AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027600 MtrunA17_Chr7g0246631 98.072 778 15 0 1 778 1 778 0.0 1583
Msa1027600 MtrunA17_Chr8g0350321 80.454 793 128 11 1 778 30 810 0.0 1272
Msa1027600 MtrunA17_Chr1g0203671 64.085 749 231 9 53 775 54 790 0.0 947
Msa1027600 MtrunA17_Chr4g0024351 53.614 761 312 13 30 778 2 733 0.0 774
Msa1027600 MtrunA17_Chr6g0472471 51.535 782 323 18 27 774 6 765 0.0 769
Msa1027600 MtrunA17_Chr2g0322731 54.521 752 307 14 37 777 41 768 0.0 769
Msa1027600 MtrunA17_Chr6g0481041 49.086 711 327 11 91 778 29 727 0.0 661
Msa1027600 MtrunA17_Chr5g0410711 43.525 749 372 18 55 774 52 778 0.0 599
Msa1027600 MtrunA17_Chr2g0331581 43.043 690 346 10 95 777 143 792 0.0 595
Msa1027600 MtrunA17_Chr5g0394111 41.127 710 329 14 74 774 17 646 1.08e-169 504
Msa1027600 MtrunA17_Chr7g0224451 42.137 496 215 10 85 572 10 441 4.96e-123 376
Msa1027600 MtrunA17_Chr2g0292731 37.037 486 293 8 295 774 70 548 9.57e-98 314
Msa1027600 MtrunA17_Chr2g0292741 36.157 484 295 8 295 774 62 535 8.35e-94 303
Msa1027600 MtrunA17_Chr7g0224481 41.085 387 165 7 85 465 10 339 7.28e-87 278
Msa1027600 MtrunA17_Chr7g0224491 45.171 321 138 10 468 776 1 295 5.01e-76 248
Msa1027600 MtrunA17_Chr2g0292761 30.669 613 344 20 170 774 1 540 2.84e-73 248
Msa1027600 MtrunA17_Chr5g0419821 53.279 122 56 1 91 211 33 154 8.49e-38 139
Msa1027600 MtrunA17_Chr2g0319671 30.605 281 148 5 290 538 19 284 8.22e-36 137
Msa1027600 MtrunA17_Chr2g0319701 37.607 234 135 6 549 778 1 227 1.03e-35 135
Msa1027600 MtrunA17_Chr2g0319681 34.335 233 146 4 549 778 1 229 3.97e-32 125
Msa1027600 MtrunA17_Chr2g0319691 40.945 127 68 2 403 528 1 121 1.88e-26 105
Msa1027600 MtrunA17_Chr1g0205981 33.333 207 102 6 146 339 1 184 7.03e-24 100
Msa1027600 MtrunA17_Chr7g0224461 47.967 123 47 4 664 776 1 116 4.09e-23 95.1
Msa1027600 MtrunA17_Chr2g0304191 36.029 136 77 2 297 427 1 131 5.43e-22 92.4
Msa1027600 MtrunA17_Chr2g0331131 21.247 786 425 29 67 774 2 671 1.66e-20 97.1
Msa1027600 MtrunA17_Chr7g0224431 34.146 164 64 2 312 475 1 120 2.04e-18 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027600 AT4G00730.1 69.470 773 211 8 11 778 50 802 0.0 1058
Msa1027600 AT3G61150.1 64.464 802 233 13 1 778 34 807 0.0 1010
Msa1027600 AT4G04890.2 54.339 749 274 12 69 777 18 738 0.0 790
Msa1027600 AT4G04890.1 54.339 749 274 12 69 777 18 738 0.0 790
Msa1027600 AT4G21750.2 55.116 733 263 11 84 777 55 760 0.0 769
Msa1027600 AT4G21750.1 55.116 733 263 11 84 777 55 760 0.0 769
Msa1027600 AT4G21750.3 55.116 733 263 11 84 777 55 760 0.0 769
Msa1027600 AT4G21750.4 55.116 733 263 11 84 777 55 760 0.0 769
Msa1027600 AT1G05230.8 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.4 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.9 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.10 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.7 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.11 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.2 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.6 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.5 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.1 52.732 732 309 13 50 778 23 720 0.0 757
Msa1027600 AT1G05230.3 52.732 732 307 14 50 778 23 718 0.0 753
Msa1027600 AT5G52170.3 53.259 721 266 12 61 775 24 679 0.0 743
Msa1027600 AT5G52170.1 53.259 721 266 12 61 775 24 679 0.0 743
Msa1027600 AT5G52170.2 52.893 726 266 13 61 775 24 684 0.0 736
Msa1027600 AT4G00730.2 65.844 527 157 7 11 532 50 558 0.0 683
Msa1027600 AT1G73360.1 47.783 699 333 10 91 774 32 713 0.0 625
Msa1027600 AT1G17920.2 46.429 700 322 14 94 778 24 685 0.0 614
Msa1027600 AT1G17920.1 46.429 700 322 14 94 778 24 685 0.0 614
Msa1027600 AT1G05230.12 50.903 609 268 12 50 655 23 603 0.0 605
Msa1027600 AT2G32370.1 43.966 696 343 11 91 778 68 724 0.0 577
Msa1027600 AT1G79840.1 41.774 699 347 12 88 777 98 745 0.0 560
Msa1027600 AT1G79840.3 41.774 699 347 12 88 777 40 687 0.0 559
Msa1027600 AT1G79840.6 41.774 699 347 12 88 777 40 687 0.0 559
Msa1027600 AT1G79840.2 41.774 699 347 12 88 777 127 774 0.0 558
Msa1027600 AT5G46880.3 41.806 720 373 17 84 774 104 806 3.55e-175 524
Msa1027600 AT5G46880.1 41.806 720 373 17 84 774 104 806 3.55e-175 524
Msa1027600 AT5G46880.2 41.806 720 373 17 84 774 104 806 3.55e-175 524
Msa1027600 AT4G25530.1 39.916 714 369 17 73 778 25 686 6.83e-163 488
Msa1027600 AT1G79840.4 41.549 568 283 9 88 651 98 620 9.35e-155 465
Msa1027600 AT4G17710.1 40.404 693 333 18 89 774 84 703 1.21e-150 457
Msa1027600 AT3G03260.1 36.512 734 396 20 73 776 3 696 2.88e-142 435
Msa1027600 AT5G17320.1 34.865 740 419 20 73 777 7 718 5.59e-127 396
Msa1027600 AT1G34650.1 34.459 711 410 21 98 777 23 708 6.15e-115 364
Msa1027600 AT1G79840.5 40.583 446 218 7 88 530 98 499 7.14e-109 342
Msa1027600 AT3G03260.2 35.450 567 319 15 73 623 3 538 1.40e-104 332
Msa1027600 AT5G07260.1 27.143 560 326 16 157 712 10 491 1.14e-52 192
Msa1027600 AT5G07260.2 27.240 558 323 16 157 712 10 486 1.30e-52 192
Msa1027600 AT1G30490.1 40.000 100 53 3 79 174 6 102 9.15e-13 72.4

Find 191 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCTATTT+TGG 0.092193 7_1:+60073529 None:intergenic
GGCTCTTGTTGAAACTTTAA+TGG 0.179447 7_1:-60072623 Msa1027600:CDS
CAGTTGTAGAGCACCATTTC+TGG 0.218972 7_1:+60072055 None:intergenic
ATGCCTTTAGGTCAAGATTT+TGG 0.233318 7_1:-60072955 Msa1027600:CDS
CTAAGCTTAGGCATGGGTTT+TGG 0.241414 7_1:-60069569 Msa1027600:CDS
TCAAACCATTATTTGTTTGA+TGG 0.255996 7_1:+60073894 None:intergenic
GAGTTTGGTAACGACGTAAT+TGG 0.264874 7_1:+60073027 None:intergenic
ATTTCTACTTTGATGAGTTT+TGG 0.265456 7_1:-60074183 Msa1027600:five_prime_UTR
GTGATATCTAGTGGAATAAA+TGG 0.274598 7_1:-60072080 Msa1027600:CDS
CACAAACTAATGAGCCTCTT+TGG 0.274681 7_1:-60072789 Msa1027600:CDS
GATAACATGGATGGTATTTC+TGG 0.280364 7_1:-60073824 Msa1027600:CDS
AATTTCCATCAAACAAATAA+TGG 0.293878 7_1:-60073899 Msa1027600:CDS
AGCTTCTCTGATGGTATCTA+TGG 0.310496 7_1:+60071781 None:intergenic
ACACTTGCCGGCAAGTTTCT+AGG 0.314978 7_1:-60073054 Msa1027600:CDS
CCAATTTCTAAACTCGAGTT+TGG 0.322467 7_1:+60073012 None:intergenic
CCAAACTCGAGTTTAGAAAT+TGG 0.322627 7_1:-60073012 Msa1027600:CDS
AAACAAGACAAGTCAAGTTT+TGG 0.322654 7_1:-60073554 Msa1027600:CDS
CCCTTTAGTTTGGAAATTCT+AGG 0.328490 7_1:-60074324 None:intergenic
GGAATGTGGGCGAGGACGTT+AGG 0.329094 7_1:-60069210 Msa1027600:CDS
ACTTAGCAAAAGGCTTTGTT+TGG 0.341498 7_1:-60073577 Msa1027600:CDS
TATGTTTCTTGAACTTGCTT+TGG 0.349553 7_1:-60072839 Msa1027600:CDS
AACTGTAGGAGGCTTCCTTC+TGG 0.355417 7_1:-60071734 Msa1027600:CDS
TTGCCTTCAACAATGCCTTT+AGG 0.357400 7_1:-60072967 Msa1027600:CDS
GACCGAGTTTGTACACTTGC+CGG 0.358469 7_1:-60073066 Msa1027600:CDS
