG 0.521270 7_1:-8850706 Msa1008450:CDS
GGACACAATTTAGGAATCAA+AGG 0.524020 7_1:-8852325 Msa1008450:CDS
GCATACCCTAATGATTTCCA+TGG 0.524493 7_1:-8850576 Msa1008450:CDS
GACACAATTTAGGAATCAAA+GGG 0.528806 7_1:-8852324 Msa1008450:CDS
GAATTAGAGAAAGATGATGA+TGG 0.530243 7_1:-8850354 Msa1008450:CDS
CTTATGAAGCAAGCAACGGC+TGG 0.531258 7_1:+8850501 None:intergenic
GAAACATATATGACAGATTG+AGG 0.532322 7_1:+8850720 None:intergenic
GATGGGATTATTGATTCTGA+AGG 0.541173 7_1:-8852235 Msa1008450:intron
CTTGTCTTGCTCGGAAACAC+CGG 0.544929 7_1:+8852543 None:intergenic
AAGGCAAGAGTTAAGAAAGA+AGG 0.546737 7_1:-8850322 Msa1008450:CDS
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7_1:-8850488 Msa1008450:CDS
TGAAGCAAGCAACGGCTGGA+TGG 0.560282 7_1:+8850505 None:intergenic
TTTGGAGATTATGTGATGAC+TGG 0.561048 7_1:+8850214 None:intergenic
GTCTAGAAGATCAAGTCCTA+GGG 0.562784 7_1:+8850650 None:intergenic
ACCATAGAAGGTGTACATGC+TGG 0.563487 7_1:-8850459 Msa1008450:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7_1:-8850861 Msa1008450:CDS
TGTCCATCATAGGTATATCA+GGG 0.572365 7_1:+8850982 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.574039 7_1:+8850814 None:intergenic
GCAAGAGTTAAGAAAGAAGG+TGG 0.577406 7_1:-8850319 Msa1008450:CDS
TCTTATCTAGGCCGCGCCAT+GGG 0.585959 7_1:+8850949 None:intergenic
AATCATATATTTGTGATGTG+TGG 0.589638 7_1:-8850389 Msa1008450:CDS
CAATTTAATGAACTAGCCCT+AGG 0.592472 7_1:-8850666 Msa1008450:CDS
CATTACTACCACACTACCAA+AGG 0.593338 7_1:+8850698 None:intergenic
GGGTTAACATGTCCTTGACC+TGG 0.597282 7_1:+8852652 None:intergenic
TATGGTATAACAAGAAAATG+TGG 0.598798 7_1:+8852676 None:intergenic
GACAGCACACGCCAAAGTAG+TGG 0.602253 7_1:+8852279 None:intergenic
ACAACAAACTTCCCATGGCG+CGG 0.605733 7_1:-8850960 Msa1008450:CDS
ATTAATAATATGGAAGAAGG+TGG 0.607660 7_1:-8850237 Msa1008450:CDS
GTTATACCATATCCAGGTCA+AGG 0.608398 7_1:-8852664 Msa1008450:CDS
ACTTGTGAGAATTGCATAAG+GGG 0.611094 7_1:+8852631 None:intergenic
TCACAAGTTCTAGCCAAACA+TGG 0.613083 7_1:-8852616 Msa1008450:CDS
TCTAGCCAAACATGGTTGCA+AGG 0.620565 7_1:-8852608 Msa1008450:CDS
GGTGATATGGAAAATACACC+AGG 0.626519 7_1:+8850843 None:intergenic
TGGACACAACAAACTTCCCA+TGG 0.633427 7_1:-8850965 Msa1008450:CDS
CGAGCAAGACAAGATACAAG+TGG 0.649951 7_1:-8852533 Msa1008450:CDS
GCTTGCTTCATAAGTCATTG+TGG 0.650292 7_1:-8850492 Msa1008450:CDS
CTTGTGAGAATTGCATAAGG+GGG 0.662045 7_1:+8852632 None:intergenic
ATGACTTATGAAGCAAGCAA+CGG 0.669823 7_1:+8850497 None:intergenic
TCGTCCTAGTAATGACAACA+AGG 0.682098 7_1:-8850607 Msa1008450:CDS
CAAGTGGTGACACTACCAGA+TGG 0.688058 7_1:-8852517 Msa1008450:CDS
GTCCATCATAGGTATATCAG+GGG 0.691231 7_1:+8850983 None:intergenic
