AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690530 MtrunA17_Chr4g0039031 96.473 567 20 0 1 567 1 567 0.0 1134
Msa0690530 MtrunA17_Chr7g0217861 94.017 117 7 0 433 549 1 117 9.90e-74 231
Msa0690530 MtrunA17_Chr8g0368521 32.812 192 118 5 81 265 79 266 6.62e-18 88.2
Msa0690530 MtrunA17_Chr3g0116881 24.925 333 208 9 252 556 252 570 1.35e-14 76.6
Msa0690530 MtrunA17_Chr1g0199851 25.000 300 210 10 259 547 371 666 1.32e-13 73.9
Msa0690530 MtrunA17_Chr3g0107391 24.625 333 209 9 252 556 275 593 2.27e-13 72.8
Msa0690530 MtrunA17_Chr3g0113261 24.925 333 208 9 252 556 276 594 5.31e-13 71.6
Msa0690530 MtrunA17_Chr1g0211991 26.421 299 192 7 278 556 270 560 9.42e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690530 AT1G18870.1 55.121 537 218 5 34 555 25 553 0.0 590
Msa0690530 AT1G18870.2 56.360 511 200 5 60 555 1 503 0.0 582
Msa0690530 AT1G74710.1 54.221 533 215 5 47 557 35 560 0.0 582
Msa0690530 AT1G74710.2 53.861 531 216 5 47 555 35 558 0.0 573
Msa0690530 AT1G18870.3 52.142 537 210 6 34 555 25 529 0.0 538
Msa0690530 AT1G68890.1 29.915 234 150 6 44 267 43 272 1.17e-20 97.4
Msa0690530 AT2G29690.1 27.309 249 148 4 328 556 365 600 6.72e-14 75.1

Find 170 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATAAAATTGCAATTA+TGG 0.163087 4_4:+58379702 Msa0690530:three_prime_UTR
AAGAATACAAACTAATTAAA+TGG 0.195310 4_4:+58372945 Msa0690530:five_prime_UTR
TTTCTTTGCTTTAGATATTA+TGG 0.207430 4_4:+58379597 Msa0690530:intron
AGCTCATCCCACTCCAAGTA+TGG 0.248367 4_4:-58378789 None:intergenic
CATTTATTTGCTCAATTAAC+TGG 0.264103 4_4:+58377780 Msa0690530:CDS
GGAGGAGATTTGGACCAAAT+TGG 0.264110 4_4:+58379729 Msa0690530:three_prime_UTR
AGCAACTATTTCACAGAAAA+TGG 0.276767 4_4:+58376760 Msa0690530:CDS
AGAAAGCATACGAAGAAAAT+TGG 0.278150 4_4:+58377012 Msa0690530:CDS
GGAAACTTGGTTAGCATTGC+TGG 0.279230 4_4:+58374377 Msa0690530:CDS
TCATCAGAGTGGATGGCTTT+TGG 0.282890 4_4:+58374810 Msa0690530:CDS
CGCGTTTCTATCGTCCTAAC+TGG 0.284030 4_4:-58374134 None:intergenic
CTACAAACCTTATTTGTTGA+TGG 0.300442 4_4:-58379141 None:intergenic
CCGATAAATGCCGGTGCATT+AGG 0.301055 4_4:-58376129 None:intergenic
CACCCAAGTCCTGCAGTTTG+TGG 0.304536 4_4:+58377940 Msa0690530:CDS
GCTGGACCTGTTGGTTGGTT+TGG 0.311172 4_4:+58378276 Msa0690530:CDS
TTATGGAGAGGGAGGAGATT+TGG 0.314731 4_4:+58379719 Msa0690530:three_prime_UTR
GTTCACTAAGTTACTTAAAC+TGG 0.317030 4_4:+58379080 Msa0690530:intron
AGACAAGCTAACCACGTTAG+AGG 0.324370 4_4:-58375957 None:intergenic
CTTCTTTACTAGGAATGTTA+TGG 0.328879 4_4:-58375718 None:intergenic
ATCCAATCCCAATAGGAAAA+TGG 0.334738 4_4:-58374434 None:intergenic
GCTTCAACTTGCTCCTCAAT+AGG 0.339305 4_4:-58374275 None:intergenic
CCAAAGCTTCACTAGTGATA+TGG 0.351321 4_4:-58376785 None:intergenic
GGCTATGTACAGTCTCAAAA+TGG 0.363690 4_4:+58374187 Msa0690530:CDS
CATTACTTTAAGAACAACTT+TGG 0.366850 4_4:-58379892 None:intergenic
ATATAATACAACATGTACTA+TGG 0.367333 4_4:-58379778 None:intergenic
CCTAATGCACCGGCATTTAT+CGG 0.372337 4_4:+58376129 Msa0690530:CDS
AGGTAGCATCCCTTACAAAT+AGG 0.375008 4_4:-58374062 None:intergenic
AGATTCCAATCTTCTTTACT+AGG 0.376208 4_4:-58375728 None:intergenic
ATGAGCTCCATCAACAAATA+AGG 0.381553 4_4:+58379134 Msa0690530:exon
GCAAATAAATGTTGGATCCT+TGG 0.384897 4_4:-58377768 None:intergenic
GCAATGCTAACCAAGTTTCC+AGG 0.385429 4_4:-58374374 None:intergenic
TGCTTACCACTACTATTGCT+TGG 0.388809 4_4:+58375242 Msa0690530:CDS
GGACCTGTTGGTTGGTTTGG+AGG 0.393014 4_4:+58378279 Msa0690530:CDS
ATTGGGATTGGATATCTATA+AGG 0.399903 4_4:+58374444 Msa0690530:CDS
GAGGAGATTTGGACCAAATT+GGG 0.401584 4_4:+58379730 Msa0690530:three_prime_UTR
GTTGTTGTTTCAAAGTGATA+TGG 0.401605 4_4:-58372978 None:intergenic
ATGCCAGATGAGGTACAAAA+TGG 0.404784 4_4:-58374236 None:intergenic
TGGTCCTCTAGCACGGGTTC+CGG 0.410896 4_4:-58376808 None:intergenic
GTGAGTTTGCCGTTGGCATC+AGG 0.415994 4_4:+58378310 Msa0690530:CDS
GAAATCTTGCCCTGGAAACT+TGG 0.418146 4_4:+58374364 Msa0690530:CDS
CAGGTCAGCATTGGTGGAAC+AGG 0.418978 4_4:+58378329 Msa0690530:CDS
AGTCAAATGAGCACCCAATT+TGG 0.419248 4_4:-58379743 None:intergenic
TGCCCTTTGATTCGCGCATA+TGG 0.422545 4_4:+58374756 Msa0690530:CDS
AGCAAGTTGAAGCAATTGAT+TGG 0.422787 4_4:+58374285 Msa0690530:CDS
CTTCCTAGATGCTACTTCTC+TGG 0.424133 4_4:+58374332 Msa0690530:CDS
TTTCTGTGAAATAGTTGCTC+TGG 0.426610 4_4:-58376756 None:intergenic
TCAATGAATGGTTGTAAAGA+AGG 0.426979 4_4:+58374086 Msa0690530:CDS
TTTCTACTTCATGATTCCTC+AGG 0.428813 4_4:+58374836 Msa0690530:CDS
GCTTACCACTACTATTGCTT+GGG 0.431278 4_4:+58375243 Msa0690530:CDS
ATGCCATGCTCCGTATCAAT+TGG 0.432507 4_4:-58379675 None:intergenic
TGTTCAGAGACCTATTTGTA+AGG 0.433073 4_4:+58374052 Msa0690530:intron
GGAAGGAAGCAACCCATACT+TGG 0.437293 4_4:+58378776 Msa0690530:CDS
TATAGATATCCAATCCCAAT+AGG 0.437928 4_4:-58374441 None:intergenic
GTAAGTCAAGTTCAATTTGA+CGG 0.442874 4_4:-58376845 None:intergenic
CCATATCACTAGTGAAGCTT+TGG 0.446524 4_4:+58376785 Msa0690530:CDS
GTTGAGTTTAATGAGCTTGA+AGG 0.447276 4_4:+58375211 Msa0690530:CDS
GGATGCTACCTTTCAATGAA+TGG 0.448779 4_4:+58374074 Msa0690530:CDS
AAAACTTGTGCCTCTTCTGT+TGG 0.455039 4_4:-58377967 None:intergenic
CTTGGGATAATGATCTTTGT+TGG 0.458807 4_4:+58375260 Msa0690530:CDS
GCTTTGATATATGCTGGAAC+TGG 0.459668 4_4:+58378747 Msa0690530:CDS
AAGCCACAAACTGCAGGACT+TGG 0.460419 4_4:-58377943 None:intergenic
TGTTTCAAAGTGATATGGTT+TGG 0.460796 4_4:-58372973 None:intergenic
TCTTTGTTGGTCGTGGGAAA+AGG 0.461435 4_4:+58375273 Msa0690530:CDS
GAGAGTTGAGGTTCCTATTG+AGG 0.466956 4_4:+58374262 Msa0690530:CDS
AAAGTTCAAGAGAACCAGTT+AGG 0.471129 4_4:+58374120 Msa0690530:CDS
AATGTTGGAGGAGCTTGCTT+AGG 0.475322 4_4:-58375683 None:intergenic
ACAAACTTTATCAACACAAA+TGG 0.476125 4_4:+58373158 Msa0690530:CDS
GCCATTGCAGCTGATGCTAC+TGG 0.478778 4_4:-58374167 None:intergenic
TGGCATCAGGTCAGCATTGG+TGG 0.478970 4_4:+58378323 Msa0690530:CDS
AGAATACAAACTAATTAAAT+GGG 0.480923 4_4:+58372946 Msa0690530:five_prime_UTR
CCTCCTCCAAACCAACCAAC+AGG 0.481639 4_4:-58378282 None:intergenic
CCTCCATATGCGCGAATCAA+AGG 0.481748 4_4:-58374759 None:intergenic
CCTGTTGGTTGGTTTGGAGG+AGG 0.487475 4_4:+58378282 Msa0690530:CDS
ACATTCCTAGTAAAGAAGAT+TGG 0.489547 4_4:+58375723 Msa0690530:CDS
CTAGGTGCTTTGATATATGC+TGG 0.491160 4_4:+58378741 Msa0690530:CDS
CGTTGGCATCAGGTCAGCAT+TGG 0.491560 4_4:+58378320 Msa0690530:CDS
GTAAACTCAATGTCGTCCTT+CGG 0.493229 4_4:-58376980 None:intergenic
ATGTTGTTGTCGTTGTCTCT+TGG 0.494505 4_4:-58373207 None:intergenic
