AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0553350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553350 MtrunA17_Chr4g0039031 96.296 567 20 1 1 566 1 567 0.0 1127
Msa0553350 MtrunA17_Chr7g0217861 94.017 117 7 0 432 548 1 117 1.18e-73 231
Msa0553350 MtrunA17_Chr8g0368521 32.812 192 118 5 80 264 79 266 6.65e-18 88.2
Msa0553350 MtrunA17_Chr3g0116881 24.925 333 208 9 251 555 252 570 1.46e-14 76.6
Msa0553350 MtrunA17_Chr1g0199851 25.000 300 210 10 258 546 371 666 1.22e-13 73.9
Msa0553350 MtrunA17_Chr3g0107391 24.625 333 209 9 251 555 275 593 2.10e-13 73.2
Msa0553350 MtrunA17_Chr3g0113261 24.925 333 208 9 251 555 276 594 6.03e-13 71.6
Msa0553350 MtrunA17_Chr1g0211991 26.421 299 192 7 277 555 270 560 9.81e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0553350 AT1G18870.1 56.505 515 201 5 55 554 47 553 0.0 589
Msa0553350 AT1G74710.1 54.221 533 215 5 46 556 35 560 0.0 583
Msa0553350 AT1G18870.2 56.360 511 200 5 59 554 1 503 0.0 582
Msa0553350 AT1G74710.2 53.861 531 216 5 46 554 35 558 0.0 573
Msa0553350 AT1G18870.3 53.398 515 193 6 55 554 47 529 0.0 538
Msa0553350 AT1G68890.1 29.915 234 150 6 43 266 43 272 1.28e-20 97.1
Msa0553350 AT2G29690.1 27.309 249 148 4 327 555 365 600 6.81e-14 75.1

Find 172 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATAAAATTGCAATTA+TGG 0.163087 4_1:-50480822 Msa0553350:three_prime_UTR
AAGAATACAAACTAATTAAA+TGG 0.175379 4_1:-50487569 Msa0553350:five_prime_UTR
TTTCTTTGCTTTAGATATTA+TGG 0.207430 4_1:-50480927 Msa0553350:intron
AGCTCATCCCACTCCAAGTA+TGG 0.248367 4_1:+50481735 None:intergenic
CATTTATTTGCTCAATTAAC+TGG 0.264103 4_1:-50482743 Msa0553350:CDS
GGAGGAGATTTGGACCAAAT+TGG 0.264110 4_1:-50480795 Msa0553350:three_prime_UTR
AGCAACTATTTCACAGAAAA+TGG 0.276767 4_1:-50483762 Msa0553350:CDS
AGAAAGCATACGAAGAAAAT+TGG 0.278150 4_1:-50483510 Msa0553350:CDS
GGAAACTTGGTTAGCATTGC+TGG 0.279230 4_1:-50486145 Msa0553350:CDS
TCATCAGAGTGGATGGCTTT+TGG 0.282890 4_1:-50485710 Msa0553350:CDS
CGCGTTTCTATCGTCCTAAC+TGG 0.284030 4_1:+50486388 None:intergenic
CTACAAACCTTATTTGTTGA+TGG 0.300442 4_1:+50481383 None:intergenic
CCGATAAATGCCGGTGCATT+AGG 0.301055 4_1:+50484390 None:intergenic
CACCCAAGTCCTGCAGTTTG+TGG 0.304536 4_1:-50482583 Msa0553350:CDS
GCTGGACCTGTTGGTTGGTT+TGG 0.311172 4_1:-50482247 Msa0553350:CDS
TTATGGAGAGGGAGGAGATT+TGG 0.314731 4_1:-50480805 Msa0553350:three_prime_UTR
GTTCACTAAGTTACTTAAAC+TGG 0.317030 4_1:-50481444 Msa0553350:CDS
AGACAAGCTAACCACGTTAG+AGG 0.324370 4_1:+50484562 None:intergenic
CTTCTTTACTAGGAATGTTA+TGG 0.328879 4_1:+50484801 None:intergenic
TTTGTATTCTTCATTTCATT+AGG 0.334473 4_1:+50487581 None:intergenic
ATCCAATCCCAATAGGAAAA+TGG 0.334738 4_1:+50486088 None:intergenic
GCTTCAACTTGCTCCTCAAT+AGG 0.339305 4_1:+50486247 None:intergenic
AACATGAGGGAGATGGAAAA+TGG 0.350219 4_1:+50487432 None:intergenic
CCAAAGCTTCACTAGTGATA+TGG 0.351321 4_1:+50483737 None:intergenic
GGCTATGTACAGTCTCAAAA+TGG 0.363690 4_1:-50486335 Msa0553350:CDS
CATTACTTTAAGAACAACTT+TGG 0.366850 4_1:+50480632 None:intergenic
ATATAATACAACATGTACTA+TGG 0.367333 4_1:+50480746 None:intergenic
CCTAATGCACCGGCATTTAT+CGG 0.372337 4_1:-50484390 Msa0553350:CDS
AGGTAGCATCCCTTACAAAT+AGG 0.375008 4_1:+50486460 None:intergenic
AGATTCCAATCTTCTTTACT+AGG 0.376208 4_1:+50484791 None:intergenic
ATGAGCTCCATCAACAAATA+AGG 0.381553 4_1:-50481390 Msa0553350:intron
GCAAATAAATGTTGGATCCT+TGG 0.384897 4_1:+50482755 None:intergenic
GCAATGCTAACCAAGTTTCC+AGG 0.385429 4_1:+50486148 None:intergenic
TGCTTACCACTACTATTGCT+TGG 0.388809 4_1:-50485277 Msa0553350:CDS
GGACCTGTTGGTTGGTTTGG+AGG 0.393014 4_1:-50482244 Msa0553350:CDS
ATTGGGATTGGATATCTATA+AGG 0.399903 4_1:-50486078 Msa0553350:CDS
AGTCAAATGAGCACCCAATT+TGG 0.401347 4_1:+50480781 None:intergenic
GAGGAGATTTGGACCAAATT+GGG 0.401584 4_1:-50480794 Msa0553350:three_prime_UTR
GTTGTTGTTTCAAAGTGATA+TGG 0.401605 4_1:+50487536 None:intergenic
ATGCCAGATGAGGTACAAAA+TGG 0.404784 4_1:+50486286 None:intergenic
TGGTCCTCTAGCACGGGTTC+CGG 0.410896 4_1:+50483714 None:intergenic
GTGAGTTTGCCGTTGGCATC+AGG 0.415994 4_1:-50482213 Msa0553350:CDS
GAAATCTTGCCCTGGAAACT+TGG 0.418146 4_1:-50486158 Msa0553350:CDS
CAGGTCAGCATTGGTGGAAC+AGG 0.418978 4_1:-50482194 Msa0553350:intron
TGCCCTTTGATTCGCGCATA+TGG 0.422545 4_1:-50485764 Msa0553350:CDS
AGCAAGTTGAAGCAATTGAT+TGG 0.422787 4_1:-50486237 Msa0553350:CDS
CTTCCTAGATGCTACTTCTC+TGG 0.424133 4_1:-50486190 Msa0553350:CDS
TTTCTGTGAAATAGTTGCTC+TGG 0.426610 4_1:+50483766 None:intergenic
TCAATGAATGGTTGTAAAGA+AGG 0.426979 4_1:-50486436 Msa0553350:CDS
TTTCTACTTCATGATTCCTC+AGG 0.428813 4_1:-50485684 Msa0553350:intron
GCTTACCACTACTATTGCTT+GGG 0.431278 4_1:-50485276 Msa0553350:CDS
ATGCCATGCTCCGTATCAAT+TGG 0.432507 4_1:+50480849 None:intergenic
TGTTCAGAGACCTATTTGTA+AGG 0.433073 4_1:-50486470 Msa0553350:intron
GGAAGGAAGCAACCCATACT+TGG 0.437293 4_1:-50481748 Msa0553350:CDS
TATAGATATCCAATCCCAAT+AGG 0.437928 4_1:+50486081 None:intergenic
GTAAGTCAAGTTCAATTTGA+CGG 0.442874 4_1:+50483677 None:intergenic
CCATATCACTAGTGAAGCTT+TGG 0.446524 4_1:-50483737 Msa0553350:CDS
GTTGAGTTTAATGAGCTTGA+AGG 0.447276 4_1:-50485308 Msa0553350:CDS
GGATGCTACCTTTCAATGAA+TGG 0.448779 4_1:-50486448 Msa0553350:CDS
AAAACTTGTGCCTCTTCTGT+TGG 0.455039 4_1:+50482556 None:intergenic
CTTGGGATAATGATCTTTGT+TGG 0.458807 4_1:-50485259 Msa0553350:CDS
GCTTTGATATATGCTGGAAC+TGG 0.459668 4_1:-50481777 Msa0553350:CDS
AAGCCACAAACTGCAGGACT+TGG 0.460419 4_1:+50482580 None:intergenic
TGTTTCAAAGTGATATGGTT+TGG 0.460796 4_1:+50487541 None:intergenic
TCTTTGTTGGTCGTGGGAAA+AGG 0.461435 4_1:-50485246 Msa0553350:CDS
GAGAGTTGAGGTTCCTATTG+AGG 0.466956 4_1:-50486260 Msa0553350:CDS
AAAGTTCAAGAGAACCAGTT+AGG 0.471129 4_1:-50486402 Msa0553350:CDS
AATGTTGGAGGAGCTTGCTT+AGG 0.475322 4_1:+50484836 None:intergenic
GCCATTGCAGCTGATGCTAC+TGG 0.478778 4_1:+50486355 None:intergenic
TGGCATCAGGTCAGCATTGG+TGG 0.478970 4_1:-50482200 Msa0553350:CDS
AGAATACAAACTAATTAAAT+GGG 0.480513 4_1:-50487568 Msa0553350:five_prime_UTR
CCTCCTCCAAACCAACCAAC+AGG 0.481639 4_1:+50482241 None:intergenic
CCTCCATATGCGCGAATCAA+AGG 0.481748 4_1:+50485761 None:intergenic
CCTGTTGGTTGGTTTGGAGG+AGG 0.487475 4_1:-50482241 Msa0553350:CDS
ACATTCCTAGTAAAGAAGAT+TGG 0.489547 4_1:-50484796 Msa0553350:CDS
CTAGGTGCTTTGATATATGC+TGG 0.491160 4_1:-50481783 Msa0553350:CDS
CGTTGGCATCAGGTCAGCAT+TGG 0.491560 4_1:-50482203 Msa0553350:CDS