ACACAATTTAGGAATCAAAG+GGG 0.750071 7_1:-8852323 Msa1008450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATTAAATAAAATTGT+AGG - chr7_1:8851371-8851390 Msa1008450:intron 10.0%
!!! TATTGTTGTTACATTTATTA+TGG - chr7_1:8850514-8850533 Msa1008450:CDS 15.0%
!!! ATTGTTGTTACATTTATTAT+GGG - chr7_1:8850515-8850534 Msa1008450:CDS 15.0%
!!! TTTTTTGAAGAAACTAAAAT+GGG + chr7_1:8851081-8851100 None:intergenic 15.0%
!!! TTTTTTTGAAGAAACTAAAA+TGG + chr7_1:8851082-8851101 None:intergenic 15.0%
!!! ATATCAACTTTTCTTATTTA+TGG - chr7_1:8851104-8851123 Msa1008450:intron 15.0%
!! TTAAATAAAATTGTAGGAAT+AGG - chr7_1:8851377-8851396 Msa1008450:intron 15.0%
!! TATATTACTTTAGTGAATTA+TGG + chr7_1:8851653-8851672 None:intergenic 15.0%
!! TAATTCACTAAAGTAATATA+TGG - chr7_1:8851653-8851672 Msa1008450:intron 15.0%
!! GAAAATGACTATTAATAATA+TGG - chr7_1:8852632-8852651 Msa1008450:CDS 15.0%
!!! AGATTTCACAATTAGTATTT+TGG - chr7_1:8850691-8850710 Msa1008450:CDS 20.0%
!!! GATTTCACAATTAGTATTTT+GGG - chr7_1:8850692-8850711 Msa1008450:CDS 20.0%
!! ATTTAATAACTTTCTACTTC+AGG + chr7_1:8851363-8851382 None:intergenic 20.0%
!!! ACAATATCTCTAAAATAGAA+GGG + chr7_1:8851583-8851602 None:intergenic 20.0%
!!! AACAATATCTCTAAAATAGA+AGG + chr7_1:8851584-8851603 None:intergenic 20.0%
!! TTAGAGATATTGTTGTAATT+TGG - chr7_1:8851590-8851609 Msa1008450:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG + chr7_1:8851875-8851894 None:intergenic 20.0%
!!! GAGATACAAACTATAAATTT+TGG - chr7_1:8851976-8851995 Msa1008450:intron 20.0%
!!! AAACTATAAATTTTGGAGAA+TGG - chr7_1:8851983-8852002 Msa1008450:intron 20.0%
!! TAAAGGTAAAATTGTTAGTT+GGG - chr7_1:8852329-8852348 Msa1008450:CDS 20.0%
!!! TGGTTCAATATTTTATTTTG+TGG + chr7_1:8852357-8852376 None:intergenic 20.0%
!! ACTATTAATAATATGGAAGA+AGG - chr7_1:8852639-8852658 Msa1008450:CDS 20.0%
! TATGGTATAACAAGAAAATG+TGG + chr7_1:8850206-8850225 None:intergenic 25.0%
! TTAACTTCTTCTATAAGCTT+TGG + chr7_1:8850464-8850483 None:intergenic 25.0%
! TTGTTACATTTATTATGGGT+TGG - chr7_1:8850519-8850538 Msa1008450:CDS 25.0%
! TGTTACATTTATTATGGGTT+GGG - chr7_1:8850520-8850539 Msa1008450:CDS 25.0%
! ATACCTAAACTTATTGAAGA+TGG - chr7_1:8850626-8850645 Msa1008450:CDS 25.0%
! TACCTAAACTTATTGAAGAT+GGG - chr7_1:8850627-8850646 Msa1008450:CDS 25.0%
!!! GGTAATACTTTTTACTGTTT+TGG - chr7_1:8850665-8850684 Msa1008450:CDS 25.0%
!!! TGAATAAGAAACTAGCTTTA+TGG + chr7_1:8850727-8850746 None:intergenic 25.0%
! TGTCAAATAATTACAAAGGT+AGG + chr7_1:8850986-8851005 None:intergenic 25.0%
! TGTCTGTCAAATAATTACAA+AGG + chr7_1:8850990-8851009 None:intergenic 25.0%
! AAGTCATATGTATGATACTA+CGG + chr7_1:8851617-8851636 None:intergenic 25.0%
! GAAACATATTTCACAAACAA+TGG + chr7_1:8851748-8851767 None:intergenic 25.0%
! TGTAACATAATATCAAGTTC+AGG - chr7_1:8851794-8851813 Msa1008450:intron 25.0%
