Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057780 | KEH16686.1 | 54.802 | 177 | 51 | 3 | 2 | 149 | 65 | 241 | 3.78e-46 | 169 |
| Msa1057780 | KEH16686.1 | 89.520 | 229 | 23 | 1 | 157 | 385 | 17 | 244 | 4.54e-140 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057780 | A0A072THJ7 | 54.802 | 177 | 51 | 3 | 2 | 149 | 65 | 241 | 1.80e-46 | 169 |
| Msa1057780 | A0A072THJ7 | 89.520 | 229 | 23 | 1 | 157 | 385 | 17 | 244 | 2.17e-140 | 409 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0661650 | Msa1057780 | 0.819878 | 9.213201e-53 | -8.615850e-47 |
| Msa0681250 | Msa1057780 | 0.802575 | 5.255697e-49 | -8.615850e-47 |
| Msa0681270 | Msa1057780 | 0.802866 | 4.578660e-49 | -8.615850e-47 |
| Msa0760130 | Msa1057780 | 0.803604 | 3.220547e-49 | -8.615850e-47 |
| Msa0142220 | Msa1057780 | 0.808129 | 3.604219e-50 | -8.615850e-47 |
| Msa0367870 | Msa1057780 | 0.814830 | 1.261312e-51 | -8.615850e-47 |
| Msa0376350 | Msa1057780 | 0.803106 | 4.083127e-49 | -8.615850e-47 |
| Msa0386090 | Msa1057780 | 0.800738 | 1.252120e-48 | -8.615850e-47 |
| Msa0440400 | Msa1057780 | 0.810693 | 1.015183e-50 | -8.615850e-47 |
| Msa0464680 | Msa1057780 | 0.805321 | 1.412711e-49 | -8.615850e-47 |
| Msa0999290 | Msa1057780 | 0.802779 | 4.772032e-49 | -8.615850e-47 |
| Msa1016320 | Msa1057780 | 0.829035 | 6.447680e-55 | -8.615850e-47 |
| Msa1019150 | Msa1057780 | 0.814027 | 1.898391e-51 | -8.615850e-47 |
| Msa1023570 | Msa1057780 | 0.801614 | 8.285304e-49 | -8.615850e-47 |
| Msa1057780 | Msa1057790 | 0.843365 | 1.465807e-58 | -8.615850e-47 |
| Msa1057780 | Msa1075650 | 0.809328 | 1.997812e-50 | -8.615850e-47 |
| Msa1057780 | Msa1083840 | 0.805211 | 1.489572e-49 | -8.615850e-47 |
| Msa1057780 | Msa1101860 | 0.809098 | 2.238152e-50 | -8.615850e-47 |
| Msa1057780 | Msa1121490 | 0.816026 | 6.836638e-52 | -8.615850e-47 |
| Msa1057780 | Msa1147740 | 0.839637 | 1.406630e-57 | -8.615850e-47 |
| Msa1057780 | Msa1297290 | 0.807531 | 4.830118e-50 | -8.615850e-47 |
| Msa1057780 | Msa1385000 | 0.808866 | 2.509405e-50 | -8.615850e-47 |
| Msa1057780 | Msa1392240 | 0.806784 | 6.954026e-50 | -8.615850e-47 |
| Msa1057780 | Msa1440560 | 0.819667 | 1.029675e-52 | -8.615850e-47 |
| Msa0357340 | Msa1057780 | 0.807530 | 4.831609e-50 | -8.615850e-47 |
| Msa0363790 | Msa1057780 | 0.810435 | 1.154474e-50 | -8.615850e-47 |
| Msa0502340 | Msa1057780 | 0.805149 | 1.534350e-49 | -8.615850e-47 |
| Msa0600700 | Msa1057780 | 0.810951 | 8.928784e-51 | -8.615850e-47 |
| Msa0875290 | Msa1057780 | 0.802952 | 4.394700e-49 | -8.615850e-47 |