TGGCTGCTTAATATCAATGT+TGG 0.498602 4_4:-58375698 None:intergenic
TTAATTGAGCAAATAAATGT+TGG 0.499910 4_4:-58377776 None:intergenic
GTTAAGAAACGAAGAGGATG+AGG 0.505866 4_4:+58377806 Msa0690530:CDS
TTGGTTAGCATTGCTGGTGT+TGG 0.507263 4_4:+58374383 Msa0690530:CDS
TCAAAACGATTGTAGGTTGA+AGG 0.507970 4_4:+58376075 Msa0690530:intron
ATTTGTGTTGATAAAGTTTG+TGG 0.509513 4_4:-58373156 None:intergenic
CTCCATATGCGCGAATCAAA+GGG 0.510017 4_4:-58374758 None:intergenic
TGCCATGAGTTTATGTATGA+AGG 0.513555 4_4:-58373108 None:intergenic
ATAAAATTGCAATTATGGAG+AGG 0.516343 4_4:+58379707 Msa0690530:three_prime_UTR
GCTAGAACTCAAAACATCTC+AGG 0.519609 4_4:+58378809 Msa0690530:CDS
TTGCCAGAGAAGTAGCATCT+AGG 0.520561 4_4:-58374335 None:intergenic
AAGGAAGAACATGAGGGAGA+AGG 0.521471 4_4:-58373089 None:intergenic
CTGCTTAATATCAATGTTGG+AGG 0.521541 4_4:-58375695 None:intergenic
ATATGCTGGAACTGGAATAG+TGG 0.522449 4_4:+58378755 Msa0690530:CDS
ACCAGTAGCATCAGCTGCAA+TGG 0.522993 4_4:+58374166 Msa0690530:CDS
CTAGTGATGGTCCTCTAGCA+CGG 0.525024 4_4:-58376815 None:intergenic
TTTGTGTTGATAAAGTTTGT+GGG 0.525817 4_4:-58373155 None:intergenic
TTCAAAGTGATATGGTTTGG+TGG 0.528437 4_4:-58372970 None:intergenic
TCAAAGTGATATGGTTTGGT+GGG 0.529430 4_4:-58372969 None:intergenic
TTCGCAGGCAGTCTGCGAAA+AGG 0.530662 4_4:+58377710 Msa0690530:intron
TGTATGCTGGACCTGTTGGT+TGG 0.531912 4_4:+58378271 Msa0690530:CDS
TTCCTTCATACATAAACTCA+TGG 0.535311 4_4:+58373106 Msa0690530:exon
ATAATGATCTTTGTTGGTCG+TGG 0.536372 4_4:+58375266 Msa0690530:CDS
ATTCCAATTGATACGGAGCA+TGG 0.537685 4_4:+58379672 Msa0690530:three_prime_UTR
TAATGATCTTTGTTGGTCGT+GGG 0.538149 4_4:+58375267 Msa0690530:CDS
GTTGGAAAGCCACAAACTGC+AGG 0.539573 4_4:-58377949 None:intergenic
CTTTACAACCATTCATTGAA+AGG 0.540015 4_4:-58374082 None:intergenic
TATTTGCTCAATTAACTGGA+AGG 0.540497 4_4:+58377784 Msa0690530:CDS
AAATGGCTGTGACTGCGAAA+AGG 0.540950 4_4:-58374417 None:intergenic
GAGTGTTATTCCAATTGATA+CGG 0.541124 4_4:+58379665 Msa0690530:three_prime_UTR
GTTCAGAGACCTATTTGTAA+GGG 0.543319 4_4:+58374053 Msa0690530:intron
CCTTCAGCCACCTAATGCAC+CGG 0.546354 4_4:+58376119 Msa0690530:CDS
TAATGTTTCATCAGAGTGGA+TGG 0.547863 4_4:+58374803 Msa0690530:CDS
TGTGGGCCACTTGTTTGTAG+TGG 0.550605 4_4:-58373138 None:intergenic
TTGGCCGGAACCCGTGCTAG+AGG 0.556180 4_4:+58376804 Msa0690530:CDS
TAAAATTGCAATTATGGAGA+GGG 0.557454 4_4:+58379708 Msa0690530:three_prime_UTR
CATAACATACATGTTGGCGG+TGG 0.557889 4_4:-58373259 None:intergenic
GCTCATCCCACTCCAAGTAT+GGG 0.558587 4_4:-58378788 None:intergenic
TTGAACTTGACTTACTTACC+AGG 0.562261 4_4:+58376853 Msa0690530:CDS
GGCGAGAGTGAGTTTGCCGT+TGG 0.562594 4_4:+58378303 Msa0690530:CDS
AATTGCAATTATGGAGAGGG+AGG 0.563266 4_4:+58379711 Msa0690530:three_prime_UTR
ATCACTAGTGAAGCTTTGGC+CGG 0.564206 4_4:+58376789 Msa0690530:CDS
TTTGATCGAGGGATGTATGC+TGG 0.570243 4_4:+58378258 Msa0690530:CDS
AGAGGATTGATATTTACAGT+AGG 0.570825 4_4:-58375939 None:intergenic
TTGCATAACATACATGTTGG+CGG 0.573535 4_4:-58373262 None:intergenic
GTTCAGAAGTGTTTGATCGA+GGG 0.574223 4_4:+58378247 Msa0690530:intron
TAGTGATGGTCCTCTAGCAC+GGG 0.574761 4_4:-58376814 None:intergenic
TTGTGGCTTTCCAACAGAAG+AGG 0.579808 4_4:+58377957 Msa0690530:CDS
TGTTTCTTGAAGTGCCGCGA+TGG 0.581100 4_4:-58375296 None:intergenic
AGCCACAAACTGCAGGACTT+GGG 0.581443 4_4:-58377942 None:intergenic
ACTGTGTTTCCGATAAATGC+CGG 0.585235 4_4:-58376138 None:intergenic
AAGCATACGAAGAAAATTGG+AGG 0.588895 4_4:+58377015 Msa0690530:CDS
TCTTGGAAACATGAGGTACA+AGG 0.589561 4_4:-58373190 None:intergenic
ATGTATGAAGGAAGAACATG+AGG 0.590266 4_4:-58373096 None:intergenic
GCTGGAACTGGAATAGTGGA+AGG 0.595266 4_4:+58378759 Msa0690530:CDS
CAACAGCCACTACAAACAAG+TGG 0.598359 4_4:+58373132 Msa0690530:CDS
AACGTGGTTAGCTTGTCTAA+AGG 0.599085 4_4:+58375962 Msa0690530:CDS
GGGATGTATGCTGGACCTGT+TGG 0.600180 4_4:+58378267 Msa0690530:CDS
CAATGCTAACCAAGTTTCCA+GGG 0.601314 4_4:-58374373 None:intergenic
CCTTTGATTCGCGCATATGG+AGG 0.602449 4_4:+58374759 Msa0690530:CDS
AAACGATTGTAGGTTGAAGG+TGG 0.602926 4_4:+58376078 Msa0690530:intron
GAAGCAACCCATACTTGGAG+TGG 0.603898 4_4:+58378781 Msa0690530:CDS
TGTTCAGAAGTGTTTGATCG+AGG 0.604089 4_4:+58378246 Msa0690530:intron
ATAAATGCCGGTGCATTAGG+TGG 0.604297 4_4:-58376126 None:intergenic
AGTAGCATCTAGGAAGCAGA+AGG 0.604523 4_4:-58374325 None:intergenic
GAGTTTAATGAGCTTGAAGG+AGG 0.605355 4_4:+58375214 Msa0690530:CDS
TGTAGTTACCTTGGTAAGTG+AGG 0.606511 4_4:-58375792 None:intergenic
CGTTGTCTCTTGGAAACATG+AGG 0.612604 4_4:-58373197 None:intergenic
AAGGAACAGAAATCTTGCCC+TGG 0.617216 4_4:+58374356 Msa0690530:CDS
GGGATTGGATATCTATAAGG+AGG 0.620357 4_4:+58374447 Msa0690530:CDS
AGCATCTAGGAAGCAGAAGG+TGG 0.620967 4_4:-58374322 None:intergenic
AAGCAACCCATACTTGGAGT+GGG 0.621209 4_4:+58378782 Msa0690530:CDS
CCGGTGCATTAGGTGGCTGA+AGG 0.623228 4_4:-58376119 None:intergenic
AAGCTAATGTTTCATCAGAG+TGG 0.624786 4_4:+58374799 Msa0690530:CDS
CAATGCTGACCTGATGCCAA+CGG 0.626025 4_4:-58378319 None:intergenic
AACTCTCACTATGCCAGATG+AGG 0.629562 4_4:-58374246 None:intergenic
AAATGATTCCTCACTTACCA+AGG 0.633006 4_4:+58375784 Msa0690530:CDS
AAACTCAGGTTGTTCTAGCG+CGG 0.633096 4_4:+58375901 Msa0690530:intron
TTGCTTAGGAAACTTTACAA+TGG 0.633615 4_4:-58375669 None:intergenic
TGACGGTCTAGTGCTAGTGA+TGG 0.637405 4_4:-58376828 None:intergenic
ATAGAAGTTGTGTAAGCACA+AGG 0.643176 4_4:-58379623 None:intergenic
TGGAAGGTTAAGAAACGAAG+AGG 0.647415 4_4:+58377800 Msa0690530:CDS
ATCTGGCATAGTGAGAGTTG+AGG 0.648266 4_4:+58374250 Msa0690530:CDS
TAGATGCTACTTCTCTGGCA+AGG 0.649242 4_4:+58374337 Msa0690530:CDS
AAATGATTAGAAAACTGCCA+AGG 0.653684 4_4:+58377751 Msa0690530:CDS
TGTATGAAGGAAGAACATGA+GGG 0.661288 4_4:-58373095 None:intergenic
ATTATCCCAAGCAATAGTAG+TGG 0.661694 4_4:-58375248 None:intergenic
GTCGTGGGAAAAGGCCATCG+CGG 0.682263 4_4:+58375282 Msa0690530:CDS
GTGAGAAAGAAAGACAGCGG+TGG 0.694930 4_4:-58373006 None:intergenic
ATTGCAGCTGATGCTACTGG+TGG 0.696479 4_4:-58374164 None:intergenic
TAAATATCAATCCTCTAACG+TGG 0.724878 4_4:+58375946 Msa0690530:CDS
AAAGTGAGAAAGAAAGACAG+CGG 0.740670 4_4:-58373009 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTATGTTTTATAAATTT+TGG + chr4_4:58376575-58376594 Msa0690530:intron 10.0%
!! TCATAATATAATTTCAAAAA+AGG - chr4_4:58376622-58376641 None:intergenic 10.0%
!!! TTATTTTTTTTCTTTCTTTT+TGG + chr4_4:58376948-58376967 Msa0690530:intron 10.0%