!!! TGAATTTCTTGTTTTTTGGT+GGG + chr7_1:8851871-8851890 None:intergenic 25.0%
!!! TTGAATTTCTTGTTTTTTGG+TGG + chr7_1:8851872-8851891 None:intergenic 25.0%
!! ACAACAACAAAAGTTCATTT+TGG - chr7_1:8852094-8852113 Msa1008450:intron 25.0%
!!! AAGATATAACTTGCTTAGAT+TGG - chr7_1:8852121-8852140 Msa1008450:intron 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG + chr7_1:8852209-8852228 None:intergenic 25.0%
! GTAAAGGTAAAATTGTTAGT+TGG - chr7_1:8852328-8852347 Msa1008450:CDS 25.0%
! AGAAATTGATCAGTGAAAAA+TGG + chr7_1:8852465-8852484 None:intergenic 25.0%
! AATCATATATTTGTGATGTG+TGG - chr7_1:8852490-8852509 Msa1008450:CDS 25.0%
!!! ATGATGATGGTTTTATATCA+AGG - chr7_1:8852538-8852557 Msa1008450:CDS 25.0%
! ATTAATAATATGGAAGAAGG+TGG - chr7_1:8852642-8852661 Msa1008450:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG - chr7_1:8852679-8852698 Msa1008450:CDS 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG - chr7_1:8852680-8852699 Msa1008450:CDS 25.0%
! TTTCTTGTTATACCATATCC+AGG - chr7_1:8850209-8850228 Msa1008450:CDS 30.0%
AACTTGTGAGAATTGCATAA+GGG + chr7_1:8850252-8850271 None:intergenic 30.0%
GACACAATTTAGGAATCAAA+GGG - chr7_1:8850555-8850574 Msa1008450:CDS 30.0%
ACACAATTTAGGAATCAAAG+GGG - chr7_1:8850556-8850575 Msa1008450:CDS 30.0%
ATCCCATCTTCAATAAGTTT+AGG + chr7_1:8850632-8850651 None:intergenic 30.0%
!! TTTTTCTGTCATCTCTAGAA+TGG + chr7_1:8850856-8850875 None:intergenic 30.0%
! AATAATGCCTCTTTTGTGTA+CGG - chr7_1:8850909-8850928 Msa1008450:CDS 30.0%
GTAGTATCATACATATGACT+TGG - chr7_1:8851616-8851635 Msa1008450:intron 30.0%
GATCATTTGTTTATGCAACA+CGG + chr7_1:8851720-8851739 None:intergenic 30.0%
GATCAAAGAAGATCTTATCT+AGG + chr7_1:8851945-8851964 None:intergenic 30.0%
!! CTATAAATTTTGGAGAATGG+TGG - chr7_1:8851986-8852005 Msa1008450:intron 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG + chr7_1:8852081-8852100 None:intergenic 30.0%
!! TATAACTTGCTTAGATTGGT+TGG - chr7_1:8852125-8852144 Msa1008450:intron 30.0%
GAAACATATATGACAGATTG+AGG + chr7_1:8852162-8852181 None:intergenic 30.0%
TCTGTCATATATGTTTCCTT+TGG - chr7_1:8852165-8852184 Msa1008450:intron 30.0%
! TTTACCTTGTTGTCATTACT+AGG + chr7_1:8852279-8852298 None:intergenic 30.0%
TACTTCCATGGAAATCATTA+GGG + chr7_1:8852311-8852330 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+AGG + chr7_1:8852312-8852331 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG - chr7_1:8852312-8852331 Msa1008450:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG + chr7_1:8852323-8852342 None:intergenic 30.0%
GAATTAGAGAAAGATGATGA+TGG - chr7_1:8852525-8852544 Msa1008450:CDS 30.0%
ACTTGTGAGAATTGCATAAG+GGG + chr7_1:8850251-8850270 None:intergenic 35.0%
