AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0647710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647710 MtrunA17_Chr4g0039031 96.120 567 21 1 1 566 1 567 0.0 1124
Msa0647710 MtrunA17_Chr7g0217861 94.017 117 7 0 432 548 1 117 1.08e-73 231
Msa0647710 MtrunA17_Chr8g0368521 32.812 192 118 5 80 264 79 266 5.99e-18 88.2
Msa0647710 MtrunA17_Chr3g0116881 24.925 333 208 9 251 555 252 570 1.38e-14 76.6
Msa0647710 MtrunA17_Chr1g0199851 25.000 300 210 10 258 546 371 666 1.37e-13 73.9
Msa0647710 MtrunA17_Chr3g0107391 24.625 333 209 9 251 555 275 593 2.47e-13 72.8
Msa0647710 MtrunA17_Chr3g0113261 24.925 333 208 9 251 555 276 594 6.24e-13 71.6
Msa0647710 MtrunA17_Chr1g0211991 26.421 299 192 7 277 555 270 560 9.98e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647710 AT1G18870.1 56.505 515 201 5 55 554 47 553 0.0 589
Msa0647710 AT1G18870.2 56.360 511 200 5 59 554 1 503 0.0 583
Msa0647710 AT1G74710.1 54.221 533 215 5 46 556 35 560 0.0 583
Msa0647710 AT1G74710.2 53.861 531 216 5 46 554 35 558 0.0 573
Msa0647710 AT1G18870.3 53.398 515 193 6 55 554 47 529 0.0 538
Msa0647710 AT1G68890.1 29.915 234 150 6 43 266 43 272 1.31e-20 97.1
Msa0647710 AT2G29690.1 27.309 249 148 4 327 555 365 600 7.50e-14 75.1

Find 172 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATAAAATTGCAATTA+TGG 0.163087 4_3:-53784260 Msa0647710:three_prime_UTR
AAGAATACAAACTAATTAAA+TGG 0.188329 4_3:-53791093 Msa0647710:five_prime_UTR
TTTCTTTGCTTTAGATATTA+TGG 0.207430 4_3:-53784365 Msa0647710:intron
AGCTCATCCCACTCCAAGTA+TGG 0.248367 4_3:+53785173 None:intergenic
CATTTATTTGCTCAATTAAC+TGG 0.264103 4_3:-53786182 Msa0647710:CDS
GGAGGAGATTTGGACCAAAT+TGG 0.264110 4_3:-53784233 Msa0647710:three_prime_UTR
AGCAACTATTTCACAGAAAA+TGG 0.276767 4_3:-53787202 Msa0647710:CDS
AGAAAGCATACGAAGAAAAT+TGG 0.278150 4_3:-53786950 Msa0647710:CDS
GGAAACTTGGTTAGCATTGC+TGG 0.279230 4_3:-53789664 Msa0647710:CDS
TCATCAGAGTGGATGGCTTT+TGG 0.282890 4_3:-53789231 Msa0647710:CDS
CGCGTTTCTATCGTCCTAAC+TGG 0.284030 4_3:+53789907 None:intergenic
CTACAAACCTTATTTGTTGA+TGG 0.300442 4_3:+53784821 None:intergenic
CCGATAAATGCCGGTGCATT+AGG 0.301055 4_3:+53787912 None:intergenic
CACCCAAGTCCTGCAGTTTG+TGG 0.304536 4_3:-53786022 Msa0647710:CDS
GCTGGACCTGTTGGTTGGTT+TGG 0.311172 4_3:-53785686 Msa0647710:CDS
TTATGGAGAGGGAGGAGATT+TGG 0.314731 4_3:-53784243 Msa0647710:three_prime_UTR
GTTCACTAAGTTACTTAAAC+TGG 0.317030 4_3:-53784882 Msa0647710:CDS
AGACAAGCTAACCACGTTAG+AGG 0.324370 4_3:+53788085 None:intergenic
CTTCTTTACTAGGAATGTTA+TGG 0.328879 4_3:+53788324 None:intergenic
ATCCAATCCCAATAGGAAAA+TGG 0.334738 4_3:+53789607 None:intergenic
GCTTCAACTTGCTCCTCAAT+AGG 0.339305 4_3:+53789766 None:intergenic
TTTGTATTCTTGCTTTCATT+AGG 0.350095 4_3:+53791105 None:intergenic
AACATGAGGGAGATGGAAAA+TGG 0.350219 4_3:+53790956 None:intergenic
CCAAAGCTTCACTAGTGATA+TGG 0.351321 4_3:+53787177 None:intergenic
GGCTATGTACAGTCTCAAAA+TGG 0.363690 4_3:-53789854 Msa0647710:CDS
CATTACTTTAAGAACAACTT+TGG 0.366850 4_3:+53784070 None:intergenic
ATATAATACAACATGTACTA+TGG 0.367333 4_3:+53784184 None:intergenic
AGTCAAATGAACACCCAATT+TGG 0.368161 4_3:+53784219 None:intergenic
CCTAATGCACCGGCATTTAT+CGG 0.372337 4_3:-53787912 Msa0647710:CDS
AGGTAGCATCCCTTACAAAT+AGG 0.375008 4_3:+53789979 None:intergenic
CTGTTGTTGTCGTTGTCTCT+TGG 0.375042 4_3:+53790831 None:intergenic
AGATTCCAATCTTCTTTACT+AGG 0.376208 4_3:+53788314 None:intergenic
ATGAGCTCCATCAACAAATA+AGG 0.381553 4_3:-53784828 Msa0647710:intron
GCAAATAAATGTTGGATCCT+TGG 0.384897 4_3:+53786194 None:intergenic
GCAATGCTAACCAAGTTTCC+AGG 0.385429 4_3:+53789667 None:intergenic
TGCTTACCACTACTATTGCT+TGG 0.388809 4_3:-53788800 Msa0647710:CDS
GGACCTGTTGGTTGGTTTGG+AGG 0.393014 4_3:-53785683 Msa0647710:CDS
ATTGGGATTGGATATCTATA+AGG 0.399903 4_3:-53789597 Msa0647710:CDS
GAGGAGATTTGGACCAAATT+GGG 0.401584 4_3:-53784232 Msa0647710:three_prime_UTR
GTTGTTGTTTCAAAGTGATA+TGG 0.401605 4_3:+53791060 None:intergenic
ATGCCAGATGAGGTACAAAA+TGG 0.404784 4_3:+53789805 None:intergenic
TGGTCCTCTAGCACGGGTTC+CGG 0.410896 4_3:+53787154 None:intergenic
GTGAGTTTGCCGTTGGCATC+AGG 0.415994 4_3:-53785652 Msa0647710:CDS
GAAATCTTGCCCTGGAAACT+TGG 0.418146 4_3:-53789677 Msa0647710:CDS
CAGGTCAGCATTGGTGGAAC+AGG 0.418978 4_3:-53785633 Msa0647710:intron
TGCCCTTTGATTCGCGCATA+TGG 0.422545 4_3:-53789285 Msa0647710:CDS
AGCAAGTTGAAGCAATTGAT+TGG 0.422787 4_3:-53789756 Msa0647710:CDS
CTTCCTAGATGCTACTTCTC+TGG 0.424133 4_3:-53789709 Msa0647710:CDS
TTTCTGTGAAATAGTTGCTC+TGG 0.426610 4_3:+53787206 None:intergenic
TCAATGAATGGTTGTAAAGA+AGG 0.426979 4_3:-53789955 Msa0647710:CDS
TTTCTACTTCATGATTCCTC+AGG 0.428813 4_3:-53789205 Msa0647710:intron
GCTTACCACTACTATTGCTT+GGG 0.431278 4_3:-53788799 Msa0647710:CDS
ATGCCATGCTCCGTATCAAT+TGG 0.432507 4_3:+53784287 None:intergenic
TGTTCAGAGACCTATTTGTA+AGG 0.433073 4_3:-53789989 Msa0647710:intron
GGAAGGAAGCAACCCATACT+TGG 0.437293 4_3:-53785186 Msa0647710:CDS
TATAGATATCCAATCCCAAT+AGG 0.437928 4_3:+53789600 None:intergenic
GTAAGTCAAGTTCAATTTGA+CGG 0.442874 4_3:+53787117 None:intergenic
CCATATCACTAGTGAAGCTT+TGG 0.446524 4_3:-53787177 Msa0647710:CDS
GTTGAGTTTAATGAGCTTGA+AGG 0.447276 4_3:-53788831 Msa0647710:CDS
GGATGCTACCTTTCAATGAA+TGG 0.448779 4_3:-53789967 Msa0647710:CDS
AAAACTTGTGCCTCTTCTGT+TGG 0.455039 4_3:+53785995 None:intergenic
CTTGGGATAATGATCTTTGT+TGG 0.458807 4_3:-53788782 Msa0647710:CDS
GCTTTGATATATGCTGGAAC+TGG 0.459668 4_3:-53785215 Msa0647710:CDS
AAGCCACAAACTGCAGGACT+TGG 0.460419 4_3:+53786019 None:intergenic
TGTTTCAAAGTGATATGGTT+TGG 0.460796 4_3:+53791065 None:intergenic
TCTTTGTTGGTCGTGGGAAA+AGG 0.461435 4_3:-53788769 Msa0647710:CDS
GAGAGTTGAGGTTCCTATTG+AGG 0.466956 4_3:-53789779 Msa0647710:CDS
AGAATACAAACTAATTAAAT+GGG 0.468152 4_3:-53791092 Msa0647710:five_prime_UTR
AAAGTTCAAGAGAACCAGTT+AGG 0.471129 4_3:-53789921 Msa0647710:CDS
AATGTTGGAGGAGCTTGCTT+AGG 0.475322 4_3:+53788359 None:intergenic
GCCATTGCAGCTGATGCTAC+TGG 0.478778 4_3:+53789874 None:intergenic
TGGCATCAGGTCAGCATTGG+TGG 0.478970 4_3:-53785639 Msa0647710:CDS
CCTCCTCCAAACCAACCAAC+AGG 0.481639 4_3:+53785680 None:intergenic
CCTCCATATGCGCGAATCAA+AGG 0.481748 4_3:+53789282 None:intergenic
CCTGTTGGTTGGTTTGGAGG+AGG 0.487475 4_3:-53785680 Msa0647710:CDS
ACATTCCTAGTAAAGAAGAT+TGG 0.489547 4_3:-53788319 Msa0647710:CDS
CTAGGTGCTTTGATATATGC+TGG 0.491160 4_3:-53785221 Msa0647710:CDS
CGTTGGCATCAGGTCAGCAT+TGG 0.491560 4_3:-53785642 Msa0647710:CDS