!! TTACATTCTAATAAATTAAA+AGG + chr4_4:58379490-58379509 Msa0690530:intron 10.0%
!! TATCAAATAAAAAACTATAA+GGG - chr4_4:58379813-58379832 None:intergenic 10.0%
!! TTATCAAATAAAAAACTATA+AGG - chr4_4:58379814-58379833 None:intergenic 10.0%
!! AAGAATACAAACTAATTAAA+TGG + chr4_4:58372945-58372964 Msa0690530:five_prime_UTR 15.0%
!! AGAATACAAACTAATTAAAT+GGG + chr4_4:58372946-58372965 Msa0690530:five_prime_UTR 15.0%
!!! TTTAATTAATTTGATACTAG+AGG + chr4_4:58373505-58373524 Msa0690530:intron 15.0%
!! TAAACTATATATAGAATTTG+TGG - chr4_4:58373641-58373660 None:intergenic 15.0%
!! TGTAATTGAAATAAGTTATT+TGG + chr4_4:58373712-58373731 Msa0690530:intron 15.0%
!!! TCAAGTTTTCAAAAAATATT+TGG + chr4_4:58373979-58373998 Msa0690530:intron 15.0%
!!! ATGAATTTGTTAACTATATT+TGG + chr4_4:58374510-58374529 Msa0690530:intron 15.0%
!!! TTGTAATTTTAATACATTCA+AGG + chr4_4:58375088-58375107 Msa0690530:intron 15.0%
!! ACTTATATGATAAATGTTTA+TGG + chr4_4:58375558-58375577 Msa0690530:intron 15.0%
!! AAATAGTATGTAATAAGAAT+AGG - chr4_4:58376474-58376493 None:intergenic 15.0%
!! CAAGTTCATAAAAATTAAAA+TGG - chr4_4:58376728-58376747 None:intergenic 15.0%
!!! ATTTTTATACTTTTCATTGT+TGG + chr4_4:58377045-58377064 Msa0690530:intron 15.0%
!! AATAAAAAACATATATGCTT+AGG - chr4_4:58378083-58378102 None:intergenic 15.0%
!!! TATTTTAGAAATTCAAAATG+TGG + chr4_4:58378099-58378118 Msa0690530:intron 15.0%
!!! AATCTTCAATTTTTTTTTAC+CGG + chr4_4:58378670-58378689 Msa0690530:intron 15.0%
!!! TTTATTTTGTTTCATTTATG+TGG + chr4_4:58379205-58379224 Msa0690530:intron 15.0%
!! AATATTTATGAATGTATCAA+TGG + chr4_4:58379302-58379321 Msa0690530:intron 15.0%
!! ATCAAATAAAAAACTATAAG+GGG - chr4_4:58379812-58379831 None:intergenic 15.0%
!! ACATATAAATTGGTTACTAA+TGG - chr4_4:58373322-58373341 None:intergenic 20.0%
!!! AACATTTTTTTGATACCAAA+GGG - chr4_4:58373468-58373487 None:intergenic 20.0%
!!! TAACATTTTTTTGATACCAA+AGG - chr4_4:58373469-58373488 None:intergenic 20.0%
!! TATATGTGTTGAAATATCAA+TGG - chr4_4:58373846-58373865 None:intergenic 20.0%
!!! TTTTTTGAAAACTTGATATC+CGG - chr4_4:58373975-58373994 None:intergenic 20.0%
!!! CTAATAGTCTATTCAAATTT+TGG + chr4_4:58374017-58374036 Msa0690530:intron 20.0%
!! AACTAACTTCATAAATTTCA+AGG - chr4_4:58374488-58374507 None:intergenic 20.0%
!!! TTGTGAACTATCTATATTTT+GGG - chr4_4:58374577-58374596 None:intergenic 20.0%
!!! TTTGTGAACTATCTATATTT+TGG - chr4_4:58374578-58374597 None:intergenic 20.0%
!! ATTAGAAAATAAGTCATGTT+TGG + chr4_4:58374622-58374641 Msa0690530:intron 20.0%
!!! GTCTTTTGTTACTAATTTTA+TGG - chr4_4:58375052-58375071 None:intergenic 20.0%
!!! TAGATTTTCTTTAGATTATC+AGG + chr4_4:58375590-58375609 Msa0690530:intron 20.0%
!! ATTTGATGGAGAAAAAAAAA+AGG - chr4_4:58376004-58376023 None:intergenic 20.0%
!! GTGTTATCTTAAATAAAATG+CGG + chr4_4:58376030-58376049 Msa0690530:intron 20.0%
!! ATATCTTAAAAGTCATCATA+AGG + chr4_4:58376641-58376660 Msa0690530:intron 20.0%
!! TCAGAATATAGTTTCAAAAA+AGG - chr4_4:58376674-58376693 None:intergenic 20.0%
!!! GTACAATGATATTTGTTTTT+AGG + chr4_4:58377192-58377211 Msa0690530:intron 20.0%
!! AATTGATGTCTTCAAAAAAA+GGG - chr4_4:58377237-58377256 None:intergenic 20.0%
!! TAATTGATGTCTTCAAAAAA+AGG - chr4_4:58377238-58377257 None:intergenic 20.0%
!! GAAATTGTGAATTTAGAAAT+GGG - chr4_4:58377302-58377321 None:intergenic 20.0%
!!! GTTTTCCTTATTTACTATTT+TGG - chr4_4:58377452-58377471 None:intergenic 20.0%
!!! AATTTTTAGAATTAAGCTGT+TGG + chr4_4:58377514-58377533 Msa0690530:intron 20.0%
!!! AGTTTTCTAATCATTTTCTT+TGG - chr4_4:58377747-58377766 None:intergenic 20.0%
!! TTAATTGAGCAAATAAATGT+TGG - chr4_4:58377779-58377798 None:intergenic 20.0%
!! TAAATGACAACTTAGTTATA+TGG - chr4_4:58377893-58377912 None:intergenic 20.0%
!!! TTTTGTCTATGTTCAAAAAT+GGG - chr4_4:58378176-58378195 None:intergenic 20.0%
!!! TTTTTGTCTATGTTCAAAAA+TGG - chr4_4:58378177-58378196 None:intergenic 20.0%
!! ATTGTCCTTACTATAAAATA+CGG + chr4_4:58378223-58378242 Msa0690530:intron 20.0%
!!! CGATAATATTTTATACTACT+TGG - chr4_4:58378462-58378481 None:intergenic 20.0%
!! AAAATATTATCGTATCTACT+AGG + chr4_4:58378470-58378489 Msa0690530:intron 20.0%
!!! TTAATTGAGATCCTATTTTT+TGG + chr4_4:58378513-58378532 Msa0690530:intron 20.0%
!!! AATTGGTTGATTTATAATAG+CGG + chr4_4:58378547-58378566 Msa0690530:intron 20.0%
!!! TACATGTACTTTTTTTTTTG+CGG - chr4_4:58378931-58378950 None:intergenic 20.0%
!!! AGTTCAAATTTGATAATACA+TGG - chr4_4:58379516-58379535 None:intergenic 20.0%
!!! TTTCTTTGCTTTAGATATTA+TGG + chr4_4:58379597-58379616 Msa0690530:intron 20.0%
!! ATATAATACAACATGTACTA+TGG - chr4_4:58379781-58379800 None:intergenic 20.0%
!! TTTGTGTTGATAAAGTTTGT+GGG - chr4_4:58373158-58373177 None:intergenic 25.0%
!! ATTTGTGTTGATAAAGTTTG+TGG - chr4_4:58373159-58373178 None:intergenic 25.0%
! ACAAACTTTATCAACACAAA+TGG + chr4_4:58373158-58373177 Msa0690530:CDS 25.0%
!! ACTAATGGATAACAAAAAGA+TGG - chr4_4:58373307-58373326 None:intergenic 25.0%
! TTGCATTGTTATGTGAATTA+AGG + chr4_4:58373441-58373460 Msa0690530:intron 25.0%
! ATTTACGAAGAGTTTATTCA+TGG + chr4_4:58373573-58373592 Msa0690530:intron 25.0%
!!! TCCATATCGACTTATAATTT+GGG + chr4_4:58373748-58373767 Msa0690530:intron 25.0%
!!! CATTTAACTGTCATTTTAGA+TGG + chr4_4:58373784-58373803 Msa0690530:intron 25.0%
! TAATAATCAAAAGCTTGAGT+CGG + chr4_4:58373941-58373960 Msa0690530:intron 25.0%
!! AAAGCATTAACAGTTTGATT+CGG - chr4_4:58374552-58374571 None:intergenic 25.0%
! AAAATATCAAATAGTAGCTG+TGG - chr4_4:58374693-58374712 None:intergenic 25.0%
!! GTTGAAAATTTTCACTTTGA+AGG + chr4_4:58374718-58374737 Msa0690530:intron 25.0%
! GTTCTTTCCAAAAACTAATT+TGG + chr4_4:58374871-58374890 Msa0690530:intron 25.0%
! ACTAAGGAAAGAAACATTTA+GGG - chr4_4:58374956-58374975 None:intergenic 25.0%
! AGTAACAAAAGACATAACTA+AGG + chr4_4:58375059-58375078 Msa0690530:intron 25.0%
! AAATGAGTAAATCATCAGTT+TGG - chr4_4:58375146-58375165 None:intergenic 25.0%
! GATTTACTCATTTATAGCAT+TGG + chr4_4:58375153-58375172 Msa0690530:intron 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr4_4:58375436-58375455 None:intergenic 25.0%
!!! ATCTCATGCTTTTTCTTTAT+TGG + chr4_4:58375814-58375833 Msa0690530:intron 25.0%
!! TATATGTTTTCTTTTGAACC+AGG + chr4_4:58376435-58376454 Msa0690530:intron 25.0%
!! ATATGTTTTCTTTTGAACCA+GGG + chr4_4:58376436-58376455 Msa0690530:intron 25.0%
! ATCATGTGAAATTCATTATG+TGG - chr4_4:58376536-58376555 None:intergenic 25.0%