GAACTTGTGAGAATTGCATA+AGG + chr7_1:8850253-8850272 None:intergenic 35.0%
!!! AAGGTCACTTTTCTACATAC+TGG - chr7_1:8850290-8850309 Msa1008450:CDS 35.0%
!!! AGGTCACTTTTCTACATACT+GGG - chr7_1:8850291-8850310 Msa1008450:CDS 35.0%
AACCATAAACGATCGAAAAC+CGG - chr7_1:8850317-8850336 Msa1008450:CDS 35.0%
ATATCACTTCTGTCATCTTC+AGG + chr7_1:8850395-8850414 None:intergenic 35.0%
!! TCTATAAGCTTTGGAAGTCT+TGG + chr7_1:8850455-8850474 None:intergenic 35.0%
!! ATTTATTATGGGTTGGGCTT+TGG - chr7_1:8850526-8850545 Msa1008450:CDS 35.0%
GGACACAATTTAGGAATCAA+AGG - chr7_1:8850554-8850573 Msa1008450:CDS 35.0%
!! GATGGGATTATTGATTCTGA+AGG - chr7_1:8850644-8850663 Msa1008450:CDS 35.0%
AAGTTAAGTTCCACGCTTAT+TGG - chr7_1:8850874-8850893 Msa1008450:CDS 35.0%
CGATACCCAAACAAAACAAA+GGG + chr7_1:8850956-8850975 None:intergenic 35.0%
!!! CCTTTGTTTTGTTTGGGTAT+CGG - chr7_1:8850954-8850973 Msa1008450:CDS 35.0%
AACTTTCTACTTCAGGATTG+TGG + chr7_1:8851356-8851375 None:intergenic 35.0%
ATAGACACATAAGAGAGGAA+GGG - chr7_1:8851519-8851538 Msa1008450:intron 35.0%
TGTCCATCATAGGTATATCA+GGG + chr7_1:8851900-8851919 None:intergenic 35.0%
!! AAGTTTGTTGTGTCCATCAT+AGG + chr7_1:8851910-8851929 None:intergenic 35.0%
!! ATATGTTTCCTTTGGTAGTG+TGG - chr7_1:8852173-8852192 Msa1008450:intron 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG + chr7_1:8852215-8852234 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG - chr7_1:8852213-8852232 Msa1008450:intron 35.0%
! TTCTAGACAAGCCTTTTCTT+TGG - chr7_1:8852244-8852263 Msa1008450:CDS 35.0%
! TCTAGACAAGCCTTTTCTTT+GGG - chr7_1:8852245-8852264 Msa1008450:CDS 35.0%
ATGACTTATGAAGCAAGCAA+CGG + chr7_1:8852385-8852404 None:intergenic 35.0%
AAGGCAAGAGTTAAGAAAGA+AGG - chr7_1:8852557-8852576 Msa1008450:CDS 35.0%
!! AGTTGGTGATGATGACATAA+AGG - chr7_1:8852590-8852609 Msa1008450:CDS 35.0%
TTTGGAGATTATGTGATGAC+TGG + chr7_1:8852668-8852687 None:intergenic 35.0%
! TCGCCCAACTAATAAACTTT+TGG + chr7_1:8852686-8852705 None:intergenic 35.0%
GTTATACCATATCCAGGTCA+AGG - chr7_1:8850215-8850234 Msa1008450:CDS 40.0%
CTTGTGAGAATTGCATAAGG+GGG + chr7_1:8850250-8850269 None:intergenic 40.0%
! TCACAAGTTCTAGCCAAACA+TGG - chr7_1:8850263-8850282 Msa1008450:CDS 40.0%
CACTTGTATCTTGTCTTGCT+CGG + chr7_1:8850348-8850367 None:intergenic 40.0%
!! ATAAGCTTTGGAAGTCTTGG+AGG + chr7_1:8850452-8850471 None:intergenic 40.0%
TTGGAAGTGGGACACAATTT+AGG - chr7_1:8850545-8850564 Msa1008450:CDS 40.0%
GATCATTTCTTCAGCTTCTG+TGG - chr7_1:8850766-8850785 Msa1008450:CDS 40.0%
! TTTTGTGTGTGTGGCTCATT+TGG - chr7_1:8850790-8850809 Msa1008450:CDS 40.0%
TTAAGTTCCACGCTTATTGG+TGG - chr7_1:8850877-8850896 Msa1008450:CDS 40.0%
!!! TCGGACCCTTTGTTTTGTTT+GGG - chr7_1:8850948-8850967 Msa1008450:CDS 40.0%