GTAAACTCAATGTCGTCCTT+CGG 0.493229 4_1:+50483542 None:intergenic
ATGTTGTTGTCGTTGTCTCT+TGG 0.494505 4_1:+50487307 None:intergenic
ACAAACTTTATCAACACAAA+TGG 0.495884 4_1:-50487356 Msa0553350:CDS
TGGCTGCTTAATATCAATGT+TGG 0.498602 4_1:+50484821 None:intergenic
TTAATTGAGCAAATAAATGT+TGG 0.499910 4_1:+50482747 None:intergenic
GTTAAGAAACGAAGAGGATG+AGG 0.505866 4_1:-50482717 Msa0553350:intron
TTGGTTAGCATTGCTGGTGT+TGG 0.507263 4_1:-50486139 Msa0553350:CDS
TCAAAACGATTGTAGGTTGA+AGG 0.507970 4_1:-50484444 Msa0553350:intron
CTCCATATGCGCGAATCAAA+GGG 0.510017 4_1:+50485762 None:intergenic
ATAAAATTGCAATTATGGAG+AGG 0.516343 4_1:-50480817 Msa0553350:three_prime_UTR
GCTAGAACTCAAAACATCTC+AGG 0.519609 4_1:-50481715 Msa0553350:intron
TTGCCAGAGAAGTAGCATCT+AGG 0.520561 4_1:+50486187 None:intergenic
CTGCTTAATATCAATGTTGG+AGG 0.521541 4_1:+50484824 None:intergenic
ATATGCTGGAACTGGAATAG+TGG 0.522449 4_1:-50481769 Msa0553350:CDS
ACCAGTAGCATCAGCTGCAA+TGG 0.522993 4_1:-50486356 Msa0553350:CDS
CTAGTGATGGTCCTCTAGCA+CGG 0.525024 4_1:+50483707 None:intergenic
TTCAAAGTGATATGGTTTGG+TGG 0.528437 4_1:+50487544 None:intergenic
TCAAAGTGATATGGTTTGGT+GGG 0.529430 4_1:+50487545 None:intergenic
TTCGCAGGCAGTCTGCGAAA+AGG 0.530662 4_1:-50482813 Msa0553350:intron
TGTATGCTGGACCTGTTGGT+TGG 0.531912 4_1:-50482252 Msa0553350:CDS
TTCCTTCACACATAAACTCA+TGG 0.533478 4_1:-50487408 Msa0553350:exon
AAGGAAGAACATGAGGGAGA+TGG 0.535903 4_1:+50487425 None:intergenic
ATAATGATCTTTGTTGGTCG+TGG 0.536372 4_1:-50485253 Msa0553350:CDS
ATTCCAATTGATACGGAGCA+TGG 0.537685 4_1:-50480852 Msa0553350:three_prime_UTR
TAATGATCTTTGTTGGTCGT+GGG 0.538149 4_1:-50485252 Msa0553350:CDS
GTTGGAAAGCCACAAACTGC+AGG 0.539573 4_1:+50482574 None:intergenic
CTTTACAACCATTCATTGAA+AGG 0.540015 4_1:+50486440 None:intergenic
TATTTGCTCAATTAACTGGA+AGG 0.540497 4_1:-50482739 Msa0553350:CDS
AAATGGCTGTGACTGCGAAA+AGG 0.540950 4_1:+50486105 None:intergenic
GAGTGTTATTCCAATTGATA+CGG 0.541124 4_1:-50480859 Msa0553350:three_prime_UTR
GTTCAGAGACCTATTTGTAA+GGG 0.543319 4_1:-50486469 Msa0553350:intron
CCTTCAGCCACCTAATGCAC+CGG 0.546354 4_1:-50484400 Msa0553350:CDS
TAATGTTTCATCAGAGTGGA+TGG 0.547863 4_1:-50485717 Msa0553350:CDS
ATGTGTGAAGGAAGAACATG+AGG 0.555738 4_1:+50487418 None:intergenic
TTGGCCGGAACCCGTGCTAG+AGG 0.556180 4_1:-50483718 Msa0553350:CDS
TAAAATTGCAATTATGGAGA+GGG 0.557454 4_1:-50480816 Msa0553350:three_prime_UTR
CATAACATACATGTTGGCGG+TGG 0.557889 4_1:+50487258 None:intergenic
GCTCATCCCACTCCAAGTAT+GGG 0.558587 4_1:+50481736 None:intergenic
TTGAACTTGACTTACTTACC+AGG 0.562261 4_1:-50483669 Msa0553350:intron
GGCGAGAGTGAGTTTGCCGT+TGG 0.562594 4_1:-50482220 Msa0553350:CDS
AATTGCAATTATGGAGAGGG+AGG 0.563266 4_1:-50480813 Msa0553350:three_prime_UTR
ATCACTAGTGAAGCTTTGGC+CGG 0.564206 4_1:-50483733 Msa0553350:CDS
TTTGATCGAGGGATGTATGC+TGG 0.570243 4_1:-50482265 Msa0553350:CDS
AGAGGATTGATATTTACAGT+AGG 0.570825 4_1:+50484580 None:intergenic
TTGCATAACATACATGTTGG+CGG 0.573535 4_1:+50487255 None:intergenic
GTTCAGAAGTGTTTGATCGA+GGG 0.574223 4_1:-50482276 Msa0553350:intron
TAGTGATGGTCCTCTAGCAC+GGG 0.574761 4_1:+50483708 None:intergenic
TGCCATGAGTTTATGTGTGA+AGG 0.579788 4_1:+50487406 None:intergenic
TTGTGGCTTTCCAACAGAAG+AGG 0.579808 4_1:-50482566 Msa0553350:CDS
TGTTTCTTGAAGTGCCGCGA+TGG 0.581100 4_1:+50485223 None:intergenic
AGCCACAAACTGCAGGACTT+GGG 0.581443 4_1:+50482581 None:intergenic
ACTGTGTTTCCGATAAATGC+CGG 0.585235 4_1:+50484381 None:intergenic
AAGCATACGAAGAAAATTGG+AGG 0.588895 4_1:-50483507 Msa0553350:intron
TCTTGGAAACATGAGGTACA+AGG 0.589561 4_1:+50487324 None:intergenic
GCTGGAACTGGAATAGTGGA+AGG 0.595266 4_1:-50481765 Msa0553350:CDS
AACGTGGTTAGCTTGTCTAA+AGG 0.599085 4_1:-50484557 Msa0553350:intron
GGGATGTATGCTGGACCTGT+TGG 0.600180 4_1:-50482256 Msa0553350:CDS
CAATGCTAACCAAGTTTCCA+GGG 0.601314 4_1:+50486149 None:intergenic
CCTTTGATTCGCGCATATGG+AGG 0.602449 4_1:-50485761 Msa0553350:CDS
AAACGATTGTAGGTTGAAGG+TGG 0.602926 4_1:-50484441 Msa0553350:intron
GAAGCAACCCATACTTGGAG+TGG 0.603898 4_1:-50481743 Msa0553350:CDS
TGTTCAGAAGTGTTTGATCG+AGG 0.604089 4_1:-50482277 Msa0553350:intron
ATAAATGCCGGTGCATTAGG+TGG 0.604297 4_1:+50484393 None:intergenic
AGTAGCATCTAGGAAGCAGA+AGG 0.604523 4_1:+50486197 None:intergenic
GAGTTTAATGAGCTTGAAGG+AGG 0.605355 4_1:-50485305 Msa0553350:CDS
TGTAGTTACCTTGGTAAGTG+AGG 0.606511 4_1:+50484727 None:intergenic
TGTGAGCCACTTGTGTGTAG+TGG 0.608516 4_1:+50487376 None:intergenic
CGTTGTCTCTTGGAAACATG+AGG 0.612604 4_1:+50487317 None:intergenic
AAGGAACAGAAATCTTGCCC+TGG 0.617216 4_1:-50486166 Msa0553350:CDS
GGGATTGGATATCTATAAGG+AGG 0.620357 4_1:-50486075 Msa0553350:intron
AGCATCTAGGAAGCAGAAGG+TGG 0.620967 4_1:+50486200 None:intergenic
AAGCAACCCATACTTGGAGT+GGG 0.621209 4_1:-50481742 Msa0553350:CDS
CCGGTGCATTAGGTGGCTGA+AGG 0.623228 4_1:+50484400 None:intergenic
AAGCTAATGTTTCATCAGAG+TGG 0.624786 4_1:-50485721 Msa0553350:CDS
CAATGCTGACCTGATGCCAA+CGG 0.626025 4_1:+50482204 None:intergenic
AACTCTCACTATGCCAGATG+AGG 0.629562 4_1:+50486276 None:intergenic
CAACCGCCACTACACACAAG+TGG 0.631900 4_1:-50487382 Msa0553350:CDS
AAATGATTCCTCACTTACCA+AGG 0.633006 4_1:-50484735 Msa0553350:intron
AAACTCAGGTTGTTCTAGCG+CGG 0.633096 4_1:-50484618 Msa0553350:intron
TTGCTTAGGAAACTTTACAA+TGG 0.633615 4_1:+50484850 None:intergenic
TGACGGTCTAGTGCTAGTGA+TGG 0.637405 4_1:+50483694 None:intergenic
TGTGTGAAGGAAGAACATGA+GGG 0.641198 4_1:+50487419 None:intergenic
ATAGAAGTTGTGTAAGCACA+AGG 0.643176 4_1:+50480901 None:intergenic
TGGAAGGTTAAGAAACGAAG+AGG 0.647415 4_1:-50482723 Msa0553350:CDS
ATCTGGCATAGTGAGAGTTG+AGG 0.648266 4_1:-50486272 Msa0553350:CDS
TAGATGCTACTTCTCTGGCA+AGG 0.649242 4_1:-50486185 Msa0553350:CDS
AAATGATTAGAAAACTGCCA+AGG 0.653684 4_1:-50482772 Msa0553350:CDS
ATTATCCCAAGCAATAGTAG+TGG 0.661694 4_1:+50485271 None:intergenic
GAGCCACTTGTGTGTAGTGG+CGG 0.661793 4_1:+50487379 None:intergenic
GTGAGAAAGAAAGACAGTGG+TGG 0.672801 4_1:+50487508 None:intergenic
GTCGTGGGAAAAGGCCATCG+CGG 0.682263 4_1:-50485237 Msa0553350:CDS
ATTGCAGCTGATGCTACTGG+TGG 0.696479 4_1:+50486358 None:intergenic
AAAGTGAGAAAGAAAGACAG+TGG 0.696625 4_1:+50487505 None:intergenic
TGACTGCGAAAAGGAAACAG+CGG 0.721026 4_1:+50486114 None:intergenic
TAAATATCAATCCTCTAACG+TGG 0.724878 4_1:-50484573 Msa0553350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTATGTTTTATAAATTT+TGG - chr4_1:50484269-50484288 Msa0553350:intron 10.0%