GTAAACTCAATGTCGTCCTT+CGG 0.493229 4_3:+53786982 None:intergenic
ACAAACTTTATCAACACAAA+TGG 0.495884 4_3:-53790880 Msa0647710:CDS
TGGCTGCTTAATATCAATGT+TGG 0.498602 4_3:+53788344 None:intergenic
TTAATTGAGCAAATAAATGT+TGG 0.499910 4_3:+53786186 None:intergenic
GTTAAGAAACGAAGAGGATG+AGG 0.505866 4_3:-53786156 Msa0647710:intron
TTGGTTAGCATTGCTGGTGT+TGG 0.507263 4_3:-53789658 Msa0647710:CDS
TCAAAACGATTGTAGGTTGA+AGG 0.507970 4_3:-53787966 Msa0647710:intron
CTCCATATGCGCGAATCAAA+GGG 0.510017 4_3:+53789283 None:intergenic
ATAAAATTGCAATTATGGAG+AGG 0.516343 4_3:-53784255 Msa0647710:three_prime_UTR
GCTAGAACTCAAAACATCTC+AGG 0.519609 4_3:-53785153 Msa0647710:intron
TTGCCAGAGAAGTAGCATCT+AGG 0.520561 4_3:+53789706 None:intergenic
CTGCTTAATATCAATGTTGG+AGG 0.521541 4_3:+53788347 None:intergenic
ATATGCTGGAACTGGAATAG+TGG 0.522449 4_3:-53785207 Msa0647710:CDS
ACCAGTAGCATCAGCTGCAA+TGG 0.522993 4_3:-53789875 Msa0647710:CDS
CTAGTGATGGTCCTCTAGCA+CGG 0.525024 4_3:+53787147 None:intergenic
TTCAAAGTGATATGGTTTGG+TGG 0.528437 4_3:+53791068 None:intergenic
TCAAAGTGATATGGTTTGGT+GGG 0.529430 4_3:+53791069 None:intergenic
TTCGCAGGCAGTCTGCGAAA+AGG 0.530662 4_3:-53786252 Msa0647710:intron
TGTATGCTGGACCTGTTGGT+TGG 0.531912 4_3:-53785691 Msa0647710:CDS
TTCCTTCACACATAAACTCA+TGG 0.533478 4_3:-53790932 Msa0647710:exon
AAGGAAGAACATGAGGGAGA+TGG 0.535903 4_3:+53790949 None:intergenic
ATAATGATCTTTGTTGGTCG+TGG 0.536372 4_3:-53788776 Msa0647710:CDS
ATTCCAATTGATACGGAGCA+TGG 0.537685 4_3:-53784290 Msa0647710:three_prime_UTR
TAATGATCTTTGTTGGTCGT+GGG 0.538149 4_3:-53788775 Msa0647710:CDS
GTTGGAAAGCCACAAACTGC+AGG 0.539573 4_3:+53786013 None:intergenic
CTTTACAACCATTCATTGAA+AGG 0.540015 4_3:+53789959 None:intergenic
TATTTGCTCAATTAACTGGA+AGG 0.540497 4_3:-53786178 Msa0647710:CDS
AAATGGCTGTGACTGCGAAA+AGG 0.540950 4_3:+53789624 None:intergenic
GAGTGTTATTCCAATTGATA+CGG 0.541124 4_3:-53784297 Msa0647710:three_prime_UTR
GTTCAGAGACCTATTTGTAA+GGG 0.543319 4_3:-53789988 Msa0647710:intron
CCTTCAGCCACCTAATGCAC+CGG 0.546354 4_3:-53787922 Msa0647710:CDS
TAATGTTTCATCAGAGTGGA+TGG 0.547863 4_3:-53789238 Msa0647710:CDS
ATGTGTGAAGGAAGAACATG+AGG 0.555738 4_3:+53790942 None:intergenic
TTGGCCGGAACCCGTGCTAG+AGG 0.556180 4_3:-53787158 Msa0647710:CDS
TAAAATTGCAATTATGGAGA+GGG 0.557454 4_3:-53784254 Msa0647710:three_prime_UTR
CATAACATACATGTTGGCGG+TGG 0.557889 4_3:+53790782 None:intergenic
GCTCATCCCACTCCAAGTAT+GGG 0.558587 4_3:+53785174 None:intergenic
TTGAACTTGACTTACTTACC+AGG 0.562261 4_3:-53787109 Msa0647710:intron
GGCGAGAGTGAGTTTGCCGT+TGG 0.562594 4_3:-53785659 Msa0647710:CDS
AATTGCAATTATGGAGAGGG+AGG 0.563266 4_3:-53784251 Msa0647710:three_prime_UTR
ATCACTAGTGAAGCTTTGGC+CGG 0.564206 4_3:-53787173 Msa0647710:CDS
TTTGATCGAGGGATGTATGC+TGG 0.570243 4_3:-53785704 Msa0647710:CDS
AGAGGATTGATATTTACAGT+AGG 0.570825 4_3:+53788103 None:intergenic
TTGCATAACATACATGTTGG+CGG 0.573535 4_3:+53790779 None:intergenic
GTTCAGAAGTGTTTGATCGA+GGG 0.574223 4_3:-53785715 Msa0647710:intron
TAGTGATGGTCCTCTAGCAC+GGG 0.574761 4_3:+53787148 None:intergenic
TGCCATGAGTTTATGTGTGA+AGG 0.579788 4_3:+53790930 None:intergenic
TTGTGGCTTTCCAACAGAAG+AGG 0.579808 4_3:-53786005 Msa0647710:CDS
TGTTTCTTGAAGTGCCGCGA+TGG 0.581100 4_3:+53788746 None:intergenic
AGCCACAAACTGCAGGACTT+GGG 0.581443 4_3:+53786020 None:intergenic
ACTGTGTTTCCGATAAATGC+CGG 0.585235 4_3:+53787903 None:intergenic
AAGCATACGAAGAAAATTGG+AGG 0.588895 4_3:-53786947 Msa0647710:intron
TCTTGGAAACATGAGGTACA+AGG 0.589561 4_3:+53790848 None:intergenic
GCTGGAACTGGAATAGTGGA+AGG 0.595266 4_3:-53785203 Msa0647710:CDS
AACGTGGTTAGCTTGTCTAA+AGG 0.599085 4_3:-53788080 Msa0647710:intron
GGGATGTATGCTGGACCTGT+TGG 0.600180 4_3:-53785695 Msa0647710:CDS
CAATGCTAACCAAGTTTCCA+GGG 0.601314 4_3:+53789668 None:intergenic
CCTTTGATTCGCGCATATGG+AGG 0.602449 4_3:-53789282 Msa0647710:CDS
AAACGATTGTAGGTTGAAGG+TGG 0.602926 4_3:-53787963 Msa0647710:intron
GAAGCAACCCATACTTGGAG+TGG 0.603898 4_3:-53785181 Msa0647710:CDS
TGTTCAGAAGTGTTTGATCG+AGG 0.604089 4_3:-53785716 Msa0647710:intron
ATAAATGCCGGTGCATTAGG+TGG 0.604297 4_3:+53787915 None:intergenic
AGTAGCATCTAGGAAGCAGA+AGG 0.604523 4_3:+53789716 None:intergenic
GAGTTTAATGAGCTTGAAGG+AGG 0.605355 4_3:-53788828 Msa0647710:CDS
TGTAGTTACCTTGGTAAGTG+AGG 0.606511 4_3:+53788250 None:intergenic
TGTGAGCCACTTGTGTGTAG+TGG 0.608516 4_3:+53790900 None:intergenic
CGTTGTCTCTTGGAAACATG+AGG 0.612604 4_3:+53790841 None:intergenic
AAGGAACAGAAATCTTGCCC+TGG 0.617216 4_3:-53789685 Msa0647710:CDS
GGGATTGGATATCTATAAGG+AGG 0.620357 4_3:-53789594 Msa0647710:intron
AGCATCTAGGAAGCAGAAGG+TGG 0.620967 4_3:+53789719 None:intergenic
AAGCAACCCATACTTGGAGT+GGG 0.621209 4_3:-53785180 Msa0647710:CDS
CCGGTGCATTAGGTGGCTGA+AGG 0.623228 4_3:+53787922 None:intergenic
AAGCTAATGTTTCATCAGAG+TGG 0.624786 4_3:-53789242 Msa0647710:CDS
CAATGCTGACCTGATGCCAA+CGG 0.626025 4_3:+53785643 None:intergenic
GTTGAAGTGTTGAACTTGAG+AGG 0.626175 4_3:+53791005 None:intergenic
AACTCTCACTATGCCAGATG+AGG 0.629562 4_3:+53789795 None:intergenic
CAACCGCCACTACACACAAG+TGG 0.631900 4_3:-53790906 Msa0647710:CDS
AAATGATTCCTCACTTACCA+AGG 0.633006 4_3:-53788258 Msa0647710:intron
AAACTCAGGTTGTTCTAGCG+CGG 0.633096 4_3:-53788141 Msa0647710:intron
TTGCTTAGGAAACTTTACAA+TGG 0.633615 4_3:+53788373 None:intergenic
TGACGGTCTAGTGCTAGTGA+TGG 0.637405 4_3:+53787134 None:intergenic
TGTGTGAAGGAAGAACATGA+GGG 0.641198 4_3:+53790943 None:intergenic
ATAGAAGTTGTGTAAGCACA+AGG 0.643176 4_3:+53784339 None:intergenic
TGGAAGGTTAAGAAACGAAG+AGG 0.647415 4_3:-53786162 Msa0647710:CDS
ATCTGGCATAGTGAGAGTTG+AGG 0.648266 4_3:-53789791 Msa0647710:CDS
TAGATGCTACTTCTCTGGCA+AGG 0.649242 4_3:-53789704 Msa0647710:CDS
AAATGATTAGAAAACTGCCA+AGG 0.653684 4_3:-53786211 Msa0647710:CDS
ATTATCCCAAGCAATAGTAG+TGG 0.661694 4_3:+53788794 None:intergenic
GAGCCACTTGTGTGTAGTGG+CGG 0.661793 4_3:+53790903 None:intergenic
GTGAGAAAGAAAGACAGTGG+TGG 0.672801 4_3:+53791032 None:intergenic
GTCGTGGGAAAAGGCCATCG+CGG 0.682263 4_3:-53788760 Msa0647710:CDS
AAAGTGAGAAAGAAAGACAG+TGG 0.692941 4_3:+53791029 None:intergenic
ATTGCAGCTGATGCTACTGG+TGG 0.696479 4_3:+53789877 None:intergenic
TAAATATCAATCCTCTAACG+TGG 0.724878 4_3:-53788096 Msa0647710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTATGTTTTATAAATTT+TGG - chr4_3:53787693-53787712 Msa0647710:intron 10.0%
!!! TTATTTTTTTTCTTTCTTTT+TGG - chr4_3:53788145-53788164 Msa0647710:intron 10.0%