| Msa0927310 | Msa1057780 | 0.805094 | 1.575855e-49 | -8.615850e-47 |
| Msa0967870 | Msa1057780 | 0.800350 | 1.502276e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1057780 | MtrunA17_Chr7g0231021 | 89.520 | 229 | 23 | 1 | 157 | 385 | 5 | 232 | 6.31e-144 | 408 |
| Msa1057780 | MtrunA17_Chr7g0231021 | 54.802 | 177 | 51 | 3 | 2 | 149 | 53 | 229 | 3.45e-50 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATATGTCTAGTAATTA+TGG | 0.172131 | 7_2:+40452270 | Msa1057780:three_prime_UTR |
| AGGAAGAAATCTATTAAATT+TGG | 0.182965 | 7_2:+40451933 | Msa1057780:CDS |
| ATTAACATTATTATTTGATT+TGG | 0.212608 | 7_2:-40452015 | None:intergenic |
| TTAACATTATTATTTGATTT+GGG | 0.223719 | 7_2:-40452014 | None:intergenic |
| ATAGGGTTTGTTATAAATTA+AGG | 0.230557 | 7_2:+40451913 | Msa1057780:CDS |
| CGAGTGACATAAAATTTAAT+TGG | 0.241343 | 7_2:+40446373 | Msa1057780:CDS |
| TCAAAACAGTCTTCAAATTC+AGG | 0.241742 | 7_2:-40446336 | None:intergenic |
| AATAATGTTAATTAATAATC+AGG | 0.261138 | 7_2:+40452026 | Msa1057780:exon |
| ACTCGGATTGTTCGATTTGT+AGG | 0.262011 | 7_2:-40446592 | None:intergenic |
| GATCTTTAAAAGTTAGGTAT+AGG | 0.293993 | 7_2:+40451895 | Msa1057780:CDS |
| TCTTGCCCGTCAAGGTTAAA+TGG | 0.310214 | 7_2:+40446270 | Msa1057780:intron |
| TGACGTTGTTGTTGGAATAT+TGG | 0.325438 | 7_2:-40451449 | None:intergenic |
| GGTTACAACATTTGCTTTCT+CGG | 0.335688 | 7_2:-40446571 | None:intergenic |
| CAATGGTGAAATGTAAATTC+TGG | 0.339505 | 7_2:-40452350 | None:intergenic |
| GTCGTCGATCTTTAAAAGTT+AGG | 0.340706 | 7_2:+40451889 | Msa1057780:CDS |
| AGGGTGACATAAAGTTTAAT+TGG | 0.350901 | 7_2:+40451790 | Msa1057780:CDS |
| TAGATTTAAAAGTTGAGTAT+AGG | 0.356832 | 7_2:+40446475 | Msa1057780:CDS |
| AAAATATATATTTGCTAACT+AGG | 0.382322 | 7_2:+40446181 | Msa1057780:CDS |
| AGATTTAAAAGTTGAGTATA+GGG | 0.383243 | 7_2:+40446476 | Msa1057780:CDS |
| AGATTCAGTCTTGGTACGTT+TGG | 0.383413 | 7_2:+40451752 | Msa1057780:CDS |
| ATCTTTAAAAGTTAGGTATA+GGG | 0.395637 | 7_2:+40451896 | Msa1057780:CDS |
| TGCTTATAAATTTGACTAGT+GGG | 0.398577 | 7_2:-40451483 | None:intergenic |
| TTTAAAGATCGACGACAATC+TGG | 0.405655 | 7_2:-40451882 | None:intergenic |
| ATTTGAAAATCCGGTATTAG+AGG | 0.409024 | 7_2:+40446542 | Msa1057780:CDS |
| AATAAAGTGTATGCCAGGTT+TGG | 0.417905 | 7_2:+40452128 | Msa1057780:three_prime_UTR |
| TCGGTGTTTGCCTCTAATAC+CGG | 0.446394 | 7_2:-40446552 | None:intergenic |
| GAATTATCTATTTGAAAATC+CGG | 0.447661 | 7_2:+40446533 | Msa1057780:CDS |
| TTATTATTACTCTCTTTCAA+TGG | 0.454963 | 7_2:-40452367 | None:intergenic |
