AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0741400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0741400 MtrunA17_Chr5g0442771 94.212 311 17 1 1 310 1 311 0.0 617
Msa0741400 MtrunA17_Chr2g0311651 53.618 304 127 10 6 299 9 308 6.39e-97 288
Msa0741400 MtrunA17_Chr2g0311661 52.349 298 119 7 6 299 9 287 1.92e-94 281
Msa0741400 MtrunA17_Chr5g0417001 66.279 172 56 2 10 181 6 175 1.04e-77 242
Msa0741400 MtrunA17_Chr8g0361731 64.072 167 59 1 12 178 8 173 2.01e-76 239
Msa0741400 MtrunA17_Chr6g0453131 60.694 173 65 2 9 181 7 176 1.05e-71 226
Msa0741400 MtrunA17_Chr4g0076731 53.939 165 63 3 14 178 50 201 4.19e-55 184
Msa0741400 MtrunA17_Chr2g0318101 47.753 178 86 4 20 193 17 191 7.83e-53 176
Msa0741400 MtrunA17_Chr4g0047841 48.000 175 72 3 20 178 17 188 4.53e-52 174
Msa0741400 MtrunA17_Chr3g0124761 53.459 159 64 3 20 178 9 157 7.41e-52 172
Msa0741400 MtrunA17_Chr7g0252971 49.091 165 73 2 20 178 10 169 8.54e-52 173
Msa0741400 MtrunA17_Chr8g0384721 50.000 166 74 2 20 185 9 165 3.96e-51 170
Msa0741400 MtrunA17_Chr7g0263931 38.182 275 143 10 9 282 1 249 1.51e-50 170
Msa0741400 MtrunA17_Chr2g0326361 49.143 175 83 3 20 194 16 184 6.19e-50 168
Msa0741400 MtrunA17_Chr2g0318081 48.864 176 78 2 20 195 18 181 1.44e-49 168
Msa0741400 MtrunA17_Chr5g0417791 50.314 159 71 2 20 178 5 155 1.97e-49 165
Msa0741400 MtrunA17_Chr4g0042561 50.314 159 71 2 20 178 11 161 1.60e-48 163
Msa0741400 MtrunA17_Chr7g0214071 53.293 167 62 5 11 176 7 158 4.72e-48 161
Msa0741400 MtrunA17_Chr3g0130731 47.429 175 78 4 20 190 9 173 6.32e-48 162
Msa0741400 MtrunA17_Chr8g0359921 49.405 168 75 2 20 187 16 173 4.51e-47 161
Msa0741400 MtrunA17_Chr4g0018391 43.333 180 80 4 18 194 7 167 6.73e-47 161
Msa0741400 MtrunA17_Chr3g0091921 45.604 182 86 4 6 184 1 172 2.34e-46 158
Msa0741400 MtrunA17_Chr4g0038751 42.708 192 95 4 3 194 1 177 2.56e-46 158
Msa0741400 MtrunA17_Chr8g0372121 36.879 282 145 10 18 294 6 259 2.93e-46 158
Msa0741400 MtrunA17_Chr2g0316971 47.561 164 78 3 15 178 20 175 4.79e-46 159
Msa0741400 MtrunA17_Chr6g0453451 46.927 179 84 4 1 178 2 170 1.12e-45 157
Msa0741400 MtrunA17_Chr5g0398971 46.061 165 72 4 18 178 7 158 1.51e-45 157
Msa0741400 MtrunA17_Chr4g0060931 44.828 174 84 3 13 184 10 173 1.57e-45 157
Msa0741400 MtrunA17_Chr4g0056541 45.122 164 73 3 18 178 7 156 2.57e-45 157
Msa0741400 MtrunA17_Chr7g0253011 47.647 170 79 3 12 178 9 171 5.09e-45 157
Msa0741400 MtrunA17_Chr5g0405211 40.404 198 95 4 15 203 5 188 1.13e-44 155
Msa0741400 MtrunA17_Chr3g0109821 50.311 161 67 5 20 178 8 157 5.12e-44 159
Msa0741400 MtrunA17_Chr6g0481091 45.963 161 73 3 20 178 8 156 6.44e-44 150
Msa0741400 MtrunA17_Chr3g0139331 41.304 184 96 2 14 197 7 178 1.71e-43 152
Msa0741400 MtrunA17_Chr4g0017921 43.902 164 74 3 18 178 8 156 5.25e-43 151
Msa0741400 MtrunA17_Chr6g0461661 48.214 168 77 5 11 176 9 168 8.08e-43 151
Msa0741400 MtrunA17_Chr8g0346001 43.293 164 87 2 18 178 15 175 1.10e-42 152
Msa0741400 MtrunA17_Chr2g0309331 38.710 217 107 6 17 230 9 202 1.88e-42 149
Msa0741400 MtrunA17_Chr2g0309891 45.963 161 74 3 20 178 8 157 1.96e-42 149
Msa0741400 MtrunA17_Chr1g0147421 40.571 175 91 3 12 185 21 183 8.95e-42 148
Msa0741400 MtrunA17_Chr6g0484441 41.765 170 85 3 15 184 2 157 2.08e-41 146
Msa0741400 MtrunA17_Chr5g0433781 46.584 161 72 4 20 178 8 156 2.21e-41 151
Msa0741400 MtrunA17_Chr1g0200561 43.353 173 80 5 15 183 16 174 2.22e-41 147
Msa0741400 MtrunA17_Chr5g0400461 43.636 165 75 3 20 178 8 160 6.75e-41 145
Msa0741400 MtrunA17_Chr3g0131911 46.154 169 85 3 11 178 7 170 8.93e-41 142
Msa0741400 MtrunA17_Chr4g0054791 49.630 135 66 1 14 146 2 136 1.40e-40 144
Msa0741400 MtrunA17_Chr8g0385991 45.506 178 80 6 20 190 16 183 1.45e-40 141
Msa0741400 MtrunA17_Chr1g0197351 42.328 189 97 4 18 200 42 224 2.18e-40 147
Msa0741400 MtrunA17_Chr2g0312321 39.623 212 94 6 20 226 13 195 1.34e-39 140
Msa0741400 MtrunA17_Chr7g0217721 42.286 175 90 4 12 178 11 182 1.81e-39 141
Msa0741400 MtrunA17_Chr1g0183741 35.950 242 112 8 20 255 12 216 1.96e-39 139
Msa0741400 MtrunA17_Chr3g0144271 49.265 136 67 2 12 146 17 151 2.28e-39 143
Msa0741400 MtrunA17_Chr5g0428991 47.239 163 71 4 19 178 25 175 2.54e-38 143
Msa0741400 MtrunA17_Chr1g0201021 45.062 162 75 4 19 178 20 169 8.69e-38 141
Msa0741400 MtrunA17_Chr3g0130101 40.120 167 86 3 14 178 3 157 1.80e-37 136