!! TTACATTCTAATAAATTAAA+AGG - chr4_3:53790687-53790706 Msa0647710:intron 10.0%
!! TATCAAATAAAAAACTATAA+GGG + chr4_3:53791010-53791029 None:intergenic 10.0%
!! TTATCAAATAAAAAACTATA+AGG + chr4_3:53791011-53791030 None:intergenic 10.0%
!! AAGAATACAAACTAATTAAA+TGG - chr4_3:53784066-53784085 Msa0647710:three_prime_UTR 15.0%
!! AGAATACAAACTAATTAAAT+GGG - chr4_3:53784067-53784086 Msa0647710:three_prime_UTR 15.0%
!!! TTTAATTAATTTGATACTAG+AGG - chr4_3:53784623-53784642 Msa0647710:intron 15.0%
!! TGTAATTGAAATAAGTTATT+TGG - chr4_3:53784830-53784849 Msa0647710:exon 15.0%
!!! TCAAGTTTTCAAAAAATATT+TGG - chr4_3:53785097-53785116 Msa0647710:intron 15.0%
!!! ATGAATTTGTTAACTATATT+TGG - chr4_3:53785628-53785647 Msa0647710:intron 15.0%
!!! TTGTAATTTTAATACATTCA+AGG - chr4_3:53786205-53786224 Msa0647710:CDS 15.0%
!! ACTTATATGATAAATGTTTA+TGG - chr4_3:53786675-53786694 Msa0647710:intron 15.0%
!! AAATAGTATGTAATAAGAAT+AGG + chr4_3:53787592-53787611 None:intergenic 15.0%
!! TCATAATATAGTTTCAAAAA+AGG + chr4_3:53787740-53787759 None:intergenic 15.0%
!!! CATCATAGTTTTATAAATTT+TGG - chr4_3:53787772-53787791 Msa0647710:intron 15.0%
!! TCATAATATAGTTTCAAAAA+AGG + chr4_3:53787740-53787759 None:intergenic 15.0%
!! CAAGTTCATAAAAATTAAAA+TGG + chr4_3:53787925-53787944 None:intergenic 15.0%
!!! ATTTTTATACTTTTCATTGT+TGG - chr4_3:53788242-53788261 Msa0647710:intron 15.0%
!! AATAAAAAACATATATGCAT+AGG + chr4_3:53789280-53789299 None:intergenic 15.0%
!!! TATTTTAGAAATTCAAAATG+TGG - chr4_3:53789296-53789315 Msa0647710:CDS 15.0%
!!! AATCTTCAATTTTTTTTTAC+CGG - chr4_3:53789867-53789886 Msa0647710:CDS 15.0%
!!! TTTATTTTGTTTCATTTATG+TGG - chr4_3:53790402-53790421 Msa0647710:intron 15.0%
!! AATATTTATGAATGTATCAA+TGG - chr4_3:53790499-53790518 Msa0647710:intron 15.0%
!! ATCAAATAAAAAACTATAAG+GGG + chr4_3:53791009-53791028 None:intergenic 15.0%
!! ACATATAAATTGGTTACTAA+TGG + chr4_3:53784440-53784459 None:intergenic 20.0%
!! TTTCATTGTTATGTGAATTA+AGG - chr4_3:53784559-53784578 Msa0647710:intron 20.0%
!!! AACATTTTTTTGATACCAAA+GGG + chr4_3:53784586-53784605 None:intergenic 20.0%
!!! TAACATTTTTTTGATACCAA+AGG + chr4_3:53784587-53784606 None:intergenic 20.0%
!! TAAACTACATATAGAATTTG+TGG + chr4_3:53784759-53784778 None:intergenic 20.0%
!! TATATGTGTTGAAATATCAA+TGG + chr4_3:53784964-53784983 None:intergenic 20.0%
!!! TTTTTTGAAAACTTGATATC+CGG + chr4_3:53785093-53785112 None:intergenic 20.0%
!!! CTAATAGTCTATTCAAATTT+TGG - chr4_3:53785135-53785154 Msa0647710:intron 20.0%
!! AACTAACTTCATAAATTTCA+AGG + chr4_3:53785606-53785625 None:intergenic 20.0%
!!! TTGTGAACTATCTATATTTT+GGG + chr4_3:53785695-53785714 None:intergenic 20.0%
!!! TTTGTGAACTATCTATATTT+TGG + chr4_3:53785696-53785715 None:intergenic 20.0%
!! ATTAGAAAATAAGTCATGTT+TGG - chr4_3:53785740-53785759 Msa0647710:intron 20.0%
!!! GTCTTTTGTTACTAATTTTA+TGG + chr4_3:53786169-53786188 None:intergenic 20.0%
!!! TAGATTTTCTTTAGATTATC+AGG - chr4_3:53786707-53786726 Msa0647710:intron 20.0%
!! GTGTTATCTTAAATAAAATG+CGG - chr4_3:53787148-53787167 Msa0647710:CDS 20.0%
!! ATATCTTAAAAGTCATCATA+AGG - chr4_3:53787759-53787778 Msa0647710:intron 20.0%
!! TCAGAATATAGTTTCAAAAA+AGG + chr4_3:53787871-53787890 None:intergenic 20.0%
!!! ATATAAAAACTGCTGTTTTA+TGG - chr4_3:53788097-53788116 Msa0647710:CDS 20.0%
!!! GTACAATGATATTTGTTTTT+AGG - chr4_3:53788389-53788408 Msa0647710:intron 20.0%
!! AATTGATGTCTTCAAAAAAA+GGG + chr4_3:53788434-53788453 None:intergenic 20.0%
!! TAATTGATGTCTTCAAAAAA+AGG + chr4_3:53788435-53788454 None:intergenic 20.0%
!! GAAATTGTGAATTTAGAAAT+GGG + chr4_3:53788499-53788518 None:intergenic 20.0%
!!! GTTTTCCTTATTTACTATTT+TGG + chr4_3:53788649-53788668 None:intergenic 20.0%
!!! AATTTTTAGAATTAAGCTGT+TGG - chr4_3:53788711-53788730 Msa0647710:intron 20.0%
!!! AGTTTTCTAATCATTTTCTT+TGG + chr4_3:53788944-53788963 None:intergenic 20.0%
!! TTAATTGAGCAAATAAATGT+TGG + chr4_3:53788976-53788995 None:intergenic 20.0%
!! TAAATGACAACTTAGTTATA+TGG + chr4_3:53789090-53789109 None:intergenic 20.0%
!!! TTTTGTCTATGTTCAAAAAT+GGG + chr4_3:53789373-53789392 None:intergenic 20.0%
!!! TTTTTGTCTATGTTCAAAAA+TGG + chr4_3:53789374-53789393 None:intergenic 20.0%
!! ATTGTCCTTACTATAAAATA+CGG - chr4_3:53789420-53789439 Msa0647710:intron 20.0%
!!! CGATAATATTTTATACTACT+TGG + chr4_3:53789659-53789678 None:intergenic 20.0%
!! AAAATATTATCGTATCTACT+AGG - chr4_3:53789667-53789686 Msa0647710:CDS 20.0%
!!! TTAATTGAGATCCTATTTTT+TGG - chr4_3:53789710-53789729 Msa0647710:CDS 20.0%
!!! AATTGGTTGATTTATAATAG+CGG - chr4_3:53789744-53789763 Msa0647710:CDS 20.0%
!!! TACATGTACTTTTTTTTTTG+CGG + chr4_3:53790128-53790147 None:intergenic 20.0%
!!! AGTTCAAATTTGATAATACA+TGG + chr4_3:53790713-53790732 None:intergenic 20.0%
!!! TTTCTTTGCTTTAGATATTA+TGG - chr4_3:53790794-53790813 Msa0647710:CDS 20.0%
!! ATATAATACAACATGTACTA+TGG + chr4_3:53790978-53790997 None:intergenic 20.0%
! TTTGTATTCTTGCTTTCATT+AGG + chr4_3:53784057-53784076 None:intergenic 25.0%
! ACAAACTTTATCAACACAAA+TGG - chr4_3:53784279-53784298 Msa0647710:three_prime_UTR 25.0%
!! ACTAATGGATAACAAAAAGA+TGG + chr4_3:53784425-53784444 None:intergenic 25.0%
! ATTTACGAAGAGTTTATTCA+TGG - chr4_3:53784691-53784710 Msa0647710:intron 25.0%
!!! TCCATATCGACTTATAATTT+GGG - chr4_3:53784866-53784885 Msa0647710:CDS 25.0%
!!! CATTTAACTGTCATTTTAGA+TGG - chr4_3:53784902-53784921 Msa0647710:intron 25.0%
! TAATAATCAAAAGCTTGAGT+CGG - chr4_3:53785059-53785078 Msa0647710:intron 25.0%
!! AAAGCATTAACAGTTTGATT+CGG + chr4_3:53785670-53785689 None:intergenic 25.0%
! AAAATATCAAATAGTAGCTG+TGG + chr4_3:53785811-53785830 None:intergenic 25.0%
!! GTTGAAAATTTTCACTTTGA+AGG - chr4_3:53785836-53785855 Msa0647710:intron 25.0%
! TGTTCTTTCCAAAACTAATT+TGG - chr4_3:53785988-53786007 Msa0647710:CDS 25.0%
! ACTAAGGAAAGAAACATTTA+GGG + chr4_3:53786073-53786092 None:intergenic 25.0%
! AGTAACAAAAGACATAACTA+AGG - chr4_3:53786176-53786195 Msa0647710:CDS 25.0%
! AAATGAGTAAATCATCAGTT+TGG + chr4_3:53786263-53786282 None:intergenic 25.0%
! GATTTACTCATTTATAGCAT+TGG - chr4_3:53786270-53786289 Msa0647710:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG + chr4_3:53786553-53786572 None:intergenic 25.0%
!!! ATCTCATGCTTTTTCTTTAT+TGG - chr4_3:53786931-53786950 Msa0647710:intron 25.0%
! TTTGACGGAGAAAAAAAAAA+AGG + chr4_3:53787121-53787140 None:intergenic 25.0%
!! TATATGTTTTCTTTTGAACC+AGG - chr4_3:53787553-53787572 Msa0647710:intron 25.0%