!!! TTATTTTTTTTCTTTCTTTT+TGG - chr4_1:50484642-50484661 Msa0553350:intron 10.0%
!! TTACATTCTAATAAATTAAA+AGG - chr4_1:50487182-50487201 Msa0553350:intron 10.0%
!! TATCAAATAAAAAACTATAA+GGG + chr4_1:50487505-50487524 None:intergenic 10.0%
!! TTATCAAATAAAAAACTATA+AGG + chr4_1:50487506-50487525 None:intergenic 10.0%
!! AAGAATACAAACTAATTAAA+TGG - chr4_1:50480647-50480666 Msa0553350:three_prime_UTR 15.0%
!! AGAATACAAACTAATTAAAT+GGG - chr4_1:50480648-50480667 Msa0553350:three_prime_UTR 15.0%
!!! TTTAATTAATTTGATACTAG+AGG - chr4_1:50481203-50481222 Msa0553350:intron 15.0%
!! TAAACTATATATAGAATTTG+TGG + chr4_1:50481339-50481358 None:intergenic 15.0%
!! TGTAATTGAAATAAGTTATT+TGG - chr4_1:50481406-50481425 Msa0553350:exon 15.0%
!!! TCAAGTTTTCAAAAAATATT+TGG - chr4_1:50481673-50481692 Msa0553350:intron 15.0%
!!! TTGTAATTTTAATACATTCA+AGG - chr4_1:50482785-50482804 Msa0553350:CDS 15.0%
!! ACTTATATGATAAATGTTTA+TGG - chr4_1:50483255-50483274 Msa0553350:intron 15.0%
!! AAATAGTATGTAATAAGAAT+AGG + chr4_1:50484168-50484187 None:intergenic 15.0%
!! TCATAATATAGTTTCAAAAA+AGG + chr4_1:50484316-50484335 None:intergenic 15.0%
!!! ATTTTTATACTTTTCATTGT+TGG - chr4_1:50484739-50484758 Msa0553350:CDS 15.0%
!! AATAAAAAACATATATGCTT+AGG + chr4_1:50485776-50485795 None:intergenic 15.0%
!!! TATTTTAGAAATTCAAAATG+TGG - chr4_1:50485792-50485811 Msa0553350:intron 15.0%
!!! TAATCTTCAATTTTTTTTAC+CGG - chr4_1:50486362-50486381 Msa0553350:CDS 15.0%
!!! TTTATTTTGTTTCATTTATG+TGG - chr4_1:50486897-50486916 Msa0553350:intron 15.0%
!! AATATTTATGAATGTATCAA+TGG - chr4_1:50486994-50487013 Msa0553350:intron 15.0%
!! ATCAAATAAAAAACTATAAG+GGG + chr4_1:50487504-50487523 None:intergenic 15.0%
!! TTTGTATTCTTCATTTCATT+AGG + chr4_1:50480638-50480657 None:intergenic 20.0%
!! ACATATAAATTGGTTACTAA+TGG + chr4_1:50481021-50481040 None:intergenic 20.0%
!!! AACATTTTTTTGATACCAAA+GGG + chr4_1:50481166-50481185 None:intergenic 20.0%
!!! TAACATTTTTTTGATACCAA+AGG + chr4_1:50481167-50481186 None:intergenic 20.0%
!! TATATGTGTTGAAATATCAA+TGG + chr4_1:50481540-50481559 None:intergenic 20.0%
!!! TTTTTTGAAAACTTGATATC+CGG + chr4_1:50481669-50481688 None:intergenic 20.0%
!!! CTAATAGTCTATTCAAATTT+TGG - chr4_1:50481711-50481730 Msa0553350:intron 20.0%
!! AACTAACTTCATAAATTTCA+AGG + chr4_1:50482182-50482201 None:intergenic 20.0%
!!! ATGAATTTGTTAACTATGTT+TGG - chr4_1:50482204-50482223 Msa0553350:CDS 20.0%
!!! TTGTGAACTATCTATATTTT+GGG + chr4_1:50482271-50482290 None:intergenic 20.0%
!!! TTTGTGAACTATCTATATTT+TGG + chr4_1:50482272-50482291 None:intergenic 20.0%
!! ATTAGAAAATAAGTCATGTT+TGG - chr4_1:50482316-50482335 Msa0553350:intron 20.0%
!!! GTCTTTTGTTACTAATTTTA+TGG + chr4_1:50482749-50482768 None:intergenic 20.0%
!!! TAGATTTTCTTTAGATTATC+AGG - chr4_1:50483287-50483306 Msa0553350:intron 20.0%
!! GTGTTATCTTAAATAAAATG+CGG - chr4_1:50483727-50483746 Msa0553350:CDS 20.0%
!! ATATCTTAAAAGTCATCATA+AGG - chr4_1:50484335-50484354 Msa0553350:intron 20.0%
!! TCAGAATATAGTTTCAAAAA+AGG + chr4_1:50484368-50484387 None:intergenic 20.0%
!! CAAGTTCAGAAAAATTAAAA+TGG + chr4_1:50484422-50484441 None:intergenic 20.0%
!!! GTACAATGATATTTGTTTTT+AGG - chr4_1:50484886-50484905 Msa0553350:intron 20.0%
!! ATTGATGTCTTCAAAAAAAA+GGG + chr4_1:50484931-50484950 None:intergenic 20.0%
!! AATTGATGTCTTCAAAAAAA+AGG + chr4_1:50484932-50484951 None:intergenic 20.0%
!! GAAATTGTGAATTTAGAAAT+GGG + chr4_1:50484995-50485014 None:intergenic 20.0%
!!! GTTTTCCTTATTTACTATTT+TGG + chr4_1:50485145-50485164 None:intergenic 20.0%
!!! AATTTTTAGAATTAAGCTGT+TGG - chr4_1:50485207-50485226 Msa0553350:intron 20.0%
!!! AGTTTTCTAATCATTTTCTT+TGG + chr4_1:50485440-50485459 None:intergenic 20.0%
!! TTAATTGAGCAAATAAATGT+TGG + chr4_1:50485472-50485491 None:intergenic 20.0%
!! TAAATGACAACTTAGTTATA+TGG + chr4_1:50485586-50485605 None:intergenic 20.0%
!!! TTTTGTCTATGTTCAAAAAT+GGG + chr4_1:50485869-50485888 None:intergenic 20.0%
!!! TTTTTGTCTATGTTCAAAAA+TGG + chr4_1:50485870-50485889 None:intergenic 20.0%
!! ATTGTCCTTACTATAAAATA+CGG - chr4_1:50485916-50485935 Msa0553350:intron 20.0%
!!! CGATAATATTTTATACTACT+TGG + chr4_1:50486155-50486174 None:intergenic 20.0%
!! AAAATATTATCGTATCTACT+AGG - chr4_1:50486163-50486182 Msa0553350:CDS 20.0%
!!! TTAATTGAGATCCTATTTTT+TGG - chr4_1:50486206-50486225 Msa0553350:CDS 20.0%
!!! TACATGTACTTTTTTTTTTG+CGG + chr4_1:50486623-50486642 None:intergenic 20.0%
!!! AGTTCAAATTTGATAATACA+TGG + chr4_1:50487208-50487227 None:intergenic 20.0%
!!! TTTCTTTGCTTTAGATATTA+TGG - chr4_1:50487289-50487308 Msa0553350:CDS 20.0%
!! ATATAATACAACATGTACTA+TGG + chr4_1:50487473-50487492 None:intergenic 20.0%
! ACAAACTTTATCAACACAAA+TGG - chr4_1:50480860-50480879 Msa0553350:three_prime_UTR 25.0%
!! ACTAATGGATAACAAAAAGA+TGG + chr4_1:50481006-50481025 None:intergenic 25.0%
! TTGCATTGTTATGTGAATTA+AGG - chr4_1:50481139-50481158 Msa0553350:intron 25.0%
! ATTTACGAAGAGTTTATTCA+TGG - chr4_1:50481271-50481290 Msa0553350:intron 25.0%
!!! TCCATATCGACTTATAATTT+GGG - chr4_1:50481442-50481461 Msa0553350:CDS 25.0%
!!! CATTTAACTGTCATTTTAGA+TGG - chr4_1:50481478-50481497 Msa0553350:intron 25.0%
! TAATAATCAAAAGCTTGAGT+CGG - chr4_1:50481635-50481654 Msa0553350:intron 25.0%
! AAAATATCAAATAGTAGCTG+TGG + chr4_1:50482389-50482408 None:intergenic 25.0%
!! GTTGAAAATTTTCACTTTGA+AGG - chr4_1:50482414-50482433 Msa0553350:intron 25.0%
! GTTCTTTCCAAAAACTAATT+TGG - chr4_1:50482567-50482586 Msa0553350:CDS 25.0%
! ACTAAGGAAAGAAACATTTA+GGG + chr4_1:50482653-50482672 None:intergenic 25.0%
! AGTAACAAAAGACATATCTA+AGG - chr4_1:50482756-50482775 Msa0553350:CDS 25.0%
! AAATGAGTAAATCATCAGTT+TGG + chr4_1:50482843-50482862 None:intergenic 25.0%
! GATTTACTCATTTATAGCAT+TGG - chr4_1:50482850-50482869 Msa0553350:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG + chr4_1:50483133-50483152 None:intergenic 25.0%
!!! ATCTCATGCTTTTTCTTTAT+TGG - chr4_1:50483511-50483530 Msa0553350:CDS 25.0%
! ATTTGACGGAGAAAAAAAAA+AGG + chr4_1:50483701-50483720 None:intergenic 25.0%
!! TATATGTTTTCTTTTGAACC+AGG - chr4_1:50484129-50484148 Msa0553350:intron 25.0%
!! ATATGTTTTCTTTTGAACCA+GGG - chr4_1:50484130-50484149 Msa0553350:intron 25.0%
! ATCATGTGAAATTCATTATG+TGG + chr4_1:50484230-50484249 None:intergenic 25.0%
! AATAAAAATCACAAGCATCA+GGG + chr4_1:50484627-50484646 None:intergenic 25.0%
! AAATAAAAATCACAAGCATC+AGG + chr4_1:50484628-50484647 None:intergenic 25.0%