Msa0741400 MtrunA17_Chr3g0128151 45.625 160 73 3 21 178 25 172 2.18e-37 140
Msa0741400 MtrunA17_Chr7g0217711 45.390 141 74 1 21 161 22 159 2.47e-37 131
Msa0741400 MtrunA17_Chr8g0364791 42.331 163 80 4 18 178 6 156 4.05e-37 137
Msa0741400 MtrunA17_Chr7g0261411 41.975 162 70 3 20 176 12 154 8.72e-37 133
Msa0741400 MtrunA17_Chr1g0197361 43.827 162 75 5 20 178 10 158 1.33e-36 138
Msa0741400 MtrunA17_Chr8g0384201 41.104 163 82 4 18 178 6 156 2.13e-36 136
Msa0741400 MtrunA17_Chr3g0128111 35.088 228 120 7 21 246 45 246 1.88e-35 128
Msa0741400 MtrunA17_Chr3g0092671 42.683 164 74 5 20 178 7 155 6.64e-35 132
Msa0741400 MtrunA17_Chr8g0345671 46.457 127 63 4 21 144 14 138 1.93e-29 115
Msa0741400 MtrunA17_Chr2g0321631 38.323 167 81 6 20 176 6 160 3.73e-28 109
Msa0741400 MtrunA17_Chr4g0026141 39.106 179 90 7 15 185 2 169 4.28e-28 109
Msa0741400 MtrunA17_Chr8g0345691 46.457 127 63 4 21 144 15 139 9.36e-27 108
Msa0741400 MtrunA17_Chr8g0345711 43.307 127 67 4 21 144 15 139 2.36e-26 102
Msa0741400 MtrunA17_Chr7g0266701 34.884 172 100 6 20 185 6 171 3.79e-25 101
Msa0741400 MtrunA17_Chr4g0050701 31.447 159 97 3 20 178 13 159 1.05e-24 98.6
Msa0741400 MtrunA17_Chr3g0113001 42.241 116 58 2 63 178 10 116 3.86e-24 99.8
Msa0741400 MtrunA17_Chr8g0345731 39.394 132 73 5 19 144 24 154 7.53e-22 90.5
Msa0741400 MtrunA17_Chr2g0321741 40.741 108 60 2 38 144 12 116 1.39e-21 93.6
Msa0741400 MtrunA17_Chr8g0345721 36.538 156 65 5 21 144 38 191 6.79e-21 89.0
Msa0741400 MtrunA17_Chr7g0243371 47.253 91 44 2 71 161 17 103 2.02e-20 85.1
Msa0741400 MtrunA17_Chr7g0251651 27.962 211 124 6 10 217 9 194 2.36e-20 87.0
Msa0741400 MtrunA17_Chr8g0345741 38.333 120 69 4 29 145 2 119 1.84e-19 83.6
Msa0741400 MtrunA17_Chr8g0384351 32.704 159 75 6 20 178 12 138 3.27e-19 83.6
Msa0741400 MtrunA17_Chr8g0345701 37.838 148 71 7 21 151 10 153 9.79e-18 79.3
Msa0741400 MtrunA17_Chr7g0251661 31.788 151 92 6 16 160 7 152 4.34e-17 77.0
Msa0741400 MtrunA17_Chr7g0251671 33.333 126 77 4 21 144 13 133 7.08e-17 76.6
Msa0741400 MtrunA17_Chr3g0113031 41.000 100 51 3 79 178 1 92 2.36e-16 77.4
Msa0741400 MtrunA17_Chr3g0130321 27.500 160 106 4 20 177 9 160 9.95e-15 71.6
Msa0741400 MtrunA17_Chr1g0194791 61.702 47 17 1 20 65 48 94 8.21e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0741400 AT2G43000.1 51.890 291 115 6 10 300 10 275 1.04e-95 284
Msa0741400 AT3G12910.1 50.166 301 120 11 14 301 17 300 2.55e-81 248
Msa0741400 AT5G39820.1 60.773 181 58 2 10 178 12 191 1.77e-75 235
Msa0741400 AT1G26870.1 64.072 167 59 1 12 178 10 175 1.21e-71 228
Msa0741400 AT2G02450.2 48.969 194 84 5 17 210 50 228 1.79e-56 188
Msa0741400 AT2G02450.1 48.969 194 84 5 17 210 50 228 1.88e-56 187
Msa0741400 AT5G63790.1 46.667 195 95 4 12 205 43 229 3.04e-53 177
Msa0741400 AT5G63790.2 46.667 195 95 4 12 205 53 239 3.52e-53 177
Msa0741400 AT5G08790.1 45.146 206 99 5 16 215 4 201 9.27e-53 174
Msa0741400 AT3G04070.2 52.174 161 73 2 20 178 12 170 1.73e-52 176
Msa0741400 AT2G43000.2 45.045 222 97 6 79 300 1 197 2.86e-52 171
Msa0741400 AT1G61110.1 51.497 167 76 4 20 183 18 182 2.01e-51 172
Msa0741400 AT3G04070.1 49.714 175 72 4 20 178 12 186 2.27e-51 173
Msa0741400 AT1G69490.1 50.314 159 71 2 20 178 11 161 5.77e-51 169
Msa0741400 AT3G15510.1 48.428 159 79 2 22 178 21 178 1.38e-49 169
Msa0741400 AT1G01720.1 50.943 159 69 2 20 178 9 158 3.92e-49 166
Msa0741400 AT2G24430.2 34.021 291 170 5 7 295 5 275 8.94e-49 165
Msa0741400 AT2G24430.1 34.021 291 170 5 7 295 5 275 8.94e-49 165
Msa0741400 AT4G27410.2 50.311 161 64 3 20 178 16 162 5.47e-48 162
Msa0741400 AT1G52890.1 49.697 165 71 2 20 184 16 168 9.98e-48 162
Msa0741400 AT3G15500.1 49.112 169 74 2 20 188 16 172 1.36e-47 162
Msa0741400 AT1G77450.1 38.462 247 137 5 20 266 12 243 1.40e-47 160
Msa0741400 AT1G12260.2 46.784 171 73 4 18 184 7 163 2.15e-47 162
Msa0741400 AT1G12260.1 46.784 171 73 4 18 184 7 163 2.85e-47 164
Msa0741400 AT5G61430.1 46.552 174 82 3 12 184 9 172 4.83e-47 161
Msa0741400 AT2G17040.1 39.367 221 120 3 16 236 4 210 1.38e-46 158
Msa0741400 AT5G07680.1 44.809 183 87 4 6 184 1 173 9.06e-46 158
Msa0741400 AT5G07680.2 46.667 165 78 2 20 184 5 159 1.86e-45 157
Msa0741400 AT1G62700.1 47.561 164 69 4 18 178 7 156 3.66e-45 158
Msa0741400 AT1G62700.2 47.561 164 69 4 18 178 7 156 3.66e-45 158