!! ATATGTTTTCTTTTGAACCA+GGG - chr4_3:53787554-53787573 Msa0647710:intron 25.0%
! ATCATGTGAAATTCATTATG+TGG + chr4_3:53787654-53787673 None:intergenic 25.0%
! AATAAAAATCACAAGCATCA+GGG + chr4_3:53788130-53788149 None:intergenic 25.0%
! AAATAAAAATCACAAGCATC+AGG + chr4_3:53788131-53788150 None:intergenic 25.0%
! AACAAAATCTAACGTACATT+AGG + chr4_3:53788291-53788310 None:intergenic 25.0%
! GGAAATTGTGAATTTAGAAA+TGG + chr4_3:53788500-53788519 None:intergenic 25.0%
! CAATATCATCGAAATGTATA+GGG + chr4_3:53788557-53788576 None:intergenic 25.0%
! TCAATATCATCGAAATGTAT+AGG + chr4_3:53788558-53788577 None:intergenic 25.0%
! TTGAAATTGAAATGCTTATG+TGG - chr4_3:53788574-53788593 Msa0647710:intron 25.0%
! TAGTAAATAAGGAAAACTAG+AGG - chr4_3:53788652-53788671 Msa0647710:intron 25.0%
! AAATTCATCACATAGAAACA+AGG + chr4_3:53788696-53788715 None:intergenic 25.0%
! CATTTATTTGCTCAATTAAC+TGG - chr4_3:53788977-53788996 Msa0647710:intron 25.0%
!! TTTTTACTTGAACTGTAACA+TGG + chr4_3:53789032-53789051 None:intergenic 25.0%
! AGAACAAGTAGGAAAATATT+TGG + chr4_3:53789242-53789261 None:intergenic 25.0%
! CTTGTAATAAAGTCAAAGTT+AGG - chr4_3:53789324-53789343 Msa0647710:intron 25.0%
! TTAGGTGATATTGATATGTT+TGG - chr4_3:53789342-53789361 Msa0647710:intron 25.0%
!! AACATCTGTTGTTTGAAATA+CGG - chr4_3:53789627-53789646 Msa0647710:CDS 25.0%
! AAATAGGATCTCAATTAACT+TGG + chr4_3:53789708-53789727 None:intergenic 25.0%
!!! GAGTATTGAGATACTAATAA+TGG + chr4_3:53789842-53789861 None:intergenic 25.0%
!! ACATTTGCAAGTTTTCATAT+AGG - chr4_3:53789913-53789932 Msa0647710:CDS 25.0%
!! ATGTGAATGCATACATATTT+TGG - chr4_3:53790034-53790053 Msa0647710:intron 25.0%
! ACATGTATCTGATTCAAATT+TGG + chr4_3:53790157-53790176 None:intergenic 25.0%
! TATGTATTAATATCTCACAG+CGG + chr4_3:53790561-53790580 None:intergenic 25.0%
!! TAATTTAGAGCTTCTCTAAA+TGG + chr4_3:53790661-53790680 None:intergenic 25.0%
!! CCATAATTGCAATTTTATTG+AGG + chr4_3:53790902-53790921 None:intergenic 25.0%
! CCTCAATAAAATTGCAATTA+TGG - chr4_3:53790899-53790918 Msa0647710:CDS 25.0%
! ATAAAATTGCAATTATGGAG+AGG - chr4_3:53790904-53790923 Msa0647710:CDS 25.0%
! TAAAATTGCAATTATGGAGA+GGG - chr4_3:53790905-53790924 Msa0647710:CDS 25.0%
!! CATTACTTTAAGAACAACTT+TGG + chr4_3:53791092-53791111 None:intergenic 25.0%
TGTTTCAAAGTGATATGGTT+TGG + chr4_3:53784097-53784116 None:intergenic 30.0%
!! GTTGTTGTTTCAAAGTGATA+TGG + chr4_3:53784102-53784121 None:intergenic 30.0%
AGTTTGCATAACATACATGT+TGG + chr4_3:53784386-53784405 None:intergenic 30.0%
GTTGCAACACACATATAAAT+TGG + chr4_3:53784450-53784469 None:intergenic 30.0%
!! CTCCATATCGACTTATAATT+TGG - chr4_3:53784865-53784884 Msa0647710:CDS 30.0%
TCCCAAATTATAAGTCGATA+TGG + chr4_3:53784870-53784889 None:intergenic 30.0%
!! TATCGACTTATAATTTGGGA+TGG - chr4_3:53784870-53784889 Msa0647710:CDS 30.0%
AGCAAATTCACTTTCAAAGT+AGG + chr4_3:53785034-53785053 None:intergenic 30.0%
CTTTACAACCATTCATTGAA+AGG + chr4_3:53785203-53785222 None:intergenic 30.0%
TCAATGAATGGTTGTAAAGA+AGG - chr4_3:53785204-53785223 Msa0647710:CDS 30.0%
TATAGATATCCAATCCCAAT+AGG + chr4_3:53785562-53785581 None:intergenic 30.0%
ATTGGGATTGGATATCTATA+AGG - chr4_3:53785562-53785581 Msa0647710:intron 30.0%
TCATAAATTTCAAGGAACCA+AGG + chr4_3:53785598-53785617 None:intergenic 30.0%
AAGCATTAACAGTTTGATTC+GGG + chr4_3:53785669-53785688 None:intergenic 30.0%
GAAAATAAGTCATGTTTGGT+TGG - chr4_3:53785744-53785763 Msa0647710:intron 30.0%
!!! CATTAGCTTTTGCATTGAAA+CGG + chr4_3:53785906-53785925 None:intergenic 30.0%
!!! TTAGTTTTGGAAAGAACACA+GGG + chr4_3:53785986-53786005 None:intergenic 30.0%
!!! ATTAGTTTTGGAAAGAACAC+AGG + chr4_3:53785987-53786006 None:intergenic 30.0%
!! TTGAAGGACCAAATTAGTTT+TGG + chr4_3:53785999-53786018 None:intergenic 30.0%
CACTAAGGAAAGAAACATTT+AGG + chr4_3:53786074-53786093 None:intergenic 30.0%
! GTGTCTTTTGTTAGTTAGTT+TGG - chr4_3:53786110-53786129 Msa0647710:intron 30.0%
!!! TCAACCTGTCAATTTTTTCT+CGG + chr4_3:53786313-53786332 None:intergenic 30.0%
ACTTTGCAAAGTAAGTGTTA+GGG - chr4_3:53786435-53786454 Msa0647710:intron 30.0%
TCAAAAAAGTCAATCCAAAC+AGG + chr4_3:53786461-53786480 None:intergenic 30.0%
TAAACACATTCAAGACTGTT+TGG - chr4_3:53786496-53786515 Msa0647710:intron 30.0%
AAACACATTCAAGACTGTTT+GGG - chr4_3:53786497-53786516 Msa0647710:intron 30.0%
TTGCTTAGGAAACTTTACAA+TGG + chr4_3:53786789-53786808 None:intergenic 30.0%
CTTCTTTACTAGGAATGTTA+TGG + chr4_3:53786838-53786857 None:intergenic 30.0%
ACATTCCTAGTAAAGAAGAT+TGG - chr4_3:53786840-53786859 Msa0647710:intron 30.0%
AGATTCCAATCTTCTTTACT+AGG + chr4_3:53786848-53786867 None:intergenic 30.0%
GAAGAAAATGAGCTTTCAAA+TGG + chr4_3:53786987-53787006 None:intergenic 30.0%
! CTCATTTTCTTCTTCCATAT+TGG - chr4_3:53786995-53787014 Msa0647710:intron 30.0%
AGAGGATTGATATTTACAGT+AGG + chr4_3:53787059-53787078 None:intergenic 30.0%
TAAATATCAATCCTCTAACG+TGG - chr4_3:53787063-53787082 Msa0647710:intron 30.0%
CTTAAATAAAATGCGGTAGA+AGG - chr4_3:53787155-53787174 Msa0647710:CDS 30.0%
GTATACATCAAAACGATTGT+AGG - chr4_3:53787186-53787205 Msa0647710:CDS 30.0%
! ACACCCTTATCTTTTTATGT+CGG - chr4_3:53787318-53787337 Msa0647710:intron 30.0%
TACCCGACATAAAAAGATAA+GGG + chr4_3:53787324-53787343 None:intergenic 30.0%
ATACCCGACATAAAAAGATA+AGG + chr4_3:53787325-53787344 None:intergenic 30.0%
! TTATCTTTTTATGTCGGGTA+TGG - chr4_3:53787324-53787343 Msa0647710:intron 30.0%
! TATCTTTTTATGTCGGGTAT+GGG - chr4_3:53787325-53787344 Msa0647710:intron 30.0%
CTCATAGTTTACTGATAAGT+GGG - chr4_3:53787355-53787374 Msa0647710:intron 30.0%
AAGTTGTATTATGTAACCCT+AGG - chr4_3:53787426-53787445 Msa0647710:intron 30.0%
! TTTTCTATTATCCAAGCCTA+GGG + chr4_3:53787445-53787464 None:intergenic 30.0%
! ATTTTCTATTATCCAAGCCT+AGG + chr4_3:53787446-53787465 None:intergenic 30.0%
!! AGAACACTCAAATTTTAGCA+TGG + chr4_3:53787516-53787535 None:intergenic 30.0%
TCTTAAAAGTCATCATAAGG+AGG - chr4_3:53787841-53787860 Msa0647710:intron 30.0%
AGCAACTATTTCACAGAAAA+TGG - chr4_3:53787957-53787976 Msa0647710:intron 30.0%
! AGAAAGCATACGAAGAAAAT+TGG - chr4_3:53788209-53788228 Msa0647710:intron 30.0%
!!! ATGTTTTTTCCTCAAATCCT+TGG - chr4_3:53788316-53788335 Msa0647710:CDS 30.0%
TCCTTGGATACTGATATAAT+AGG - chr4_3:53788332-53788351 Msa0647710:CDS 30.0%
TATAATAGGCATGCAATAGA+TGG - chr4_3:53788346-53788365 Msa0647710:CDS 30.0%
! TTAGGCTTGAATCACAATTT+TGG - chr4_3:53788407-53788426 Msa0647710:intron 30.0%
! CTTTGTCTCAATCACAATTT+TGG - chr4_3:53788470-53788489 Msa0647710:intron 30.0%