! AACAAAATCTAACGTACATT+AGG + chr4_1:50484788-50484807 None:intergenic 25.0%
! TATAATAGACATGCAATAGA+TGG - chr4_1:50484843-50484862 Msa0553350:CDS 25.0%
! GGAAATTGTGAATTTAGAAA+TGG + chr4_1:50484996-50485015 None:intergenic 25.0%
! CAATATCATCGAAATGTATA+GGG + chr4_1:50485053-50485072 None:intergenic 25.0%
! TCAATATCATCGAAATGTAT+AGG + chr4_1:50485054-50485073 None:intergenic 25.0%
! TTGAAATTGAAATGCTTATG+TGG - chr4_1:50485070-50485089 Msa0553350:intron 25.0%
! TAGTAAATAAGGAAAACTAG+AGG - chr4_1:50485148-50485167 Msa0553350:intron 25.0%
! CATTTATTTGCTCAATTAAC+TGG - chr4_1:50485473-50485492 Msa0553350:intron 25.0%
!! TTTTTACTTGAACTGTAACA+TGG + chr4_1:50485528-50485547 None:intergenic 25.0%
! AGAACAAGTAGGAAAATATT+TGG + chr4_1:50485738-50485757 None:intergenic 25.0%
! CTTGTAATAAAGTCAAAGTT+AGG - chr4_1:50485820-50485839 Msa0553350:intron 25.0%
! TTAGGTGATATTGATATGTT+TGG - chr4_1:50485838-50485857 Msa0553350:intron 25.0%
!! AACATCTGTTGTTTGAAATA+CGG - chr4_1:50486123-50486142 Msa0553350:CDS 25.0%
! AAATAGGATCTCAATTAACT+TGG + chr4_1:50486204-50486223 None:intergenic 25.0%
!! AATTGGTTGATTTATAGTAG+CGG - chr4_1:50486240-50486259 Msa0553350:CDS 25.0%
!!! GAGTATTGAGATACTAATAA+TGG + chr4_1:50486338-50486357 None:intergenic 25.0%
!! ACATTTGCAAGTTTTCATAT+AGG - chr4_1:50486408-50486427 Msa0553350:CDS 25.0%
!! ATGTGAATGCATACATATTT+TGG - chr4_1:50486529-50486548 Msa0553350:intron 25.0%
! ACATGTATCTGATTCAAATT+TGG + chr4_1:50486652-50486671 None:intergenic 25.0%
! TATGTATTAATATCTCACAG+CGG + chr4_1:50487056-50487075 None:intergenic 25.0%
!! TAATTTAGAGCTTCTCTAAA+TGG + chr4_1:50487156-50487175 None:intergenic 25.0%
!! CCATAATTGCAATTTTATTG+AGG + chr4_1:50487397-50487416 None:intergenic 25.0%
! CCTCAATAAAATTGCAATTA+TGG - chr4_1:50487394-50487413 Msa0553350:exon 25.0%
! ATAAAATTGCAATTATGGAG+AGG - chr4_1:50487399-50487418 Msa0553350:exon 25.0%
! TAAAATTGCAATTATGGAGA+GGG - chr4_1:50487400-50487419 Msa0553350:exon 25.0%
!! CATTACTTTAAGAACAACTT+TGG + chr4_1:50487587-50487606 None:intergenic 25.0%
TGTTTCAAAGTGATATGGTT+TGG + chr4_1:50480678-50480697 None:intergenic 30.0%
!! GTTGTTGTTTCAAAGTGATA+TGG + chr4_1:50480683-50480702 None:intergenic 30.0%
AGTTTGCATAACATACATGT+TGG + chr4_1:50480967-50480986 None:intergenic 30.0%
GTTGCAACACACATATAAAT+TGG + chr4_1:50481031-50481050 None:intergenic 30.0%
!! CTCCATATCGACTTATAATT+TGG - chr4_1:50481441-50481460 Msa0553350:CDS 30.0%
TCCCAAATTATAAGTCGATA+TGG + chr4_1:50481446-50481465 None:intergenic 30.0%
!! TATCGACTTATAATTTGGGA+TGG - chr4_1:50481446-50481465 Msa0553350:CDS 30.0%
! AGCAAATTGACTTTCAAAGT+AGG + chr4_1:50481610-50481629 None:intergenic 30.0%
CTTTACAACCATTCATTGAA+AGG + chr4_1:50481779-50481798 None:intergenic 30.0%
TCAATGAATGGTTGTAAAGA+AGG - chr4_1:50481780-50481799 Msa0553350:CDS 30.0%
TATAGATATCCAATCCCAAT+AGG + chr4_1:50482138-50482157 None:intergenic 30.0%
ATTGGGATTGGATATCTATA+AGG - chr4_1:50482138-50482157 Msa0553350:intron 30.0%
TCATAAATTTCAAGGAACCA+AGG + chr4_1:50482174-50482193 None:intergenic 30.0%
AAGCATTAACAGTTTGATTC+AGG + chr4_1:50482245-50482264 None:intergenic 30.0%
GAAAATAAGTCATGTTTGGT+TGG - chr4_1:50482320-50482339 Msa0553350:intron 30.0%
!!! CATTAGCTTTTGCATTGAAA+CGG + chr4_1:50482484-50482503 None:intergenic 30.0%
!! TAGTTTTTGGAAAGAACACA+GGG + chr4_1:50482564-50482583 None:intergenic 30.0%
!! TTAGTTTTTGGAAAGAACAC+AGG + chr4_1:50482565-50482584 None:intergenic 30.0%
!!! TGAAGGACCAAATTAGTTTT+TGG + chr4_1:50482577-50482596 None:intergenic 30.0%
CACTAAGGAAAGAAACATTT+AGG + chr4_1:50482654-50482673 None:intergenic 30.0%
! GTGTCTTTTGTTAGTTAGTT+TGG - chr4_1:50482690-50482709 Msa0553350:intron 30.0%
!!! TCAACCTGTCAATTTTTTCT+CGG + chr4_1:50482893-50482912 None:intergenic 30.0%
ACTTTGCAAAGTAAGTGTTA+GGG - chr4_1:50483015-50483034 Msa0553350:intron 30.0%
TCAAAAAAGTCAATCCAAAC+AGG + chr4_1:50483041-50483060 None:intergenic 30.0%
TAAACACATTCAAGACTGTT+TGG - chr4_1:50483076-50483095 Msa0553350:intron 30.0%
AAACACATTCAAGACTGTTT+GGG - chr4_1:50483077-50483096 Msa0553350:intron 30.0%
TTGCTTAGGAAACTTTACAA+TGG + chr4_1:50483369-50483388 None:intergenic 30.0%
CTTCTTTACTAGGAATGTTA+TGG + chr4_1:50483418-50483437 None:intergenic 30.0%
ACATTCCTAGTAAAGAAGAT+TGG - chr4_1:50483420-50483439 Msa0553350:intron 30.0%
AGATTCCAATCTTCTTTACT+AGG + chr4_1:50483428-50483447 None:intergenic 30.0%
GAAGAAAATGAGCTTTCAAA+TGG + chr4_1:50483567-50483586 None:intergenic 30.0%
! CTCATTTTCTTCTTCCATAT+TGG - chr4_1:50483575-50483594 Msa0553350:intron 30.0%
AGAGGATTGATATTTACAGT+AGG + chr4_1:50483639-50483658 None:intergenic 30.0%
TAAATATCAATCCTCTAACG+TGG - chr4_1:50483643-50483662 Msa0553350:intron 30.0%
CTTAAATAAAATGCGGTAGA+AGG - chr4_1:50483734-50483753 Msa0553350:CDS 30.0%
GTATACATCAAAACGATTGT+AGG - chr4_1:50483765-50483784 Msa0553350:CDS 30.0%
! ACACCCTTATCTTTTTATGT+CGG - chr4_1:50483897-50483916 Msa0553350:intron 30.0%
TACCCGACATAAAAAGATAA+GGG + chr4_1:50483903-50483922 None:intergenic 30.0%
ATACCCGACATAAAAAGATA+AGG + chr4_1:50483904-50483923 None:intergenic 30.0%
! TTATCTTTTTATGTCGGGTA+TGG - chr4_1:50483903-50483922 Msa0553350:intron 30.0%
! TATCTTTTTATGTCGGGTAT+GGG - chr4_1:50483904-50483923 Msa0553350:intron 30.0%
CTCATAGTTTACTGATAAGT+GGG - chr4_1:50483934-50483953 Msa0553350:intron 30.0%
AAGTTGTATTATGTAACCCT+AGG - chr4_1:50484005-50484024 Msa0553350:intron 30.0%
! TTTTCTATTATCCAAGCCTA+GGG + chr4_1:50484024-50484043 None:intergenic 30.0%
! ATTTTCTATTATCCAAGCCT+AGG + chr4_1:50484025-50484044 None:intergenic 30.0%
TCTTAAAAGTCATCATAAGG+AGG - chr4_1:50484338-50484357 Msa0553350:intron 30.0%
AGCAACTATTTCACAGAAAA+TGG - chr4_1:50484454-50484473 Msa0553350:intron 30.0%
GTAAGTCAAGTTCAATTTGA+CGG + chr4_1:50484542-50484561 None:intergenic 30.0%
! AGAAAGCATACGAAGAAAAT+TGG - chr4_1:50484706-50484725 Msa0553350:intron 30.0%
!!! ATGTTTTTTCCTCAAATCCT+TGG - chr4_1:50484813-50484832 Msa0553350:CDS 30.0%
GTCTATTATATCAGTATCCA+AGG + chr4_1:50484833-50484852 None:intergenic 30.0%
! TTAGGCTTGAATCACAATTT+TGG - chr4_1:50484904-50484923 Msa0553350:intron 30.0%
! AACTGTCTCAATCACAATTT+TGG - chr4_1:50484966-50484985 Msa0553350:intron 30.0%
! TCCATCCACAATTTTCAAAA+TGG - chr4_1:50485013-50485032 Msa0553350:intron 30.0%
!! TCCATTTTGAAAATTGTGGA+TGG + chr4_1:50485017-50485036 None:intergenic 30.0%
!! GTCATCCATTTTGAAAATTG+TGG + chr4_1:50485021-50485040 None:intergenic 30.0%