Msa0741400 AT4G10350.1 38.496 226 114 6 18 238 9 214 4.44e-45 156
Msa0741400 AT5G66300.1 43.575 179 80 5 18 188 12 177 5.02e-45 155
Msa0741400 AT4G36160.1 45.181 166 74 3 18 180 10 161 5.21e-45 157
Msa0741400 AT4G36160.3 45.181 166 74 3 18 180 10 161 5.21e-45 157
Msa0741400 AT4G36160.2 45.181 166 74 3 18 180 14 165 5.33e-45 157
Msa0741400 AT5G39610.1 46.154 169 80 3 11 178 12 170 7.14e-45 154
Msa0741400 AT1G71930.2 38.258 264 133 11 20 276 11 251 8.46e-45 155
Msa0741400 AT1G71930.1 38.258 264 133 11 20 276 11 251 8.46e-45 155
Msa0741400 AT1G52880.1 48.734 158 79 2 22 178 21 177 1.21e-44 155
Msa0741400 AT5G13180.1 48.837 172 73 4 6 176 1 158 1.47e-44 152
Msa0741400 AT5G18270.1 49.686 159 71 3 20 178 23 172 3.01e-44 154
Msa0741400 AT4G27410.3 44.330 194 78 4 20 195 16 197 4.07e-44 153
Msa0741400 AT5G62380.2 44.512 164 74 3 18 178 7 156 4.97e-44 154
Msa0741400 AT5G62380.1 44.512 164 74 3 18 178 7 156 4.97e-44 154
Msa0741400 AT3G18400.1 44.706 170 81 3 15 184 2 158 5.04e-44 153
Msa0741400 AT5G18270.2 49.057 159 72 3 20 178 23 172 1.11e-43 152
Msa0741400 AT2G18060.3 43.902 164 75 3 18 178 9 158 1.11e-43 153
Msa0741400 AT2G18060.1 43.902 164 75 3 18 178 9 158 1.11e-43 153
Msa0741400 AT3G04060.1 49.693 163 72 4 20 181 22 175 3.17e-43 151
Msa0741400 AT3G29035.1 53.846 130 57 1 20 149 26 152 8.63e-43 150
Msa0741400 AT4G17980.1 53.488 129 57 2 20 146 8 135 9.14e-43 148
Msa0741400 AT4G17980.2 53.488 129 57 2 20 146 8 135 9.20e-43 149
Msa0741400 AT1G33280.1 45.122 164 72 4 18 178 8 156 2.00e-42 148
Msa0741400 AT3G12977.1 45.283 159 76 3 20 178 20 167 2.47e-42 147
Msa0741400 AT5G53950.1 44.444 171 87 3 8 178 7 169 2.67e-42 150
Msa0741400 AT3G10480.1 42.541 181 87 4 18 192 27 196 4.30e-42 151
Msa0741400 AT1G65910.1 48.447 161 69 4 20 178 8 156 4.40e-42 154
Msa0741400 AT3G17730.1 45.963 161 73 5 20 178 8 156 5.19e-42 145
Msa0741400 AT3G10480.2 42.541 181 86 4 18 192 27 195 5.43e-42 150
Msa0741400 AT3G15170.1 44.068 177 89 5 1 175 1 169 6.87e-42 147
Msa0741400 AT3G03200.1 42.254 213 103 7 20 230 8 202 7.45e-42 151
Msa0741400 AT1G76420.1 44.025 159 78 2 20 178 24 171 1.23e-41 147
Msa0741400 AT5G17260.1 47.531 162 72 5 20 179 8 158 2.26e-41 149
Msa0741400 AT1G79580.3 42.690 171 81 4 18 185 17 173 2.42e-41 147
Msa0741400 AT1G79580.5 42.690 171 81 4 18 185 17 173 2.42e-41 147
Msa0741400 AT1G79580.4 42.690 171 81 4 18 185 17 173 2.42e-41 147
Msa0741400 AT1G79580.2 42.690 171 81 4 18 185 17 173 2.42e-41 147
Msa0741400 AT1G79580.1 42.690 171 81 4 18 185 17 173 2.42e-41 147
Msa0741400 AT3G10490.1 42.541 181 87 5 18 192 27 196 9.90e-41 142
Msa0741400 AT2G33480.2 48.408 157 64 3 20 176 17 156 1.09e-40 143
Msa0741400 AT1G32770.1 37.004 227 107 7 18 233 16 217 1.28e-40 145
Msa0741400 AT1G32510.1 45.455 165 76 4 20 178 8 164 2.62e-40 142
Msa0741400 AT5G46590.2 51.163 129 59 2 20 146 8 134 2.72e-40 142
Msa0741400 AT1G54330.1 45.963 161 70 3 20 178 8 153 2.90e-40 142
Msa0741400 AT5G46590.1 51.163 129 59 2 20 146 8 134 4.69e-40 142
Msa0741400 AT2G33480.1 48.408 157 66 4 20 176 17 158 5.97e-40 141
Msa0741400 AT2G46770.1 41.420 169 87 4 18 178 16 180 1.16e-39 143
Msa0741400 AT3G10490.2 43.094 181 86 6 18 192 27 196 3.05e-39 143
Msa0741400 AT5G04410.1 44.785 163 76 4 18 178 9 159 6.27e-39 144
Msa0741400 AT3G10500.1 43.373 166 80 4 18 181 9 162 1.00e-38 144
Msa0741400 AT1G33060.2 38.117 223 120 6 16 236 22 228 1.13e-38 144
Msa0741400 AT1G33060.1 38.117 223 120 6 16 236 22 228 1.16e-38 144
Msa0741400 AT1G56010.2 45.625 160 77 5 20 178 21 171 1.24e-38 139
Msa0741400 AT5G09330.5 42.331 163 80 4 18 178 6 156 2.13e-38 142
Msa0741400 AT5G09330.2 42.331 163 80 4 18 178 6 156 2.13e-38 142
Msa0741400 AT5G09330.4 42.331 163 80 4 18 178 6 156 2.13e-38 142
Msa0741400 AT5G09330.3 42.331 163 80 4 18 178 6 156 2.13e-38 142
Msa0741400 AT5G09330.1 42.331 163 80 4 18 178 6 156 2.13e-38 142
Msa0741400 AT3G61910.1 35.321 218 116 6 8 206 2 213 4.64e-38 138
Msa0741400 AT4G35580.1 44.503 191 84 8 19 205 9 181 5.72e-38 141
Msa0741400 AT4G35580.3 44.503 191 84 8 19 205 9 181 6.53e-38 141
Msa0741400 AT4G35580.2 44.503 191 84 8 19 205 9 181 6.61e-38 141
Msa0741400 AT1G34190.1 49.612 129 60 2 20 146 18 143 6.81e-38 141
Msa0741400 AT1G34180.3 49.612 129 60 2 20 146 18 143 2.54e-37 138
Msa0741400 AT3G10480.3 36.449 214 86 5 18 192 27 229 8.96e-37 138