GGTGCACAAATGGAACAAAT+TGG 0.362490 7_1:-60069239 Msa1027600:CDS
TTCATTACTACATGCATTGC+AGG 0.364670 7_1:+60067664 None:intergenic
CACAAAAGTTGTTTGTCATT+CGG 0.369193 7_1:+60069281 None:intergenic
TGAACTTGCTTTGGCTGCAA+TGG 0.370269 7_1:-60072830 Msa1027600:CDS
AAATCCATGTTCAACTCATC+TGG 0.372663 7_1:-60074092 Msa1027600:CDS
TCGTTTATCAACTCCTACTT+TGG 0.381588 7_1:-60074117 Msa1027600:CDS
ATTATTAGTACTCCTTGTAT+TGG 0.382879 7_1:-60072712 Msa1027600:CDS
GCCTCAGAAACAAAACCATT+TGG 0.385246 7_1:+60072682 None:intergenic
TGGTGATATGAAGAGATTAA+TGG 0.385985 7_1:-60073927 Msa1027600:CDS
GTCTATAGAGCTGGTGAACT+TGG 0.390142 7_1:+60069597 None:intergenic
GTGCATCGACGGTGCACAAA+TGG 0.392526 7_1:-60069249 Msa1027600:CDS
AAGGTTCTTCATACATAAGT+AGG 0.394586 7_1:+60074232 None:intergenic
TTTGTTCCTCTTGTAATTGA+AGG 0.396389 7_1:+60072913 None:intergenic
TATGCCAAATGGTTACTCTA+AGG 0.401101 7_1:-60071696 Msa1027600:intron
AGCAGCATGCAGAAGGGGTA+TGG 0.402136 7_1:-60071820 Msa1027600:CDS
ATTTCCTGCAGTCGTGATAA+TGG 0.402875 7_1:+60067246 None:intergenic
TTGATTATATCAGACTCAAT+TGG 0.408893 7_1:-60073271 Msa1027600:intron
GTTGCCATGGTCATGTCCTT+TGG 0.409163 7_1:+60069003 None:intergenic
AATTACAAGAGGAACAAATA+TGG 0.409950 7_1:-60072908 Msa1027600:CDS
GTAGACTGTTCACAAGTATC+TGG 0.411280 7_1:+60067506 None:intergenic
GGAATAAATGGAACCAGAAA+TGG 0.422357 7_1:-60072068 Msa1027600:CDS
ATTACCTTAGAGTAACCATT+TGG 0.422663 7_1:+60071692 None:intergenic
CTCCCGTCGCTATGTCCATC+TGG 0.423743 7_1:+60067589 None:intergenic
TGGACGGCCTAGAAACTTGC+CGG 0.428194 7_1:+60073047 None:intergenic
AATTCAGTTTCGTAGTTATG+AGG 0.433481 7_1:-60067210 Msa1027600:three_prime_UTR
GAACATGAAAGCTGCAGATC+TGG 0.433822 7_1:-60073851 Msa1027600:CDS
AAGGAAGAGTGTGGATGATC+CGG 0.443006 7_1:-60069179 Msa1027600:CDS
TGTATTGGTTTAAAACCAAA+TGG 0.443568 7_1:-60072697 Msa1027600:CDS
GAAACAAACACAGACGCATC+GGG 0.454001 7_1:-60067718 Msa1027600:CDS
TGACCTAAAGGCATTGTTGA+AGG 0.455945 7_1:+60072964 None:intergenic
GGATGATCCGGGTGAGCCAC+CGG 0.456267 7_1:-60069167 Msa1027600:CDS
CAGAAATGGTGCTCTACAAC+TGG 0.456843 7_1:-60072054 Msa1027600:intron
GGTTGTGAGATTGCACTAGA+AGG 0.460615 7_1:+60074140 None:intergenic
GACATTCACATTGGCGTTGG+AGG 0.461547 7_1:+60069525 None:intergenic
AGAAAACTCACCTCACGAAC+AGG 0.469601 7_1:+60071854 None:intergenic
GAATGTGGGCGAGGACGTTA+GGG 0.470341 7_1:-60069209 Msa1027600:CDS
ACAATCCCCGGTGGCTCACC+CGG 0.478000 7_1:+60069160 None:intergenic
TTATGTTGCGCTTCTTCCGT+CGG 0.480355 7_1:-60067626 Msa1027600:CDS
AAAGACTTGAACTTAGCAAA+AGG 0.481146 7_1:-60073587 Msa1027600:CDS
TTAGTGCAGCAACCTCAGTT+TGG 0.483693 7_1:-60069135 Msa1027600:CDS
ACGAGAAGCTTAGAAGTGAA+TGG 0.489778 7_1:-60069072 Msa1027600:CDS
TATGTTGCGCTTCTTCCGTC+GGG 0.492269 7_1:-60067625 Msa1027600:CDS
CAAATTGGATGCAGGGAATG+TGG 0.492429 7_1:-60069224 Msa1027600:CDS
TGGATTAGAAGTGTTGAAAG+TGG 0.496742 7_1:-60072769 Msa1027600:CDS
GATGATCCGGGTGAGCCACC+GGG 0.500082 7_1:-60069166 Msa1027600:CDS
CGCGGTGGAATCAGTGGAAA+CGG 0.501703 7_1:-60067470 Msa1027600:CDS
AAATGGAACAAATTGGATGC+AGG 0.503062 7_1:-60069232 Msa1027600:CDS
ATACCTGAGTGTTCTCTAGC+GGG 0.506667 7_1:+60069476 None:intergenic
CTAGACATTCACATTGGCGT+TGG 0.506942 7_1:+60069522 None:intergenic
ATGCCAAAATCTTGACCTAA+AGG 0.510136 7_1:+60072952 None:intergenic
CCTCCTACAGTTAAGAAAAG+TGG 0.511269 7_1:+60071745 None:intergenic
TGCAGAAGGGGTATGGGCAG+TGG 0.512805 7_1:-60071813 Msa1027600:CDS
ACTTCAAGTACTTTCTCCAT+TGG 0.513136 7_1:-60071879 Msa1027600:CDS
ACGACTGCAGGAAATGTTGA+TGG 0.513579 7_1:-60067238 Msa1027600:three_prime_UTR
CGAGAAGCTTAGAAGTGAAT+GGG 0.514863 7_1:-60069071 Msa1027600:CDS
GGTGGAGCATGCAGAATATG+AGG 0.519622 7_1:-60069624 Msa1027600:CDS
TGCAGGAAATGTTGATGGTA+GGG 0.519732 7_1:-60067233 Msa1027600:three_prime_UTR
CTCTTGCATTGGACCACCGT+TGG 0.519987 7_1:+60069039 None:intergenic
TGCATTGCAGGAATATCTAC+AGG 0.520921 7_1:+60067676 None:intergenic
AATCCAATGTGTTCAAATTG+TGG 0.530145 7_1:-60073168 Msa1027600:CDS
CCTCCACAATTTGAACACAT+TGG 0.531110 7_1:+60073165 None:intergenic
ACCACCATTATCACGACTGC+AGG 0.532796 7_1:-60067250 Msa1027600:three_prime_UTR
ACTAGATATCACTTCAGTTG+TGG 0.533585 7_1:+60072091 None:intergenic
CTGCAGGAAATGTTGATGGT+AGG 0.533636 7_1:-60067234 Msa1027600:three_prime_UTR
GAGGCTTCCTTCTGGTTGTG+TGG 0.534040 7_1:-60071726 Msa1027600:CDS
TTCTAAGCTTCTCGTTGCGA+AGG 0.534552 7_1:+60069080 None:intergenic
ACCCTTGCTAAGCTTAGGCA+TGG 0.536023 7_1:-60069576 Msa1027600:CDS
CACCGTCGATGCACAAACTC+CGG 0.536497 7_1:+60069258 None:intergenic
CTCCTACAGTTAAGAAAAGT+GGG 0.539174 7_1:+60071746 None:intergenic
AGGAAGAGTGTGGATGATCC+GGG 0.542002 7_1:-60069178 Msa1027600:CDS
TCTGAGGCTTCTAGAGAAAG+TGG 0.543217 7_1:-60072667 Msa1027600:CDS
TCAAGTTCTTGAATTTGTTG+AGG 0.544285 7_1:+60073743 None:intergenic
AACATGGATTTAACCAAAGT+AGG 0.544723 7_1:+60074104 None:intergenic
AAATAGAAGAACACAAATGA+AGG 0.546022 7_1:-60073526 Msa1027600:intron
GCAGCATGCAGAAGGGGTAT+GGG 0.548640 7_1:-60071819 Msa1027600:CDS
CAGATCTGGTAGTGATAACA+TGG 0.549386 7_1:-60073837 Msa1027600:CDS
TGCCGGAGTTTGTGCATCGA+CGG 0.549484 7_1:-60069260 Msa1027600:CDS
CCCTTGCTAAGCTTAGGCAT+GGG 0.551648 7_1:-60069575 Msa1027600:CDS
TCCATTGGTTCCTGTTCGTG+AGG 0.554096 7_1:-60071864 Msa1027600:CDS
GGTAATGACAAGGAAGAGTG+TGG 0.554273 7_1:-60069188 Msa1027600:CDS
AGAAACAAACACAGACGCAT+CGG 0.554548 7_1:-60067719 Msa1027600:CDS
ATGTGAGCCATCTCTTGCAT+TGG 0.555705 7_1:+60069028 None:intergenic
TGCATACACTAGCTCGTAGG+AGG 0.558654 7_1:+60068972 None:intergenic
ACATTCACATTGGCGTTGGA+GGG 0.559350 7_1:+60069526 None:intergenic
TCAACACTTCTAATCCAAAG+AGG 0.561610 7_1:+60072775 None:intergenic
GGGTCGCAGCGGAGAGCGAG+TGG 0.562161 7_1:-60067550 Msa1027600:CDS
AAATTGGATGCAGGGAATGT+GGG 0.562535 7_1:-60069223 Msa1027600:CDS
TACAAAATACAAACTCAAAG+TGG 0.564412 7_1:+60067354 None:intergenic
AACATATGATGCAGGTGACA+TGG 0.564953 7_1:-60069646 Msa1027600:intron
TTAGCAAGGGTCTATAGAGC+TGG 0.566123 7_1:+60069588 None:intergenic
TGTTGTTATCATAAACAGCT+TGG 0.566826 7_1:-60072644 Msa1027600:CDS
ACCCATGCCTAAGCTTAGCA+AGG 0.568460 7_1:+60069574 None:intergenic
AGGTTCTTCATACATAAGTA+GGG 0.570039 7_1:+60074233 None:intergenic
ACCTCACGAACAGGAACCAA+TGG 0.570995 7_1:+60071863 None:intergenic
ACCATCAGAGAAGCTTCAGC+TGG 0.571588 7_1:-60071773 Msa1027600:CDS
AGCAAATATCTGCAGTCACA+CGG 0.572524 7_1:-60067300 Msa1027600:three_prime_UTR
GTAACAAATACTAATAGTAA+TGG 0.574242 7_1:-60072886 Msa1027600:CDS
CTGTTGTATAACAGAATCGA+TGG 0.574417 7_1:-60072148 Msa1027600:intron
GAGCTTCTTGCAATCACACA+AGG 0.574571 7_1:+60072113 None:intergenic
CGGTGGTCCAATGCAAGAGA+TGG 0.575553 7_1:-60069035 Msa1027600:CDS
GGTTTCGCCGTGTTACCAGA+TGG 0.577544 7_1:-60067604 Msa1027600:CDS
GGATGCAGGGAATGTGGGCG+AGG 0.578994 7_1:-60069218 Msa1027600:CDS