! AATAAAAATCACAAGCATCA+GGG - chr4_4:58376933-58376952 None:intergenic 25.0%
! AAATAAAAATCACAAGCATC+AGG - chr4_4:58376934-58376953 None:intergenic 25.0%
! AACAAAATCTAACGTACATT+AGG - chr4_4:58377094-58377113 None:intergenic 25.0%
! GGAAATTGTGAATTTAGAAA+TGG - chr4_4:58377303-58377322 None:intergenic 25.0%
! CAATATCATCGAAATGTATA+GGG - chr4_4:58377360-58377379 None:intergenic 25.0%
! TCAATATCATCGAAATGTAT+AGG - chr4_4:58377361-58377380 None:intergenic 25.0%
! TTGAAATTGAAATGCTTATG+TGG + chr4_4:58377377-58377396 Msa0690530:intron 25.0%
! TAGTAAATAAGGAAAACTAG+AGG + chr4_4:58377455-58377474 Msa0690530:intron 25.0%
! AAATTCATCACATAGAAACA+AGG - chr4_4:58377499-58377518 None:intergenic 25.0%
! CATTTATTTGCTCAATTAAC+TGG + chr4_4:58377780-58377799 Msa0690530:CDS 25.0%
!! TTTTTACTTGAACTGTAACA+TGG - chr4_4:58377835-58377854 None:intergenic 25.0%
! AGAACAAGTAGGAAAATATT+TGG - chr4_4:58378045-58378064 None:intergenic 25.0%
! CTTGTAATAAAGTCAAAGTT+AGG + chr4_4:58378127-58378146 Msa0690530:intron 25.0%
! TTAGGTGATATTGATATGTT+TGG + chr4_4:58378145-58378164 Msa0690530:intron 25.0%
!! AACATCTGTTGTTTGAAATA+CGG + chr4_4:58378430-58378449 Msa0690530:intron 25.0%
! AAATAGGATCTCAATTAACT+TGG - chr4_4:58378511-58378530 None:intergenic 25.0%
!!! GAGTATTGAGATACTAATAA+TGG - chr4_4:58378645-58378664 None:intergenic 25.0%
!! ACATTTGCAAGTTTTCATAT+AGG + chr4_4:58378716-58378735 Msa0690530:intron 25.0%
!! ATGTGAATGCATACATATTT+TGG + chr4_4:58378837-58378856 Msa0690530:intron 25.0%
! ACATGTATCTGATTCAAATT+TGG - chr4_4:58378960-58378979 None:intergenic 25.0%
! TATGTATTAATATCTCACAG+CGG - chr4_4:58379364-58379383 None:intergenic 25.0%
!! TAATTTAGAGCTTCTCTAAA+TGG - chr4_4:58379464-58379483 None:intergenic 25.0%
!! CCATAATTGCAATTTTATTG+AGG - chr4_4:58379705-58379724 None:intergenic 25.0%
! CCTCAATAAAATTGCAATTA+TGG + chr4_4:58379702-58379721 Msa0690530:three_prime_UTR 25.0%
! ATAAAATTGCAATTATGGAG+AGG + chr4_4:58379707-58379726 Msa0690530:three_prime_UTR 25.0%
! TAAAATTGCAATTATGGAGA+GGG + chr4_4:58379708-58379727 Msa0690530:three_prime_UTR 25.0%
!! CATTACTTTAAGAACAACTT+TGG - chr4_4:58379895-58379914 None:intergenic 25.0%
TGTTTCAAAGTGATATGGTT+TGG - chr4_4:58372976-58372995 None:intergenic 30.0%
!! GTTGTTGTTTCAAAGTGATA+TGG - chr4_4:58372981-58373000 None:intergenic 30.0%
TTCCTTCATACATAAACTCA+TGG + chr4_4:58373106-58373125 Msa0690530:exon 30.0%
AGTTTGCATAACATACATGT+TGG - chr4_4:58373268-58373287 None:intergenic 30.0%
GTTGCAACACACATATAAAT+TGG - chr4_4:58373332-58373351 None:intergenic 30.0%
!! CTCCATATCGACTTATAATT+TGG + chr4_4:58373747-58373766 Msa0690530:intron 30.0%
TCCCAAATTATAAGTCGATA+TGG - chr4_4:58373752-58373771 None:intergenic 30.0%
!! TATCGACTTATAATTTGGGA+TGG + chr4_4:58373752-58373771 Msa0690530:intron 30.0%
AGCAAATTCACTTTCAAAGT+AGG - chr4_4:58373916-58373935 None:intergenic 30.0%
CTTTACAACCATTCATTGAA+AGG - chr4_4:58374085-58374104 None:intergenic 30.0%
TCAATGAATGGTTGTAAAGA+AGG + chr4_4:58374086-58374105 Msa0690530:CDS 30.0%
TATAGATATCCAATCCCAAT+AGG - chr4_4:58374444-58374463 None:intergenic 30.0%
ATTGGGATTGGATATCTATA+AGG + chr4_4:58374444-58374463 Msa0690530:CDS 30.0%
TCATAAATTTCAAGGAACCA+AGG - chr4_4:58374480-58374499 None:intergenic 30.0%
AAGCATTAACAGTTTGATTC+GGG - chr4_4:58374551-58374570 None:intergenic 30.0%
GAAAATAAGTCATGTTTGGT+TGG + chr4_4:58374626-58374645 Msa0690530:intron 30.0%
!!! CATTAGCTTTTGCATTGAAA+CGG - chr4_4:58374788-58374807 None:intergenic 30.0%
!! TAGTTTTTGGAAAGAACACA+GGG - chr4_4:58374868-58374887 None:intergenic 30.0%
!! TTAGTTTTTGGAAAGAACAC+AGG - chr4_4:58374869-58374888 None:intergenic 30.0%
!!! TGAAGGACCAAATTAGTTTT+TGG - chr4_4:58374881-58374900 None:intergenic 30.0%
CACTAAGGAAAGAAACATTT+AGG - chr4_4:58374957-58374976 None:intergenic 30.0%
! GTGTCTTTTGTTAGTTAGTT+TGG + chr4_4:58374993-58375012 Msa0690530:intron 30.0%
!!! TCAACCTGTCAATTTTTTCT+CGG - chr4_4:58375196-58375215 None:intergenic 30.0%
ACTTTGCAAAGTAAGTGTTA+GGG + chr4_4:58375318-58375337 Msa0690530:intron 30.0%
TCAAAAAAGTCAATCCAAAC+AGG - chr4_4:58375344-58375363 None:intergenic 30.0%
TAAACACATTCAAGACTGTT+TGG + chr4_4:58375379-58375398 Msa0690530:intron 30.0%
AAACACATTCAAGACTGTTT+GGG + chr4_4:58375380-58375399 Msa0690530:intron 30.0%
TTGCTTAGGAAACTTTACAA+TGG - chr4_4:58375672-58375691 None:intergenic 30.0%
CTTCTTTACTAGGAATGTTA+TGG - chr4_4:58375721-58375740 None:intergenic 30.0%
ACATTCCTAGTAAAGAAGAT+TGG + chr4_4:58375723-58375742 Msa0690530:CDS 30.0%
AGATTCCAATCTTCTTTACT+AGG - chr4_4:58375731-58375750 None:intergenic 30.0%
GAAGAAAATGAGCTTTCAAA+TGG - chr4_4:58375870-58375889 None:intergenic 30.0%
! CTCATTTTCTTCTTCCATAT+TGG + chr4_4:58375878-58375897 Msa0690530:intron 30.0%
AGAGGATTGATATTTACAGT+AGG - chr4_4:58375942-58375961 None:intergenic 30.0%
TAAATATCAATCCTCTAACG+TGG + chr4_4:58375946-58375965 Msa0690530:CDS 30.0%
CTTAAATAAAATGCGGTAGA+AGG + chr4_4:58376037-58376056 Msa0690530:intron 30.0%
GTATACATCAAAACGATTGT+AGG + chr4_4:58376068-58376087 Msa0690530:intron 30.0%
! ACACCCTTATCTTTTTATGT+CGG + chr4_4:58376200-58376219 Msa0690530:intron 30.0%
TACCCGACATAAAAAGATAA+GGG - chr4_4:58376206-58376225 None:intergenic 30.0%
ATACCCGACATAAAAAGATA+AGG - chr4_4:58376207-58376226 None:intergenic 30.0%
! TTATCTTTTTATGTCGGGTA+TGG + chr4_4:58376206-58376225 Msa0690530:intron 30.0%
! TATCTTTTTATGTCGGGTAT+GGG + chr4_4:58376207-58376226 Msa0690530:intron 30.0%
CTCATAGTTTACTGATAAGT+GGG + chr4_4:58376237-58376256 Msa0690530:intron 30.0%
AAGTTGTATTATGTAACCCT+AGG + chr4_4:58376308-58376327 Msa0690530:intron 30.0%
! TTTTCTATTATCCAAGCCTA+GGG - chr4_4:58376327-58376346 None:intergenic 30.0%
! ATTTTCTATTATCCAAGCCT+AGG - chr4_4:58376328-58376347 None:intergenic 30.0%
!! AGAACACTCAAATTTTAGCA+TGG - chr4_4:58376398-58376417 None:intergenic 30.0%
TCTTAAAAGTCATCATAAGG+AGG + chr4_4:58376644-58376663 Msa0690530:intron 30.0%
AGCAACTATTTCACAGAAAA+TGG + chr4_4:58376760-58376779 Msa0690530:CDS 30.0%
GTAAGTCAAGTTCAATTTGA+CGG - chr4_4:58376848-58376867 None:intergenic 30.0%
! AGAAAGCATACGAAGAAAAT+TGG + chr4_4:58377012-58377031 Msa0690530:CDS 30.0%
!!! ATGTTTTTTCCTCAAATCCT+TGG + chr4_4:58377119-58377138 Msa0690530:intron 30.0%
TCCTTGGATACTGATATAAT+AGG + chr4_4:58377135-58377154 Msa0690530:intron 30.0%
TATAATAGGCATGCAATAGA+TGG + chr4_4:58377149-58377168 Msa0690530:intron 30.0%
! TTAGGCTTGAATCACAATTT+TGG + chr4_4:58377210-58377229 Msa0690530:intron 30.0%