AAATTCATCGCATAGAAACA+AGG + chr4_1:50485192-50485211 None:intergenic 30.0%
GGATTATACATAATAGCATG+AGG + chr4_1:50485233-50485252 None:intergenic 30.0%
AAATGATTAGAAAACTGCCA+AGG - chr4_1:50485444-50485463 Msa0553350:intron 30.0%
TATTTGCTCAATTAACTGGA+AGG - chr4_1:50485477-50485496 Msa0553350:intron 30.0%
AAACAACGATGTATGGAAAA+TGG + chr4_1:50485706-50485725 None:intergenic 30.0%
GTATTAGAAACAACGATGTA+TGG + chr4_1:50485713-50485732 None:intergenic 30.0%
! TTTTCCTACTTGTTCTTGAA+AGG - chr4_1:50485742-50485761 Msa0553350:CDS 30.0%
! GAACACCGTATTTTATAGTA+AGG + chr4_1:50485924-50485943 None:intergenic 30.0%
!! AAGTAAACTCTGAAATTTCC+AGG - chr4_1:50486300-50486319 Msa0553350:CDS 30.0%
!! TAATGGATTACTGAAATTCC+TGG + chr4_1:50486321-50486340 None:intergenic 30.0%
! CAAGTTTTCATATAGGAACT+AGG - chr4_1:50486415-50486434 Msa0553350:CDS 30.0%
GTTCACTAAGTTACTTAAAC+TGG - chr4_1:50486772-50486791 Msa0553350:intron 30.0%
! CTACAAACCTTATTTGTTGA+TGG + chr4_1:50486836-50486855 None:intergenic 30.0%
TATACTTGAATTTCGCATTC+TGG + chr4_1:50487244-50487263 None:intergenic 30.0%
! GAGTGTTATTCCAATTGATA+CGG - chr4_1:50487357-50487376 Msa0553350:CDS 30.0%
!! TCAAAGTGATATGGTTTGGT+GGG + chr4_1:50480674-50480693 None:intergenic 35.0%
! TTCAAAGTGATATGGTTTGG+TGG + chr4_1:50480675-50480694 None:intergenic 35.0%
AAAGTGAGAAAGAAAGACAG+TGG + chr4_1:50480714-50480733 None:intergenic 35.0%
TTCCTTCACACATAAACTCA+TGG - chr4_1:50480808-50480827 Msa0553350:three_prime_UTR 35.0%
TTGCATAACATACATGTTGG+CGG + chr4_1:50480964-50480983 None:intergenic 35.0%
TATGTGAATTAAGGACCCTT+TGG - chr4_1:50481148-50481167 Msa0553350:intron 35.0%
TGATACTAGAGGCTTATTTG+AGG - chr4_1:50481214-50481233 Msa0553350:intron 35.0%
! TCGTAAATAGTCTTACAGAC+AGG + chr4_1:50481259-50481278 None:intergenic 35.0%
! GACTTATAATTTGGGATGGA+GGG - chr4_1:50481450-50481469 Msa0553350:intron 35.0%
!!! ACTGTCATTTTAGATGGCAA+AGG - chr4_1:50481484-50481503 Msa0553350:intron 35.0%
TGTTCAGAGACCTATTTGTA+AGG - chr4_1:50481746-50481765 Msa0553350:CDS 35.0%
GTTCAGAGACCTATTTGTAA+GGG - chr4_1:50481747-50481766 Msa0553350:CDS 35.0%
AAAGTTCAAGAGAACCAGTT+AGG - chr4_1:50481814-50481833 Msa0553350:intron 35.0%
! AGCAAGTTGAAGCAATTGAT+TGG - chr4_1:50481979-50481998 Msa0553350:intron 35.0%
ATCCAATCCCAATAGGAAAA+TGG + chr4_1:50482131-50482150 None:intergenic 35.0%
TATAAGGAGGTAATTCACCT+TGG - chr4_1:50482154-50482173 Msa0553350:intron 35.0%
AAGCTAATGTTTCATCAGAG+TGG - chr4_1:50482495-50482514 Msa0553350:intron 35.0%
TAATGTTTCATCAGAGTGGA+TGG - chr4_1:50482499-50482518 Msa0553350:intron 35.0%
TTTCTACTTCATGATTCCTC+AGG - chr4_1:50482532-50482551 Msa0553350:intron 35.0%
AACAACGTTTGACACATTGA+AGG + chr4_1:50482594-50482613 None:intergenic 35.0%
GTTTCTTTCCTTAGTGAGTT+TGG - chr4_1:50482658-50482677 Msa0553350:intron 35.0%
TTCAAAGACCAAACTCACTA+AGG + chr4_1:50482669-50482688 None:intergenic 35.0%
GTTGAGTTTAATGAGCTTGA+AGG - chr4_1:50482908-50482927 Msa0553350:intron 35.0%
ATTATCCCAAGCAATAGTAG+TGG + chr4_1:50482948-50482967 None:intergenic 35.0%
CTTGGGATAATGATCTTTGT+TGG - chr4_1:50482957-50482976 Msa0553350:intron 35.0%
ATAATGATCTTTGTTGGTCG+TGG - chr4_1:50482963-50482982 Msa0553350:intron 35.0%
TAATGATCTTTGTTGGTCGT+GGG - chr4_1:50482964-50482983 Msa0553350:intron 35.0%
CACTTTGCAAAGTAAGTGTT+AGG - chr4_1:50483014-50483033 Msa0553350:intron 35.0%
TCTTTAGATTATCAGGACTC+AGG - chr4_1:50483294-50483313 Msa0553350:intron 35.0%
ACTATGCATCTTTGTATTGC+AGG - chr4_1:50483334-50483353 Msa0553350:intron 35.0%
CTGCTTAATATCAATGTTGG+AGG + chr4_1:50483395-50483414 None:intergenic 35.0%
TGGCTGCTTAATATCAATGT+TGG + chr4_1:50483398-50483417 None:intergenic 35.0%
AAATGATTCCTCACTTACCA+AGG - chr4_1:50483481-50483500 Msa0553350:intron 35.0%
TTCTTCCATATTGGAAACTC+AGG - chr4_1:50483584-50483603 Msa0553350:intron 35.0%
AACAACCTGAGTTTCCAATA+TGG + chr4_1:50483592-50483611 None:intergenic 35.0%
GATAACACTGCTGAATTTGA+CGG + chr4_1:50483715-50483734 None:intergenic 35.0%
! TCAAAACGATTGTAGGTTGA+AGG - chr4_1:50483772-50483791 Msa0553350:intron 35.0%
AATCTTCCTAGTCACATACA+TGG + chr4_1:50483868-50483887 None:intergenic 35.0%
! CACCCTTATCTTTTTATGTC+GGG - chr4_1:50483898-50483917 Msa0553350:intron 35.0%
GCTCATAGTTTACTGATAAG+TGG - chr4_1:50483933-50483952 Msa0553350:intron 35.0%
AGTTTACTGATAAGTGGGTA+TGG - chr4_1:50483939-50483958 Msa0553350:intron 35.0%
CTATATATCCAACTGCAGAA+TGG + chr4_1:50484056-50484075 None:intergenic 35.0%
CATTCTGCAGTTGGATATAT+AGG - chr4_1:50484054-50484073 Msa0553350:intron 35.0%
CAAAGAACACTCATTTAGCA+TGG + chr4_1:50484095-50484114 None:intergenic 35.0%
TTTCTGTGAAATAGTTGCTC+TGG + chr4_1:50484453-50484472 None:intergenic 35.0%
TTGAACTTGACTTACTTACC+AGG - chr4_1:50484547-50484566 Msa0553350:intron 35.0%
TATCAAAGTCCTAAGCAACA+AGG + chr4_1:50484577-50484596 None:intergenic 35.0%
!!! TTTTTGGTTATACAGTCCGA+AGG - chr4_1:50484658-50484677 Msa0553350:intron 35.0%
AAGCATACGAAGAAAATTGG+AGG - chr4_1:50484709-50484728 Msa0553350:intron 35.0%
TATCAGTATCCAAGGATTTG+AGG + chr4_1:50484825-50484844 None:intergenic 35.0%
ATAGACATGCAATAGATGGA+AGG - chr4_1:50484847-50484866 Msa0553350:CDS 35.0%
ATCATCGAAATGTATAGGGT+GGG + chr4_1:50485049-50485068 None:intergenic 35.0%
TATCATCGAAATGTATAGGG+TGG + chr4_1:50485050-50485069 None:intergenic 35.0%
AGGGGCCAAAATAGTAAATA+AGG - chr4_1:50485137-50485156 Msa0553350:intron 35.0%
TGTATAATCCAACCCTAGAT+TGG - chr4_1:50485243-50485262 Msa0553350:CDS 35.0%
ACTTCCAAAGTTCCAATCTA+GGG + chr4_1:50485258-50485277 None:intergenic 35.0%
TGAAATAGCATGTTGAGTGT+TGG + chr4_1:50485295-50485314 None:intergenic 35.0%
ATGATTGTAAGCAGATGCAA+TGG + chr4_1:50485330-50485349 None:intergenic 35.0%
! CAATCATTTTAGACCTTCCT+AGG - chr4_1:50485343-50485362 Msa0553350:intron 35.0%
ATTCATCATCCTGTTAACCT+AGG + chr4_1:50485363-50485382 None:intergenic 35.0%
GCAAATAAATGTTGGATCCT+TGG + chr4_1:50485464-50485483 None:intergenic 35.0%
!!! AGAGGCACAAGTTTTAATTG+CGG - chr4_1:50485668-50485687 Msa0553350:intron 35.0%
!!! CAAGTTTTAATTGCGGAAAC+AGG - chr4_1:50485675-50485694 Msa0553350:intron 35.0%
AAGTCCTTTCAAGAACAAGT+AGG + chr4_1:50485749-50485768 None:intergenic 35.0%
ATGTCACATTCAGTTTGCAT+AGG - chr4_1:50486067-50486086 Msa0553350:intron 35.0%
CTTGTTCGTCTCCAAAAAAT+AGG + chr4_1:50486220-50486239 None:intergenic 35.0%
!! TTTTGGAGACGAACAAGAAT+TGG - chr4_1:50486223-50486242 Msa0553350:CDS 35.0%