AATGGAACAAATTGGATGCA+GGG 0.583192 7_1:-60069231 Msa1027600:CDS
AATGGATGAGTTAGTGAAGA+TGG 0.583650 7_1:-60072812 Msa1027600:CDS
GGAGTGGTAATCACGATGAC+GGG 0.588681 7_1:-60067570 Msa1027600:CDS
TAGCAATAAGTGCAGGAGGA+AGG 0.588813 7_1:-60069327 Msa1027600:CDS
GAGTGATGATGACATTAAGA+TGG 0.589154 7_1:+60069499 None:intergenic
TACCAGATGGACATAGCGAC+GGG 0.591264 7_1:-60067591 Msa1027600:CDS
GCTGCACTAAGCACAATCCC+CGG 0.592750 7_1:+60069148 None:intergenic
AAACAAATAATGGTTTGAGA+AGG 0.592932 7_1:-60073889 Msa1027600:CDS
ACAACTGAAGTGATATCTAG+TGG 0.593868 7_1:-60072089 Msa1027600:CDS
CTATGTGTAGCAATAAGTGC+AGG 0.597052 7_1:-60069334 Msa1027600:intron
TTGCAAGCAGCATGCAGAAG+GGG 0.600217 7_1:-60071825 Msa1027600:CDS
ACCAGCTGAAGCTTCTCTGA+TGG 0.600752 7_1:+60071772 None:intergenic
GTGGTTCAAGATATGCCAAA+TGG 0.603358 7_1:-60071707 Msa1027600:CDS
TTAATCATGAGGAATATACA+AGG 0.603991 7_1:-60072735 Msa1027600:CDS
GATGGACATAGCGACGGGAG+TGG 0.607388 7_1:-60067586 Msa1027600:CDS
GTTCCTCTTGTAATTGAAGG+TGG 0.608032 7_1:+60072916 None:intergenic
TCACCACCTTCAATTACAAG+AGG 0.610841 7_1:-60072919 Msa1027600:CDS
GGAGGGAGACACAGTTGCCA+TGG 0.612613 7_1:+60068990 None:intergenic
CCCATGCCTAAGCTTAGCAA+GGG 0.614032 7_1:+60069575 None:intergenic
GAATTTGTTGAGGAGTGTGT+CGG 0.614112 7_1:+60073753 None:intergenic
GTCACGAGAATTCACTACTT+AGG 0.625972 7_1:-60073245 Msa1027600:CDS
TCTGGTAGTGATAACATGGA+TGG 0.630519 7_1:-60073833 Msa1027600:CDS
GGGAGTGGTAATCACGATGA+CGG 0.631663 7_1:-60067571 Msa1027600:CDS
TGCCGGCAAGTGTACAAACT+CGG 0.632620 7_1:+60073064 None:intergenic
TTTGCAAGCAGCATGCAGAA+GGG 0.633056 7_1:-60071826 Msa1027600:CDS
TAAACCAGATGAGTTGAACA+TGG 0.634149 7_1:+60074088 None:intergenic
AAAGCTCGCGGTGGAATCAG+TGG 0.637664 7_1:-60067476 Msa1027600:CDS
TCCACCGCGAGCTTTGCCGT+CGG 0.643177 7_1:+60067484 None:intergenic
TCTTGAACCACACAACCAGA+AGG 0.644378 7_1:+60071719 None:intergenic
GCAATGCATGTAGTAATGAA+CGG 0.644467 7_1:-60067661 Msa1027600:CDS
CCAATGTGTTCAAATTGTGG+AGG 0.649005 7_1:-60073165 Msa1027600:CDS
TCTACCGACGGCAAAGCTCG+CGG 0.650364 7_1:-60067488 Msa1027600:CDS
TTGGTAACGACGTAATTGGA+CGG 0.652910 7_1:+60073031 None:intergenic
ATATGCATACACTAGCTCGT+AGG 0.653193 7_1:+60068969 None:intergenic
TATAGACCCTTGCTAAGCTT+AGG 0.654709 7_1:-60069581 Msa1027600:CDS
ACATATGATGCAGGTGACAT+GGG 0.655326 7_1:-60069645 Msa1027600:intron
GCATACACTAGCTCGTAGGA+GGG 0.655354 7_1:+60068973 None:intergenic
GAGATGGCTCACATTGCCAA+AGG 0.656074 7_1:-60069019 Msa1027600:CDS
ATCACGATGACGGGTCGCAG+CGG 0.657275 7_1:-60067561 Msa1027600:CDS
GGTAACACGGCGAAACCCGA+CGG 0.657528 7_1:+60067610 None:intergenic
AGATGGCTAGACATTCACAT+TGG 0.658957 7_1:+60069516 None:intergenic
TTACCAGATGGACATAGCGA+CGG 0.660884 7_1:-60067592 Msa1027600:CDS
TGTGTAGCAATAAGTGCAGG+AGG 0.662801 7_1:-60069331 Msa1027600:intron
TATACCTGAGTGTTCTCTAG+CGG 0.665145 7_1:+60069475 None:intergenic
TGTCAATAAGAGAAGCAATG+AGG 0.665809 7_1:-60073191 Msa1027600:CDS
ACCGACGGCAAAGCTCGCGG+TGG 0.666727 7_1:-60067485 Msa1027600:CDS
GCTATGTCCATCTGGTAACA+CGG 0.669438 7_1:+60067597 None:intergenic
ATGATCCGGGTGAGCCACCG+GGG 0.670578 7_1:-60069165 Msa1027600:CDS
TACCTGAGTGTTCTCTAGCG+GGG 0.673914 7_1:+60069477 None:intergenic
GAATGGGACATACTCTCCAA+CGG 0.674539 7_1:-60069055 Msa1027600:CDS
AAACAAACACAGACGCATCG+GGG 0.676878 7_1:-60067717 Msa1027600:CDS
TGGGACATACTCTCCAACGG+TGG 0.676947 7_1:-60069052 Msa1027600:CDS
ACTTGTGAACAGTCTACCGA+CGG 0.682561 7_1:-60067500 Msa1027600:CDS
TATGATGCAGGTGACATGGG+TGG 0.686232 7_1:-60069642 Msa1027600:intron
CAAACAAATATAGAAGCACA+AGG 0.687269 7_1:-60073950 Msa1027600:CDS
TCCTGCAGTCGTGATAATGG+TGG 0.690550 7_1:+60067249 None:intergenic
ATTGCCAAAGGACATGACCA+TGG 0.701545 7_1:-60069007 Msa1027600:CDS
GCACTAAGCACAATCCCCGG+TGG 0.713315 7_1:+60069151 None:intergenic
AGCTTCTTGCAATCACACAA+GGG 0.721070 7_1:+60072114 None:intergenic
AGGACGTTAGGGTAATGACA+AGG 0.727528 7_1:-60069198 Msa1027600:CDS
TGAAGCGGGTAGCCAAACTG+AGG 0.731803 7_1:+60069123 None:intergenic
CTCCCCGCTAGAGAACACTC+AGG 0.744703 7_1:-60069479 Msa1027600:intron
ACAAATATAGAAGCACAAGG+TGG 0.748500 7_1:-60073947 Msa1027600:CDS
AAAGTAGGAGTTGATAAACG+AGG 0.750797 7_1:+60074119 None:intergenic
ATGCATGTAGTAATGAACGG+CGG 0.775511 7_1:-60067658 Msa1027600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTTATAAAAAATAATTGTT+TGG - chr7_1:60067856-60067875 Msa1027600:intron 10.0%
!! ATAAATTTAGAAACAAAAAA+TGG - chr7_1:60068140-60068159 Msa1027600:intron 10.0%
!!! TTTATTTTTTTCATTTTACT+TGG - chr7_1:60069012-60069031 Msa1027600:CDS 10.0%
!!! AATTTTTTATATACATCTAT+TGG + chr7_1:60069914-60069933 None:intergenic 10.0%
!!! TTTATTTATTTATTTCAAGT+TGG - chr7_1:60070301-60070320 Msa1027600:intron 10.0%
!! CATTATAAAATTAATAACAT+GGG + chr7_1:60070514-60070533 None:intergenic 10.0%
!!! CATGTTATTAATTTTATAAT+GGG - chr7_1:60070513-60070532 Msa1027600:intron 10.0%
!! CAACAAATTAATTATTTAAA+AGG + chr7_1:60070896-60070915 None:intergenic 10.0%
!! TAATAAAAAACACTTAATTA+TGG + chr7_1:60072687-60072706 None:intergenic 10.0%
!!! TTTTGTCTTTTATATTTTGT+AGG - chr7_1:60067880-60067899 Msa1027600:intron 15.0%
!! AAAAAAATAAAATTAGAGAC+CGG + chr7_1:60068172-60068191 None:intergenic 15.0%
!!! AAAAGAAATTTTTAATCATG+AGG - chr7_1:60068778-60068797 Msa1027600:intron 15.0%
!!! TTGCAAATATAATTTTTTAG+TGG - chr7_1:60069298-60069317 Msa1027600:CDS 15.0%
!! CTAAAACATTATAGTATTAA+TGG + chr7_1:60069538-60069557 None:intergenic 15.0%
!!! TTTAAAGTGATGAAAATAAA+AGG + chr7_1:60069564-60069583 None:intergenic 15.0%
!!! TTTATTACTTTTTGGAATTT+GGG + chr7_1:60070172-60070191 None:intergenic 15.0%
!!! AATTTTTGTAATCTATGTAA+AGG - chr7_1:60070225-60070244 Msa1027600:intron 15.0%
!! CCATTATAAAATTAATAACA+TGG + chr7_1:60070515-60070534 None:intergenic 15.0%
!!! CCATGTTATTAATTTTATAA+TGG - chr7_1:60070512-60070531 Msa1027600:intron 15.0%
!! TAACTCTTATAAAACATAAA+AGG + chr7_1:60070610-60070629 None:intergenic 15.0%
!! GTTATATAATATATTCAATG+TGG - chr7_1:60071064-60071083 Msa1027600:intron 15.0%
!!! TAATCAAGTGTTTTAAAAAA+TGG - chr7_1:60072710-60072729 Msa1027600:CDS 15.0%
!! AATTTGAGCTATTTATTTAT+GGG - chr7_1:60072934-60072953 Msa1027600:CDS 15.0%
!!! CAATTTAGAAAGTTTTTTTT+TGG + chr7_1:60073123-60073142 None:intergenic 15.0%
!! AATTGAAATTTAGAAATGAA+TGG - chr7_1:60073138-60073157 Msa1027600:CDS 15.0%
!!! TTTTCTAAACATCAAAATTT+AGG + chr7_1:60073439-60073458 None:intergenic 15.0%
!!! TTTTTTATGTTCTTCTTGTT+TGG - chr7_1:60067529-60067548 Msa1027600:CDS 20.0%
!!! TTTTTATGTTCTTCTTGTTT+GGG - chr7_1:60067530-60067549 Msa1027600:CDS 20.0%
!! AATTTCCATCAAACAAATAA+TGG - chr7_1:60067625-60067644 Msa1027600:CDS 20.0%
!!! AACTTTTTTTTTCTTCTTCT+AGG + chr7_1:60068109-60068128 None:intergenic 20.0%
!! AAACAAAAAATGGTAAAAAC+CGG - chr7_1:60068150-60068169 Msa1027600:intron 20.0%