CCGATACCCAAACAAAACAA+AGG + chr7_1:8850957-8850976 None:intergenic 40.0%
GACTCATAGACACATAAGAG+AGG - chr7_1:8851514-8851533 Msa1008450:intron 40.0%
CATAGACACATAAGAGAGGA+AGG - chr7_1:8851518-8851537 Msa1008450:intron 40.0%
TAGACACATAAGAGAGGAAG+GGG - chr7_1:8851520-8851539 Msa1008450:intron 40.0%
GTCCATCATAGGTATATCAG+GGG + chr7_1:8851899-8851918 None:intergenic 40.0%
GTGTCCATCATAGGTATATC+AGG + chr7_1:8851901-8851920 None:intergenic 40.0%
GGTGATATGGAAAATACACC+AGG + chr7_1:8852039-8852058 None:intergenic 40.0%
! TGGTAGGAACTTTGGTGATA+TGG + chr7_1:8852052-8852071 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG - chr7_1:8852054-8852073 Msa1008450:intron 40.0%
CTTTCCATCAATGGACCAAT+TGG + chr7_1:8852072-8852091 None:intergenic 40.0%
CATTACTACCACACTACCAA+AGG + chr7_1:8852184-8852203 None:intergenic 40.0%
!! CTTTGGTAGTGTGGTAGTAA+TGG - chr7_1:8852182-8852201 Msa1008450:intron 40.0%
GTCTAGAAGATCAAGTCCTA+GGG + chr7_1:8852232-8852251 None:intergenic 40.0%
TGTCTAGAAGATCAAGTCCT+AGG + chr7_1:8852233-8852252 None:intergenic 40.0%
TCGTCCTAGTAATGACAACA+AGG - chr7_1:8852272-8852291 Msa1008450:CDS 40.0%
GCATACCCTAATGATTTCCA+TGG - chr7_1:8852303-8852322 Msa1008450:CDS 40.0%
GCTTGCTTCATAAGTCATTG+TGG - chr7_1:8852387-8852406 Msa1008450:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG - chr7_1:8852391-8852410 Msa1008450:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG - chr7_1:8852408-8852427 Msa1008450:CDS 40.0%
ATTTGTGATGTGTGGAAGAC+TGG - chr7_1:8852498-8852517 Msa1008450:CDS 40.0%
GCAAGAGTTAAGAAAGAAGG+TGG - chr7_1:8852560-8852579 Msa1008450:CDS 40.0%
AAGAAGGTGGATCAAGTAGT+TGG - chr7_1:8852573-8852592 Msa1008450:CDS 40.0%
ACATGTCCTTGACCTGGATA+TGG + chr7_1:8850224-8850243 None:intergenic 45.0%
TCTAGCCAAACATGGTTGCA+AGG - chr7_1:8850271-8850290 Msa1008450:CDS 45.0%
AGTGACCTTGCAACCATGTT+TGG + chr7_1:8850279-8850298 None:intergenic 45.0%
!!! CACCGGTTTTCGATCGTTTA+TGG + chr7_1:8850322-8850341 None:intergenic 45.0%
CGAGCAAGACAAGATACAAG+TGG - chr7_1:8850346-8850365 Msa1008450:CDS 45.0%
! TCTTCAGGTTCCAAACCATC+TGG + chr7_1:8850380-8850399 None:intergenic 45.0%
! TTCTGTGGCTTTTGTGTGTG+TGG - chr7_1:8850781-8850800 Msa1008450:CDS 45.0%
CCTTTAACCACCAATAAGCG+TGG + chr7_1:8850887-8850906 None:intergenic 45.0%
! CCACGCTTATTGGTGGTTAA+AGG - chr7_1:8850884-8850903 Msa1008450:CDS 45.0%
CTCACAACCGTACACAAAAG+AGG + chr7_1:8850919-8850938 None:intergenic 45.0%
!!! GTCGGACCCTTTGTTTTGTT+TGG - chr7_1:8850947-8850966 Msa1008450:CDS 45.0%
AGCACAAGGTGTGCTAAAGA+AGG + chr7_1:8851028-8851047 None:intergenic 45.0%
TAGCACACCTTGTGCTTAAG+AGG - chr7_1:8851032-8851051 Msa1008450:intron 45.0%
CCACTGCGACTAAAGAGTAA+CGG + chr7_1:8851684-8851703 None:intergenic 45.0%