ATTCGTGGTAAAAAACAGTC+CGG + chr4_1:50486384-50486403 None:intergenic 35.0%
CTTGCAAATGTTATGATTCG+TGG + chr4_1:50486399-50486418 None:intergenic 35.0%
! AGCAATCTTTTTGCAGTGAA+TGG + chr4_1:50486567-50486586 None:intergenic 35.0%
!!! CAATCTACTTTTTGTCTCAG+AGG + chr4_1:50486803-50486822 None:intergenic 35.0%
ATGAGCTCCATCAACAAATA+AGG - chr4_1:50486826-50486845 Msa0553350:intron 35.0%
!! ACATACTAAGTGTTGAGAAG+TGG + chr4_1:50487090-50487109 None:intergenic 35.0%
ATAGAAGTTGTGTAAGCACA+AGG + chr4_1:50487318-50487337 None:intergenic 35.0%
AACATGAGGGAGATGGAAAA+TGG + chr4_1:50480787-50480806 None:intergenic 40.0%
TGTGTGAAGGAAGAACATGA+GGG + chr4_1:50480800-50480819 None:intergenic 40.0%
ATGTGTGAAGGAAGAACATG+AGG + chr4_1:50480801-50480820 None:intergenic 40.0%
TGCCATGAGTTTATGTGTGA+AGG + chr4_1:50480813-50480832 None:intergenic 40.0%
TCTTGGAAACATGAGGTACA+AGG + chr4_1:50480895-50480914 None:intergenic 40.0%
ATGTTGTTGTCGTTGTCTCT+TGG + chr4_1:50480912-50480931 None:intergenic 40.0%
TCATGTTGTGTTCAGTGCAT+TGG + chr4_1:50481061-50481080 None:intergenic 40.0%
! CGACTTATAATTTGGGATGG+AGG - chr4_1:50481449-50481468 Msa0553350:intron 40.0%
AGGTAGCATCCCTTACAAAT+AGG + chr4_1:50481759-50481778 None:intergenic 40.0%
GGATGCTACCTTTCAATGAA+TGG - chr4_1:50481768-50481787 Msa0553350:CDS 40.0%
GGCTATGTACAGTCTCAAAA+TGG - chr4_1:50481881-50481900 Msa0553350:intron 40.0%
! TCTCCATTTTGTACCTCATC+TGG - chr4_1:50481927-50481946 Msa0553350:intron 40.0%
ATGCCAGATGAGGTACAAAA+TGG + chr4_1:50481933-50481952 None:intergenic 40.0%
CAATGCTAACCAAGTTTCCA+GGG + chr4_1:50482070-50482089 None:intergenic 40.0%
!! AGTCACAGCCATTTTCCTAT+TGG - chr4_1:50482120-50482139 Msa0553350:intron 40.0%
!! GTCACAGCCATTTTCCTATT+GGG - chr4_1:50482121-50482140 Msa0553350:intron 40.0%
!! AGCCATTTTCCTATTGGGAT+TGG - chr4_1:50482126-50482145 Msa0553350:intron 40.0%
GGGATTGGATATCTATAAGG+AGG - chr4_1:50482141-50482160 Msa0553350:intron 40.0%
AATAGTAGCTGTGGCATAGA+AGG + chr4_1:50482380-50482399 None:intergenic 40.0%
TGACACTACCTCACACATTT+AGG - chr4_1:50482815-50482834 Msa0553350:intron 40.0%
GACACTACCTCACACATTTA+GGG - chr4_1:50482816-50482835 Msa0553350:intron 40.0%
CTAGCCGAGAAAAAATTGAC+AGG - chr4_1:50482886-50482905 Msa0553350:intron 40.0%
GAGTTTAATGAGCTTGAAGG+AGG - chr4_1:50482911-50482930 Msa0553350:intron 40.0%
TGCTTACCACTACTATTGCT+TGG - chr4_1:50482939-50482958 Msa0553350:intron 40.0%
GCTTACCACTACTATTGCTT+GGG - chr4_1:50482940-50482959 Msa0553350:intron 40.0%
ACTGTTTGGGAGAGCTTAAT+TGG - chr4_1:50483090-50483109 Msa0553350:intron 40.0%
! CTTATTTCCACAAGCTCTGA+AGG - chr4_1:50483147-50483166 Msa0553350:intron 40.0%
TTAGATTATCAGGACTCAGG+AGG - chr4_1:50483297-50483316 Msa0553350:intron 40.0%
TGTAGTTACCTTGGTAAGTG+AGG + chr4_1:50483492-50483511 None:intergenic 40.0%
AGCATGAGATGTAGTTACCT+TGG + chr4_1:50483501-50483520 None:intergenic 40.0%
!! AACGTGGTTAGCTTGTCTAA+AGG - chr4_1:50483659-50483678 Msa0553350:intron 40.0%
!! GTTAGCTTGTCTAAAGGTAC+TGG - chr4_1:50483665-50483684 Msa0553350:intron 40.0%
! AAACGATTGTAGGTTGAAGG+TGG - chr4_1:50483775-50483794 Msa0553350:intron 40.0%
TAGGTGGCTGAAGGAAAAAT+TGG + chr4_1:50483810-50483829 None:intergenic 40.0%
ACTGTGTTTCCGATAAATGC+CGG + chr4_1:50483838-50483857 None:intergenic 40.0%
AGTATGCCATGTATGTGACT+AGG - chr4_1:50483859-50483878 Msa0553350:intron 40.0%
TGATAAGTGGGTATGGTTCA+GGG - chr4_1:50483946-50483965 Msa0553350:intron 40.0%
GTATTATGTAACCCTAGGCT+TGG - chr4_1:50484010-50484029 Msa0553350:intron 40.0%
ATAGGTTAGAACAACAACCC+TGG + chr4_1:50484150-50484169 None:intergenic 40.0%
CCAAAGCTTCACTAGTGATA+TGG + chr4_1:50484482-50484501 None:intergenic 40.0%
CCATATCACTAGTGAAGCTT+TGG - chr4_1:50484479-50484498 Msa0553350:intron 40.0%
GTAAACTCAATGTCGTCCTT+CGG + chr4_1:50484677-50484696 None:intergenic 40.0%
TCTAGGCAGATTCTCACTTA+GGG - chr4_1:50485118-50485137 Msa0553350:intron 40.0%
GACTTCCAAAGTTCCAATCT+AGG + chr4_1:50485259-50485278 None:intergenic 40.0%
TTAGACCTTCCTAGGTTAAC+AGG - chr4_1:50485351-50485370 Msa0553350:intron 40.0%
ATCATCCTGTTAACCTAGGA+AGG + chr4_1:50485359-50485378 None:intergenic 40.0%
GAAAACAAGCGCGTAGTTAA+AGG + chr4_1:50485386-50485405 None:intergenic 40.0%
TGGAAGGTTAAGAAACGAAG+AGG - chr4_1:50485493-50485512 Msa0553350:intron 40.0%
GTTAAGAAACGAAGAGGATG+AGG - chr4_1:50485499-50485518 Msa0553350:intron 40.0%
AAAACTTGTGCCTCTTCTGT+TGG + chr4_1:50485663-50485682 None:intergenic 40.0%
! GTTTTCACTTCAACTCGCTT+TGG - chr4_1:50485890-50485909 Msa0553350:intron 40.0%
!! TGTTCAGAAGTGTTTGATCG+AGG - chr4_1:50485939-50485958 Msa0553350:intron 40.0%
!! GTTCAGAAGTGTTTGATCGA+GGG - chr4_1:50485940-50485959 Msa0553350:intron 40.0%
CTAGGTGCTTTGATATATGC+TGG - chr4_1:50486433-50486452 Msa0553350:CDS 40.0%
GCTTTGATATATGCTGGAAC+TGG - chr4_1:50486439-50486458 Msa0553350:CDS 40.0%
ATATGCTGGAACTGGAATAG+TGG - chr4_1:50486447-50486466 Msa0553350:CDS 40.0%
GCTAGAACTCAAAACATCTC+AGG - chr4_1:50486501-50486520 Msa0553350:intron 40.0%
CCGCTATTTGACAACACTAT+CGG + chr4_1:50486721-50486740 None:intergenic 40.0%
CCGATAGTGTTGTCAAATAG+CGG - chr4_1:50486718-50486737 Msa0553350:intron 40.0%
ATTCCAATTGATACGGAGCA+TGG - chr4_1:50487364-50487383 Msa0553350:CDS 40.0%
AATTGCAATTATGGAGAGGG+AGG - chr4_1:50487403-50487422 Msa0553350:exon 40.0%
GAGGAGATTTGGACCAAATT+GGG - chr4_1:50487422-50487441 Msa0553350:five_prime_UTR 40.0%
AGTCAAATGAGCACCCAATT+TGG + chr4_1:50487438-50487457 None:intergenic 40.0%
GTGAGAAAGAAAGACAGTGG+TGG + chr4_1:50480711-50480730 None:intergenic 45.0%
AAGGAAGAACATGAGGGAGA+TGG + chr4_1:50480794-50480813 None:intergenic 45.0%
CGTTGTCTCTTGGAAACATG+AGG + chr4_1:50480902-50480921 None:intergenic 45.0%
CATAACATACATGTTGGCGG+TGG + chr4_1:50480961-50480980 None:intergenic 45.0%
TGTTGTGTTCAGTGCATTGG+TGG + chr4_1:50481058-50481077 None:intergenic 45.0%
AAAAGCTTGAGTCGGTCGTT+GGG - chr4_1:50481643-50481662 Msa0553350:intron 45.0%
AACTCTCACTATGCCAGATG+AGG + chr4_1:50481943-50481962 None:intergenic 45.0%
ATCTGGCATAGTGAGAGTTG+AGG - chr4_1:50481944-50481963 Msa0553350:intron 45.0%
GAGAGTTGAGGTTCCTATTG+AGG - chr4_1:50481956-50481975 Msa0553350:intron 45.0%
! GCTTCAACTTGCTCCTCAAT+AGG + chr4_1:50481972-50481991 None:intergenic 45.0%
AGTAGCATCTAGGAAGCAGA+AGG + chr4_1:50482022-50482041 None:intergenic 45.0%
! CTTCCTAGATGCTACTTCTC+TGG - chr4_1:50482026-50482045 Msa0553350:intron 45.0%
TTGCCAGAGAAGTAGCATCT+AGG + chr4_1:50482032-50482051 None:intergenic 45.0%