Msa0741400 AT1G34180.1 47.794 136 66 2 13 146 11 143 1.08e-36 138
Msa0741400 AT5G22290.1 32.787 244 140 6 14 252 17 241 5.89e-36 132
Msa0741400 AT2G27300.1 44.186 129 68 2 17 144 13 138 2.32e-35 130
Msa0741400 AT3G44290.2 45.669 127 65 2 19 144 15 138 1.31e-34 126
Msa0741400 AT1G34180.4 44.681 141 61 2 20 146 18 155 1.90e-34 130
Msa0741400 AT5G24590.2 37.500 240 106 8 13 237 2 212 2.54e-34 130
Msa0741400 AT3G44290.1 45.669 127 65 2 19 144 15 138 4.85e-34 127
Msa0741400 AT1G34180.2 43.243 148 67 2 13 146 11 155 5.59e-34 130
Msa0741400 AT5G64060.1 41.718 163 81 4 18 178 6 156 6.13e-34 127
Msa0741400 AT3G49530.2 41.104 163 82 4 19 178 13 164 6.47e-34 128
Msa0741400 AT4G28530.1 40.000 180 68 5 20 178 12 172 1.02e-33 127
Msa0741400 AT3G49530.1 41.104 163 82 4 19 178 13 164 2.12e-33 128
Msa0741400 AT1G32870.2 46.429 140 68 3 9 146 1 135 1.97e-29 117
Msa0741400 AT1G32870.1 46.429 140 68 3 9 146 1 135 2.00e-29 117
Msa0741400 AT5G04395.1 40.000 140 71 1 20 146 30 169 2.51e-29 110
Msa0741400 AT1G32870.3 46.429 140 68 3 9 146 37 171 3.14e-29 117
Msa0741400 AT5G61430.2 45.690 116 53 2 69 184 4 109 2.03e-27 108
Msa0741400 AT5G64530.2 39.844 128 64 3 20 147 5 119 2.98e-27 104
Msa0741400 AT5G64530.1 39.844 128 64 3 20 147 5 119 5.24e-27 105
Msa0741400 AT5G22380.1 35.593 177 98 6 15 185 3 169 4.67e-26 103
Msa0741400 AT3G12977.2 44.828 116 53 3 63 178 10 114 5.37e-26 103
Msa0741400 AT4G01550.1 41.985 131 73 2 19 146 5 135 4.02e-24 102
Msa0741400 AT4G10350.2 35.227 176 92 5 65 238 12 167 4.32e-24 99.8
Msa0741400 AT3G44350.2 33.721 172 95 5 21 185 8 167 3.88e-23 95.9
Msa0741400 AT1G56010.1 44.643 112 53 4 67 178 2 104 1.12e-22 95.1
Msa0741400 AT4G01520.1 39.231 130 75 3 21 146 7 136 3.96e-22 94.7
Msa0741400 AT4G01540.4 40.152 132 75 3 19 146 5 136 7.43e-22 95.1
Msa0741400 AT4G01540.3 40.152 132 75 3 19 146 5 136 1.21e-21 94.7
Msa0741400 AT4G01540.2 40.152 132 75 3 19 146 5 136 1.21e-21 94.7
Msa0741400 AT3G44350.1 36.486 148 82 5 21 160 8 151 1.32e-21 89.7
Msa0741400 AT4G01540.1 40.152 132 75 3 19 146 5 136 1.44e-21 95.1
Msa0741400 AT1G02230.1 39.844 128 70 4 21 144 6 130 7.47e-21 92.0
Msa0741400 AT1G02250.1 42.188 128 67 4 21 144 6 130 1.46e-20 91.3
Msa0741400 AT2G33480.3 43.396 106 48 3 71 176 8 101 1.62e-19 85.5
Msa0741400 AT4G28530.2 43.810 105 43 2 20 108 12 116 1.70e-19 87.4
Msa0741400 AT1G01010.1 38.255 149 79 5 14 152 2 147 1.42e-18 85.9
Msa0741400 AT3G04420.2 38.760 129 70 4 21 144 6 130 2.08e-17 81.3
Msa0741400 AT3G04420.1 38.760 129 70 4 21 144 6 130 6.56e-17 80.5
Msa0741400 AT1G02220.1 33.125 160 83 6 21 176 6 145 2.70e-14 73.2
Msa0741400 AT5G14000.2 32.812 128 79 3 21 146 18 140 3.90e-14 69.3
Msa0741400 AT2G18060.2 40.964 83 35 2 96 178 2 70 4.59e-14 71.6
Msa0741400 AT5G50820.1 36.552 145 73 7 20 157 19 151 5.54e-14 69.7
Msa0741400 AT5G14000.1 33.588 131 79 4 19 146 15 140 1.64e-13 68.9
Msa0741400 AT3G10490.4 39.604 101 46 5 91 187 2 91 1.37e-12 67.8
Msa0741400 AT3G10490.3 39.604 101 46 5 91 187 2 91 1.37e-12 67.8
Msa0741400 AT3G04430.1 32.331 133 77 3 24 145 6 136 7.54e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTCCCACCTACTCCTTTAT+TGG 0.218201 5_1:+61118378 Msa0741400:three_prime_UTR
GAGTGACAGGATCTGGATTT+TGG 0.226878 5_1:+61116141 Msa0741400:CDS
GAAATGAGTGGTTAAATCTT+TGG 0.258441 5_1:-61118094 None:intergenic
TTACAATCATAAACCTTTGA+TGG 0.272440 5_1:-61118260 None:intergenic
GAAGATGAAGTTGTGCTTCC+TGG 0.272458 5_1:+61115097 Msa0741400:CDS
GAAACCAAACCATTCATTAA+TGG 0.288779 5_1:+61118062 Msa0741400:CDS
AGATTCTATGCTGCATGTTT+TGG 0.299357 5_1:-61117976 None:intergenic
CACTCATTTCTAAATCAATT+AGG 0.323141 5_1:+61118107 Msa0741400:CDS
ATGCATCATCCAATCAGTTT+TGG 0.326620 5_1:-61116270 None:intergenic
CCAGATCCTGTCACTCTATT+AGG 0.347513 5_1:-61116134 None:intergenic
GTCCCACCTACTCCTTTATT+GGG 0.354068 5_1:+61118379 Msa0741400:three_prime_UTR
CATTGGACTCAAGAAATCAT+TGG 0.361070 5_1:+61116217 Msa0741400:CDS
GATTCTTTAACACAATATAT+AGG 0.374225 5_1:-61116185 None:intergenic
CCTAATAGAGTGACAGGATC+TGG 0.379091 5_1:+61116134 Msa0741400:CDS
ATGCATTTGCAAATGACAAT+TGG 0.379969 5_1:+61118201 Msa0741400:CDS
ATGTCCATTAATGAATGGTT+TGG 0.424757 5_1:-61118066 None:intergenic
GTTTAAGAGGAAGAAAATAC+AGG 0.449796 5_1:+61116099 Msa0741400:CDS
GTTTACTACCGTGGAAGTGC+AGG 0.450626 5_1:+61116239 Msa0741400:CDS