TACTCTTTAGTCGCAGTGGT+AGG - chr7_1:8851685-8851704 Msa1008450:intron 45.0%
! TGATGTCCTTTTCGCATTGC+AGG - chr7_1:8851841-8851860 Msa1008450:intron 45.0%
GGATTTCCTGCAATGCGAAA+AGG + chr7_1:8851850-8851869 None:intergenic 45.0%
CTCCCCTGATATACCTATGA+TGG - chr7_1:8851894-8851913 Msa1008450:intron 45.0%
TGGACACAACAAACTTCCCA+TGG - chr7_1:8851914-8851933 Msa1008450:intron 45.0%
ACTGCTTATGATCTTGAGCC+TGG - chr7_1:8852018-8852037 Msa1008450:intron 45.0%
GGACCAATTGGTAGGAACTT+TGG + chr7_1:8852060-8852079 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG + chr7_1:8852068-8852087 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG - chr7_1:8852065-8852084 Msa1008450:intron 45.0%
GGACGAACAACCCAAAGAAA+AGG + chr7_1:8852258-8852277 None:intergenic 45.0%
! ACCATAGAAGGTGTACATGC+TGG - chr7_1:8852420-8852439 Msa1008450:CDS 45.0%
ACCAGCATGTACACCTTCTA+TGG + chr7_1:8852424-8852443 None:intergenic 45.0%
GGGTTAACATGTCCTTGACC+TGG + chr7_1:8850230-8850249 None:intergenic 50.0%
CTTGTCTTGCTCGGAAACAC+CGG + chr7_1:8850339-8850358 None:intergenic 50.0%
CAAGTGGTGACACTACCAGA+TGG - chr7_1:8850362-8850381 Msa1008450:CDS 50.0%
GGTGACACTACCAGATGGTT+TGG - chr7_1:8850367-8850386 Msa1008450:CDS 50.0%
! CTTTGGAAGTCTTGGAGGCA+TGG + chr7_1:8850447-8850466 None:intergenic 50.0%
!! TATGGGTTGGGCTTTGGAAG+TGG - chr7_1:8850532-8850551 Msa1008450:CDS 50.0%
!! ATGGGTTGGGCTTTGGAAGT+GGG - chr7_1:8850533-8850552 Msa1008450:CDS 50.0%
TCCAGCTTCTGCCACTACTT+TGG - chr7_1:8850589-8850608 Msa1008450:CDS 50.0%
TTGTGTACGGTTGTGAGCAG+TGG - chr7_1:8850922-8850941 Msa1008450:CDS 50.0%
AGAGACGCCTCTTAAGCACA+AGG + chr7_1:8851042-8851061 None:intergenic 50.0%
TGGGAGGTGATCATCTAGCA+TGG - chr7_1:8851545-8851564 Msa1008450:intron 50.0%
CCGTTACTCTTTAGTCGCAG+TGG - chr7_1:8851681-8851700 Msa1008450:intron 50.0%
GTCGCAGTGGTAGGTACATT+TGG - chr7_1:8851694-8851713 Msa1008450:intron 50.0%
ACAACAAACTTCCCATGGCG+CGG - chr7_1:8851919-8851938 Msa1008450:intron 50.0%
CTTATGAAGCAAGCAACGGC+TGG + chr7_1:8852381-8852400 None:intergenic 50.0%
CTGGTGTACGTTTCTTGTGC+TGG - chr7_1:8852439-8852458 Msa1008450:CDS 50.0%
GCCAAAGTAGTGGCAGAAGC+TGG + chr7_1:8850593-8850612 None:intergenic 55.0%
GACAGCACACGCCAAAGTAG+TGG + chr7_1:8850603-8850622 None:intergenic 55.0%
TGTACGGTTGTGAGCAGTGG+CGG - chr7_1:8850925-8850944 Msa1008450:CDS 55.0%
ACATAAGAGAGGAAGGGGCG+TGG - chr7_1:8851525-8851544 Msa1008450:intron 55.0%
! CATAAGAGAGGAAGGGGCGT+GGG - chr7_1:8851526-8851545 Msa1008450:intron 55.0%
TCTTATCTAGGCCGCGCCAT+GGG + chr7_1:8851933-8851952 None:intergenic 55.0%
ATCTTATCTAGGCCGCGCCA+TGG + chr7_1:8851934-8851953 None:intergenic 55.0%
TGAAGCAAGCAACGGCTGGA+TGG + chr7_1:8852377-8852396 None:intergenic 55.0%
CGGTTGTGAGCAGTGGCGGT+CGG - chr7_1:8850929-8850948 Msa1008450:CDS 65.0%