| CACAATTGATGATAGTGAAA+AGG | 0.479164 | 7_2:+40451407 | Msa1057780:CDS |
| AAAATTTGAAGATTCAGTCT+TGG | 0.484593 | 7_2:+40451743 | Msa1057780:CDS |
| CAATCCGAGTTTAGTACAAC+CGG | 0.487346 | 7_2:+40446605 | Msa1057780:CDS |
| TCATCAATTGTGTTCTCAGC+AGG | 0.498222 | 7_2:-40451396 | None:intergenic |
| AAATATATATTTGCTAACTA+GGG | 0.511698 | 7_2:+40446182 | Msa1057780:CDS |
| AGCAAATTCCAACGGCTTGG+TGG | 0.516859 | 7_2:+40446428 | Msa1057780:CDS |
| TATGTCTAGTAATTATGGCT+TGG | 0.517868 | 7_2:+40452275 | Msa1057780:three_prime_UTR |
| GGTTAAGTATATAAGATCAA+TGG | 0.521069 | 7_2:+40452048 | Msa1057780:three_prime_UTR |
| TGAAGAATAAAGTGTATGCC+AGG | 0.525694 | 7_2:+40452123 | Msa1057780:three_prime_UTR |
| CAAAACAGTCTTCAAATTCA+GGG | 0.525847 | 7_2:-40446335 | None:intergenic |
| ATAATGTTAATTAATAATCA+GGG | 0.529346 | 7_2:+40452027 | Msa1057780:exon |
| TCTAGCAAATTCCAACGGCT+TGG | 0.534107 | 7_2:+40446425 | Msa1057780:CDS |
| TAACATTATTATTTGATTTG+GGG | 0.535494 | 7_2:-40452013 | None:intergenic |
| TTGCTTATAAATTTGACTAG+TGG | 0.541860 | 7_2:-40451484 | None:intergenic |
| CTCTCAAACTTATTGACACA+GGG | 0.544383 | 7_2:-40446302 | None:intergenic |
| TCAGTGTCCACCTCTACCAT+AGG | 0.555905 | 7_2:-40451972 | None:intergenic |
| CTGAGAACAATCTCCAAACC+TGG | 0.558708 | 7_2:-40452141 | None:intergenic |
| TCATCAATCATCACTCCGAA+TGG | 0.572242 | 7_2:+40451356 | Msa1057780:CDS |
| TATTGTAACCACCAAGCCGT+TGG | 0.586616 | 7_2:-40446436 | None:intergenic |
| TCTAGCGAATTCGAACGCCT+TGG | 0.591653 | 7_2:+40451842 | Msa1057780:CDS |
| ATTTGCTAGATCAAATAAAG+AGG | 0.598413 | 7_2:-40446412 | None:intergenic |
| TTGGATTCAGATTTGTGTGA+GGG | 0.598838 | 7_2:+40451771 | Msa1057780:CDS |
| TCTCTCAAACTTATTGACAC+AGG | 0.599143 | 7_2:-40446303 | None:intergenic |
| TTTGATCTAGCAAATTCCAA+CGG | 0.609986 | 7_2:+40446420 | Msa1057780:CDS |
| TCCACCGGTTGTACTAAACT+CGG | 0.611531 | 7_2:-40446609 | None:intergenic |
| ATCCTATAAAATTATAACAG+TGG | 0.618352 | 7_2:+40446131 | Msa1057780:CDS |
| TTTGGATTCAGATTTGTGTG+AGG | 0.656640 | 7_2:+40451770 | Msa1057780:CDS |
| AGCATCTATAGTCACAACCA+AGG | 0.708480 | 7_2:-40451859 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTATAGGATTTT+AGG | - | chr7_2:40446128-40446147 | None:intergenic | 10.0% |
| !!! | AAGTATAAATTTTTACATAT+TGG | + | chr7_2:40446228-40446247 | Msa1057780:intron | 10.0% |
| !!! | AGTATAAATTTTTACATATT+GGG | + | chr7_2:40446229-40446248 | Msa1057780:intron | 10.0% |
| !!! | TATTATGAATTTCTATATTT+TGG | + | chr7_2:40446794-40446813 | Msa1057780:intron | 10.0% |