!!! AGTTTAGAAATTGGTTTTAA+TGG - chr7_1:60068521-60068540 Msa1027600:intron 20.0%
!! GTAACAAATACTAATAGTAA+TGG - chr7_1:60068638-60068657 Msa1027600:intron 20.0%
!! CATGAGATAATTGTAAATAT+TGG + chr7_1:60069128-60069147 None:intergenic 20.0%
!!! GCATCATGTATTTTATAAAA+GGG + chr7_1:60069887-60069906 None:intergenic 20.0%
!!! TGCATCATGTATTTTATAAA+AGG + chr7_1:60069888-60069907 None:intergenic 20.0%
!! AGAGATGAAAAATACAAAAT+TGG + chr7_1:60070070-60070089 None:intergenic 20.0%
!!! CTTTATTACTTTTTGGAATT+TGG + chr7_1:60070173-60070192 None:intergenic 20.0%
!! CAAATTCCAAAAAGTAATAA+AGG - chr7_1:60070171-60070190 Msa1027600:intron 20.0%
!! CATAGATTACAAAAATTATC+AGG + chr7_1:60070222-60070241 None:intergenic 20.0%
!!! ATTGAGCAATATTTTAAAGT+TGG - chr7_1:60070353-60070372 Msa1027600:intron 20.0%
!!! TTGAGCAATATTTTAAAGTT+GGG - chr7_1:60070354-60070373 Msa1027600:intron 20.0%
!! TTGAGAGACTAATTATAAAA+GGG + chr7_1:60070708-60070727 None:intergenic 20.0%
!! TTTGAGAGACTAATTATAAA+AGG + chr7_1:60070709-60070728 None:intergenic 20.0%
!! TGAATCCATTAATTTAATCA+TGG - chr7_1:60070818-60070837 Msa1027600:intron 20.0%
!! CAAGTACATACATAAAATAA+TGG + chr7_1:60071250-60071269 None:intergenic 20.0%
!! TTGCCAAATTATAGTATATA+TGG - chr7_1:60071480-60071499 Msa1027600:intron 20.0%
!! TGCCAAATTATAGTATATAT+GGG - chr7_1:60071481-60071500 Msa1027600:intron 20.0%
!! TAATAACTCGATTATTTAGA+AGG - chr7_1:60071584-60071603 Msa1027600:intron 20.0%
!! TTAGACTATGAAATTTGTAA+CGG - chr7_1:60071630-60071649 Msa1027600:intron 20.0%
!! TAATGGTATAACTAATAACA+TGG - chr7_1:60071843-60071862 Msa1027600:CDS 20.0%
!! TAAGAAAATGATATTGAAGA+TGG + chr7_1:60072585-60072604 None:intergenic 20.0%
!! ACTTAATTATGGTATTAGTT+TGG + chr7_1:60072676-60072695 None:intergenic 20.0%
!! AATTGAATCATATTTCACTA+TGG + chr7_1:60072918-60072937 None:intergenic 20.0%
!! CAATTTGAGCTATTTATTTA+TGG - chr7_1:60072933-60072952 Msa1027600:CDS 20.0%
!!! CAATGTAAATATACTACTTT+TGG + chr7_1:60072999-60073018 None:intergenic 20.0%
!!! AAATTTAGGTTAAAAGAATG+AGG + chr7_1:60073425-60073444 None:intergenic 20.0%
!! GAAAAAGAAAACAAAAAATG+TGG - chr7_1:60073454-60073473 Msa1027600:intron 20.0%
!!! TTTGATTTTCAAAGTTTTGT+TGG + chr7_1:60073702-60073721 None:intergenic 20.0%
!! TATGTATGAAGAACCTTTTA+TGG - chr7_1:60067298-60067317 Msa1027600:three_prime_UTR 25.0%
!! TTTTAATCAAGCACCATAAA+AGG + chr7_1:60067314-60067333 None:intergenic 25.0%
!! ATTTCTACTTTGATGAGTTT+TGG - chr7_1:60067341-60067360 Msa1027600:three_prime_UTR 25.0%
! TCAAACCATTATTTGTTTGA+TGG + chr7_1:60067633-60067652 None:intergenic 25.0%
! AAACAAATAATGGTTTGAGA+AGG - chr7_1:60067635-60067654 Msa1027600:CDS 25.0%
!! TCATTTGTGTTCTTCTATTT+TGG + chr7_1:60067998-60068017 None:intergenic 25.0%
! AAATAGAAGAACACAAATGA+AGG - chr7_1:60067998-60068017 Msa1027600:intron 25.0%
!!! ACTTTTGGAAAGTGTTTTTT+TGG + chr7_1:60068027-60068046 None:intergenic 25.0%
!! GGAATAGTATCTTTTTCTTT+TGG - chr7_1:60068061-60068080 Msa1027600:intron 25.0%
!! TGGAGTTCAATATTTTCATA+CGG - chr7_1:60068081-60068100 Msa1027600:intron 25.0%
! TTGATTATATCAGACTCAAT+TGG - chr7_1:60068253-60068272 Msa1027600:intron 25.0%
! AATTACAAGAGGAACAAATA+TGG - chr7_1:60068616-60068635 Msa1027600:intron 25.0%
!!! TAATGGTTTTGATAGATCAA+TGG - chr7_1:60068655-60068674 Msa1027600:intron 25.0%
! TTAATCATGAGGAATATACA+AGG - chr7_1:60068789-60068808 Msa1027600:intron 25.0%
! ATTATTAGTACTCCTTGTAT+TGG - chr7_1:60068812-60068831 Msa1027600:intron 25.0%
!!! TTTGGTTTTAAACCAATACA+AGG + chr7_1:60068827-60068846 None:intergenic 25.0%
!!! TGTATTGGTTTAAAACCAAA+TGG - chr7_1:60068827-60068846 Msa1027600:intron 25.0%
! TTGAATGAAGTAGTTGAAAA+AGG + chr7_1:60068937-60068956 None:intergenic 25.0%
!!! GTTTAATTTGAACTATGTCA+TGG - chr7_1:60069147-60069166 Msa1027600:CDS 25.0%
!!! TAACATTGGTTTACATGTTA+GGG - chr7_1:60070028-60070047 Msa1027600:intron 25.0%
!!! GTGAATCCTTTATTACTTTT+TGG + chr7_1:60070180-60070199 None:intergenic 25.0%
!!! TGAGCAATATTTTAAAGTTG+GGG - chr7_1:60070355-60070374 Msa1027600:intron 25.0%
!!! TGATTTTTTAACCAATGATC+CGG - chr7_1:60070664-60070683 Msa1027600:intron 25.0%
! TATAAAAGGGTAATGTTAAC+CGG + chr7_1:60070695-60070714 None:intergenic 25.0%
! GACTTCCATGATTAAATTAA+TGG + chr7_1:60070826-60070845 None:intergenic 25.0%
! TGAACCCTATAAAAACATAT+AGG - chr7_1:60071038-60071057 Msa1027600:intron 25.0%
!!! CTGACCTATATGTTTTTATA+GGG + chr7_1:60071045-60071064 None:intergenic 25.0%
!!! ACTGACCTATATGTTTTTAT+AGG + chr7_1:60071046-60071065 None:intergenic 25.0%
! GTCTATTATCTTGATTCAAA+GGG + chr7_1:60071091-60071110 None:intergenic 25.0%
! AGTCTATTATCTTGATTCAA+AGG + chr7_1:60071092-60071111 None:intergenic 25.0%
!!! TCTTTTTGCTATAAGTGTTT+GGG - chr7_1:60071122-60071141 Msa1027600:intron 25.0%
! TTGATTATGATCATGATTCA+TGG + chr7_1:60071366-60071385 None:intergenic 25.0%
! AGCCCATATATACTATAATT+TGG + chr7_1:60071486-60071505 None:intergenic 25.0%
! CAAACATAACTACTAATTTC+AGG - chr7_1:60071555-60071574 Msa1027600:intron 25.0%
!! CATAGTCTAAGCTTTAATAA+TGG + chr7_1:60071620-60071639 None:intergenic 25.0%
! AATAGCTAACAATTATGTTG+TGG - chr7_1:60071731-60071750 Msa1027600:CDS 25.0%
!! TATTTCACTATGGTAATGTT+CGG + chr7_1:60072908-60072927 None:intergenic 25.0%
! ATAAACATTGCATTGGAAAA+TGG + chr7_1:60073070-60073089 None:intergenic 25.0%
! ATCATGTATAAACATTGCAT+TGG + chr7_1:60073077-60073096 None:intergenic 25.0%
! ATGAAAAGGTAAAATTGAGA+AGG - chr7_1:60073258-60073277 Msa1027600:CDS 25.0%
! AGACAATTTGTAACAGAAAT+AGG - chr7_1:60073313-60073332 Msa1027600:intron 25.0%
! GACAATTTGTAACAGAAATA+GGG - chr7_1:60073314-60073333 Msa1027600:intron 25.0%
!!! AGTTTCAGATTTTGACTTTT+TGG + chr7_1:60073364-60073383 None:intergenic 25.0%
!!! GTCTTTTTCGTTAAGTTTTA+GGG + chr7_1:60073512-60073531 None:intergenic 25.0%
!!! TGTCTTTTTCGTTAAGTTTT+AGG + chr7_1:60073513-60073532 None:intergenic 25.0%
!!! GTTTTTTTTTTTCTTGTTGC+AGG - chr7_1:60073745-60073764 Msa1027600:CDS 25.0%
! TACAAAATACAAACTCAAAG+TGG + chr7_1:60074173-60074192 None:intergenic 25.0%
AGGTTCTTCATACATAAGTA+GGG + chr7_1:60067294-60067313 None:intergenic 30.0%
AAGGTTCTTCATACATAAGT+AGG + chr7_1:60067295-60067314 None:intergenic 30.0%
AACATGGATTTAACCAAAGT+AGG + chr7_1:60067423-60067442 None:intergenic 30.0%
! CAAACAAATATAGAAGCACA+AGG - chr7_1:60067574-60067593 Msa1027600:CDS 30.0%
TGGTGATATGAAGAGATTAA+TGG - chr7_1:60067597-60067616 Msa1027600:CDS 30.0%
!!! TTTTTTTCTTGGTGGATTGT+CGG + chr7_1:60067743-60067762 None:intergenic 30.0%
!!! TGATAACGTTTTTTTCTTGG+TGG + chr7_1:60067751-60067770 None:intergenic 30.0%
!! TCAAGTTCTTGAATTTGTTG+AGG + chr7_1:60067784-60067803 None:intergenic 30.0%
!!! TCAAGTCTTTGTTTTTCATC+AGG + chr7_1:60067927-60067946 None:intergenic 30.0%