! TCCATCCACAATTTTCAAAA+TGG - chr4_3:53788517-53788536 Msa0647710:intron 30.0%
!! TCCATTTTGAAAATTGTGGA+TGG + chr4_3:53788521-53788540 None:intergenic 30.0%
!! GTCATCCATTTTGAAAATTG+TGG + chr4_3:53788525-53788544 None:intergenic 30.0%
GGATTATACATAATAGCATG+AGG + chr4_3:53788737-53788756 None:intergenic 30.0%
AAATGATTAGAAAACTGCCA+AGG - chr4_3:53788948-53788967 Msa0647710:intron 30.0%
TATTTGCTCAATTAACTGGA+AGG - chr4_3:53788981-53789000 Msa0647710:intron 30.0%
AAACAACGATGTATGGAAAA+TGG + chr4_3:53789210-53789229 None:intergenic 30.0%
GTATTAGAAACAACGATGTA+TGG + chr4_3:53789217-53789236 None:intergenic 30.0%
! TTTTCCTACTTGTTCTTGAA+AGG - chr4_3:53789246-53789265 Msa0647710:CDS 30.0%
! GAACACCGTATTTTATAGTA+AGG + chr4_3:53789428-53789447 None:intergenic 30.0%
!! AAGTAAACTCTGAAATTTCC+AGG - chr4_3:53789804-53789823 Msa0647710:CDS 30.0%
!! TAATGGATTACTGAAATTCC+TGG + chr4_3:53789825-53789844 None:intergenic 30.0%
! CAAGTTTTCATATAGGAACT+AGG - chr4_3:53789920-53789939 Msa0647710:CDS 30.0%
GTTCACTAAGTTACTTAAAC+TGG - chr4_3:53790277-53790296 Msa0647710:intron 30.0%
! CTACAAACCTTATTTGTTGA+TGG + chr4_3:53790341-53790360 None:intergenic 30.0%
TATACTTGAATTTCGCATTC+TGG + chr4_3:53790749-53790768 None:intergenic 30.0%
! GAGTGTTATTCCAATTGATA+CGG - chr4_3:53790862-53790881 Msa0647710:CDS 30.0%
!! TCAAAGTGATATGGTTTGGT+GGG + chr4_3:53784093-53784112 None:intergenic 35.0%
! TTCAAAGTGATATGGTTTGG+TGG + chr4_3:53784094-53784113 None:intergenic 35.0%
AAAGTGAGAAAGAAAGACAG+TGG + chr4_3:53784133-53784152 None:intergenic 35.0%
TTCCTTCACACATAAACTCA+TGG - chr4_3:53784227-53784246 Msa0647710:three_prime_UTR 35.0%
TTGCATAACATACATGTTGG+CGG + chr4_3:53784383-53784402 None:intergenic 35.0%
TATGTGAATTAAGGACCCTT+TGG - chr4_3:53784568-53784587 Msa0647710:intron 35.0%
TGATACTAGAGGCTTATTTG+AGG - chr4_3:53784634-53784653 Msa0647710:intron 35.0%
! TCGTAAATAGTCTTACAGAC+AGG + chr4_3:53784679-53784698 None:intergenic 35.0%
! GACTTATAATTTGGGATGGA+GGG - chr4_3:53784874-53784893 Msa0647710:CDS 35.0%
!!! ACTGTCATTTTAGATGGCAA+AGG - chr4_3:53784908-53784927 Msa0647710:intron 35.0%
TGTTCAGAGACCTATTTGTA+AGG - chr4_3:53785170-53785189 Msa0647710:CDS 35.0%
GTTCAGAGACCTATTTGTAA+GGG - chr4_3:53785171-53785190 Msa0647710:CDS 35.0%
AAAGTTCAAGAGAACCAGTT+AGG - chr4_3:53785238-53785257 Msa0647710:intron 35.0%
! AGCAAGTTGAAGCAATTGAT+TGG - chr4_3:53785403-53785422 Msa0647710:intron 35.0%
ATCCAATCCCAATAGGAAAA+TGG + chr4_3:53785555-53785574 None:intergenic 35.0%
TATAAGGAGGTAATTCACCT+TGG - chr4_3:53785578-53785597 Msa0647710:intron 35.0%
AAGCTAATGTTTCATCAGAG+TGG - chr4_3:53785917-53785936 Msa0647710:intron 35.0%
TAATGTTTCATCAGAGTGGA+TGG - chr4_3:53785921-53785940 Msa0647710:intron 35.0%
TTTCTACTTCATGATTCCTC+AGG - chr4_3:53785954-53785973 Msa0647710:intron 35.0%
TAACACGTTTGACACATTGA+AGG + chr4_3:53786015-53786034 None:intergenic 35.0%
GTTTCTTTCCTTAGTGAGTT+TGG - chr4_3:53786078-53786097 Msa0647710:intron 35.0%
TTCAAAGACCAAACTCACTA+AGG + chr4_3:53786089-53786108 None:intergenic 35.0%
GTTGAGTTTAATGAGCTTGA+AGG - chr4_3:53786328-53786347 Msa0647710:intron 35.0%
ATTATCCCAAGCAATAGTAG+TGG + chr4_3:53786368-53786387 None:intergenic 35.0%
CTTGGGATAATGATCTTTGT+TGG - chr4_3:53786377-53786396 Msa0647710:intron 35.0%
ATAATGATCTTTGTTGGTCG+TGG - chr4_3:53786383-53786402 Msa0647710:intron 35.0%
TAATGATCTTTGTTGGTCGT+GGG - chr4_3:53786384-53786403 Msa0647710:intron 35.0%
CACTTTGCAAAGTAAGTGTT+AGG - chr4_3:53786434-53786453 Msa0647710:intron 35.0%
TCTTTAGATTATCAGGACTC+AGG - chr4_3:53786714-53786733 Msa0647710:intron 35.0%
ACTATGCATCTTTGTATTGC+AGG - chr4_3:53786754-53786773 Msa0647710:intron 35.0%
CTGCTTAATATCAATGTTGG+AGG + chr4_3:53786815-53786834 None:intergenic 35.0%
TGGCTGCTTAATATCAATGT+TGG + chr4_3:53786818-53786837 None:intergenic 35.0%
AAATGATTCCTCACTTACCA+AGG - chr4_3:53786901-53786920 Msa0647710:intron 35.0%
TTCTTCCATATTGGAAACTC+AGG - chr4_3:53787004-53787023 Msa0647710:intron 35.0%
AACAACCTGAGTTTCCAATA+TGG + chr4_3:53787012-53787031 None:intergenic 35.0%
GATAACACTGCTGAATTTGA+CGG + chr4_3:53787136-53787155 None:intergenic 35.0%
! TCAAAACGATTGTAGGTTGA+AGG - chr4_3:53787193-53787212 Msa0647710:CDS 35.0%
AATCTTCCTAGTCACATACA+TGG + chr4_3:53787289-53787308 None:intergenic 35.0%
! CACCCTTATCTTTTTATGTC+GGG - chr4_3:53787319-53787338 Msa0647710:intron 35.0%
GCTCATAGTTTACTGATAAG+TGG - chr4_3:53787354-53787373 Msa0647710:intron 35.0%
AGTTTACTGATAAGTGGGTA+TGG - chr4_3:53787360-53787379 Msa0647710:intron 35.0%
CTATATATCCAACTGCAGAA+TGG + chr4_3:53787477-53787496 None:intergenic 35.0%
CATTCTGCAGTTGGATATAT+AGG - chr4_3:53787475-53787494 Msa0647710:intron 35.0%
TTTCTGTGAAATAGTTGCTC+TGG + chr4_3:53787956-53787975 None:intergenic 35.0%
TTGAACTTGACTTACTTACC+AGG - chr4_3:53788050-53788069 Msa0647710:intron 35.0%
TATCAAAGTCCTAAGCAACA+AGG + chr4_3:53788080-53788099 None:intergenic 35.0%
!!! TTTTTGGTTATACAGTCCGA+AGG - chr4_3:53788161-53788180 Msa0647710:intron 35.0%
AAGCATACGAAGAAAATTGG+AGG - chr4_3:53788212-53788231 Msa0647710:intron 35.0%
TATCAGTATCCAAGGATTTG+AGG + chr4_3:53788328-53788347 None:intergenic 35.0%
GCCTATTATATCAGTATCCA+AGG + chr4_3:53788336-53788355 None:intergenic 35.0%
ATCATCGAAATGTATAGGGT+GGG + chr4_3:53788553-53788572 None:intergenic 35.0%
TATCATCGAAATGTATAGGG+TGG + chr4_3:53788554-53788573 None:intergenic 35.0%
AGGGGCCAAAATAGTAAATA+AGG - chr4_3:53788641-53788660 Msa0647710:intron 35.0%
TGTATAATCCAACCCTAGAT+TGG - chr4_3:53788747-53788766 Msa0647710:CDS 35.0%
ACTTCCAAAGTTCCAATCTA+GGG + chr4_3:53788762-53788781 None:intergenic 35.0%
TGAAATAGCATGTTGAGTGT+TGG + chr4_3:53788799-53788818 None:intergenic 35.0%
ATGATTGTAAGCAGATGCAA+TGG + chr4_3:53788834-53788853 None:intergenic 35.0%
! CAATCATTTTAGACCTTCCT+AGG - chr4_3:53788847-53788866 Msa0647710:intron 35.0%
ATTCATCATCCTGTTAACCT+AGG + chr4_3:53788867-53788886 None:intergenic 35.0%
GCAAATAAATGTTGGATCCT+TGG + chr4_3:53788968-53788987 None:intergenic 35.0%
!!! AGAGGCACAAGTTTTAATTG+CGG - chr4_3:53789172-53789191 Msa0647710:intron 35.0%
!!! CAAGTTTTAATTGCGGAAAC+AGG - chr4_3:53789179-53789198 Msa0647710:intron 35.0%
AAGTCCTTTCAAGAACAAGT+AGG + chr4_3:53789253-53789272 None:intergenic 35.0%
ATGTCACATTCAGTTTGCAT+AGG - chr4_3:53789571-53789590 Msa0647710:intron 35.0%
CTTGTTCGTCTCCAAAAAAT+AGG + chr4_3:53789724-53789743 None:intergenic 35.0%
!! TTTTGGAGACGAACAAGAAT+TGG - chr4_3:53789727-53789746 Msa0647710:CDS 35.0%