TCAAGAGTTTGTGGTACTCT+AGG 0.451886 5_1:+61115023 None:intergenic
TCAACATGTCCATTAATGAA+TGG 0.454980 5_1:-61118071 None:intergenic
AAGTGGAGAAGAAGCCTCTT+CGG 0.466564 5_1:+61115173 Msa0741400:CDS
GAAAATACAGGAACAGCATA+AGG 0.468401 5_1:+61116111 Msa0741400:CDS
CGACAAGCTCTTCATCTGTT+GGG 0.469693 5_1:-61115132 None:intergenic
AAGATGAAGTTGTGCTTCCT+GGG 0.478780 5_1:+61115098 Msa0741400:CDS
CCGACAAGCTCTTCATCTGT+TGG 0.485517 5_1:-61115133 None:intergenic
TGCATTTGCAAATGACAATT+GGG 0.486789 5_1:+61118202 Msa0741400:CDS
GGAAAGGCACCAAAACTGAT+TGG 0.496667 5_1:+61116261 Msa0741400:CDS
GAATTTCGTCTCCCACCTAA+AGG 0.503701 5_1:+61116293 Msa0741400:CDS
ACATATACAAATATGATCCA+TGG 0.505053 5_1:+61115218 Msa0741400:CDS
ATAAGGCCTAATAGAGTGAC+AGG 0.505529 5_1:+61116128 Msa0741400:CDS
CCAACAGATGAAGAGCTTGT+CGG 0.519704 5_1:+61115133 Msa0741400:CDS
TGCCTTTCCCTGCACTTCCA+CGG 0.525991 5_1:-61116247 None:intergenic
TATGAAGAAGCTAGTACTGT+GGG 0.526184 5_1:+61116053 Msa0741400:intron
TTGGAATGATCAAAATGTTG+TGG 0.532956 5_1:+61118175 Msa0741400:CDS
ATCTTACTTGGTAAATCCCA+TGG 0.534175 5_1:-61115235 None:intergenic
AATAAAGGAGTAGGTGGGAC+CGG 0.543514 5_1:-61118376 None:intergenic
AAAGAATCACATGAATGCAT+TGG 0.548150 5_1:+61116200 Msa0741400:CDS
GAGTGAGACAAGGTGGTAGT+TGG 0.549628 5_1:-61118146 None:intergenic
ATAAACCTTTGATGGATCAA+AGG 0.554674 5_1:-61118252 None:intergenic
CTGGTACCCAATAAAGGAGT+AGG 0.557540 5_1:-61118385 None:intergenic
CATATACAAATATGATCCAT+GGG 0.566140 5_1:+61115219 Msa0741400:CDS
GTTTACCTTTGATCCATCAA+AGG 0.568973 5_1:+61118247 Msa0741400:CDS
CTAATTGATTTAGAAATGAG+TGG 0.579913 5_1:-61118106 None:intergenic
TTGATGAGTTCAATCCGAAG+AGG 0.599169 5_1:-61115187 None:intergenic
AAATCATTGGTTTACTACCG+TGG 0.602151 5_1:+61116230 Msa0741400:CDS
TCATTGCTATGATTAAGAAG+TGG 0.602276 5_1:-61116332 None:intergenic
TACCGTGGAAGTGCAGGGAA+AGG 0.602637 5_1:+61116245 Msa0741400:CDS
ATATGAAGAAGCTAGTACTG+TGG 0.602894 5_1:+61116052 Msa0741400:intron
CAAGCTCTTCATCTGTTGGG+TGG 0.605521 5_1:-61115129 None:intergenic
TTTACTACCGTGGAAGTGCA+GGG 0.609761 5_1:+61116240 Msa0741400:CDS
GTACCCAATAAAGGAGTAGG+TGG 0.622376 5_1:-61118382 None:intergenic
TTTGTGAAAGTCAAGTATTG+TGG 0.625769 5_1:-61118011 None:intergenic
AATTTGCATTGCAGGAAGTG+TGG 0.627428 5_1:+61117850 Msa0741400:intron
TGAAGAAGCTAGTACTGTGG+GGG 0.635072 5_1:+61116055 Msa0741400:intron
ATGAAGAAGCTAGTACTGTG+GGG 0.683721 5_1:+61116054 Msa0741400:intron
GTTGGGTGGAATCTAAACCC+AGG 0.685010 5_1:-61115115 None:intergenic
TACCCAATAAAGGAGTAGGT+GGG 0.690506 5_1:-61118381 None:intergenic
AAAACTTGAGTGAGACAAGG+TGG 0.702923 5_1:-61118153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAAAATTATGTAAAA+AGG + chr5_1:61115538-61115557 Msa0741400:intron 10.0%
!! TTTAAAAGAATATACTATAT+TGG + chr5_1:61116561-61116580 Msa0741400:intron 10.0%
!!! ATTTTTATCAAAACTTTCAT+TGG + chr5_1:61116391-61116410 Msa0741400:intron 15.0%
!!! AAAAAAAACTCATGTATTTT+TGG - chr5_1:61116652-61116671 None:intergenic 15.0%
!!! GTTTATTGTATAAATTGTTT+TGG + chr5_1:61116690-61116709 Msa0741400:intron 15.0%
!!! GTAAATTAATTGTTTTGAAT+TGG - chr5_1:61116823-61116842 None:intergenic 15.0%
!! TAATCTTGCAAAATATATAT+TGG + chr5_1:61116899-61116918 Msa0741400:intron 15.0%
!!! TTTTTACTTATAATAGTAAC+CGG + chr5_1:61117544-61117563 Msa0741400:intron 15.0%
!! TTATAATTAAAATAATGCCT+TGG + chr5_1:61117676-61117695 Msa0741400:intron 15.0%
!! CATTAACATATAATTATGAG+AGG - chr5_1:61115269-61115288 None:intergenic 20.0%
!! TATATGCATGTTTACATTAT+AGG + chr5_1:61115914-61115933 Msa0741400:intron 20.0%
!! CATATATTACAATCAAAATG+GGG - chr5_1:61115974-61115993 None:intergenic 20.0%
!! CCATATATTACAATCAAAAT+GGG - chr5_1:61115975-61115994 None:intergenic 20.0%
!! ACCATATATTACAATCAAAA+TGG - chr5_1:61115976-61115995 None:intergenic 20.0%
!! TGTTCTTGAATTTACATATA+TGG + chr5_1:61116018-61116037 Msa0741400:intron 20.0%
!! GATTCTTTAACACAATATAT+AGG - chr5_1:61116188-61116207 None:intergenic 20.0%
!!! TGGTTTTGCATTTATAATTA+AGG + chr5_1:61116411-61116430 Msa0741400:intron 20.0%
!!! GGTTTTGCATTTATAATTAA+GGG + chr5_1:61116412-61116431 Msa0741400:intron 20.0%
!!! GTTTTGCATTTATAATTAAG+GGG + chr5_1:61116413-61116432 Msa0741400:intron 20.0%
!!! GTATATTCTTTTAAACATAC+CGG - chr5_1:61116556-61116575 None:intergenic 20.0%
!! AATAACATCTTAAATGGTTA+TGG + chr5_1:61116589-61116608 Msa0741400:intron 20.0%