! CTTTGTCTCAATCACAATTT+TGG + chr4_4:58377273-58377292 Msa0690530:intron 30.0%
! TCCATCCACAATTTTCAAAA+TGG + chr4_4:58377320-58377339 Msa0690530:intron 30.0%
!! TCCATTTTGAAAATTGTGGA+TGG - chr4_4:58377324-58377343 None:intergenic 30.0%
!! GTCATCCATTTTGAAAATTG+TGG - chr4_4:58377328-58377347 None:intergenic 30.0%
GGATTATACATAATAGCATG+AGG - chr4_4:58377540-58377559 None:intergenic 30.0%
AAATGATTAGAAAACTGCCA+AGG + chr4_4:58377751-58377770 Msa0690530:CDS 30.0%
TATTTGCTCAATTAACTGGA+AGG + chr4_4:58377784-58377803 Msa0690530:CDS 30.0%
AAACAACGATGTATGGAAAA+TGG - chr4_4:58378013-58378032 None:intergenic 30.0%
GTATTAGAAACAACGATGTA+TGG - chr4_4:58378020-58378039 None:intergenic 30.0%
! TTTTCCTACTTGTTCTTGAA+AGG + chr4_4:58378049-58378068 Msa0690530:intron 30.0%
! GAACACCGTATTTTATAGTA+AGG - chr4_4:58378231-58378250 None:intergenic 30.0%
CTTGTTTGTCTCCAAAAAAT+AGG - chr4_4:58378527-58378546 None:intergenic 30.0%
!! TTTTGGAGACAAACAAGAAT+TGG + chr4_4:58378530-58378549 Msa0690530:intron 30.0%
!! AAGTAAACTCTGAAATTTCC+AGG + chr4_4:58378607-58378626 Msa0690530:intron 30.0%
!! TAATGGATTACTGAAATTCC+TGG - chr4_4:58378628-58378647 None:intergenic 30.0%
! CAAGTTTTCATATAGGAACT+AGG + chr4_4:58378723-58378742 Msa0690530:intron 30.0%
GTTCACTAAGTTACTTAAAC+TGG + chr4_4:58379080-58379099 Msa0690530:intron 30.0%
! CTACAAACCTTATTTGTTGA+TGG - chr4_4:58379144-58379163 None:intergenic 30.0%
TATACTTGAATTTCGCATTC+TGG - chr4_4:58379552-58379571 None:intergenic 30.0%
! GAGTGTTATTCCAATTGATA+CGG + chr4_4:58379665-58379684 Msa0690530:three_prime_UTR 30.0%
!! TCAAAGTGATATGGTTTGGT+GGG - chr4_4:58372972-58372991 None:intergenic 35.0%
! TTCAAAGTGATATGGTTTGG+TGG - chr4_4:58372973-58372992 None:intergenic 35.0%
AAAGTGAGAAAGAAAGACAG+CGG - chr4_4:58373012-58373031 None:intergenic 35.0%
TGTATGAAGGAAGAACATGA+GGG - chr4_4:58373098-58373117 None:intergenic 35.0%
ATGTATGAAGGAAGAACATG+AGG - chr4_4:58373099-58373118 None:intergenic 35.0%
TGCCATGAGTTTATGTATGA+AGG - chr4_4:58373111-58373130 None:intergenic 35.0%
TTGCATAACATACATGTTGG+CGG - chr4_4:58373265-58373284 None:intergenic 35.0%
TATGTGAATTAAGGACCCTT+TGG + chr4_4:58373450-58373469 Msa0690530:intron 35.0%
TGATACTAGAGGCTTATTTG+AGG + chr4_4:58373516-58373535 Msa0690530:intron 35.0%
! TCGTAAATAGTCTTACAGAC+AGG - chr4_4:58373561-58373580 None:intergenic 35.0%
! GACTTATAATTTGGGATGGA+GGG + chr4_4:58373756-58373775 Msa0690530:intron 35.0%
!!! ACTGTCATTTTAGATGGCAA+AGG + chr4_4:58373790-58373809 Msa0690530:intron 35.0%
TGTTCAGAGACCTATTTGTA+AGG + chr4_4:58374052-58374071 Msa0690530:intron 35.0%
GTTCAGAGACCTATTTGTAA+GGG + chr4_4:58374053-58374072 Msa0690530:intron 35.0%
AAAGTTCAAGAGAACCAGTT+AGG + chr4_4:58374120-58374139 Msa0690530:CDS 35.0%
! AGCAAGTTGAAGCAATTGAT+TGG + chr4_4:58374285-58374304 Msa0690530:CDS 35.0%
ATCCAATCCCAATAGGAAAA+TGG - chr4_4:58374437-58374456 None:intergenic 35.0%
TATAAGGAGGTAATTCACCT+TGG + chr4_4:58374460-58374479 Msa0690530:intron 35.0%
AAGCTAATGTTTCATCAGAG+TGG + chr4_4:58374799-58374818 Msa0690530:CDS 35.0%
TAATGTTTCATCAGAGTGGA+TGG + chr4_4:58374803-58374822 Msa0690530:CDS 35.0%
TTTCTACTTCATGATTCCTC+AGG + chr4_4:58374836-58374855 Msa0690530:CDS 35.0%
TAACACGTTTGACACATTGA+AGG - chr4_4:58374898-58374917 None:intergenic 35.0%
GTTTCTTTCCTTAGTGAGTT+TGG + chr4_4:58374961-58374980 Msa0690530:intron 35.0%
TTCAAAGACCAAACTCACTA+AGG - chr4_4:58374972-58374991 None:intergenic 35.0%
GTTGAGTTTAATGAGCTTGA+AGG + chr4_4:58375211-58375230 Msa0690530:CDS 35.0%
ATTATCCCAAGCAATAGTAG+TGG - chr4_4:58375251-58375270 None:intergenic 35.0%
CTTGGGATAATGATCTTTGT+TGG + chr4_4:58375260-58375279 Msa0690530:CDS 35.0%
ATAATGATCTTTGTTGGTCG+TGG + chr4_4:58375266-58375285 Msa0690530:CDS 35.0%
TAATGATCTTTGTTGGTCGT+GGG + chr4_4:58375267-58375286 Msa0690530:CDS 35.0%
CACTTTGCAAAGTAAGTGTT+AGG + chr4_4:58375317-58375336 Msa0690530:intron 35.0%
TCTTTAGATTATCAGGACTC+AGG + chr4_4:58375597-58375616 Msa0690530:intron 35.0%
ACTATGCATCTTTGTATTGC+AGG + chr4_4:58375637-58375656 Msa0690530:intron 35.0%
CTGCTTAATATCAATGTTGG+AGG - chr4_4:58375698-58375717 None:intergenic 35.0%
TGGCTGCTTAATATCAATGT+TGG - chr4_4:58375701-58375720 None:intergenic 35.0%
AAATGATTCCTCACTTACCA+AGG + chr4_4:58375784-58375803 Msa0690530:CDS 35.0%
TTCTTCCATATTGGAAACTC+AGG + chr4_4:58375887-58375906 Msa0690530:intron 35.0%
AACAACCTGAGTTTCCAATA+TGG - chr4_4:58375895-58375914 None:intergenic 35.0%
GATAACACTGCTGAATTTGA+TGG - chr4_4:58376018-58376037 None:intergenic 35.0%
! TCAAAACGATTGTAGGTTGA+AGG + chr4_4:58376075-58376094 Msa0690530:intron 35.0%
AATCTTCCTAGTCACATACA+TGG - chr4_4:58376171-58376190 None:intergenic 35.0%
! CACCCTTATCTTTTTATGTC+GGG + chr4_4:58376201-58376220 Msa0690530:intron 35.0%
GCTCATAGTTTACTGATAAG+TGG + chr4_4:58376236-58376255 Msa0690530:intron 35.0%
AGTTTACTGATAAGTGGGTA+TGG + chr4_4:58376242-58376261 Msa0690530:intron 35.0%
CTATATATCCAACTGCAGAA+TGG - chr4_4:58376359-58376378 None:intergenic 35.0%
CATTCTGCAGTTGGATATAT+AGG + chr4_4:58376357-58376376 Msa0690530:intron 35.0%
TTTCTGTGAAATAGTTGCTC+TGG - chr4_4:58376759-58376778 None:intergenic 35.0%
TTGAACTTGACTTACTTACC+AGG + chr4_4:58376853-58376872 Msa0690530:CDS 35.0%
TATCAAAGTCCTAAGCAACA+AGG - chr4_4:58376883-58376902 None:intergenic 35.0%
!!! TTTTTGGTTATACAGTCCGA+AGG + chr4_4:58376964-58376983 Msa0690530:intron 35.0%
AAGCATACGAAGAAAATTGG+AGG + chr4_4:58377015-58377034 Msa0690530:CDS 35.0%
TATCAGTATCCAAGGATTTG+AGG - chr4_4:58377131-58377150 None:intergenic 35.0%
GCCTATTATATCAGTATCCA+AGG - chr4_4:58377139-58377158 None:intergenic 35.0%
ATCATCGAAATGTATAGGGT+GGG - chr4_4:58377356-58377375 None:intergenic 35.0%
TATCATCGAAATGTATAGGG+TGG - chr4_4:58377357-58377376 None:intergenic 35.0%
TCTAGGCAGATTCTTACTTA+GGG + chr4_4:58377425-58377444 Msa0690530:intron 35.0%
AGGGGCCAAAATAGTAAATA+AGG + chr4_4:58377444-58377463 Msa0690530:intron 35.0%
TGTATAATCCAACCCTAGAT+TGG + chr4_4:58377550-58377569 Msa0690530:intron 35.0%
ACTTCCAAAGTTCCAATCTA+GGG - chr4_4:58377565-58377584 None:intergenic 35.0%
TGAAATAGCATGTTGAGTGT+TGG - chr4_4:58377602-58377621 None:intergenic 35.0%
ATGATTGTAAGCAGATGCAA+TGG - chr4_4:58377637-58377656 None:intergenic 35.0%
! CAATCATTTTAGACCTTCCT+AGG + chr4_4:58377650-58377669 Msa0690530:intron 35.0%
ATTCATCATCCTGTTAACCT+AGG - chr4_4:58377670-58377689 None:intergenic 35.0%