AAAGACTTGAACTTAGCAAA+AGG - chr7_1:60067937-60067956 Msa1027600:intron 30.0%
! AAACAAGACAAGTCAAGTTT+TGG - chr7_1:60067970-60067989 Msa1027600:intron 30.0%
! CATGTGAATACAAAGACTTT+TGG + chr7_1:60068042-60068061 None:intergenic 30.0%
CAAAAGTCTTTGTATTCACA+TGG - chr7_1:60068040-60068059 Msa1027600:intron 30.0%
AATCCAATGTGTTCAAATTG+TGG - chr7_1:60068356-60068375 Msa1027600:intron 30.0%
TTTGTTCCTCTTGTAATTGA+AGG + chr7_1:60068614-60068633 None:intergenic 30.0%
! TATGTTTCTTGAACTTGCTT+TGG - chr7_1:60068685-60068704 Msa1027600:intron 30.0%
TGTTGTTATCATAAACAGCT+TGG - chr7_1:60068880-60068899 Msa1027600:intron 30.0%
TAATTTGAACTATGTCATGG+AGG - chr7_1:60069150-60069169 Msa1027600:CDS 30.0%
GTGATATCTAGTGGAATAAA+TGG - chr7_1:60069444-60069463 Msa1027600:intron 30.0%
ATTACCTTAGAGTAACCATT+TGG + chr7_1:60069835-60069854 None:intergenic 30.0%
! GCAAAATTAGCTTCTAACAT+TGG - chr7_1:60070014-60070033 Msa1027600:intron 30.0%
!! CTAACATTGGTTTACATGTT+AGG - chr7_1:60070027-60070046 Msa1027600:intron 30.0%
!!! TTACTTTTTGGAATTTGGGA+AGG + chr7_1:60070168-60070187 None:intergenic 30.0%
GTGTACAAGTAATTGAAACA+TGG - chr7_1:60070323-60070342 Msa1027600:intron 30.0%
!!! CAATATTTTAAAGTTGGGGA+GGG - chr7_1:60070359-60070378 Msa1027600:intron 30.0%
!!! AATATTTTAAAGTTGGGGAG+GGG - chr7_1:60070360-60070379 Msa1027600:intron 30.0%
!!! GATTTTTTAACCAATGATCC+GGG - chr7_1:60070665-60070684 Msa1027600:intron 30.0%
! AGTCTCCATCACTTAAATTT+TGG - chr7_1:60070842-60070861 Msa1027600:intron 30.0%
AGCTACCAAAATTTAAGTGA+TGG + chr7_1:60070850-60070869 None:intergenic 30.0%
! TTTTTATAGGGTTCAAAACC+AGG + chr7_1:60071033-60071052 None:intergenic 30.0%
!! GTCTTTTTGCTATAAGTGTT+TGG - chr7_1:60071121-60071140 Msa1027600:intron 30.0%
!!! ATTTGCTATATTTTGCAGTG+TGG + chr7_1:60071157-60071176 None:intergenic 30.0%
TACTAGATAAAGTCATCATC+CGG + chr7_1:60071224-60071243 None:intergenic 30.0%
CAAGTATGAACAGAAAATCT+TGG + chr7_1:60071332-60071351 None:intergenic 30.0%
!! TATGAAATTTGTAACGGACT+TGG - chr7_1:60071636-60071655 Msa1027600:intron 30.0%
TACAATAAACTTCGCAAAGT+TGG - chr7_1:60071787-60071806 Msa1027600:CDS 30.0%
ACAATAAACTTCGCAAAGTT+GGG - chr7_1:60071788-60071807 Msa1027600:CDS 30.0%
AAGTTGGGATTTCATGAATA+TGG - chr7_1:60071803-60071822 Msa1027600:CDS 30.0%
TTTACATGAACATATGATGC+AGG - chr7_1:60071870-60071889 Msa1027600:CDS 30.0%
! TTTTGTTAAATGTGTGTGTC+TGG + chr7_1:60072135-60072154 None:intergenic 30.0%
CACAAAAGTTGTTTGTCATT+CGG + chr7_1:60072246-60072265 None:intergenic 30.0%
! AGGAAATCAAAGACTTTTTG+TGG + chr7_1:60072427-60072446 None:intergenic 30.0%
AAACAAAAAATGTGGTACCA+AGG - chr7_1:60073462-60073481 Msa1027600:intron 30.0%
!!! TTTTCGTTAAGTTTTAGGGT+TGG + chr7_1:60073508-60073527 None:intergenic 30.0%
AATTCAGTTTCGTAGTTATG+AGG - chr7_1:60074314-60074333 Msa1027600:five_prime_UTR 30.0%
!! AAAGTAGGAGTTGATAAACG+AGG + chr7_1:60067408-60067427 None:intergenic 35.0%
TCGTTTATCAACTCCTACTT+TGG - chr7_1:60067407-60067426 Msa1027600:exon 35.0%
AAATCCATGTTCAACTCATC+TGG - chr7_1:60067432-60067451 Msa1027600:CDS 35.0%
! TAAACCAGATGAGTTGAACA+TGG + chr7_1:60067439-60067458 None:intergenic 35.0%
! ACAAATATAGAAGCACAAGG+TGG - chr7_1:60067577-60067596 Msa1027600:CDS 35.0%
GATAACATGGATGGTATTTC+TGG - chr7_1:60067700-60067719 Msa1027600:CDS 35.0%
!!! CGGTGATAACGTTTTTTTCT+TGG + chr7_1:60067754-60067773 None:intergenic 35.0%
!!! CTTTGTTTTTCATCAGGATG+AGG + chr7_1:60067921-60067940 None:intergenic 35.0%
!! ACTTAGCAAAAGGCTTTGTT+TGG - chr7_1:60067947-60067966 Msa1027600:intron 35.0%
TGTCAATAAGAGAAGCAATG+AGG - chr7_1:60068333-60068352 Msa1027600:intron 35.0%
CCAATTTCTAAACTCGAGTT+TGG + chr7_1:60068515-60068534 None:intergenic 35.0%
CCAAACTCGAGTTTAGAAAT+TGG - chr7_1:60068512-60068531 Msa1027600:intron 35.0%
! ATGCCTTTAGGTCAAGATTT+TGG - chr7_1:60068569-60068588 Msa1027600:intron 35.0%
ATGCCAAAATCTTGACCTAA+AGG + chr7_1:60068575-60068594 None:intergenic 35.0%
!! TTTAGGTCAAGATTTTGGCA+TGG - chr7_1:60068574-60068593 Msa1027600:intron 35.0%
!! GTTTTGATAGATCAATGGAG+AGG - chr7_1:60068660-60068679 Msa1027600:intron 35.0%
AATGGATGAGTTAGTGAAGA+TGG - chr7_1:60068712-60068731 Msa1027600:intron 35.0%
TCAACACTTCTAATCCAAAG+AGG + chr7_1:60068752-60068771 None:intergenic 35.0%
!! TGGATTAGAAGTGTTGAAAG+TGG - chr7_1:60068755-60068774 Msa1027600:intron 35.0%
!!! ACCAAATGGTTTTGTTTCTG+AGG - chr7_1:60068841-60068860 Msa1027600:intron 35.0%
GGCTCTTGTTGAAACTTTAA+TGG - chr7_1:60068901-60068920 Msa1027600:intron 35.0%
! CTTAGCCTTTCAATCATTCT+TGG - chr7_1:60068975-60068994 Msa1027600:intron 35.0%
CTAAGCCAAGAATGATTGAA+AGG + chr7_1:60068983-60069002 None:intergenic 35.0%
CTTTCAATCATTCTTGGCTT+AGG - chr7_1:60068981-60069000 Msa1027600:CDS 35.0%
CTGTTGTATAACAGAATCGA+TGG - chr7_1:60069376-60069395 Msa1027600:intron 35.0%
ACTAGATATCACTTCAGTTG+TGG + chr7_1:60069436-60069455 None:intergenic 35.0%
ACAACTGAAGTGATATCTAG+TGG - chr7_1:60069435-60069454 Msa1027600:intron 35.0%
GGAATAAATGGAACCAGAAA+TGG - chr7_1:60069456-60069475 Msa1027600:intron 35.0%
ACTTCAAGTACTTTCTCCAT+TGG - chr7_1:60069645-60069664 Msa1027600:intron 35.0%
CTCCTACAGTTAAGAAAAGT+GGG + chr7_1:60069781-60069800 None:intergenic 35.0%
TATGCCAAATGGTTACTCTA+AGG - chr7_1:60069828-60069847 Msa1027600:intron 35.0%
AAACAGTCGAGATAGTAGTA+CGG + chr7_1:60070267-60070286 None:intergenic 35.0%
!!! GCAATATTTTAAAGTTGGGG+AGG - chr7_1:60070358-60070377 Msa1027600:intron 35.0%
!!! ATATTTTAAAGTTGGGGAGG+GGG - chr7_1:60070361-60070380 Msa1027600:intron 35.0%
AACACAAAGCTAAGGAATCA+TGG - chr7_1:60070386-60070405 Msa1027600:intron 35.0%
ATGAGCTTTCTAAGTTGCTT+GGG + chr7_1:60070424-60070443 None:intergenic 35.0%
! TTTTGTGATAGACACAAGAG+AGG + chr7_1:60070756-60070775 None:intergenic 35.0%
AGTGATGAACACATCAATGT+AGG - chr7_1:60070784-60070803 Msa1027600:intron 35.0%
CATCAATGTAGGTGAAATCT+AGG - chr7_1:60070795-60070814 Msa1027600:intron 35.0%
ACTAGATAAAGTCATCATCC+GGG + chr7_1:60071223-60071242 None:intergenic 35.0%
CTGTTCATACTTGTACATCA+TGG - chr7_1:60071339-60071358 Msa1027600:intron 35.0%
ATCATTCACACATGTTGAAC+AGG + chr7_1:60071407-60071426 None:intergenic 35.0%
CGATGTGTTTCACAAGATTA+CGG + chr7_1:60071529-60071548 None:intergenic 35.0%
GATTATTTAGAAGGATGCGT+CGG - chr7_1:60071593-60071612 Msa1027600:intron 35.0%
TGGGATTTCATGAATATGGT+AGG - chr7_1:60071807-60071826 Msa1027600:CDS 35.0%
ATATGGTAGGAAAATGAGCA+TGG - chr7_1:60071820-60071839 Msa1027600:CDS 35.0%
TAGGAAAATGAGCATGGTAA+TGG - chr7_1:60071826-60071845 Msa1027600:CDS 35.0%
! GAGTGATGATGACATTAAGA+TGG + chr7_1:60072028-60072047 None:intergenic 35.0%
TATTTGTCCACAATAACCCA+CGG - chr7_1:60072157-60072176 Msa1027600:intron 35.0%
! ATGACAAACAACTTTTGTGC+CGG - chr7_1:60072247-60072266 Msa1027600:intron 35.0%
AAATGGAACAAATTGGATGC+AGG - chr7_1:60072292-60072311 Msa1027600:intron 35.0%