! AAGAGAGGAAGGGGCGTGGG+AGG - chr7_1:8851529-8851548 Msa1008450:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 8850191 8852710 8850191 ID=Msa1008450;Name=Msa1008450
chr7_1 mRNA 8850191 8852710 8850191 ID=Msa1008450-mRNA-1;Parent=Msa1008450;Name=Msa1008450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0|1|1|1|2|0|440
chr7_1 exon 8852236 8852710 8852236 ID=Msa1008450-mRNA-1:exon:2561;Parent=Msa1008450-mRNA-1
chr7_1 exon 8850191 8851038 8850191 ID=Msa1008450-mRNA-1:exon:2560;Parent=Msa1008450-mRNA-1
chr7_1 CDS 8852236 8852710 8852236 ID=Msa1008450-mRNA-1:cds;Parent=Msa1008450-mRNA-1
chr7_1 CDS 8850191 8851038 8850191 ID=Msa1008450-mRNA-1:cds;Parent=Msa1008450-mRNA-1
Gene Sequence

>Msa1008450

ATGGGTGTATTGCCACATTTTCTTGTTATACCATATCCAGGTCAAGGACATGTTAACCCCCTTATGCAATTCTCACAAGTTCTAGCCAAACATGGTTGCAAGGTCACTTTTCTACATACTGGGTTTAACCATAAACGATCGAAAACCGGTGTTTCCGAGCAAGACAAGATACAAGTGGTGACACTACCAGATGGTTTGGAACCTGAAGATGACAGAAGTGATATGAAGAAAGTTCTATTATCAATTAAAAGCACCATGCCTCCAAGACTTCCAAAGCTTATAGAAGAAGTTAATGCTTTGAATGTTGACAACAAGATCAATTGTATTGTTGTTACATTTATTATGGGTTGGGCTTTGGAAGTGGGACACAATTTAGGAATCAAAGGGGCTCTACTTTGTCCAGCTTCTGCCACTACTTTGGCGTGTGCTGTCTTCATACCTAAACTTATTGAAGATGGGATTATTGATTCTGAAGGAAATCCCACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATGGACACAACAAACTTCCCATGGCGCGGCCTAGATAAGATCTTCTTTGATCATTTTGTGCAAGAGATACAAACTATAAATTTTGGAGAATGGTGGCTTTGCAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATATCACCAAAGTTCCTACCAATTGGTCCATTGATGGAAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGATATAACTTGCTTAGATTGGTTGGATAAGCAAGCACCTCAATCTGTCATATATGTTTCCTTTGGTAGTGTGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGATCTTCTAGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAACAAGGTAAACTATGCATACCCTAATGATTTCCATGGAAGTAAAGGTAAAATTGTTAGTTGGGCACCACAAAATAAAATATTGAACCATCCAGCCGTTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGCTGGTGTACGTTTCTTGTGCTGGCCATTTTTCACTGATCAATTTCTCAATAAATCATATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATGATGGTTTTATATCAAGGCAAGAGTTAAGAAAGAAGGTGGATCAAGTAGTTGGTGATGATGACATAAAGGCAATGTGTTTGAAAATGAAGAAAATGACTATTAATAATATGGAAGAAGGTGGCCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGGGCGAATTAA
Protein sequence

>Msa1008450

MGVLPHFLVIPYPGQGHVNPLMQFSQVLAKHGCKVTFLHTGFNHKRSKTGVSEQDKIQVVTLPDGLEPEDDRSDMKKVLLSIKSTMPPRLPKLIEEVNALNVDNKINCIVVTFIMGWALEVGHNLGIKGALLCPASATTLACAVFIPKLIEDGIIDSEGNPTKKQEIQISPDIPMMDTTNFPWRGLDKIFFDHFVQEIQTINFGEWWLCNTAYDLEPGVFSISPKFLPIGPLMESNNNKSSFWQEDITCLDWLDKQAPQSVIYVSFGSVVVMDQNQFNELALGLDLLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVSWAPQNKILNHPAVACFISHCGWNSTIEGVHAGVRFLCWPFFTDQFLNKSYICDVWKTGLELEKDDDGFISRQELRKKVDQVVGDDDIKAMCLKMKKMTINNMEEGGQSSHNLQKFISWAN*