| !!! | ACTCAAAATTTTAATTTTAA+GGG | + | chr7_2:40446835-40446854 | Msa1057780:intron | 10.0% |
| !!! | TTTTTTTTTTCAAGTATAAA+TGG | + | chr7_2:40446860-40446879 | Msa1057780:intron | 10.0% |
| !!! | ATAGTGTAATTTTTAATTTA+GGG | - | chr7_2:40447684-40447703 | None:intergenic | 10.0% |
| !!! | TATAGTGTAATTTTTAATTT+AGG | - | chr7_2:40447685-40447704 | None:intergenic | 10.0% |
| !! | AATAATGATCATTTAAAAAA+TGG | + | chr7_2:40448524-40448543 | Msa1057780:intron | 10.0% |
| !!! | TTATAATAATTTTGTTATAC+TGG | - | chr7_2:40449486-40449505 | None:intergenic | 10.0% |
| !!! | ATTATTATAAAACATTGTTT+TGG | + | chr7_2:40449496-40449515 | Msa1057780:intron | 10.0% |
| !! | TTATTAAATTTCATCATATT+CGG | + | chr7_2:40450167-40450186 | Msa1057780:intron | 10.0% |
| !!! | TTAACATTATTATTTGATTT+GGG | - | chr7_2:40452017-40452036 | None:intergenic | 10.0% |
| !! | ATTAACATTATTATTTGATT+TGG | - | chr7_2:40452018-40452037 | None:intergenic | 10.0% |
| !! | AATAATGTTAATTAATAATC+AGG | + | chr7_2:40452026-40452045 | Msa1057780:exon | 10.0% |
| !! | ATAATGTTAATTAATAATCA+GGG | + | chr7_2:40452027-40452046 | Msa1057780:exon | 10.0% |
| !! | AGTAAAATAAAAAAAAAAAG+AGG | - | chr7_2:40452229-40452248 | None:intergenic | 10.0% |
| !!! | AGTTAGCAAATATATATTTT+TGG | - | chr7_2:40446181-40446200 | None:intergenic | 15.0% |
| !!! | AAAATATATATTTGCTAACT+AGG | + | chr7_2:40446181-40446200 | Msa1057780:CDS | 15.0% |
| !!! | AAATATATATTTGCTAACTA+GGG | + | chr7_2:40446182-40446201 | Msa1057780:CDS | 15.0% |
| !!! | GACTCAAAATTTTAATTTTA+AGG | + | chr7_2:40446834-40446853 | Msa1057780:intron | 15.0% |
| !!! | TAGTGTAATTTTTAATTTAG+GGG | - | chr7_2:40447683-40447702 | None:intergenic | 15.0% |
| !! | GTCTTTATATTTAAAAAGTA+TGG | - | chr7_2:40447783-40447802 | None:intergenic | 15.0% |
| !!! | TCGATAATGATATTATTTTT+AGG | + | chr7_2:40447897-40447916 | Msa1057780:intron | 15.0% |
| !!! | TCTCAAATACATAATTTTTT+CGG | - | chr7_2:40448006-40448025 | None:intergenic | 15.0% |
| !!! | AATTCCTTATTATTTTTTGT+AGG | - | chr7_2:40448055-40448074 | None:intergenic | 15.0% |
| !! | ATGCAAAAGTAATAAAAATA+AGG | - | chr7_2:40448093-40448112 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGTACAAACTTT+GGG | - | chr7_2:40448371-40448390 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGTACAAACTT+TGG | - | chr7_2:40448372-40448391 | None:intergenic | 15.0% |
| !! | AAAAATTATGTAAACACTTT+GGG | - | chr7_2:40448405-40448424 | None:intergenic | 15.0% |
| !!! | TGTTTTCTTTTTTTCAATTT+GGG | - | chr7_2:40448763-40448782 | None:intergenic | 15.0% |