ATTCGTGGTAAAAAACAGTC+CGG + chr4_3:53789889-53789908 None:intergenic 35.0%
CTTGCAAATGTTATGATTCG+TGG + chr4_3:53789904-53789923 None:intergenic 35.0%
! AGCAATCTTTTTGCAGTGAA+TGG + chr4_3:53790072-53790091 None:intergenic 35.0%
!!! CAATCTACTTTTTGTCTCAG+AGG + chr4_3:53790308-53790327 None:intergenic 35.0%
ATGAGCTCCATCAACAAATA+AGG - chr4_3:53790331-53790350 Msa0647710:intron 35.0%
!! ACATACTAAGTGTTGAGAAG+TGG + chr4_3:53790595-53790614 None:intergenic 35.0%
ATAGAAGTTGTGTAAGCACA+AGG + chr4_3:53790823-53790842 None:intergenic 35.0%
AGTCAAATGAACACCCAATT+TGG + chr4_3:53790943-53790962 None:intergenic 35.0%
!! GTTGAAGTGTTGAACTTGAG+AGG + chr4_3:53784157-53784176 None:intergenic 40.0%
AACATGAGGGAGATGGAAAA+TGG + chr4_3:53784206-53784225 None:intergenic 40.0%
TGTGTGAAGGAAGAACATGA+GGG + chr4_3:53784219-53784238 None:intergenic 40.0%
ATGTGTGAAGGAAGAACATG+AGG + chr4_3:53784220-53784239 None:intergenic 40.0%
TGCCATGAGTTTATGTGTGA+AGG + chr4_3:53784232-53784251 None:intergenic 40.0%
TCTTGGAAACATGAGGTACA+AGG + chr4_3:53784314-53784333 None:intergenic 40.0%
TCATGTTGTGTTCAGTGCAT+TGG + chr4_3:53784480-53784499 None:intergenic 40.0%
! CGACTTATAATTTGGGATGG+AGG - chr4_3:53784873-53784892 Msa0647710:CDS 40.0%
AGGTAGCATCCCTTACAAAT+AGG + chr4_3:53785183-53785202 None:intergenic 40.0%
GGATGCTACCTTTCAATGAA+TGG - chr4_3:53785192-53785211 Msa0647710:CDS 40.0%
GGCTATGTACAGTCTCAAAA+TGG - chr4_3:53785305-53785324 Msa0647710:intron 40.0%
! TCTCCATTTTGTACCTCATC+TGG - chr4_3:53785351-53785370 Msa0647710:intron 40.0%
ATGCCAGATGAGGTACAAAA+TGG + chr4_3:53785357-53785376 None:intergenic 40.0%
CAATGCTAACCAAGTTTCCA+GGG + chr4_3:53785494-53785513 None:intergenic 40.0%
!! AGTCACAGCCATTTTCCTAT+TGG - chr4_3:53785544-53785563 Msa0647710:intron 40.0%
!! GTCACAGCCATTTTCCTATT+GGG - chr4_3:53785545-53785564 Msa0647710:intron 40.0%
!! AGCCATTTTCCTATTGGGAT+TGG - chr4_3:53785550-53785569 Msa0647710:intron 40.0%
GGGATTGGATATCTATAAGG+AGG - chr4_3:53785565-53785584 Msa0647710:intron 40.0%
AATAGTAGCTGTGGCATAGA+AGG + chr4_3:53785802-53785821 None:intergenic 40.0%
TGACACTACCTCACACATTT+AGG - chr4_3:53786235-53786254 Msa0647710:CDS 40.0%
GACACTACCTCACACATTTA+GGG - chr4_3:53786236-53786255 Msa0647710:CDS 40.0%
CTAGCCGAGAAAAAATTGAC+AGG - chr4_3:53786306-53786325 Msa0647710:intron 40.0%
GAGTTTAATGAGCTTGAAGG+AGG - chr4_3:53786331-53786350 Msa0647710:intron 40.0%
TGCTTACCACTACTATTGCT+TGG - chr4_3:53786359-53786378 Msa0647710:intron 40.0%
GCTTACCACTACTATTGCTT+GGG - chr4_3:53786360-53786379 Msa0647710:intron 40.0%
ACTGTTTGGGAGAGCTTAAT+TGG - chr4_3:53786510-53786529 Msa0647710:intron 40.0%
! CTTATTTCCACAAGCTCTGA+AGG - chr4_3:53786567-53786586 Msa0647710:intron 40.0%
TTAGATTATCAGGACTCAGG+AGG - chr4_3:53786717-53786736 Msa0647710:intron 40.0%
TGTAGTTACCTTGGTAAGTG+AGG + chr4_3:53786912-53786931 None:intergenic 40.0%
AGCATGAGATGTAGTTACCT+TGG + chr4_3:53786921-53786940 None:intergenic 40.0%
!! AACGTGGTTAGCTTGTCTAA+AGG - chr4_3:53787079-53787098 Msa0647710:intron 40.0%
!! GTTAGCTTGTCTAAAGGTAC+TGG - chr4_3:53787085-53787104 Msa0647710:intron 40.0%
! AAACGATTGTAGGTTGAAGG+TGG - chr4_3:53787196-53787215 Msa0647710:CDS 40.0%
TAGGTGGCTGAAGGAAAAAT+TGG + chr4_3:53787231-53787250 None:intergenic 40.0%
ACTGTGTTTCCGATAAATGC+CGG + chr4_3:53787259-53787278 None:intergenic 40.0%
AGTATGCCATGTATGTGACT+AGG - chr4_3:53787280-53787299 Msa0647710:intron 40.0%
TGATAAGTGGGTATGGTTCA+GGG - chr4_3:53787367-53787386 Msa0647710:intron 40.0%
GTATTATGTAACCCTAGGCT+TGG - chr4_3:53787431-53787450 Msa0647710:intron 40.0%
ATAGGTTAGAACAACAACCC+TGG + chr4_3:53787574-53787593 None:intergenic 40.0%
CCAAAGCTTCACTAGTGATA+TGG + chr4_3:53787985-53788004 None:intergenic 40.0%
CCATATCACTAGTGAAGCTT+TGG - chr4_3:53787982-53788001 Msa0647710:intron 40.0%
GTAAACTCAATGTCGTCCTT+CGG + chr4_3:53788180-53788199 None:intergenic 40.0%
ATAGGCATGCAATAGATGGA+AGG - chr4_3:53788350-53788369 Msa0647710:CDS 40.0%
TCTAGGCAGATTCTCACTTA+GGG - chr4_3:53788622-53788641 Msa0647710:intron 40.0%
GACTTCCAAAGTTCCAATCT+AGG + chr4_3:53788763-53788782 None:intergenic 40.0%
TTAGACCTTCCTAGGTTAAC+AGG - chr4_3:53788855-53788874 Msa0647710:intron 40.0%
ATCATCCTGTTAACCTAGGA+AGG + chr4_3:53788863-53788882 None:intergenic 40.0%
GAAAACAAGCGCGTAGTTAA+AGG + chr4_3:53788890-53788909 None:intergenic 40.0%
TGGAAGGTTAAGAAACGAAG+AGG - chr4_3:53788997-53789016 Msa0647710:intron 40.0%
GTTAAGAAACGAAGAGGATG+AGG - chr4_3:53789003-53789022 Msa0647710:intron 40.0%
AAAACTTGTGCCTCTTCTGT+TGG + chr4_3:53789167-53789186 None:intergenic 40.0%
! GTTTTCACTTCAACTCGCTT+TGG - chr4_3:53789394-53789413 Msa0647710:intron 40.0%
!! TGTTCAGAAGTGTTTGATCG+AGG - chr4_3:53789443-53789462 Msa0647710:intron 40.0%
!! GTTCAGAAGTGTTTGATCGA+GGG - chr4_3:53789444-53789463 Msa0647710:intron 40.0%
CTAGGTGCTTTGATATATGC+TGG - chr4_3:53789938-53789957 Msa0647710:CDS 40.0%
GCTTTGATATATGCTGGAAC+TGG - chr4_3:53789944-53789963 Msa0647710:CDS 40.0%
ATATGCTGGAACTGGAATAG+TGG - chr4_3:53789952-53789971 Msa0647710:CDS 40.0%
GCTAGAACTCAAAACATCTC+AGG - chr4_3:53790006-53790025 Msa0647710:intron 40.0%
CCGCTATTTGACAACACTAT+CGG + chr4_3:53790226-53790245 None:intergenic 40.0%
CCGATAGTGTTGTCAAATAG+CGG - chr4_3:53790223-53790242 Msa0647710:intron 40.0%
ATTCCAATTGATACGGAGCA+TGG - chr4_3:53790869-53790888 Msa0647710:CDS 40.0%
AATTGCAATTATGGAGAGGG+AGG - chr4_3:53790908-53790927 Msa0647710:CDS 40.0%
GAGGAGATTTGGACCAAATT+GGG - chr4_3:53790927-53790946 Msa0647710:exon 40.0%
GTGAGAAAGAAAGACAGTGG+TGG + chr4_3:53784130-53784149 None:intergenic 45.0%
AAGGAAGAACATGAGGGAGA+TGG + chr4_3:53784213-53784232 None:intergenic 45.0%
CGTTGTCTCTTGGAAACATG+AGG + chr4_3:53784321-53784340 None:intergenic 45.0%
CTGTTGTTGTCGTTGTCTCT+TGG + chr4_3:53784331-53784350 None:intergenic 45.0%
CATAACATACATGTTGGCGG+TGG + chr4_3:53784380-53784399 None:intergenic 45.0%
! TGTGTTCAGTGCATTGGTGA+TGG + chr4_3:53784474-53784493 None:intergenic 45.0%
AAAAGCTTGAGTCGGTCCTT+GGG - chr4_3:53785067-53785086 Msa0647710:intron 45.0%
AAAACTTGATATCCGGCCCA+AGG + chr4_3:53785086-53785105 None:intergenic 45.0%
AACTCTCACTATGCCAGATG+AGG + chr4_3:53785367-53785386 None:intergenic 45.0%
ATCTGGCATAGTGAGAGTTG+AGG - chr4_3:53785368-53785387 Msa0647710:intron 45.0%
GAGAGTTGAGGTTCCTATTG+AGG - chr4_3:53785380-53785399 Msa0647710:intron 45.0%
! GCTTCAACTTGCTCCTCAAT+AGG + chr4_3:53785396-53785415 None:intergenic 45.0%
AGTAGCATCTAGGAAGCAGA+AGG + chr4_3:53785446-53785465 None:intergenic 45.0%