GCAAATAAATGTTGGATCCT+TGG - chr4_4:58377771-58377790 None:intergenic 35.0%
!!! AGAGGCACAAGTTTTAATTG+CGG + chr4_4:58377975-58377994 Msa0690530:CDS 35.0%
!!! CAAGTTTTAATTGCGGAAAC+AGG + chr4_4:58377982-58378001 Msa0690530:CDS 35.0%
AAGTCCTTTCAAGAACAAGT+AGG - chr4_4:58378056-58378075 None:intergenic 35.0%
ATGTCACATTCAGTTTGCAT+AGG + chr4_4:58378374-58378393 Msa0690530:intron 35.0%
ATTCGTGGTAAAAAACAGTC+CGG - chr4_4:58378692-58378711 None:intergenic 35.0%
CTTGCAAATGTTATGATTCG+TGG - chr4_4:58378707-58378726 None:intergenic 35.0%
! AGCAATCTTTTTGCAGTGAA+TGG - chr4_4:58378875-58378894 None:intergenic 35.0%
!!! CAATCTACTTTTTGTCTCAG+AGG - chr4_4:58379111-58379130 None:intergenic 35.0%
ATGAGCTCCATCAACAAATA+AGG + chr4_4:58379134-58379153 Msa0690530:exon 35.0%
!! ACATACTAAGTGTTGAGAAG+TGG - chr4_4:58379398-58379417 None:intergenic 35.0%
ATAGAAGTTGTGTAAGCACA+AGG - chr4_4:58379626-58379645 None:intergenic 35.0%
TCTTGGAAACATGAGGTACA+AGG - chr4_4:58373193-58373212 None:intergenic 40.0%
ATGTTGTTGTCGTTGTCTCT+TGG - chr4_4:58373210-58373229 None:intergenic 40.0%
TCATGTTGTGTTCAGTGCAT+TGG - chr4_4:58373362-58373381 None:intergenic 40.0%
! CGACTTATAATTTGGGATGG+AGG + chr4_4:58373755-58373774 Msa0690530:intron 40.0%
AGGTAGCATCCCTTACAAAT+AGG - chr4_4:58374065-58374084 None:intergenic 40.0%
GGATGCTACCTTTCAATGAA+TGG + chr4_4:58374074-58374093 Msa0690530:CDS 40.0%
GGCTATGTACAGTCTCAAAA+TGG + chr4_4:58374187-58374206 Msa0690530:CDS 40.0%
! TCTCCATTTTGTACCTCATC+TGG + chr4_4:58374233-58374252 Msa0690530:CDS 40.0%
ATGCCAGATGAGGTACAAAA+TGG - chr4_4:58374239-58374258 None:intergenic 40.0%
CAATGCTAACCAAGTTTCCA+GGG - chr4_4:58374376-58374395 None:intergenic 40.0%
!! AGTCACAGCCATTTTCCTAT+TGG + chr4_4:58374426-58374445 Msa0690530:CDS 40.0%
!! GTCACAGCCATTTTCCTATT+GGG + chr4_4:58374427-58374446 Msa0690530:CDS 40.0%
!! AGCCATTTTCCTATTGGGAT+TGG + chr4_4:58374432-58374451 Msa0690530:CDS 40.0%
GGGATTGGATATCTATAAGG+AGG + chr4_4:58374447-58374466 Msa0690530:CDS 40.0%
AATAGTAGCTGTGGCATAGA+AGG - chr4_4:58374684-58374703 None:intergenic 40.0%
TGACACTACCTCACACATTT+AGG + chr4_4:58375118-58375137 Msa0690530:intron 40.0%
GACACTACCTCACACATTTA+GGG + chr4_4:58375119-58375138 Msa0690530:intron 40.0%
CTAGCCGAGAAAAAATTGAC+AGG + chr4_4:58375189-58375208 Msa0690530:intron 40.0%
GAGTTTAATGAGCTTGAAGG+AGG + chr4_4:58375214-58375233 Msa0690530:CDS 40.0%
TGCTTACCACTACTATTGCT+TGG + chr4_4:58375242-58375261 Msa0690530:CDS 40.0%
GCTTACCACTACTATTGCTT+GGG + chr4_4:58375243-58375262 Msa0690530:CDS 40.0%
ACTGTTTGGGAGAGCTTAAT+TGG + chr4_4:58375393-58375412 Msa0690530:intron 40.0%
! CTTATTTCCACAAGCTCTGA+AGG + chr4_4:58375450-58375469 Msa0690530:intron 40.0%
TTAGATTATCAGGACTCAGG+AGG + chr4_4:58375600-58375619 Msa0690530:intron 40.0%
TGTAGTTACCTTGGTAAGTG+AGG - chr4_4:58375795-58375814 None:intergenic 40.0%
AGCATGAGATGTAGTTACCT+TGG - chr4_4:58375804-58375823 None:intergenic 40.0%
!! AACGTGGTTAGCTTGTCTAA+AGG + chr4_4:58375962-58375981 Msa0690530:CDS 40.0%
!! GTTAGCTTGTCTAAAGGTAC+TGG + chr4_4:58375968-58375987 Msa0690530:intron 40.0%
! AAACGATTGTAGGTTGAAGG+TGG + chr4_4:58376078-58376097 Msa0690530:intron 40.0%
TAGGTGGCTGAAGGAAAAAT+TGG - chr4_4:58376113-58376132 None:intergenic 40.0%
ACTGTGTTTCCGATAAATGC+CGG - chr4_4:58376141-58376160 None:intergenic 40.0%
AGTATGCCATGTATGTGACT+AGG + chr4_4:58376162-58376181 Msa0690530:intron 40.0%
TGATAAGTGGGTATGGTTCA+GGG + chr4_4:58376249-58376268 Msa0690530:intron 40.0%
GTATTATGTAACCCTAGGCT+TGG + chr4_4:58376313-58376332 Msa0690530:intron 40.0%
ATAGGTTAGAACAACAACCC+TGG - chr4_4:58376456-58376475 None:intergenic 40.0%
CCAAAGCTTCACTAGTGATA+TGG - chr4_4:58376788-58376807 None:intergenic 40.0%
CCATATCACTAGTGAAGCTT+TGG + chr4_4:58376785-58376804 Msa0690530:CDS 40.0%
GTAAACTCAATGTCGTCCTT+CGG - chr4_4:58376983-58377002 None:intergenic 40.0%
ATAGGCATGCAATAGATGGA+AGG + chr4_4:58377153-58377172 Msa0690530:intron 40.0%
GTCTAGGCAGATTCTTACTT+AGG + chr4_4:58377424-58377443 Msa0690530:intron 40.0%
CTAGGCAGATTCTTACTTAG+GGG + chr4_4:58377426-58377445 Msa0690530:intron 40.0%
GACTTCCAAAGTTCCAATCT+AGG - chr4_4:58377566-58377585 None:intergenic 40.0%
TTAGACCTTCCTAGGTTAAC+AGG + chr4_4:58377658-58377677 Msa0690530:intron 40.0%
ATCATCCTGTTAACCTAGGA+AGG - chr4_4:58377666-58377685 None:intergenic 40.0%
GAAAACAAGCGCGTAGTTAA+AGG - chr4_4:58377693-58377712 None:intergenic 40.0%
TGGAAGGTTAAGAAACGAAG+AGG + chr4_4:58377800-58377819 Msa0690530:CDS 40.0%
GTTAAGAAACGAAGAGGATG+AGG + chr4_4:58377806-58377825 Msa0690530:CDS 40.0%
AAAACTTGTGCCTCTTCTGT+TGG - chr4_4:58377970-58377989 None:intergenic 40.0%
! GTTTTCACTTCAACTCGCTT+TGG + chr4_4:58378197-58378216 Msa0690530:intron 40.0%
!! TGTTCAGAAGTGTTTGATCG+AGG + chr4_4:58378246-58378265 Msa0690530:intron 40.0%
!! GTTCAGAAGTGTTTGATCGA+GGG + chr4_4:58378247-58378266 Msa0690530:intron 40.0%
CTAGGTGCTTTGATATATGC+TGG + chr4_4:58378741-58378760 Msa0690530:CDS 40.0%
GCTTTGATATATGCTGGAAC+TGG + chr4_4:58378747-58378766 Msa0690530:CDS 40.0%
ATATGCTGGAACTGGAATAG+TGG + chr4_4:58378755-58378774 Msa0690530:CDS 40.0%
GCTAGAACTCAAAACATCTC+AGG + chr4_4:58378809-58378828 Msa0690530:CDS 40.0%
CCGCTATTTGACAACACTAT+CGG - chr4_4:58379029-58379048 None:intergenic 40.0%
CCGATAGTGTTGTCAAATAG+CGG + chr4_4:58379026-58379045 Msa0690530:intron 40.0%
ATTCCAATTGATACGGAGCA+TGG + chr4_4:58379672-58379691 Msa0690530:three_prime_UTR 40.0%
AATTGCAATTATGGAGAGGG+AGG + chr4_4:58379711-58379730 Msa0690530:three_prime_UTR 40.0%
GAGGAGATTTGGACCAAATT+GGG + chr4_4:58379730-58379749 Msa0690530:three_prime_UTR 40.0%
AGTCAAATGAGCACCCAATT+TGG - chr4_4:58379746-58379765 None:intergenic 40.0%
AAGGAAGAACATGAGGGAGA+AGG - chr4_4:58373092-58373111 None:intergenic 45.0%
CAACAGCCACTACAAACAAG+TGG + chr4_4:58373132-58373151 Msa0690530:CDS 45.0%
CGTTGTCTCTTGGAAACATG+AGG - chr4_4:58373200-58373219 None:intergenic 45.0%
CATAACATACATGTTGGCGG+TGG - chr4_4:58373262-58373281 None:intergenic 45.0%
TGTTGTGTTCAGTGCATTGG+TGG - chr4_4:58373359-58373378 None:intergenic 45.0%
AAAAGCTTGAGTCGGTCCTT+GGG + chr4_4:58373949-58373968 Msa0690530:intron 45.0%
AAAACTTGATATCCGGCCCA+AGG - chr4_4:58373968-58373987 None:intergenic 45.0%
AACTCTCACTATGCCAGATG+AGG - chr4_4:58374249-58374268 None:intergenic 45.0%
ATCTGGCATAGTGAGAGTTG+AGG + chr4_4:58374250-58374269 Msa0690530:CDS 45.0%
GAGAGTTGAGGTTCCTATTG+AGG + chr4_4:58374262-58374281 Msa0690530:CDS 45.0%