! TAGATGCTACTTCTCTGGCA+AGG - chr4_1:50482031-50482050 Msa0553350:intron 45.0%
AAGGAACAGAAATCTTGCCC+TGG - chr4_1:50482050-50482069 Msa0553350:intron 45.0%
GAAATCTTGCCCTGGAAACT+TGG - chr4_1:50482058-50482077 Msa0553350:intron 45.0%
GCAATGCTAACCAAGTTTCC+AGG + chr4_1:50482071-50482090 None:intergenic 45.0%
GGAAACTTGGTTAGCATTGC+TGG - chr4_1:50482071-50482090 Msa0553350:intron 45.0%
TTGGTTAGCATTGCTGGTGT+TGG - chr4_1:50482077-50482096 Msa0553350:intron 45.0%
TGACTGCGAAAAGGAAACAG+CGG + chr4_1:50482105-50482124 None:intergenic 45.0%
AAATGGCTGTGACTGCGAAA+AGG + chr4_1:50482114-50482133 None:intergenic 45.0%
CTCCATATGCGCGAATCAAA+GGG + chr4_1:50482457-50482476 None:intergenic 45.0%
! TCATCAGAGTGGATGGCTTT+TGG - chr4_1:50482506-50482525 Msa0553350:intron 45.0%
! TGTGTGAGGTAGTGTCACTA+TGG + chr4_1:50482812-50482831 None:intergenic 45.0%
GTTTGGTCCCTAAATGTGTG+AGG + chr4_1:50482826-50482845 None:intergenic 45.0%
TCTTTGTTGGTCGTGGGAAA+AGG - chr4_1:50482970-50482989 Msa0553350:intron 45.0%
AGTAAGTGTTAGGGCCTGTT+TGG - chr4_1:50483024-50483043 Msa0553350:intron 45.0%
! AATGTTGGAGGAGCTTGCTT+AGG + chr4_1:50483383-50483402 None:intergenic 45.0%
! AAACTCAGGTTGTTCTAGCG+CGG - chr4_1:50483598-50483617 Msa0553350:intron 45.0%
AGACAAGCTAACCACGTTAG+AGG + chr4_1:50483657-50483676 None:intergenic 45.0%
ATAAATGCCGGTGCATTAGG+TGG + chr4_1:50483826-50483845 None:intergenic 45.0%
! CCTAATGCACCGGCATTTAT+CGG - chr4_1:50483826-50483845 Msa0553350:intron 45.0%
CTGATAAGTGGGTATGGTTC+AGG - chr4_1:50483945-50483964 Msa0553350:intron 45.0%
GATAAGTGGGTATGGTTCAG+GGG - chr4_1:50483947-50483966 Msa0553350:intron 45.0%
ATAAGTGGGTATGGTTCAGG+GGG - chr4_1:50483948-50483967 Msa0553350:intron 45.0%
TACTGCAACCATTCTGCAGT+TGG - chr4_1:50484045-50484064 Msa0553350:intron 45.0%
! ATCACTAGTGAAGCTTTGGC+CGG - chr4_1:50484483-50484502 Msa0553350:intron 45.0%
CCTAAGCAACAAGGTAAACC+TGG + chr4_1:50484568-50484587 None:intergenic 45.0%
! CCAGGTTTACCTTGTTGCTT+AGG - chr4_1:50484565-50484584 Msa0553350:CDS 45.0%
TCGATGATGTGACACTGTCT+AGG - chr4_1:50485101-50485120 Msa0553350:intron 45.0%
GTCTAGGCAGATTCTCACTT+AGG - chr4_1:50485117-50485136 Msa0553350:intron 45.0%
CTAGGCAGATTCTCACTTAG+GGG - chr4_1:50485119-50485138 Msa0553350:intron 45.0%
! CCAAAGTTCCAATCTAGGGT+TGG + chr4_1:50485254-50485273 None:intergenic 45.0%
CCAACCCTAGATTGGAACTT+TGG - chr4_1:50485251-50485270 Msa0553350:CDS 45.0%
TTGTGGCTTTCCAACAGAAG+AGG - chr4_1:50485650-50485669 Msa0553350:intron 45.0%
TTTGATCGAGGGATGTATGC+TGG - chr4_1:50485951-50485970 Msa0553350:intron 45.0%
AAGCAACCCATACTTGGAGT+GGG - chr4_1:50486474-50486493 Msa0553350:intron 45.0%
GAATTTCGCATTCTGGTGCA+TGG + chr4_1:50487237-50487256 None:intergenic 45.0%
ATGCCATGCTCCGTATCAAT+TGG + chr4_1:50487370-50487389 None:intergenic 45.0%
TTATGGAGAGGGAGGAGATT+TGG - chr4_1:50487411-50487430 Msa0553350:exon 45.0%
GGAGGAGATTTGGACCAAAT+TGG - chr4_1:50487421-50487440 Msa0553350:five_prime_UTR 45.0%
!!! TATTTTATTTTTTTTCATTT+TGG - chr4_1:50481086-50481105 Msa0553350:intron 5.0%
TGTGAGCCACTTGTGTGTAG+TGG + chr4_1:50480843-50480862 None:intergenic 50.0%
! TGTGTTCAGTGCATTGGTGG+TGG + chr4_1:50481055-50481074 None:intergenic 50.0%
CAAAAGCTTGAGTCGGTCGT+TGG - chr4_1:50481642-50481661 Msa0553350:intron 50.0%
CGCGTTTCTATCGTCCTAAC+TGG + chr4_1:50481831-50481850 None:intergenic 50.0%
ATTGCAGCTGATGCTACTGG+TGG + chr4_1:50481861-50481880 None:intergenic 50.0%
ACCAGTAGCATCAGCTGCAA+TGG - chr4_1:50481860-50481879 Msa0553350:intron 50.0%
AGCATCTAGGAAGCAGAAGG+TGG + chr4_1:50482019-50482038 None:intergenic 50.0%
! GAAGGCATATGGTGCAGAAG+AGG + chr4_1:50482362-50482381 None:intergenic 50.0%
! GCTGTGGCATAGAAGGCATA+TGG + chr4_1:50482373-50482392 None:intergenic 50.0%
! TGCCCTTTGATTCGCGCATA+TGG - chr4_1:50482452-50482471 Msa0553350:intron 50.0%
CCTCCATATGCGCGAATCAA+AGG + chr4_1:50482458-50482477 None:intergenic 50.0%
! CCTTTGATTCGCGCATATGG+AGG - chr4_1:50482455-50482474 Msa0553350:intron 50.0%
!! TGTTTCTTGAAGTGCCGCGA+TGG + chr4_1:50482996-50483015 None:intergenic 50.0%
ACGCTATCCTTCAGAGCTTG+TGG + chr4_1:50483157-50483176 None:intergenic 50.0%
CCGATAAATGCCGGTGCATT+AGG + chr4_1:50483829-50483848 None:intergenic 50.0%
TTATGTCGGGTATGGGCGTA+TGG - chr4_1:50483911-50483930 Msa0553350:intron 50.0%
TAGTGATGGTCCTCTAGCAC+GGG + chr4_1:50484511-50484530 None:intergenic 50.0%
CTAGTGATGGTCCTCTAGCA+CGG + chr4_1:50484512-50484531 None:intergenic 50.0%
TGACGGTCTAGTGCTAGTGA+TGG + chr4_1:50484525-50484544 None:intergenic 50.0%
!! AACTACGCGCTTGTTTTCGC+AGG - chr4_1:50485388-50485407 Msa0553350:intron 50.0%
AGCCACAAACTGCAGGACTT+GGG + chr4_1:50485638-50485657 None:intergenic 50.0%
AAGCCACAAACTGCAGGACT+TGG + chr4_1:50485639-50485658 None:intergenic 50.0%
GTTGGAAAGCCACAAACTGC+AGG + chr4_1:50485645-50485664 None:intergenic 50.0%
TGTATGCTGGACCTGTTGGT+TGG - chr4_1:50485964-50485983 Msa0553350:intron 50.0%
CAATGCTGACCTGATGCCAA+CGG + chr4_1:50486015-50486034 None:intergenic 50.0%
! GCTGGAACTGGAATAGTGGA+AGG - chr4_1:50486451-50486470 Msa0553350:CDS 50.0%
GGAAGGAAGCAACCCATACT+TGG - chr4_1:50486468-50486487 Msa0553350:intron 50.0%
GAAGCAACCCATACTTGGAG+TGG - chr4_1:50486473-50486492 Msa0553350:intron 50.0%
GCTCATCCCACTCCAAGTAT+GGG + chr4_1:50486483-50486502 None:intergenic 50.0%
AGCTCATCCCACTCCAAGTA+TGG + chr4_1:50486484-50486503 None:intergenic 50.0%
CAACCGCCACTACACACAAG+TGG - chr4_1:50480834-50480853 Msa0553350:three_prime_UTR 55.0%
GAGCCACTTGTGTGTAGTGG+CGG + chr4_1:50480840-50480859 None:intergenic 55.0%
GCCATTGCAGCTGATGCTAC+TGG + chr4_1:50481864-50481883 None:intergenic 55.0%
GAACACAGGGTATGCACCTG+AGG + chr4_1:50482551-50482570 None:intergenic 55.0%
CCTTCAGCCACCTAATGCAC+CGG - chr4_1:50483816-50483835 Msa0553350:intron 55.0%
TTCGCAGGCAGTCTGCGAAA+AGG - chr4_1:50485403-50485422 Msa0553350:intron 55.0%
CACCCAAGTCCTGCAGTTTG+TGG - chr4_1:50485633-50485652 Msa0553350:intron 55.0%
GGGATGTATGCTGGACCTGT+TGG - chr4_1:50485960-50485979 Msa0553350:intron 55.0%
! GCTGGACCTGTTGGTTGGTT+TGG - chr4_1:50485969-50485988 Msa0553350:intron 55.0%
!! GGACCTGTTGGTTGGTTTGG+AGG - chr4_1:50485972-50485991 Msa0553350:intron 55.0%
CCTCCTCCAAACCAACCAAC+AGG + chr4_1:50485978-50485997 None:intergenic 55.0%
!! CCTGTTGGTTGGTTTGGAGG+AGG - chr4_1:50485975-50485994 Msa0553350:intron 55.0%
GTGAGTTTGCCGTTGGCATC+AGG - chr4_1:50486003-50486022 Msa0553350:intron 55.0%