AATGGAACAAATTGGATGCA+GGG - chr7_1:60072293-60072312 Msa1027600:intron 35.0%
! AAAGACTTTTTGTGGTGAAG+CGG + chr7_1:60072419-60072438 None:intergenic 35.0%
GGTAATGTTCGGCAATAATA+TGG + chr7_1:60072897-60072916 None:intergenic 35.0%
CATTGGAAAATGGTGAAAAG+TGG + chr7_1:60073060-60073079 None:intergenic 35.0%
!! TTGTTTTGTCGTGTAGTCAT+TGG - chr7_1:60073235-60073254 Msa1027600:CDS 35.0%
AAGGTAAAATTGAGAAGGAC+AGG - chr7_1:60073263-60073282 Msa1027600:intron 35.0%
AGGTAAAATTGAGAAGGACA+GGG - chr7_1:60073264-60073283 Msa1027600:intron 35.0%
AGGACAGGGTTGAAAATATT+TGG - chr7_1:60073278-60073297 Msa1027600:intron 35.0%
GTAGTCAATAAGTCAAACCT+TGG + chr7_1:60073482-60073501 None:intergenic 35.0%
TTCATTACTACATGCATTGC+AGG + chr7_1:60073863-60073882 None:intergenic 35.0%
GCAATGCATGTAGTAATGAA+CGG - chr7_1:60073863-60073882 Msa1027600:CDS 35.0%
! CAGATCTGGTAGTGATAACA+TGG - chr7_1:60067687-60067706 Msa1027600:CDS 40.0%
! TCTGGTAGTGATAACATGGA+TGG - chr7_1:60067691-60067710 Msa1027600:CDS 40.0%
!! GAATTTGTTGAGGAGTGTGT+CGG + chr7_1:60067774-60067793 None:intergenic 40.0%
GTCACGAGAATTCACTACTT+AGG - chr7_1:60068279-60068298 Msa1027600:intron 40.0%
CCTCCACAATTTGAACACAT+TGG + chr7_1:60068362-60068381 None:intergenic 40.0%
CCAATGTGTTCAAATTGTGG+AGG - chr7_1:60068359-60068378 Msa1027600:intron 40.0%
!! TTGGTAACGACGTAATTGGA+CGG + chr7_1:60068496-60068515 None:intergenic 40.0%
!! GAGTTTGGTAACGACGTAAT+TGG + chr7_1:60068500-60068519 None:intergenic 40.0%
TTGCCTTCAACAATGCCTTT+AGG - chr7_1:60068557-60068576 Msa1027600:intron 40.0%
!! TGACCTAAAGGCATTGTTGA+AGG + chr7_1:60068563-60068582 None:intergenic 40.0%
TCACCACCTTCAATTACAAG+AGG - chr7_1:60068605-60068624 Msa1027600:intron 40.0%
GTTCCTCTTGTAATTGAAGG+TGG + chr7_1:60068611-60068630 None:intergenic 40.0%
CACAAACTAATGAGCCTCTT+TGG - chr7_1:60068735-60068754 Msa1027600:intron 40.0%
GCCTCAGAAACAAAACCATT+TGG + chr7_1:60068845-60068864 None:intergenic 40.0%
GAAAGGCTAAGAAGAGAAGT+TGG + chr7_1:60068966-60068985 None:intergenic 40.0%
GGAGTAGTCATTAGTGTTAC+AGG + chr7_1:60069107-60069126 None:intergenic 40.0%
AGCTTCTTGCAATCACACAA+GGG + chr7_1:60069413-60069432 None:intergenic 40.0%
! TTCGTGAGGTGAGTTTTCTA+AGG - chr7_1:60069674-60069693 Msa1027600:intron 40.0%
AGCTTCTCTGATGGTATCTA+TGG + chr7_1:60069746-60069765 None:intergenic 40.0%
!! CACCCACTTTTCTTAACTGT+AGG - chr7_1:60069776-60069795 Msa1027600:intron 40.0%
CCTCCTACAGTTAAGAAAAG+TGG + chr7_1:60069782-60069801 None:intergenic 40.0%
!! CCACTTTTCTTAACTGTAGG+AGG - chr7_1:60069779-60069798 Msa1027600:intron 40.0%
GTGGTTCAAGATATGCCAAA+TGG - chr7_1:60069817-60069836 Msa1027600:intron 40.0%
CATGAGCTTTCTAAGTTGCT+TGG + chr7_1:60070425-60070444 None:intergenic 40.0%
CAAGCAACTTAGAAAGCTCA+TGG - chr7_1:60070423-60070442 Msa1027600:intron 40.0%
TCATGTTAACCGATGTTCTC+CGG - chr7_1:60070536-60070555 Msa1027600:intron 40.0%
TAGTTTCCTTAACCAGTGTC+CGG + chr7_1:60070558-60070577 None:intergenic 40.0%
AGTCTCTCAAATATGCAACC+TGG - chr7_1:60070718-60070737 Msa1027600:intron 40.0%
GTCTCTCAAATATGCAACCT+GGG - chr7_1:60070719-60070738 Msa1027600:intron 40.0%
TCTATTCCAATCTCTCATGC+AGG - chr7_1:60070961-60070980 Msa1027600:intron 40.0%
TCATGAAATTGTGTGTGACC+TGG - chr7_1:60071012-60071031 Msa1027600:intron 40.0%
TCTCCATAAGGTAGATACCT+TGG - chr7_1:60071275-60071294 Msa1027600:intron 40.0%
! AGACCAAGGTATCTACCTTA+TGG + chr7_1:60071281-60071300 None:intergenic 40.0%
AGAAAATCTTGGAGAAAGCC+TGG + chr7_1:60071321-60071340 None:intergenic 40.0%
CACATGTTGAACAGGAATGA+AGG + chr7_1:60071399-60071418 None:intergenic 40.0%
TTCACAAGATTACGGTGACA+TGG + chr7_1:60071521-60071540 None:intergenic 40.0%
AACATATGATGCAGGTGACA+TGG - chr7_1:60071878-60071897 Msa1027600:CDS 40.0%
ACATATGATGCAGGTGACAT+GGG - chr7_1:60071879-60071898 Msa1027600:CDS 40.0%
TATAGACCCTTGCTAAGCTT+AGG - chr7_1:60071943-60071962 Msa1027600:intron 40.0%
AGATGGCTAGACATTCACAT+TGG + chr7_1:60072011-60072030 None:intergenic 40.0%
TATACCTGAGTGTTCTCTAG+CGG + chr7_1:60072052-60072071 None:intergenic 40.0%
! TGTAAGTTGAGGATCCACAT+TGG + chr7_1:60072095-60072114 None:intergenic 40.0%
AATCCTCTAGCTGTAAGTTG+AGG + chr7_1:60072106-60072125 None:intergenic 40.0%
ACATAGGAACATAACACCGT+GGG + chr7_1:60072176-60072195 None:intergenic 40.0%
CTGCACTTATTGCTACACAT+AGG + chr7_1:60072192-60072211 None:intergenic 40.0%
CTATGTGTAGCAATAAGTGC+AGG - chr7_1:60072190-60072209 Msa1027600:intron 40.0%
GGTGCACAAATGGAACAAAT+TGG - chr7_1:60072285-60072304 Msa1027600:intron 40.0%
AAATTGGATGCAGGGAATGT+GGG - chr7_1:60072301-60072320 Msa1027600:intron 40.0%
! AAGACTTTTTGTGGTGAAGC+GGG + chr7_1:60072418-60072437 None:intergenic 40.0%
ACGAGAAGCTTAGAAGTGAA+TGG - chr7_1:60072452-60072471 Msa1027600:intron 40.0%
CGAGAAGCTTAGAAGTGAAT+GGG - chr7_1:60072453-60072472 Msa1027600:intron 40.0%
ATATGCATACACTAGCTCGT+AGG + chr7_1:60072558-60072577 None:intergenic 40.0%
CGTGTAGTCATTGGATGAAA+AGG - chr7_1:60073244-60073263 Msa1027600:CDS 40.0%
AGAAACAAACACAGACGCAT+CGG - chr7_1:60073805-60073824 Msa1027600:CDS 40.0%
TGCATTGCAGGAATATCTAC+AGG + chr7_1:60073851-60073870 None:intergenic 40.0%
ATGCATGTAGTAATGAACGG+CGG - chr7_1:60073866-60073885 Msa1027600:CDS 40.0%
GTAGACTGTTCACAAGTATC+TGG + chr7_1:60074021-60074040 None:intergenic 40.0%
AGCAAATATCTGCAGTCACA+CGG - chr7_1:60074224-60074243 Msa1027600:five_prime_UTR 40.0%
ATTTCCTGCAGTCGTGATAA+TGG + chr7_1:60074281-60074300 None:intergenic 40.0%
!! TGCAGGAAATGTTGATGGTA+GGG - chr7_1:60074291-60074310 Msa1027600:five_prime_UTR 40.0%
GGTTGTGAGATTGCACTAGA+AGG + chr7_1:60067387-60067406 None:intergenic 45.0%
GAACATGAAAGCTGCAGATC+TGG - chr7_1:60067673-60067692 Msa1027600:CDS 45.0%
! TGAACTTGCTTTGGCTGCAA+TGG - chr7_1:60068694-60068713 Msa1027600:intron 45.0%
! TCTGAGGCTTCTAGAGAAAG+TGG - chr7_1:60068857-60068876 Msa1027600:intron 45.0%
GAGCTTCTTGCAATCACACA+AGG + chr7_1:60069414-60069433 None:intergenic 45.0%
! CAGTTGTAGAGCACCATTTC+TGG + chr7_1:60069472-60069491 None:intergenic 45.0%
CAGAAATGGTGCTCTACAAC+TGG - chr7_1:60069470-60069489 Msa1027600:intron 45.0%
AGAAAACTCACCTCACGAAC+AGG + chr7_1:60069673-60069692 None:intergenic 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG - chr7_1:60069697-60069716 Msa1027600:intron 45.0%
TTTGCAAGCAGCATGCAGAA+GGG - chr7_1:60069698-60069717 Msa1027600:intron 45.0%
TCTTGAACCACACAACCAGA+AGG + chr7_1:60069808-60069827 None:intergenic 45.0%
AGGGGGAAAACACAAAGCTA+AGG - chr7_1:60070378-60070397 Msa1027600:intron 45.0%
TAGAACCACTCTCTCAGTGA+TGG - chr7_1:60070486-60070505 Msa1027600:intron 45.0%
TCAAATATGCAACCTGGGCT+AGG - chr7_1:60070724-60070743 Msa1027600:intron 45.0%
GAACAACCTGCATGAGAGAT+TGG + chr7_1:60070970-60070989 None:intergenic 45.0%