! GCTTCAACTTGCTCCTCAAT+AGG - chr4_4:58374278-58374297 None:intergenic 45.0%
AGTAGCATCTAGGAAGCAGA+AGG - chr4_4:58374328-58374347 None:intergenic 45.0%
! CTTCCTAGATGCTACTTCTC+TGG + chr4_4:58374332-58374351 Msa0690530:CDS 45.0%
TTGCCAGAGAAGTAGCATCT+AGG - chr4_4:58374338-58374357 None:intergenic 45.0%
! TAGATGCTACTTCTCTGGCA+AGG + chr4_4:58374337-58374356 Msa0690530:CDS 45.0%
AAGGAACAGAAATCTTGCCC+TGG + chr4_4:58374356-58374375 Msa0690530:CDS 45.0%
GAAATCTTGCCCTGGAAACT+TGG + chr4_4:58374364-58374383 Msa0690530:CDS 45.0%
GCAATGCTAACCAAGTTTCC+AGG - chr4_4:58374377-58374396 None:intergenic 45.0%
GGAAACTTGGTTAGCATTGC+TGG + chr4_4:58374377-58374396 Msa0690530:CDS 45.0%
TTGGTTAGCATTGCTGGTGT+TGG + chr4_4:58374383-58374402 Msa0690530:CDS 45.0%
AAATGGCTGTGACTGCGAAA+AGG - chr4_4:58374420-58374439 None:intergenic 45.0%
CTCCATATGCGCGAATCAAA+GGG - chr4_4:58374761-58374780 None:intergenic 45.0%
! TCATCAGAGTGGATGGCTTT+TGG + chr4_4:58374810-58374829 Msa0690530:CDS 45.0%
! TGTGTGAGGTAGTGTCACTA+TGG - chr4_4:58375115-58375134 None:intergenic 45.0%
GTTTGGTCCCTAAATGTGTG+AGG - chr4_4:58375129-58375148 None:intergenic 45.0%
TCTTTGTTGGTCGTGGGAAA+AGG + chr4_4:58375273-58375292 Msa0690530:CDS 45.0%
AGTAAGTGTTAGGGCCTGTT+TGG + chr4_4:58375327-58375346 Msa0690530:intron 45.0%
AAGCTATCCTTCAGAGCTTG+TGG - chr4_4:58375460-58375479 None:intergenic 45.0%
! AATGTTGGAGGAGCTTGCTT+AGG - chr4_4:58375686-58375705 None:intergenic 45.0%
! AAACTCAGGTTGTTCTAGCG+CGG + chr4_4:58375901-58375920 Msa0690530:intron 45.0%
AGACAAGCTAACCACGTTAG+AGG - chr4_4:58375960-58375979 None:intergenic 45.0%
ATAAATGCCGGTGCATTAGG+TGG - chr4_4:58376129-58376148 None:intergenic 45.0%
! CCTAATGCACCGGCATTTAT+CGG + chr4_4:58376129-58376148 Msa0690530:CDS 45.0%
CTGATAAGTGGGTATGGTTC+AGG + chr4_4:58376248-58376267 Msa0690530:intron 45.0%
GATAAGTGGGTATGGTTCAG+GGG + chr4_4:58376250-58376269 Msa0690530:intron 45.0%
ATAAGTGGGTATGGTTCAGG+GGG + chr4_4:58376251-58376270 Msa0690530:intron 45.0%
TACTGCAACCATTCTGCAGT+TGG + chr4_4:58376348-58376367 Msa0690530:intron 45.0%
! ATCACTAGTGAAGCTTTGGC+CGG + chr4_4:58376789-58376808 Msa0690530:CDS 45.0%
CCTAAGCAACAAGGTAAACC+TGG - chr4_4:58376874-58376893 None:intergenic 45.0%
! CCAGGTTTACCTTGTTGCTT+AGG + chr4_4:58376871-58376890 Msa0690530:intron 45.0%
TCGATGATGTGACACTGTCT+AGG + chr4_4:58377408-58377427 Msa0690530:intron 45.0%
! CCAAAGTTCCAATCTAGGGT+TGG - chr4_4:58377561-58377580 None:intergenic 45.0%
CCAACCCTAGATTGGAACTT+TGG + chr4_4:58377558-58377577 Msa0690530:intron 45.0%
TTGTGGCTTTCCAACAGAAG+AGG + chr4_4:58377957-58377976 Msa0690530:CDS 45.0%
TTTGATCGAGGGATGTATGC+TGG + chr4_4:58378258-58378277 Msa0690530:CDS 45.0%
AAGCAACCCATACTTGGAGT+GGG + chr4_4:58378782-58378801 Msa0690530:CDS 45.0%
GAATTTCGCATTCTGGTGCA+TGG - chr4_4:58379545-58379564 None:intergenic 45.0%
ATGCCATGCTCCGTATCAAT+TGG - chr4_4:58379678-58379697 None:intergenic 45.0%
TTATGGAGAGGGAGGAGATT+TGG + chr4_4:58379719-58379738 Msa0690530:three_prime_UTR 45.0%
GGAGGAGATTTGGACCAAAT+TGG + chr4_4:58379729-58379748 Msa0690530:three_prime_UTR 45.0%
!!! ATTTTATTTTTTTTTCATTT+TGG + chr4_4:58373388-58373407 Msa0690530:intron 5.0%
GTGAGAAAGAAAGACAGCGG+TGG - chr4_4:58373009-58373028 None:intergenic 50.0%
TGTGGGCCACTTGTTTGTAG+TGG - chr4_4:58373141-58373160 None:intergenic 50.0%
! TGTGTTCAGTGCATTGGTGG+TGG - chr4_4:58373356-58373375 None:intergenic 50.0%
CAAAAGCTTGAGTCGGTCCT+TGG + chr4_4:58373948-58373967 Msa0690530:intron 50.0%
CGCGTTTCTATCGTCCTAAC+TGG - chr4_4:58374137-58374156 None:intergenic 50.0%
ATTGCAGCTGATGCTACTGG+TGG - chr4_4:58374167-58374186 None:intergenic 50.0%
ACCAGTAGCATCAGCTGCAA+TGG + chr4_4:58374166-58374185 Msa0690530:CDS 50.0%
AGCATCTAGGAAGCAGAAGG+TGG - chr4_4:58374325-58374344 None:intergenic 50.0%
TAGCTGTGGCATAGAAGGCA+GGG - chr4_4:58374679-58374698 None:intergenic 50.0%
! TGCCCTTTGATTCGCGCATA+TGG + chr4_4:58374756-58374775 Msa0690530:CDS 50.0%
CCTCCATATGCGCGAATCAA+AGG - chr4_4:58374762-58374781 None:intergenic 50.0%
! CCTTTGATTCGCGCATATGG+AGG + chr4_4:58374759-58374778 Msa0690530:CDS 50.0%
!! TGTTTCTTGAAGTGCCGCGA+TGG - chr4_4:58375299-58375318 None:intergenic 50.0%
CCGATAAATGCCGGTGCATT+AGG - chr4_4:58376132-58376151 None:intergenic 50.0%
TTATGTCGGGTATGGGCGTA+TGG + chr4_4:58376214-58376233 Msa0690530:intron 50.0%
TAGTGATGGTCCTCTAGCAC+GGG - chr4_4:58376817-58376836 None:intergenic 50.0%
CTAGTGATGGTCCTCTAGCA+CGG - chr4_4:58376818-58376837 None:intergenic 50.0%
TGACGGTCTAGTGCTAGTGA+TGG - chr4_4:58376831-58376850 None:intergenic 50.0%
!! AACTACGCGCTTGTTTTCGC+AGG + chr4_4:58377695-58377714 Msa0690530:intron 50.0%
AGCCACAAACTGCAGGACTT+GGG - chr4_4:58377945-58377964 None:intergenic 50.0%
AAGCCACAAACTGCAGGACT+TGG - chr4_4:58377946-58377965 None:intergenic 50.0%
GTTGGAAAGCCACAAACTGC+AGG - chr4_4:58377952-58377971 None:intergenic 50.0%
TGTATGCTGGACCTGTTGGT+TGG + chr4_4:58378271-58378290 Msa0690530:CDS 50.0%
CAATGCTGACCTGATGCCAA+CGG - chr4_4:58378322-58378341 None:intergenic 50.0%
! GCTGGAACTGGAATAGTGGA+AGG + chr4_4:58378759-58378778 Msa0690530:CDS 50.0%
GGAAGGAAGCAACCCATACT+TGG + chr4_4:58378776-58378795 Msa0690530:CDS 50.0%
GAAGCAACCCATACTTGGAG+TGG + chr4_4:58378781-58378800 Msa0690530:CDS 50.0%
GCTCATCCCACTCCAAGTAT+GGG - chr4_4:58378791-58378810 None:intergenic 50.0%
AGCTCATCCCACTCCAAGTA+TGG - chr4_4:58378792-58378811 None:intergenic 50.0%
GCCATTGCAGCTGATGCTAC+TGG - chr4_4:58374170-58374189 None:intergenic 55.0%
TAGAAGGCAGGGTGCAGAAG+AGG - chr4_4:58374668-58374687 None:intergenic 55.0%
GTAGCTGTGGCATAGAAGGC+AGG - chr4_4:58374680-58374699 None:intergenic 55.0%
GAACACAGGGTATGCACCTG+AGG - chr4_4:58374855-58374874 None:intergenic 55.0%
CCTTCAGCCACCTAATGCAC+CGG + chr4_4:58376119-58376138 Msa0690530:CDS 55.0%
TTCGCAGGCAGTCTGCGAAA+AGG + chr4_4:58377710-58377729 Msa0690530:intron 55.0%
CACCCAAGTCCTGCAGTTTG+TGG + chr4_4:58377940-58377959 Msa0690530:CDS 55.0%
GGGATGTATGCTGGACCTGT+TGG + chr4_4:58378267-58378286 Msa0690530:CDS 55.0%
! GCTGGACCTGTTGGTTGGTT+TGG + chr4_4:58378276-58378295 Msa0690530:CDS 55.0%
!! GGACCTGTTGGTTGGTTTGG+AGG + chr4_4:58378279-58378298 Msa0690530:CDS 55.0%
CCTCCTCCAAACCAACCAAC+AGG - chr4_4:58378285-58378304 None:intergenic 55.0%
!! CCTGTTGGTTGGTTTGGAGG+AGG + chr4_4:58378282-58378301 Msa0690530:CDS 55.0%
GTGAGTTTGCCGTTGGCATC+AGG + chr4_4:58378310-58378329 Msa0690530:CDS 55.0%