! CTTCCTAGATGCTACTTCTC+TGG - chr4_3:53785450-53785469 Msa0647710:intron 45.0%
TTGCCAGAGAAGTAGCATCT+AGG + chr4_3:53785456-53785475 None:intergenic 45.0%
! TAGATGCTACTTCTCTGGCA+AGG - chr4_3:53785455-53785474 Msa0647710:intron 45.0%
AAGGAACAGAAATCTTGCCC+TGG - chr4_3:53785474-53785493 Msa0647710:intron 45.0%
GAAATCTTGCCCTGGAAACT+TGG - chr4_3:53785482-53785501 Msa0647710:intron 45.0%
GCAATGCTAACCAAGTTTCC+AGG + chr4_3:53785495-53785514 None:intergenic 45.0%
GGAAACTTGGTTAGCATTGC+TGG - chr4_3:53785495-53785514 Msa0647710:intron 45.0%
TTGGTTAGCATTGCTGGTGT+TGG - chr4_3:53785501-53785520 Msa0647710:intron 45.0%
AAATGGCTGTGACTGCGAAA+AGG + chr4_3:53785538-53785557 None:intergenic 45.0%
CTCCATATGCGCGAATCAAA+GGG + chr4_3:53785879-53785898 None:intergenic 45.0%
! TCATCAGAGTGGATGGCTTT+TGG - chr4_3:53785928-53785947 Msa0647710:intron 45.0%
! TGTGTGAGGTAGTGTCACTA+TGG + chr4_3:53786232-53786251 None:intergenic 45.0%
GTTTGGTCCCTAAATGTGTG+AGG + chr4_3:53786246-53786265 None:intergenic 45.0%
TCTTTGTTGGTCGTGGGAAA+AGG - chr4_3:53786390-53786409 Msa0647710:intron 45.0%
AGTAAGTGTTAGGGCCTGTT+TGG - chr4_3:53786444-53786463 Msa0647710:intron 45.0%
AAGCTATCCTTCAGAGCTTG+TGG + chr4_3:53786577-53786596 None:intergenic 45.0%
! AATGTTGGAGGAGCTTGCTT+AGG + chr4_3:53786803-53786822 None:intergenic 45.0%
! AAACTCAGGTTGTTCTAGCG+CGG - chr4_3:53787018-53787037 Msa0647710:intron 45.0%
AGACAAGCTAACCACGTTAG+AGG + chr4_3:53787077-53787096 None:intergenic 45.0%
ATAAATGCCGGTGCATTAGG+TGG + chr4_3:53787247-53787266 None:intergenic 45.0%
! CCTAATGCACCGGCATTTAT+CGG - chr4_3:53787247-53787266 Msa0647710:intron 45.0%
CTGATAAGTGGGTATGGTTC+AGG - chr4_3:53787366-53787385 Msa0647710:intron 45.0%
GATAAGTGGGTATGGTTCAG+GGG - chr4_3:53787368-53787387 Msa0647710:intron 45.0%
ATAAGTGGGTATGGTTCAGG+GGG - chr4_3:53787369-53787388 Msa0647710:intron 45.0%
TACTGCAACCATTCTGCAGT+TGG - chr4_3:53787466-53787485 Msa0647710:intron 45.0%
! ATCACTAGTGAAGCTTTGGC+CGG - chr4_3:53787986-53788005 Msa0647710:intron 45.0%
CCTAAGCAACAAGGTAAACC+TGG + chr4_3:53788071-53788090 None:intergenic 45.0%
! CCAGGTTTACCTTGTTGCTT+AGG - chr4_3:53788068-53788087 Msa0647710:intron 45.0%
TCGATGATGTGACACTGTCT+AGG - chr4_3:53788605-53788624 Msa0647710:intron 45.0%
GTCTAGGCAGATTCTCACTT+AGG - chr4_3:53788621-53788640 Msa0647710:intron 45.0%
CTAGGCAGATTCTCACTTAG+GGG - chr4_3:53788623-53788642 Msa0647710:intron 45.0%
! CCAAAGTTCCAATCTAGGGT+TGG + chr4_3:53788758-53788777 None:intergenic 45.0%
CCAACCCTAGATTGGAACTT+TGG - chr4_3:53788755-53788774 Msa0647710:CDS 45.0%
TTGTGGCTTTCCAACAGAAG+AGG - chr4_3:53789154-53789173 Msa0647710:intron 45.0%
TTTGATCGAGGGATGTATGC+TGG - chr4_3:53789455-53789474 Msa0647710:intron 45.0%
AAGCAACCCATACTTGGAGT+GGG - chr4_3:53789979-53789998 Msa0647710:CDS 45.0%
GAATTTCGCATTCTGGTGCA+TGG + chr4_3:53790742-53790761 None:intergenic 45.0%
ATGCCATGCTCCGTATCAAT+TGG + chr4_3:53790875-53790894 None:intergenic 45.0%
TTATGGAGAGGGAGGAGATT+TGG - chr4_3:53790916-53790935 Msa0647710:CDS 45.0%
GGAGGAGATTTGGACCAAAT+TGG - chr4_3:53790926-53790945 Msa0647710:exon 45.0%
!!! ATTTTATTTTATTTTCATTT+TGG - chr4_3:53784506-53784525 Msa0647710:intron 5.0%
TGTGAGCCACTTGTGTGTAG+TGG + chr4_3:53784262-53784281 None:intergenic 50.0%
CAAAAGCTTGAGTCGGTCCT+TGG - chr4_3:53785066-53785085 Msa0647710:intron 50.0%
CGCGTTTCTATCGTCCTAAC+TGG + chr4_3:53785255-53785274 None:intergenic 50.0%
ATTGCAGCTGATGCTACTGG+TGG + chr4_3:53785285-53785304 None:intergenic 50.0%
ACCAGTAGCATCAGCTGCAA+TGG - chr4_3:53785284-53785303 Msa0647710:intron 50.0%
AGCATCTAGGAAGCAGAAGG+TGG + chr4_3:53785443-53785462 None:intergenic 50.0%
TAGCTGTGGCATAGAAGGCA+GGG + chr4_3:53785797-53785816 None:intergenic 50.0%
! TGCCCTTTGATTCGCGCATA+TGG - chr4_3:53785874-53785893 Msa0647710:intron 50.0%
CCTCCATATGCGCGAATCAA+AGG + chr4_3:53785880-53785899 None:intergenic 50.0%
! CCTTTGATTCGCGCATATGG+AGG - chr4_3:53785877-53785896 Msa0647710:intron 50.0%
!! TGTTTCTTGAAGTGCCGCGA+TGG + chr4_3:53786416-53786435 None:intergenic 50.0%
CCGATAAATGCCGGTGCATT+AGG + chr4_3:53787250-53787269 None:intergenic 50.0%
TTATGTCGGGTATGGGCGTA+TGG - chr4_3:53787332-53787351 Msa0647710:intron 50.0%
TAGTGATGGTCCTCTAGCAC+GGG + chr4_3:53788014-53788033 None:intergenic 50.0%
CTAGTGATGGTCCTCTAGCA+CGG + chr4_3:53788015-53788034 None:intergenic 50.0%
TGACGGTCTAGTGCTAGTGA+TGG + chr4_3:53788028-53788047 None:intergenic 50.0%
!! AACTACGCGCTTGTTTTCGC+AGG - chr4_3:53788892-53788911 Msa0647710:intron 50.0%
AGCCACAAACTGCAGGACTT+GGG + chr4_3:53789142-53789161 None:intergenic 50.0%
AAGCCACAAACTGCAGGACT+TGG + chr4_3:53789143-53789162 None:intergenic 50.0%
GTTGGAAAGCCACAAACTGC+AGG + chr4_3:53789149-53789168 None:intergenic 50.0%
TGTATGCTGGACCTGTTGGT+TGG - chr4_3:53789468-53789487 Msa0647710:intron 50.0%
CAATGCTGACCTGATGCCAA+CGG + chr4_3:53789519-53789538 None:intergenic 50.0%
! GCTGGAACTGGAATAGTGGA+AGG - chr4_3:53789956-53789975 Msa0647710:CDS 50.0%
GGAAGGAAGCAACCCATACT+TGG - chr4_3:53789973-53789992 Msa0647710:CDS 50.0%
GAAGCAACCCATACTTGGAG+TGG - chr4_3:53789978-53789997 Msa0647710:CDS 50.0%
GCTCATCCCACTCCAAGTAT+GGG + chr4_3:53789988-53790007 None:intergenic 50.0%
AGCTCATCCCACTCCAAGTA+TGG + chr4_3:53789989-53790008 None:intergenic 50.0%
CAACCGCCACTACACACAAG+TGG - chr4_3:53784253-53784272 Msa0647710:three_prime_UTR 55.0%
GAGCCACTTGTGTGTAGTGG+CGG + chr4_3:53784259-53784278 None:intergenic 55.0%
GCCATTGCAGCTGATGCTAC+TGG + chr4_3:53785288-53785307 None:intergenic 55.0%
TAGAAGGCAGGGTGCAGAAG+AGG + chr4_3:53785786-53785805 None:intergenic 55.0%
GTAGCTGTGGCATAGAAGGC+AGG + chr4_3:53785798-53785817 None:intergenic 55.0%
GAACACAGGGTATGCACCTG+AGG + chr4_3:53785973-53785992 None:intergenic 55.0%
CCTTCAGCCACCTAATGCAC+CGG - chr4_3:53787237-53787256 Msa0647710:intron 55.0%
TTCGCAGGCAGTCTGCGAAA+AGG - chr4_3:53788907-53788926 Msa0647710:intron 55.0%
CACCCAAGTCCTGCAGTTTG+TGG - chr4_3:53789137-53789156 Msa0647710:intron 55.0%
GGGATGTATGCTGGACCTGT+TGG - chr4_3:53789464-53789483 Msa0647710:intron 55.0%
! GCTGGACCTGTTGGTTGGTT+TGG - chr4_3:53789473-53789492 Msa0647710:intron 55.0%
!! GGACCTGTTGGTTGGTTTGG+AGG - chr4_3:53789476-53789495 Msa0647710:intron 55.0%
CCTCCTCCAAACCAACCAAC+AGG + chr4_3:53789482-53789501 None:intergenic 55.0%
!! CCTGTTGGTTGGTTTGGAGG+AGG - chr4_3:53789479-53789498 Msa0647710:intron 55.0%
GTGAGTTTGCCGTTGGCATC+AGG - chr4_3:53789507-53789526 Msa0647710:intron 55.0%