GTACTTGCTCGATCTCCATA+AGG - chr7_1:60071263-60071282 Msa1027600:intron 45.0%
GGCAAAATCACGAGTATTCG+CGG + chr7_1:60071465-60071484 None:intergenic 45.0%
GTCTATAGAGCTGGTGAACT+TGG + chr7_1:60071930-60071949 None:intergenic 45.0%
TTAGCAAGGGTCTATAGAGC+TGG + chr7_1:60071939-60071958 None:intergenic 45.0%
! CTAAGCTTAGGCATGGGTTT+TGG - chr7_1:60071955-60071974 Msa1027600:intron 45.0%
! ACATTCACATTGGCGTTGGA+GGG + chr7_1:60072001-60072020 None:intergenic 45.0%
CTAGACATTCACATTGGCGT+TGG + chr7_1:60072005-60072024 None:intergenic 45.0%
ATACCTGAGTGTTCTCTAGC+GGG + chr7_1:60072051-60072070 None:intergenic 45.0%
! CATTGGTACGTGTGGATTGA+TGG + chr7_1:60072078-60072097 None:intergenic 45.0%
TCAATCCACACGTACCAATG+TGG - chr7_1:60072078-60072097 Msa1027600:CDS 45.0%
GATCCTCAACTTACAGCTAG+AGG - chr7_1:60072100-60072119 Msa1027600:CDS 45.0%
! CATAACACCGTGGGTTATTG+TGG + chr7_1:60072167-60072186 None:intergenic 45.0%
CACATAGGAACATAACACCG+TGG + chr7_1:60072177-60072196 None:intergenic 45.0%
TGTGTAGCAATAAGTGCAGG+AGG - chr7_1:60072193-60072212 Msa1027600:intron 45.0%
TAGCAATAAGTGCAGGAGGA+AGG - chr7_1:60072197-60072216 Msa1027600:intron 45.0%
CAAATTGGATGCAGGGAATG+TGG - chr7_1:60072300-60072319 Msa1027600:intron 45.0%
AGGACGTTAGGGTAATGACA+AGG - chr7_1:60072326-60072345 Msa1027600:intron 45.0%
GGTAATGACAAGGAAGAGTG+TGG - chr7_1:60072336-60072355 Msa1027600:intron 45.0%
! AAGGAAGAGTGTGGATGATC+CGG - chr7_1:60072345-60072364 Msa1027600:intron 45.0%
TTAGTGCAGCAACCTCAGTT+TGG - chr7_1:60072389-60072408 Msa1027600:intron 45.0%
TTCTAAGCTTCTCGTTGCGA+AGG + chr7_1:60072447-60072466 None:intergenic 45.0%
GAATGGGACATACTCTCCAA+CGG - chr7_1:60072469-60072488 Msa1027600:intron 45.0%
ATGTGAGCCATCTCTTGCAT+TGG + chr7_1:60072499-60072518 None:intergenic 45.0%
ATTGCCAAAGGACATGACCA+TGG - chr7_1:60072517-60072536 Msa1027600:intron 45.0%
TCTTGCTAACTAGTGCTCTC+AGG - chr7_1:60072957-60072976 Msa1027600:CDS 45.0%
CTTGCTAACTAGTGCTCTCA+GGG - chr7_1:60072958-60072977 Msa1027600:CDS 45.0%
TGCTCTCAGGGCAATGATTA+AGG - chr7_1:60072970-60072989 Msa1027600:CDS 45.0%
GAAACAAACACAGACGCATC+GGG - chr7_1:60073806-60073825 Msa1027600:CDS 45.0%
AAACAAACACAGACGCATCG+GGG - chr7_1:60073807-60073826 Msa1027600:CDS 45.0%
TTATGTTGCGCTTCTTCCGT+CGG - chr7_1:60073898-60073917 Msa1027600:CDS 45.0%
GCTATGTCCATCTGGTAACA+CGG + chr7_1:60073930-60073949 None:intergenic 45.0%
TTACCAGATGGACATAGCGA+CGG - chr7_1:60073932-60073951 Msa1027600:CDS 45.0%
!! AGCGAGTGGATCACTTTTGA+CGG - chr7_1:60073988-60074007 Msa1027600:intron 45.0%
ACTTGTGAACAGTCTACCGA+CGG - chr7_1:60074024-60074043 Msa1027600:intron 45.0%
ACGACTGCAGGAAATGTTGA+TGG - chr7_1:60074286-60074305 Msa1027600:five_prime_UTR 45.0%
!! CTGCAGGAAATGTTGATGGT+AGG - chr7_1:60074290-60074309 Msa1027600:five_prime_UTR 45.0%
!! AACAAATTAATTATTTAAAA+GGG + chr7_1:60070895-60070914 None:intergenic 5.0%
!! ATTAAAATAATATTCTTATA+GGG + chr7_1:60070992-60071011 None:intergenic 5.0%
!! AATTAAAATAATATTCTTAT+AGG + chr7_1:60070993-60071012 None:intergenic 5.0%
GACCGAGTTTGTACACTTGC+CGG - chr7_1:60068458-60068477 Msa1027600:intron 50.0%
TGCCGGCAAGTGTACAAACT+CGG + chr7_1:60068463-60068482 None:intergenic 50.0%
ACACTTGCCGGCAAGTTTCT+AGG - chr7_1:60068470-60068489 Msa1027600:intron 50.0%
!! TCCATTGGTTCCTGTTCGTG+AGG - chr7_1:60069660-60069679 Msa1027600:intron 50.0%
ACCTCACGAACAGGAACCAA+TGG + chr7_1:60069664-60069683 None:intergenic 50.0%
TTGCAAGCAGCATGCAGAAG+GGG - chr7_1:60069699-60069718 Msa1027600:intron 50.0%
ACCATCAGAGAAGCTTCAGC+TGG - chr7_1:60069751-60069770 Msa1027600:intron 50.0%
ACCAGCTGAAGCTTCTCTGA+TGG + chr7_1:60069755-60069774 None:intergenic 50.0%
AACTGTAGGAGGCTTCCTTC+TGG - chr7_1:60069790-60069809 Msa1027600:intron 50.0%
AACCAGTGTCCGGAGAACAT+CGG + chr7_1:60070548-60070567 None:intergenic 50.0%
! TGTTCTCCGGACACTGGTTA+AGG - chr7_1:60070549-60070568 Msa1027600:intron 50.0%
GTAATGTTAACCGGTGCTCC+CGG + chr7_1:60070686-60070705 None:intergenic 50.0%
! GTTGACTCAACGACAGACCA+AGG + chr7_1:60071295-60071314 None:intergenic 50.0%
TGTCGTTGAGTCAACTTGCC+AGG - chr7_1:60071300-60071319 Msa1027600:intron 50.0%
TATGATGCAGGTGACATGGG+TGG - chr7_1:60071882-60071901 Msa1027600:CDS 50.0%
GGTGGAGCATGCAGAATATG+AGG - chr7_1:60071900-60071919 Msa1027600:intron 50.0%
ACCCTTGCTAAGCTTAGGCA+TGG - chr7_1:60071948-60071967 Msa1027600:intron 50.0%
CCCATGCCTAAGCTTAGCAA+GGG + chr7_1:60071952-60071971 None:intergenic 50.0%
CCCTTGCTAAGCTTAGGCAT+GGG - chr7_1:60071949-60071968 Msa1027600:intron 50.0%
ACCCATGCCTAAGCTTAGCA+AGG + chr7_1:60071953-60071972 None:intergenic 50.0%
! GACATTCACATTGGCGTTGG+AGG + chr7_1:60072002-60072021 None:intergenic 50.0%
TACCTGAGTGTTCTCTAGCG+GGG + chr7_1:60072050-60072069 None:intergenic 50.0%
AGGATCCACATTGGTACGTG+TGG + chr7_1:60072086-60072105 None:intergenic 50.0%
! AGGAAGAGTGTGGATGATCC+GGG - chr7_1:60072346-60072365 Msa1027600:intron 50.0%
GAGATGGCTCACATTGCCAA+AGG - chr7_1:60072505-60072524 Msa1027600:intron 50.0%
GTTGCCATGGTCATGTCCTT+TGG + chr7_1:60072524-60072543 None:intergenic 50.0%
GCATACACTAGCTCGTAGGA+GGG + chr7_1:60072554-60072573 None:intergenic 50.0%
TGCATACACTAGCTCGTAGG+AGG + chr7_1:60072555-60072574 None:intergenic 50.0%
TATGTTGCGCTTCTTCCGTC+GGG - chr7_1:60073899-60073918 Msa1027600:CDS 50.0%
TACCAGATGGACATAGCGAC+GGG - chr7_1:60073933-60073952 Msa1027600:CDS 50.0%
GGGAGTGGTAATCACGATGA+CGG - chr7_1:60073953-60073972 Msa1027600:CDS 50.0%
GGAGTGGTAATCACGATGAC+GGG - chr7_1:60073954-60073973 Msa1027600:intron 50.0%
ACCACCATTATCACGACTGC+AGG - chr7_1:60074274-60074293 Msa1027600:five_prime_UTR 50.0%
!! TCCTGCAGTCGTGATAATGG+TGG + chr7_1:60074278-60074297 None:intergenic 50.0%
TGGACGGCCTAGAAACTTGC+CGG + chr7_1:60068480-60068499 None:intergenic 55.0%
AGCAGCATGCAGAAGGGGTA+TGG - chr7_1:60069704-60069723 Msa1027600:intron 55.0%
! GCAGCATGCAGAAGGGGTAT+GGG - chr7_1:60069705-60069724 Msa1027600:intron 55.0%
! GAGGCTTCCTTCTGGTTGTG+TGG - chr7_1:60069798-60069817 Msa1027600:intron 55.0%
GGGAACCATCACTGAGAGAG+TGG + chr7_1:60070494-60070513 None:intergenic 55.0%
AACCGATGTTCTCCGGACAC+TGG - chr7_1:60070543-60070562 Msa1027600:intron 55.0%
! AACCAATGATCCGGGAGCAC+CGG - chr7_1:60070673-60070692 Msa1027600:intron 55.0%
!! TGGGTTTTGGCGCACAACGT+TGG - chr7_1:60071968-60071987 Msa1027600:intron 55.0%
!! GGGTTTTGGCGCACAACGTT+GGG - chr7_1:60071969-60071988 Msa1027600:intron 55.0%
TGCCGGAGTTTGTGCATCGA+CGG - chr7_1:60072264-60072283 Msa1027600:intron 55.0%
CACCGTCGATGCACAAACTC+CGG + chr7_1:60072269-60072288 None:intergenic 55.0%
! GTGCATCGACGGTGCACAAA+TGG - chr7_1:60072275-60072294 Msa1027600:intron 55.0%
GAATGTGGGCGAGGACGTTA+GGG - chr7_1:60072315-60072334 Msa1027600:intron 55.0%
GCTGCACTAAGCACAATCCC+CGG + chr7_1:60072379-60072398 None:intergenic 55.0%