CGTTGGCATCAGGTCAGCAT+TGG + chr4_4:58378320-58378339 Msa0690530:CDS 55.0%
! TGGCATCAGGTCAGCATTGG+TGG + chr4_4:58378323-58378342 Msa0690530:CDS 55.0%
!! CAGGTCAGCATTGGTGGAAC+AGG + chr4_4:58378329-58378348 Msa0690530:CDS 55.0%
GTCGTGGGAAAAGGCCATCG+CGG + chr4_4:58375282-58375301 Msa0690530:CDS 60.0%
CCGGTGCATTAGGTGGCTGA+AGG - chr4_4:58376122-58376141 None:intergenic 60.0%
TGGTCCTCTAGCACGGGTTC+CGG - chr4_4:58376811-58376830 None:intergenic 60.0%
GGCGAGAGTGAGTTTGCCGT+TGG + chr4_4:58378303-58378322 Msa0690530:CDS 60.0%
GCTTGAGTCGGTCCTTGGGC+CGG + chr4_4:58373953-58373972 Msa0690530:intron 65.0%
TTGGCCGGAACCCGTGCTAG+AGG + chr4_4:58376804-58376823 Msa0690530:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58372908 58379936 58372908 ID=Msa0690530;Name=Msa0690530
chr4_4 mRNA 58372908 58379936 58372908 ID=Msa0690530-mRNA-1;Parent=Msa0690530;Name=Msa0690530-mRNA-1;_AED=0.12;_eAED=0.12;_QI=217|1|1|1|0.85|0.73|15|344|567
chr4_4 exon 58372908 58373271 58372908 ID=Msa0690530-mRNA-1:exon:15641;Parent=Msa0690530-mRNA-1
chr4_4 exon 58374059 58374468 58374059 ID=Msa0690530-mRNA-1:exon:15642;Parent=Msa0690530-mRNA-1
chr4_4 exon 58374740 58374857 58374740 ID=Msa0690530-mRNA-1:exon:15643;Parent=Msa0690530-mRNA-1
chr4_4 exon 58375211 58375327 58375211 ID=Msa0690530-mRNA-1:exon:15644;Parent=Msa0690530-mRNA-1
chr4_4 exon 58375659 58375805 58375659 ID=Msa0690530-mRNA-1:exon:15645;Parent=Msa0690530-mRNA-1
chr4_4 exon 58375909 58375983 58375909 ID=Msa0690530-mRNA-1:exon:15646;Parent=Msa0690530-mRNA-1
chr4_4 exon 58376090 58376158 58376090 ID=Msa0690530-mRNA-1:exon:15647;Parent=Msa0690530-mRNA-1
chr4_4 exon 58376756 58376874 58376756 ID=Msa0690530-mRNA-1:exon:15648;Parent=Msa0690530-mRNA-1
chr4_4 exon 58376979 58377036 58376979 ID=Msa0690530-mRNA-1:exon:15649;Parent=Msa0690530-mRNA-1
chr4_4 exon 58377717 58377827 58377717 ID=Msa0690530-mRNA-1:exon:15650;Parent=Msa0690530-mRNA-1
chr4_4 exon 58377919 58378003 58377919 ID=Msa0690530-mRNA-1:exon:15651;Parent=Msa0690530-mRNA-1
chr4_4 exon 58378253 58378350 58378253 ID=Msa0690530-mRNA-1:exon:15652;Parent=Msa0690530-mRNA-1
chr4_4 exon 58378738 58378830 58378738 ID=Msa0690530-mRNA-1:exon:15653;Parent=Msa0690530-mRNA-1
chr4_4 exon 58379081 58379155 58379081 ID=Msa0690530-mRNA-1:exon:15654;Parent=Msa0690530-mRNA-1
chr4_4 exon 58379611 58379936 58379611 ID=Msa0690530-mRNA-1:exon:15655;Parent=Msa0690530-mRNA-1
chr4_4 five_prime_UTR 58372908 58373124 58372908 ID=Msa0690530-mRNA-1:five_prime_utr;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58373125 58373271 58373125 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58374059 58374468 58374059 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58374740 58374857 58374740 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58375211 58375327 58375211 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58375659 58375805 58375659 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58375909 58375983 58375909 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58376090 58376158 58376090 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58376756 58376874 58376756 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58376979 58377036 58376979 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58377717 58377827 58377717 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58377919 58378003 58377919 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58378253 58378350 58378253 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58378738 58378830 58378738 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 CDS 58379081 58379137 58379081 ID=Msa0690530-mRNA-1:cds;Parent=Msa0690530-mRNA-1
chr4_4 three_prime_UTR 58379138 58379155 58379138 ID=Msa0690530-mRNA-1:three_prime_utr;Parent=Msa0690530-mRNA-1
chr4_4 three_prime_UTR 58379611 58379936 58379611 ID=Msa0690530-mRNA-1:three_prime_utr;Parent=Msa0690530-mRNA-1
Gene Sequence

>Msa0690530

ATGGCAACAACAGCCACTACAAACAAGTGGCCCACAAACTTTATCAACACAAATGGCTGCAATATCCTTGTACCTCATGTTTCCAAGAGACAACGACAACAACATTATCATCATCAACAATCTATGTATCTTATCCACCGCCAACATAGACCTATTTGTAAGGGATGCTACCTTTCAATGAATGGTTGTAAAGAAGGAGAAATAAATAAAAGTTCAAGAGAACCAGTTAGGACGATAGAAACGCGAACATTGCCACCAGTAGCATCAGCTGCAATGGCTATGTACAGTCTCAAAATGGCTATTTCAGAGCTAAAAGAAATCTCTCCATTTTGTACCTCATCTGGCATAGTGAGAGTTGAGGTTCCTATTGAGGAGCAAGTTGAAGCAATTGATTGGCTTCATTCACAAAACCACCTTCTGCTTCCTAGATGCTACTTCTCTGGCAAGGAACAGAAATCTTGCCCTGGAAACTTGGTTAGCATTGCTGGTGTTGGTTCTGCTGTTTCCTTTTCGCAGTCACAGCCATTTTCCTATTGGGATTGGATATCTATAAGGAGGTTTCTTTCTGAGAGCTGCCCTTTGATTCGCGCATATGGAGGTATCCGTTTCAATGCAAAAGCTAATGTTTCATCAGAGTGGATGGCTTTTGGTTCTTTCTACTTCATGATTCCTCAGGTTGAGTTTAATGAGCTTGAAGGAGGATCAATGCTTACCACTACTATTGCTTGGGATAATGATCTTTGTTGGTCGTGGGAAAAGGCCATCGCGGCACTTCAAGAAACACTTTGCAAAGTTTCTACTTCCATTGTAAAGTTTCCTAAGCAAGCTCCTCCAACATTGATATTAAGCAGCCATAACATTCCTAGTAAAGAAGATTGGAATCTTGCTGTTAATAGAGCTTTGCAGATGATAGAGCAAAATGATTCCTCACTTACCAAGGTTGTTCTAGCGCGGAGCACTAGAGTAGTGCCTACTGTAAATATCAATCCTCTAACGTGGTTAGCTTGTCTAAAGGTTGAAGGTGGAAATGCTTACCAATTTTTCCTTCAGCCACCTAATGCACCGGCATTTATCGGAAACACACCAGAGCAACTATTTCACAGAAAATGGCTCCATATCACTAGTGAAGCTTTGGCCGGAACCCGTGCTAGAGGACCATCACTAGCACTAGACCGTCAAATTGAACTTGACTTACTTACCAGTCCGAAGGACGACATTGAGTTTACTATAGTAAGAGAAAGCATACGAAGAAAATTGGAGGCAGTCTGCGAAAAGGTTATAATCGAGCCAAAGAAAATGATTAGAAAACTGCCAAGGATCCAACATTTATTTGCTCAATTAACTGGAAGGTTAAGAAACGAAGAGGATGAGTTTGAAATTTTGTCATCACTTCACCCAAGTCCTGCAGTTTGTGGCTTTCCAACAGAAGAGGCACAAGTTTTAATTGCGGAAACAGAAGTGTTTGATCGAGGGATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGGCGAGAGTGAGTTTGCCGTTGGCATCAGGTCAGCATTGGTGGAACAGGAACTAGGTGCTTTGATATATGCTGGAACTGGAATAGTGGAAGGAAGCAACCCATACTTGGAGTGGGATGAGCTAGAACTCAAAACATCTCAGTTCACTAAGTTACTTAAACTGGACTTGCCTCTGAGACAAAAAGTAGATTGTAAATGA

Protein sequence

>Msa0690530

MATTATTNKWPTNFINTNGCNILVPHVSKRQRQQHYHHQQSMYLIHRQHRPICKGCYLSMNGCKEGEINKSSREPVRTIETRTLPPVASAAMAMYSLKMAISELKEISPFCTSSGIVRVEVPIEEQVEAIDWLHSQNHLLLPRCYFSGKEQKSCPGNLVSIAGVGSAVSFSQSQPFSYWDWISIRRFLSESCPLIRAYGGIRFNAKANVSSEWMAFGSFYFMIPQVEFNELEGGSMLTTTIAWDNDLCWSWEKAIAALQETLCKVSTSIVKFPKQAPPTLILSSHNIPSKEDWNLAVNRALQMIEQNDSSLTKVVLARSTRVVPTVNINPLTWLACLKVEGGNAYQFFLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGPSLALDRQIELDLLTSPKDDIEFTIVRESIRRKLEAVCEKVIIEPKKMIRKLPRIQHLFAQLTGRLRNEEDEFEILSSLHPSPAVCGFPTEEAQVLIAETEVFDRGMYAGPVGWFGGGESEFAVGIRSALVEQELGALIYAGTGIVEGSNPYLEWDELELKTSQFTKLLKLDLPLRQKVDCK*