!! AACAAACTTATGAAAATATC+TGG + chr5_1:61116756-61116775 Msa0741400:intron 20.0%
!!! TGTTTTGAATTGGTTTTTTT+AGG - chr5_1:61116813-61116832 None:intergenic 20.0%
!! TTAGTCAATTAAAAGTCATT+TGG - chr5_1:61116882-61116901 None:intergenic 20.0%
!!! TTGTTTCTTATAATAAAGAC+CGG - chr5_1:61117204-61117223 None:intergenic 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG + chr5_1:61117214-61117233 Msa0741400:intron 20.0%
!!! GTCAACTTTTTCTTATAATA+AGG + chr5_1:61117308-61117327 Msa0741400:intron 20.0%
!! ATTGAATAAGTGATATATGT+CGG - chr5_1:61117508-61117527 None:intergenic 20.0%
!! TTTATAAATTATACAACCTC+CGG - chr5_1:61117566-61117585 None:intergenic 20.0%
!! TAATGTGAATAAGTAAAAGT+TGG - chr5_1:61117606-61117625 None:intergenic 20.0%
!!! TTTGTTTTTAACATACTGTA+TGG + chr5_1:61117827-61117846 Msa0741400:intron 20.0%
!!! AAGTACATATAACAATTTTC+CGG + chr5_1:61118357-61118376 Msa0741400:three_prime_UTR 20.0%
! ACATATACAAATATGATCCA+TGG + chr5_1:61115218-61115237 Msa0741400:CDS 25.0%
! CATATACAAATATGATCCAT+GGG + chr5_1:61115219-61115238 Msa0741400:CDS 25.0%
!! TCAGATTGTTGTTCAATAAT+AGG + chr5_1:61115803-61115822 Msa0741400:intron 25.0%
!!! CCCATTTTGATTGTAATATA+TGG + chr5_1:61115972-61115991 Msa0741400:intron 25.0%
!!! TGCTATTTCTTTTGTTTAAG+AGG + chr5_1:61116086-61116105 Msa0741400:CDS 25.0%
!!! TTATTGCTAGTTTTTCCTTT+AGG - chr5_1:61116311-61116330 None:intergenic 25.0%
! GAAGAGAATAACATCTTAAA+TGG + chr5_1:61116583-61116602 Msa0741400:intron 25.0%
!! TAATCTCTGACTTTTAAATG+TGG + chr5_1:61116613-61116632 Msa0741400:intron 25.0%
!! ACTTTTAAATGTGGATATCT+TGG + chr5_1:61116622-61116641 Msa0741400:intron 25.0%
! AAACTTATGAAAATATCTGG+CGG + chr5_1:61116759-61116778 Msa0741400:intron 25.0%
!!! ACACTTTTTTTGTTTTTTCG+AGG + chr5_1:61116927-61116946 Msa0741400:intron 25.0%
!!! CACTTTTTTTGTTTTTTCGA+GGG + chr5_1:61116928-61116947 Msa0741400:intron 25.0%
!!! ACTTTTTTTGTTTTTTCGAG+GGG + chr5_1:61116929-61116948 Msa0741400:intron 25.0%
!! CTTTTTCTTATAATAAGGAC+CGG + chr5_1:61117313-61117332 Msa0741400:intron 25.0%
! AATATCAAACATACATCATC+TGG + chr5_1:61117413-61117432 Msa0741400:intron 25.0%
!!! TAAGTAAAAGTTGGTTTTGT+AGG - chr5_1:61117597-61117616 None:intergenic 25.0%
!! AACAAAAACACACTTTTCAA+AGG - chr5_1:61117813-61117832 None:intergenic 25.0%
!! CTAATTGATTTAGAAATGAG+TGG - chr5_1:61118109-61118128 None:intergenic 25.0%
! CACTCATTTCTAAATCAATT+AGG + chr5_1:61118107-61118126 Msa0741400:CDS 25.0%
! TTACAATCATAAACCTTTGA+TGG - chr5_1:61118263-61118282 None:intergenic 25.0%
!!! CTCTAGGATTTTGACAAATA+TGG + chr5_1:61115039-61115058 Msa0741400:exon 30.0%
!! GATTTTGACAAATATGGATG+TGG + chr5_1:61115045-61115064 Msa0741400:exon 30.0%
GAGGAGAATAAAATCTTACT+TGG - chr5_1:61115250-61115269 None:intergenic 30.0%
AGACTCATCATAATTGTACT+CGG + chr5_1:61115485-61115504 Msa0741400:intron 30.0%
CATGTTTACATTATAGGCTA+TGG + chr5_1:61115920-61115939 Msa0741400:intron 30.0%
GTTTAAGAGGAAGAAAATAC+AGG + chr5_1:61116099-61116118 Msa0741400:CDS 30.0%
AAAGAATCACATGAATGCAT+TGG + chr5_1:61116200-61116219 Msa0741400:CDS 30.0%
TCATTGCTATGATTAAGAAG+TGG - chr5_1:61116335-61116354 None:intergenic 30.0%
CTTTACATACGATTCTAGAT+GGG - chr5_1:61117053-61117072 None:intergenic 30.0%
TCTTTACATACGATTCTAGA+TGG - chr5_1:61117054-61117073 None:intergenic 30.0%
ACAACATTAATGCTGAGATT+TGG + chr5_1:61117111-61117130 Msa0741400:intron 30.0%
CAACATTAATGCTGAGATTT+GGG + chr5_1:61117112-61117131 Msa0741400:intron 30.0%
AACATTAATGCTGAGATTTG+GGG + chr5_1:61117113-61117132 Msa0741400:intron 30.0%
!! AACTCGTTCATTTTCAAGAT+AGG + chr5_1:61117141-61117160 Msa0741400:intron 30.0%
ATTAAACTTTGTACTTCCTC+CGG + chr5_1:61117182-61117201 Msa0741400:intron 30.0%
TTTCTTATAATAAAGACCGG+AGG - chr5_1:61117201-61117220 None:intergenic 30.0%
TTACTTATAATAGTAACCGG+AGG + chr5_1:61117547-61117566 Msa0741400:intron 30.0%
!! AATAGATTTTGATACGTCCA+AGG - chr5_1:61117696-61117715 None:intergenic 30.0%
TGGACGTATCAAAATCTATT+AGG + chr5_1:61117696-61117715 Msa0741400:intron 30.0%
ATGACATGTACATAGACAAA+AGG + chr5_1:61117730-61117749 Msa0741400:intron 30.0%
! GTGTGTATTTTCTGTATGAT+GGG - chr5_1:61117902-61117921 None:intergenic 30.0%
!!! TCTGAGTCTTTTTTCACATT+TGG - chr5_1:61117924-61117943 None:intergenic 30.0%
! TTTGTGAAAGTCAAGTATTG+TGG - chr5_1:61118014-61118033 None:intergenic 30.0%
GAAACCAAACCATTCATTAA+TGG + chr5_1:61118062-61118081 Msa0741400:CDS 30.0%