CGTTGGCATCAGGTCAGCAT+TGG - chr4_3:53789517-53789536 Msa0647710:intron 55.0%
! TGGCATCAGGTCAGCATTGG+TGG - chr4_3:53789520-53789539 Msa0647710:intron 55.0%
!! CAGGTCAGCATTGGTGGAAC+AGG - chr4_3:53789526-53789545 Msa0647710:intron 55.0%
GTCGTGGGAAAAGGCCATCG+CGG - chr4_3:53786399-53786418 Msa0647710:intron 60.0%
CCGGTGCATTAGGTGGCTGA+AGG + chr4_3:53787240-53787259 None:intergenic 60.0%
TGGTCCTCTAGCACGGGTTC+CGG + chr4_3:53788008-53788027 None:intergenic 60.0%
GGCGAGAGTGAGTTTGCCGT+TGG - chr4_3:53789500-53789519 Msa0647710:intron 60.0%
GCTTGAGTCGGTCCTTGGGC+CGG - chr4_3:53785071-53785090 Msa0647710:intron 65.0%
TTGGCCGGAACCCGTGCTAG+AGG - chr4_3:53788001-53788020 Msa0647710:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 53784048 53791133 53784048 ID=Msa0647710;Name=Msa0647710
chr4_3 mRNA 53784048 53791133 53784048 ID=Msa0647710-mRNA-1;Parent=Msa0647710;Name=Msa0647710-mRNA-1;_AED=0.13;_eAED=0.13;_QI=198|1|1|1|0.92|0.86|15|344|566
chr4_3 exon 53784048 53784373 53784048 ID=Msa0647710-mRNA-1:exon:13539;Parent=Msa0647710-mRNA-1
chr4_3 exon 53784829 53784903 53784829 ID=Msa0647710-mRNA-1:exon:13538;Parent=Msa0647710-mRNA-1
chr4_3 exon 53785154 53785246 53785154 ID=Msa0647710-mRNA-1:exon:13537;Parent=Msa0647710-mRNA-1
chr4_3 exon 53785634 53785731 53785634 ID=Msa0647710-mRNA-1:exon:13536;Parent=Msa0647710-mRNA-1
chr4_3 exon 53785981 53786065 53785981 ID=Msa0647710-mRNA-1:exon:13535;Parent=Msa0647710-mRNA-1
chr4_3 exon 53786157 53786267 53786157 ID=Msa0647710-mRNA-1:exon:13534;Parent=Msa0647710-mRNA-1
chr4_3 exon 53786948 53787005 53786948 ID=Msa0647710-mRNA-1:exon:13533;Parent=Msa0647710-mRNA-1
chr4_3 exon 53787110 53787228 53787110 ID=Msa0647710-mRNA-1:exon:13532;Parent=Msa0647710-mRNA-1
chr4_3 exon 53787905 53787973 53787905 ID=Msa0647710-mRNA-1:exon:13531;Parent=Msa0647710-mRNA-1
chr4_3 exon 53788081 53788155 53788081 ID=Msa0647710-mRNA-1:exon:13530;Parent=Msa0647710-mRNA-1
chr4_3 exon 53788259 53788405 53788259 ID=Msa0647710-mRNA-1:exon:13529;Parent=Msa0647710-mRNA-1
chr4_3 exon 53788737 53788853 53788737 ID=Msa0647710-mRNA-1:exon:13528;Parent=Msa0647710-mRNA-1
chr4_3 exon 53789206 53789323 53789206 ID=Msa0647710-mRNA-1:exon:13527;Parent=Msa0647710-mRNA-1
chr4_3 exon 53789595 53790004 53789595 ID=Msa0647710-mRNA-1:exon:13526;Parent=Msa0647710-mRNA-1
chr4_3 exon 53790792 53791133 53790792 ID=Msa0647710-mRNA-1:exon:13525;Parent=Msa0647710-mRNA-1
chr4_3 five_prime_UTR 53790936 53791133 53790936 ID=Msa0647710-mRNA-1:five_prime_utr;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53790792 53790935 53790792 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53789595 53790004 53789595 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53789206 53789323 53789206 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53788737 53788853 53788737 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53788259 53788405 53788259 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53788081 53788155 53788081 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53787905 53787973 53787905 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53787110 53787228 53787110 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53786948 53787005 53786948 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53786157 53786267 53786157 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53785981 53786065 53785981 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53785634 53785731 53785634 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53785154 53785246 53785154 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 CDS 53784847 53784903 53784847 ID=Msa0647710-mRNA-1:cds;Parent=Msa0647710-mRNA-1
chr4_3 three_prime_UTR 53784829 53784846 53784829 ID=Msa0647710-mRNA-1:three_prime_utr;Parent=Msa0647710-mRNA-1
chr4_3 three_prime_UTR 53784048 53784373 53784048 ID=Msa0647710-mRNA-1:three_prime_utr;Parent=Msa0647710-mRNA-1
Gene Sequence

>Msa0647710

ATGGCAACAACCGCCACTACACACAAGTGGCTCACAAACTTTATCAACACAAATGGCTGCAATATCCTTGTACCTCATGTTTCCAAGAGACAACGACAACAACAGCATCATCAACAATCTATGTATCTTATCCACCGCCAACATAGACCTATTTGTAAGGGATGCTACCTTTCAATGAATGGTTGTAAAGAAGGAGAAATAAATAAAAGTTCAAGAGAACCAGTTAGGACGATAGAAACGCGAACATTGCCACCAGTAGCATCAGCTGCAATGGCTATGTACAGTCTCAAAATGGCTATTTCAGAGCTAAAAGAAATCTCTCCATTTTGTACCTCATCTGGCATAGTGAGAGTTGAGGTTCCTATTGAGGAGCAAGTTGAAGCAATTGATTGGCTTCATTCACAAAACCACCTTCTGCTTCCTAGATGCTACTTCTCTGGCAAGGAACAGAAATCTTGCCCTGGAAACTTGGTTAGCATTGCTGGTGTTGGTTCTGCTGTTTCCTTTTCGCAGTCACAGCCATTTTCCTATTGGGATTGGATATCTATAAGGAGGTTTCTTTCTGAGAGCTGCCCTTTGATTCGCGCATATGGAGGTATCCGTTTCAATGCAAAAGCTAATGTTTCATCAGAGTGGATGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAGTTTAATGAGCTTGAAGGAGGATCAATGCTTACCACTACTATTGCTTGGGATAATGATCTTTGTTGGTCGTGGGAAAAGGCCATCGCGGCACTTCAAGAAACACTTTGCAAAGTTTCTACTTCCATTGTAAAGTTTCCTAAGCAAGCTCCTCCAACATTGATATTAAGCAGCCATAACATTCCTAGTAAAGAAGATTGGAATCTTGCTGTTAATAGAGCTTTGCAGATGATAGAGCAAAATGATTCCTCACTTACCAAGGTTGTTCTAGCGCGGAGCACTAGAGTAGTGCCTACTGTAAATATCAATCCTCTAACGTGGTTAGCTTGTCTAAAGGTTGAAGGTGGAAATGCTTACCAATTTTTCCTTCAGCCACCTAATGCACCGGCATTTATCGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTCCATATCACTAGTGAAGCTTTGGCCGGAACCCGTGCTAGAGGACCATCACTAGCACTAGACCGTCAAATTGAACTTGACTTACTTACCAGTCCGAAGGACGACATTGAGTTTACTATAGTAAGAGAAAGCATACGAAGAAAATTGGAGGCAGTCTGCGAAAAGGTTATAATCGAGCCAAAGAAAATGATTAGAAAACTGCCAAGGATCCAACATTTATTTGCTCAATTAACTGGAAGGTTAAGAAACGAAGAGGATGAGTTTGAAATTTTGTCATCACTTCACCCAAGTCCTGCAGTTTGTGGCTTTCCAACAGAAGAGGCACAAGTTTTAATTGCGGAAACAGAAGTGTTTGATCGAGGGATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGGCGAGAGTGAGTTTGCCGTTGGCATCAGGTCAGCATTGGTGGAACAGGAACTAGGTGCTTTGATATATGCTGGAACTGGAATAGTGGAAGGAAGCAACCCATACTTGGAGTGGGATGAGCTAGAACTCAAAACATCTCAGTTCACTAAGTTACTTAAACTGGACTTGCCTCTGAGACAAAAAGTAGATTGTAAATGA

Protein sequence

>Msa0647710

MATTATTHKWLTNFINTNGCNILVPHVSKRQRQQQHHQQSMYLIHRQHRPICKGCYLSMNGCKEGEINKSSREPVRTIETRTLPPVASAAMAMYSLKMAISELKEISPFCTSSGIVRVEVPIEEQVEAIDWLHSQNHLLLPRCYFSGKEQKSCPGNLVSIAGVGSAVSFSQSQPFSYWDWISIRRFLSESCPLIRAYGGIRFNAKANVSSEWMAFGSFYFMIPQVEFNELEGGSMLTTTIAWDNDLCWSWEKAIAALQETLCKVSTSIVKFPKQAPPTLILSSHNIPSKEDWNLAVNRALQMIEQNDSSLTKVVLARSTRVVPTVNINPLTWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGPSLALDRQIELDLLTSPKDDIEFTIVRESIRRKLEAVCEKVIIEPKKMIRKLPRIQHLFAQLTGRLRNEEDEFEILSSLHPSPAVCGFPTEEAQVLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEQELGALIYAGTGIVEGSNPYLEWDELELKTSQFTKLLKLDLPLRQKVDCK*