CGTTGGCATCAGGTCAGCAT+TGG - chr4_1:50486013-50486032 Msa0553350:intron 55.0%
! TGGCATCAGGTCAGCATTGG+TGG - chr4_1:50486016-50486035 Msa0553350:intron 55.0%
!! CAGGTCAGCATTGGTGGAAC+AGG - chr4_1:50486022-50486041 Msa0553350:intron 55.0%
GTCGTGGGAAAAGGCCATCG+CGG - chr4_1:50482979-50482998 Msa0553350:intron 60.0%
CCGGTGCATTAGGTGGCTGA+AGG + chr4_1:50483819-50483838 None:intergenic 60.0%
TGGTCCTCTAGCACGGGTTC+CGG + chr4_1:50484505-50484524 None:intergenic 60.0%
GGCGAGAGTGAGTTTGCCGT+TGG - chr4_1:50485996-50486015 Msa0553350:intron 60.0%
GCTTGAGTCGGTCGTTGGGC+CGG - chr4_1:50481647-50481666 Msa0553350:intron 65.0%
TTGGCCGGAACCCGTGCTAG+AGG - chr4_1:50484498-50484517 Msa0553350:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 50480610 50487628 50480610 ID=Msa0553350;Name=Msa0553350
chr4_1 mRNA 50480610 50487628 50480610 ID=Msa0553350-mRNA-1;Parent=Msa0553350;Name=Msa0553350-mRNA-1;_AED=0.13;_eAED=0.13;_QI=217|1|1|1|0.92|0.86|15|344|566
chr4_1 exon 50480610 50480935 50480610 ID=Msa0553350-mRNA-1:exon:14270;Parent=Msa0553350-mRNA-1
chr4_1 exon 50481391 50481465 50481391 ID=Msa0553350-mRNA-1:exon:14269;Parent=Msa0553350-mRNA-1
chr4_1 exon 50481716 50481808 50481716 ID=Msa0553350-mRNA-1:exon:14268;Parent=Msa0553350-mRNA-1
chr4_1 exon 50482195 50482292 50482195 ID=Msa0553350-mRNA-1:exon:14267;Parent=Msa0553350-mRNA-1
chr4_1 exon 50482542 50482626 50482542 ID=Msa0553350-mRNA-1:exon:14266;Parent=Msa0553350-mRNA-1
chr4_1 exon 50482718 50482828 50482718 ID=Msa0553350-mRNA-1:exon:14265;Parent=Msa0553350-mRNA-1
chr4_1 exon 50483508 50483565 50483508 ID=Msa0553350-mRNA-1:exon:14264;Parent=Msa0553350-mRNA-1
chr4_1 exon 50483670 50483788 50483670 ID=Msa0553350-mRNA-1:exon:14263;Parent=Msa0553350-mRNA-1
chr4_1 exon 50484383 50484451 50484383 ID=Msa0553350-mRNA-1:exon:14262;Parent=Msa0553350-mRNA-1
chr4_1 exon 50484558 50484632 50484558 ID=Msa0553350-mRNA-1:exon:14261;Parent=Msa0553350-mRNA-1
chr4_1 exon 50484736 50484882 50484736 ID=Msa0553350-mRNA-1:exon:14260;Parent=Msa0553350-mRNA-1
chr4_1 exon 50485214 50485330 50485214 ID=Msa0553350-mRNA-1:exon:14259;Parent=Msa0553350-mRNA-1
chr4_1 exon 50485685 50485802 50485685 ID=Msa0553350-mRNA-1:exon:14258;Parent=Msa0553350-mRNA-1
chr4_1 exon 50486076 50486485 50486076 ID=Msa0553350-mRNA-1:exon:14257;Parent=Msa0553350-mRNA-1
chr4_1 exon 50487268 50487628 50487268 ID=Msa0553350-mRNA-1:exon:14256;Parent=Msa0553350-mRNA-1
chr4_1 five_prime_UTR 50487412 50487628 50487412 ID=Msa0553350-mRNA-1:five_prime_utr;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50487268 50487411 50487268 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50486076 50486485 50486076 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50485685 50485802 50485685 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50485214 50485330 50485214 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50484736 50484882 50484736 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50484558 50484632 50484558 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50484383 50484451 50484383 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50483670 50483788 50483670 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50483508 50483565 50483508 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50482718 50482828 50482718 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50482542 50482626 50482542 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50482195 50482292 50482195 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50481716 50481808 50481716 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 CDS 50481409 50481465 50481409 ID=Msa0553350-mRNA-1:cds;Parent=Msa0553350-mRNA-1
chr4_1 three_prime_UTR 50481391 50481408 50481391 ID=Msa0553350-mRNA-1:three_prime_utr;Parent=Msa0553350-mRNA-1
chr4_1 three_prime_UTR 50480610 50480935 50480610 ID=Msa0553350-mRNA-1:three_prime_utr;Parent=Msa0553350-mRNA-1
Gene Sequence

>Msa0553350

ATGGCAACAACCGCCACTACACACAAGTGGCTCACAAACTTTATCAACACAAATGGCTGCAATATCCTTGTACCTCATGTTTCCAAGAGACAACGACAACAACATTATCATCAACAATCTATGTATCTTATCCACCGCCAACATAGACCTATTTGTAAGGGATGCTACCTTTCAATGAATGGTTGTAAAGAAGGAGAAATAAATAAAAGTTCAAGAGAACCAGTTAGGACGATAGAAACGCGAACATTGCCACCAGTAGCATCAGCTGCAATGGCTATGTACAGTCTCAAAATGGCTATTTCAGAGCTAAAAGAAATCTCTCCATTTTGTACCTCATCTGGCATAGTGAGAGTTGAGGTTCCTATTGAGGAGCAAGTTGAAGCAATTGATTGGCTTCATTCACAAAACCACCTTCTGCTTCCTAGATGCTACTTCTCTGGCAAGGAACAGAAATCTTGCCCTGGAAACTTGGTTAGCATTGCTGGTGTTGGTTCCGCTGTTTCCTTTTCGCAGTCACAGCCATTTTCCTATTGGGATTGGATATCTATAAGGAGGTTTCTTTCTGAGAGCTGCCCTTTGATTCGCGCATATGGAGGTATCCGTTTCAATGCAAAAGCTAATGTTTCATCAGAGTGGATGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAGTTTAATGAGCTTGAAGGAGGATCAATGCTTACCACTACTATTGCTTGGGATAATGATCTTTGTTGGTCGTGGGAAAAGGCCATCGCGGCACTTCAAGAAACACTTTGCAAAGTTTCTACTTCCATTGTAAAGTTTCCTAAGCAAGCTCCTCCAACATTGATATTAAGCAGCCATAACATTCCTAGTAAAGAAGATTGGAATCTTGCTGTTAATAGAGCTTTGCAGATGATAGAGCAAAATGATTCCTCACTTACCAAGGTTGTTCTAGCGCGGAGCACTAGAGTAGTGCCTACTGTAAATATCAATCCTCTAACGTGGTTAGCTTGTCTAAAGGTTGAAGGTGGAAATGCTTACCAATTTTTCCTTCAGCCACCTAATGCACCGGCATTTATCGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTCCATATCACTAGTGAAGCTTTGGCCGGAACCCGTGCTAGAGGACCATCACTAGCACTAGACCGTCAAATTGAACTTGACTTACTTACCAGTCCGAAGGACGACATTGAGTTTACTATAGTAAGAGAAAGCATACGAAGAAAATTGGAGGCAGTCTGCGAAAAGGTTATAATCGAGCCAAAGAAAATGATTAGAAAACTGCCAAGGATCCAACATTTATTTGCTCAATTAACTGGAAGGTTAAGAAACGAAGAGGATGAGTTTGAAATTTTGTCATCACTTCACCCAAGTCCTGCAGTTTGTGGCTTTCCAACAGAAGAGGCACAAGTTTTAATTGCGGAAACAGAAGTGTTTGATCGAGGGATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGGCGAGAGTGAGTTTGCCGTTGGCATCAGGTCAGCATTGGTGGAACAGGAACTAGGTGCTTTGATATATGCTGGAACTGGAATAGTGGAAGGAAGCAACCCATACTTGGAGTGGGATGAGCTAGAACTCAAAACATCTCAGTTCACTAAGTTACTTAAACTGGACTTGCCTCTGAGACAAAAAGTAGATTGTAAATGA

Protein sequence

>Msa0553350

MATTATTHKWLTNFINTNGCNILVPHVSKRQRQQHYHQQSMYLIHRQHRPICKGCYLSMNGCKEGEINKSSREPVRTIETRTLPPVASAAMAMYSLKMAISELKEISPFCTSSGIVRVEVPIEEQVEAIDWLHSQNHLLLPRCYFSGKEQKSCPGNLVSIAGVGSAVSFSQSQPFSYWDWISIRRFLSESCPLIRAYGGIRFNAKANVSSEWMAFGSFYFMIPQVEFNELEGGSMLTTTIAWDNDLCWSWEKAIAALQETLCKVSTSIVKFPKQAPPTLILSSHNIPSKEDWNLAVNRALQMIEQNDSSLTKVVLARSTRVVPTVNINPLTWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGPSLALDRQIELDLLTSPKDDIEFTIVRESIRRKLEAVCEKVIIEPKKMIRKLPRIQHLFAQLTGRLRNEEDEFEILSSLHPSPAVCGFPTEEAQVLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEQELGALIYAGTGIVEGSNPYLEWDELELKTSQFTKLLKLDLPLRQKVDCK*