ATGTCCATTAATGAATGGTT+TGG - chr5_1:61118069-61118088 None:intergenic 30.0%
TCAACATGTCCATTAATGAA+TGG - chr5_1:61118074-61118093 None:intergenic 30.0%
GAAATGAGTGGTTAAATCTT+TGG - chr5_1:61118097-61118116 None:intergenic 30.0%
TTGGAATGATCAAAATGTTG+TGG + chr5_1:61118175-61118194 Msa0741400:CDS 30.0%
ATGCATTTGCAAATGACAAT+TGG + chr5_1:61118201-61118220 Msa0741400:CDS 30.0%
TGCATTTGCAAATGACAATT+GGG + chr5_1:61118202-61118221 Msa0741400:CDS 30.0%
! ATAAACCTTTGATGGATCAA+AGG - chr5_1:61118255-61118274 None:intergenic 30.0%
! AGCTTGTCGGATTTTATCTA+CGG + chr5_1:61115146-61115165 Msa0741400:CDS 35.0%
! ATTTTATCTACGGCGAAAAG+TGG + chr5_1:61115156-61115175 Msa0741400:CDS 35.0%
ATCTTACTTGGTAAATCCCA+TGG - chr5_1:61115238-61115257 None:intergenic 35.0%
CATCATAATTGTACTCGGTT+CGG + chr5_1:61115490-61115509 Msa0741400:intron 35.0%
ATATGAAGAAGCTAGTACTG+TGG + chr5_1:61116052-61116071 Msa0741400:intron 35.0%
TATGAAGAAGCTAGTACTGT+GGG + chr5_1:61116053-61116072 Msa0741400:intron 35.0%
GAAAATACAGGAACAGCATA+AGG + chr5_1:61116111-61116130 Msa0741400:CDS 35.0%
CATTGGACTCAAGAAATCAT+TGG + chr5_1:61116217-61116236 Msa0741400:CDS 35.0%
!! AAATCATTGGTTTACTACCG+TGG + chr5_1:61116230-61116249 Msa0741400:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG - chr5_1:61116273-61116292 None:intergenic 35.0%
!!! TGCTAGTTTTTCCTTTAGGT+GGG - chr5_1:61116307-61116326 None:intergenic 35.0%
!!! TTGCTAGTTTTTCCTTTAGG+TGG - chr5_1:61116308-61116327 None:intergenic 35.0%
ACCAATGAACACATGCTTAA+GGG - chr5_1:61116522-61116541 None:intergenic 35.0%
AACCAATGAACACATGCTTA+AGG - chr5_1:61116523-61116542 None:intergenic 35.0%
! TCTTTTAAACATACCGGTCA+AGG - chr5_1:61116550-61116569 None:intergenic 35.0%
!!! TTTTGTTTTTTCGAGGGGAT+TGG + chr5_1:61116934-61116953 Msa0741400:intron 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr5_1:61117316-61117335 Msa0741400:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr5_1:61117317-61117336 Msa0741400:intron 35.0%
! GGTGTGTATTTTCTGTATGA+TGG - chr5_1:61117903-61117922 None:intergenic 35.0%
! AGATTCTATGCTGCATGTTT+TGG - chr5_1:61117979-61117998 None:intergenic 35.0%
GTTTACCTTTGATCCATCAA+AGG + chr5_1:61118247-61118266 Msa0741400:CDS 35.0%
! TTTTCACTGGTACCCAATAA+AGG - chr5_1:61118394-61118413 None:intergenic 35.0%
AAGATGAAGTTGTGCTTCCT+GGG + chr5_1:61115098-61115117 Msa0741400:CDS 40.0%
TTGATGAGTTCAATCCGAAG+AGG - chr5_1:61115190-61115209 None:intergenic 40.0%
ATAAAGCAGTCGTAGAGATC+AGG - chr5_1:61115358-61115377 None:intergenic 40.0%
ACGACTGCTTTATGATGCAT+CGG + chr5_1:61115365-61115384 Msa0741400:intron 40.0%
! AAGGTGTTTATTGCATGCAG+TGG + chr5_1:61115557-61115576 Msa0741400:intron 40.0%
TAGGCTATGGATCTATAGCT+AGG + chr5_1:61115933-61115952 Msa0741400:intron 40.0%
ATGAAGAAGCTAGTACTGTG+GGG + chr5_1:61116054-61116073 Msa0741400:intron 40.0%
ATAAGGCCTAATAGAGTGAC+AGG + chr5_1:61116128-61116147 Msa0741400:CDS 40.0%
!! TCTGGATTTTGGAAAGCTAC+AGG + chr5_1:61116152-61116171 Msa0741400:CDS 40.0%
!! CTGGATTTTGGAAAGCTACA+GGG + chr5_1:61116153-61116172 Msa0741400:CDS 40.0%
TCGTTATCGAGTCACATTGT+TGG - chr5_1:61116497-61116516 None:intergenic 40.0%
TCCCTTAAGCATGTGTTCAT+TGG + chr5_1:61116518-61116537 Msa0741400:intron 40.0%
!! TCATTGGTTTGATCCTTGAC+CGG + chr5_1:61116534-61116553 Msa0741400:intron 40.0%
! TTAATGCTGAGATTTGGGGT+TGG + chr5_1:61117117-61117136 Msa0741400:intron 40.0%
GTGTAGAATAATACTCCCTC+CGG - chr5_1:61117335-61117354 None:intergenic 40.0%
! TTCACATTAGCTCTCTAGCA+TGG + chr5_1:61117617-61117636 Msa0741400:intron 40.0%
CTGTATGGAATTTGCATTGC+AGG + chr5_1:61117842-61117861 Msa0741400:intron 40.0%
AATTTGCATTGCAGGAAGTG+TGG + chr5_1:61117850-61117869 Msa0741400:intron 40.0%
AAAACTTGAGTGAGACAAGG+TGG - chr5_1:61118156-61118175 None:intergenic 40.0%
CCAAAAACTTGAGTGAGACA+AGG - chr5_1:61118159-61118178 None:intergenic 40.0%
! CCTTGTCTCACTCAAGTTTT+TGG + chr5_1:61118156-61118175 Msa0741400:CDS 40.0%
TACCCAATAAAGGAGTAGGT+GGG - chr5_1:61118384-61118403 None:intergenic 40.0%
GAAGATGAAGTTGTGCTTCC+TGG + chr5_1:61115097-61115116 Msa0741400:CDS 45.0%
CGACAAGCTCTTCATCTGTT+GGG - chr5_1:61115135-61115154 None:intergenic 45.0%
CCAACAGATGAAGAGCTTGT+CGG + chr5_1:61115133-61115152 Msa0741400:CDS 45.0%
AAGTGGAGAAGAAGCCTCTT+CGG + chr5_1:61115173-61115192 Msa0741400:CDS 45.0%
TGAAGAAGCTAGTACTGTGG+GGG + chr5_1:61116055-61116074 Msa0741400:intron 45.0%