TGAAGCGGGTAGCCAAACTG+AGG + chr7_1:60072404-60072423 None:intergenic 55.0%
TGGGACATACTCTCCAACGG+TGG - chr7_1:60072472-60072491 Msa1027600:intron 55.0%
CTCTTGCATTGGACCACCGT+TGG + chr7_1:60072488-60072507 None:intergenic 55.0%
CGGTGGTCCAATGCAAGAGA+TGG - chr7_1:60072489-60072508 Msa1027600:intron 55.0%
GGTTTCGCCGTGTTACCAGA+TGG - chr7_1:60073920-60073939 Msa1027600:CDS 55.0%
AAAGCTCGCGGTGGAATCAG+TGG - chr7_1:60074048-60074067 Msa1027600:intron 55.0%
CGCGGTGGAATCAGTGGAAA+CGG - chr7_1:60074054-60074073 Msa1027600:intron 55.0%
! TGCAGAAGGGGTATGGGCAG+TGG - chr7_1:60069711-60069730 Msa1027600:intron 60.0%
AACCGGTGCTCCCGGATCAT+TGG + chr7_1:60070678-60070697 None:intergenic 60.0%
!! GAGAGGAAGCATCCTAGCCC+AGG + chr7_1:60070739-60070758 None:intergenic 60.0%
CTCCCCGCTAGAGAACACTC+AGG - chr7_1:60072045-60072064 Msa1027600:intron 60.0%
GGAATGTGGGCGAGGACGTT+AGG - chr7_1:60072314-60072333 Msa1027600:intron 60.0%
GCACTAAGCACAATCCCCGG+TGG + chr7_1:60072376-60072395 None:intergenic 60.0%
GGAGGGAGACACAGTTGCCA+TGG + chr7_1:60072537-60072556 None:intergenic 60.0%
GGTAACACGGCGAAACCCGA+CGG + chr7_1:60073917-60073936 None:intergenic 60.0%
CTCCCGTCGCTATGTCCATC+TGG + chr7_1:60073938-60073957 None:intergenic 60.0%
GATGGACATAGCGACGGGAG+TGG - chr7_1:60073938-60073957 Msa1027600:CDS 60.0%
!! ATCACGATGACGGGTCGCAG+CGG - chr7_1:60073963-60073982 Msa1027600:intron 60.0%
TCTACCGACGGCAAAGCTCG+CGG - chr7_1:60074036-60074055 Msa1027600:intron 60.0%
GGATGCAGGGAATGTGGGCG+AGG - chr7_1:60072306-60072325 Msa1027600:intron 65.0%
GGATGATCCGGGTGAGCCAC+CGG - chr7_1:60072357-60072376 Msa1027600:intron 65.0%
GATGATCCGGGTGAGCCACC+GGG - chr7_1:60072358-60072377 Msa1027600:intron 65.0%
ATGATCCGGGTGAGCCACCG+GGG - chr7_1:60072359-60072378 Msa1027600:intron 65.0%
ACAATCCCCGGTGGCTCACC+CGG + chr7_1:60072367-60072386 None:intergenic 65.0%
TCCACCGCGAGCTTTGCCGT+CGG + chr7_1:60074043-60074062 None:intergenic 65.0%
ACCGACGGCAAAGCTCGCGG+TGG - chr7_1:60074039-60074058 Msa1027600:intron 70.0%
GGGTCGCAGCGGAGAGCGAG+TGG - chr7_1:60073974-60073993 Msa1027600:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 60067207 60074339 60067207 ID=Msa1027600;Name=Msa1027600
chr7_1 mRNA 60067207 60074339 60067207 ID=Msa1027600-mRNA-1;Parent=Msa1027600;Name=Msa1027600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=174|1|1|1|1|1|9|201|778
chr7_1 exon 60067207 60067779 60067207 ID=Msa1027600-mRNA-1:exon:12357;Parent=Msa1027600-mRNA-1
chr7_1 exon 60068979 60069346 60068979 ID=Msa1027600-mRNA-1:exon:12356;Parent=Msa1027600-mRNA-1
chr7_1 exon 60069480 60069654 60069480 ID=Msa1027600-mRNA-1:exon:12355;Parent=Msa1027600-mRNA-1
chr7_1 exon 60071697 60071912 60071697 ID=Msa1027600-mRNA-1:exon:12354;Parent=Msa1027600-mRNA-1
chr7_1 exon 60072055 60072156 60072055 ID=Msa1027600-mRNA-1:exon:12353;Parent=Msa1027600-mRNA-1
chr7_1 exon 60072618 60073280 60072618 ID=Msa1027600-mRNA-1:exon:12352;Parent=Msa1027600-mRNA-1
chr7_1 exon 60073527 60073644 60073527 ID=Msa1027600-mRNA-1:exon:12351;Parent=Msa1027600-mRNA-1
chr7_1 exon 60073740 60073972 60073740 ID=Msa1027600-mRNA-1:exon:12350;Parent=Msa1027600-mRNA-1
chr7_1 exon 60074076 60074339 60074076 ID=Msa1027600-mRNA-1:exon:12349;Parent=Msa1027600-mRNA-1
chr7_1 five_prime_UTR 60074166 60074339 60074166 ID=Msa1027600-mRNA-1:five_prime_utr;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60074076 60074165 60074076 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60073740 60073972 60073740 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60073527 60073644 60073527 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60072618 60073280 60072618 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60072055 60072156 60072055 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60071697 60071912 60071697 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60069480 60069654 60069480 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60068979 60069346 60068979 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 CDS 60067408 60067779 60067408 ID=Msa1027600-mRNA-1:cds;Parent=Msa1027600-mRNA-1
chr7_1 three_prime_UTR 60067207 60067407 60067207 ID=Msa1027600-mRNA-1:three_prime_utr;Parent=Msa1027600-mRNA-1
Gene Sequence

>Msa1027600

ATGCCTTCTAGTGCAATCTCACAACCTCGTTTATCAACTCCTACTTTGGTTAAATCCATGTTCAACTCATCTGGTTTATCTTTAGCACTTCAAACAAATATAGAAGCACAAGGTGGTGATATGAAGAGATTAATGGCAGAAAATTTCCATCAAACAAATAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGTCACGAGAATTCACTACTTAGGCAAGCAAATGATAAATTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCAATGTGTTCAAATTGTGGAGGACTAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGATTAAAAGATGAATTAGACCGAGTTTGTACACTTGCCGGCAAGTTTCTAGGCCGTCCAATTACGTCGTTACCAAACTCGAGTTTAGAAATTGGTTTTAATGGTTTGAACAATACTTTGCCTTCAACAATGCCTTTAGGTCAAGATTTTGGCATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAGTGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTAAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGATGCAAGCTGAACTTCAAGTACTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAGCTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGAGGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGCTAAGCTTAGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTCCAACGCCAATGTGAATGTCTAGCCATCTTAATGTCATCATCACTCCCCGCTAGAGAACACTCAGCAATAAGTGCAGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCACCGAATGACAAACAACTTTTGTGCCGGAGTTTGTGCATCGACGGTGCACAAATGGAACAAATTGGATGCAGGGAATGTGGGCGAGGACGTTAGGGTAATGACAAGGAAGAGTGTGGATGATCCGGGTGAGCCACCGGGGATTGTGCTTAGTGCAGCAACCTCAGTTTGGCTACCCGCTTCACCACAAAAAGTCTTTGATTTCCTTCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTCTCCAACGGTGGTCCAATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGCTATTAATTCAAGTCAAAGTAGCATGTTGATTCTACAAGAAACAAACACAGACGCATCGGGGTCGCTTGTTGTGTACGCTCCTGTAGATATTCCTGCAATGCATGTAGTAATGAACGGCGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTCGCCGTGTTACCAGATGGACATAGCGACGGGAGTGGTAATCACGATGACGGGTCGCAGCGGAGAGCGAGTGGATCACTTTTGACGGTAGCATTCCAGATACTTGTGAACAGTCTACCGACGGCAAAGCTCGCGGTGGAATCAGTGGAAACGGTGAACAATCTCATTTCATGTACTATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTGA
Protein sequence

>Msa1027600

MPSSAISQPRLSTPTLVKSMFNSSGLSLALQTNIEAQGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGLAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITSLPNSSLEIGFNGLNNTLPSTMPLGQDFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIREASAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILMSSSLPAREHSAISAGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLDAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAINSSQSSMLILQETNTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSDGSGNHDDGSQRRASGSLLTVAFQILVNSLPTAKLAVESVETVNNLISCTIQKIKVALQCES*