CCAGATCCTGTCACTCTATT+AGG - chr5_1:61116137-61116156 None:intergenic 45.0%
CCTAATAGAGTGACAGGATC+TGG + chr5_1:61116134-61116153 Msa0741400:CDS 45.0%
! GAGTGACAGGATCTGGATTT+TGG + chr5_1:61116141-61116160 Msa0741400:CDS 45.0%
! TTTACTACCGTGGAAGTGCA+GGG + chr5_1:61116240-61116259 Msa0741400:CDS 45.0%
!! GGAAAGGCACCAAAACTGAT+TGG + chr5_1:61116261-61116280 Msa0741400:CDS 45.0%
GAATTTCGTCTCCCACCTAA+AGG + chr5_1:61116293-61116312 Msa0741400:CDS 45.0%
AATAAAGGAGTAGGTGGGAC+CGG - chr5_1:61118379-61118398 None:intergenic 45.0%
GTCCCACCTACTCCTTTATT+GGG + chr5_1:61118379-61118398 Msa0741400:three_prime_UTR 45.0%
GTACCCAATAAAGGAGTAGG+TGG - chr5_1:61118385-61118404 None:intergenic 45.0%
CTGGTACCCAATAAAGGAGT+AGG - chr5_1:61118388-61118407 None:intergenic 45.0%
!!! TTTTTTTTATATATTTTATG+AGG - chr5_1:61117377-61117396 None:intergenic 5.0%
GTTGGGTGGAATCTAAACCC+AGG - chr5_1:61115118-61115137 None:intergenic 50.0%
CAAGCTCTTCATCTGTTGGG+TGG - chr5_1:61115132-61115151 None:intergenic 50.0%
CCGACAAGCTCTTCATCTGT+TGG - chr5_1:61115136-61115155 None:intergenic 50.0%
AGCTAGTACTGTGGGGGAAA+AGG + chr5_1:61116061-61116080 Msa0741400:CDS 50.0%
! GTTTACTACCGTGGAAGTGC+AGG + chr5_1:61116239-61116258 Msa0741400:CDS 50.0%
GAGTGAGACAAGGTGGTAGT+TGG - chr5_1:61118149-61118168 None:intergenic 50.0%
GGTCCCACCTACTCCTTTAT+TGG + chr5_1:61118378-61118397 Msa0741400:three_prime_UTR 50.0%
TTGTTGCACCGCTGTACCGT+GGG - chr5_1:61115523-61115542 None:intergenic 55.0%
TTTGTTGCACCGCTGTACCG+TGG - chr5_1:61115524-61115543 None:intergenic 55.0%
! TACCGTGGAAGTGCAGGGAA+AGG + chr5_1:61116245-61116264 Msa0741400:CDS 55.0%
TGCCTTTCCCTGCACTTCCA+CGG - chr5_1:61116250-61116269 None:intergenic 55.0%
!! TCGGTTCGGTTCCACTCCCA+CGG + chr5_1:61115504-61115523 Msa0741400:intron 60.0%
GTTCCACTCCCACGGTACAG+CGG + chr5_1:61115512-61115531 Msa0741400:intron 60.0%
GCACCGCTGTACCGTGGGAG+TGG - chr5_1:61115518-61115537 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 61115034 61118413 61115034 ID=Msa0741400;Name=Msa0741400
chr5_1 mRNA 61115034 61118413 61115034 ID=Msa0741400-mRNA-1;Parent=Msa0741400;Name=Msa0741400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=24|1|1|1|1|1|3|118|310
chr5_1 exon 61115034 61115250 61115034 ID=Msa0741400-mRNA-1:exon:17650;Parent=Msa0741400-mRNA-1
chr5_1 exon 61116060 61116367 61116060 ID=Msa0741400-mRNA-1:exon:17651;Parent=Msa0741400-mRNA-1
chr5_1 exon 61117864 61118413 61117864 ID=Msa0741400-mRNA-1:exon:17652;Parent=Msa0741400-mRNA-1
chr5_1 five_prime_UTR 61115034 61115057 61115034 ID=Msa0741400-mRNA-1:five_prime_utr;Parent=Msa0741400-mRNA-1
chr5_1 CDS 61115058 61115250 61115058 ID=Msa0741400-mRNA-1:cds;Parent=Msa0741400-mRNA-1
chr5_1 CDS 61116060 61116367 61116060 ID=Msa0741400-mRNA-1:cds;Parent=Msa0741400-mRNA-1
chr5_1 CDS 61117864 61118295 61117864 ID=Msa0741400-mRNA-1:cds;Parent=Msa0741400-mRNA-1
chr5_1 three_prime_UTR 61118296 61118413 61118296 ID=Msa0741400-mRNA-1:three_prime_utr;Parent=Msa0741400-mRNA-1
Gene Sequence

>Msa0741400

ATGGATGTGGCAAAGTTAGATAACTTTGATGTCAAGAAAGAAGATGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGAAGAGCTTGTCGGATTTTATCTACGGCGAAAAGTGGAGAAGAAGCCTCTTCGGATTGAACTCATCAAAGAGATTGACATATACAAATATGATCCATGGGATTTACCAAAAGCTAGTACTGTGGGGGAAAAGGAATGCTATTTCTTTTGTTTAAGAGGAAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTGACAGGATCTGGATTTTGGAAAGCTACAGGGATTGATAAACCTATATATTGTGTTAAAGAATCACATGAATGCATTGGACTCAAGAAATCATTGGTTTACTACCGTGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGTCTCCCACCTAAAGGAAAAACTAGCAATAATCCACTTCTTAATCATAGCAATGATGTTCAAGAAGCTGAAGTGTGGACACTATGCAGAATTTTCAAACGAATCCCATCATACAGAAAATACACACCAAATGTGAAAAAAGACTCAGAAGAAGCAGCATTCACTATTAACTCTTCAAGTTCCAAAACATGCAGCATAGAATCTGACAACAGCAAACCACAATACTTGACTTTCACAAACTCACAACATGTTGTTCAACAGAATCATGAAACCAAACCATTCATTAATGGACATGTTGACCAAAGATTTAACCACTCATTTCTAAATCAATTAGGCAATGTAGCACAAGTTCCAACTACCACCTTGTCTCACTCAAGTTTTTGGAATGATCAAAATGTTGTGGATGATGCATTTGCAAATGACAATTGGGATGATCTTACATCTGTTGTTCAGTTTACCTTTGATCCATCAAAGGTTTATGATTGTAAAGATTTTAATTAG
Protein sequence

>Msa0741400

MDVAKLDNFDVKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKEIDIYKYDPWDLPKASTVGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTSNNPLLNHSNDVQEAEVWTLCRIFKRIPSYRKYTPNVKKDSEEAAFTINSSSSKTCSIESDNSKPQYLTFTNSQHVVQQNHETKPFINGHVDQRFNHSFLNQLGNVAQVPTTTLSHSSFWNDQNVVDDAFANDNWDDLTSVVQFTFDPSKVYDCKDFN*