| !!! | ATGTTTTCTTTTTTTCAATT+TGG | - | chr7_2:40448764-40448783 | None:intergenic | 15.0% |
| !!! | TTTAGAGTTAATTAAGTTTT+TGG | + | chr7_2:40449101-40449120 | Msa1057780:intron | 15.0% |
| !!! | AAGTGTGATTTATTTTTATA+GGG | - | chr7_2:40449159-40449178 | None:intergenic | 15.0% |
| !!! | AAAGTGTGATTTATTTTTAT+AGG | - | chr7_2:40449160-40449179 | None:intergenic | 15.0% |
| !!! | TAAAAATAAATCACACTTTT+TGG | + | chr7_2:40449161-40449180 | Msa1057780:intron | 15.0% |
| !!! | AAAGTGTGATTTTATTTTAT+AGG | + | chr7_2:40449315-40449334 | Msa1057780:intron | 15.0% |
| !!! | AAGTGTGATTTTATTTTATA+GGG | + | chr7_2:40449316-40449335 | Msa1057780:intron | 15.0% |
| !! | ACAAAATTGTGAATATTTAT+AGG | + | chr7_2:40449346-40449365 | Msa1057780:intron | 15.0% |
| !!! | TTTAAGTGATTAAATTTTGA+AGG | + | chr7_2:40449856-40449875 | Msa1057780:intron | 15.0% |
| !!! | TTAAGTGATTAAATTTTGAA+GGG | + | chr7_2:40449857-40449876 | Msa1057780:intron | 15.0% |
| !!! | TATCATTACTCTTTAAATTT+TGG | - | chr7_2:40449913-40449932 | None:intergenic | 15.0% |
| !!! | AATTAAACATTTTAACATCA+AGG | - | chr7_2:40450382-40450401 | None:intergenic | 15.0% |
| !! | TGAAAATGAAATTATTTCAA+TGG | - | chr7_2:40450712-40450731 | None:intergenic | 15.0% |
| !! | CAAAGAAATTAAAGAATTTA+TGG | + | chr7_2:40450777-40450796 | Msa1057780:intron | 15.0% |
| !! | TATATATGTTCTTAATCTTA+GGG | - | chr7_2:40450844-40450863 | None:intergenic | 15.0% |
| !! | ATATATATGTTCTTAATCTT+AGG | - | chr7_2:40450845-40450864 | None:intergenic | 15.0% |
| !! | AAAAACTATGTATATATTAG+TGG | - | chr7_2:40451280-40451299 | None:intergenic | 15.0% |
| !!! | AACTATAATTTTCTTCATAT+TGG | + | chr7_2:40451633-40451652 | Msa1057780:CDS | 15.0% |
| !!! | ACTATAATTTTCTTCATATT+GGG | + | chr7_2:40451634-40451653 | Msa1057780:CDS | 15.0% |
| !! | TTATCTATTTAAAAATCCTA+TGG | + | chr7_2:40451956-40451975 | Msa1057780:CDS | 15.0% |
| !!! | TAACATTATTATTTGATTTG+GGG | - | chr7_2:40452016-40452035 | None:intergenic | 15.0% |
| !! | ATCCTATAAAATTATAACAG+TGG | + | chr7_2:40446131-40446150 | Msa1057780:CDS | 20.0% |
| !!! | TAAATTTTTACATATTGGGT+TGG | + | chr7_2:40446233-40446252 | Msa1057780:intron | 20.0% |
| !! | TAGATTTAAAAGTTGAGTAT+AGG | + | chr7_2:40446475-40446494 | Msa1057780:CDS | 20.0% |
| !! | AGATTTAAAAGTTGAGTATA+GGG | + | chr7_2:40446476-40446495 | Msa1057780:CDS | 20.0% |
| !!! | GGATTTTCAAATAGATAATT+CGG | - | chr7_2:40446534-40446553 | None:intergenic | 20.0% |
| !! | GAATTATCTATTTGAAAATC+CGG | + | chr7_2:40446533-40446552 | Msa1057780:CDS | 20.0% |
| !!! | TATATTTTGGCTAGTAATTA+TGG | + | chr7_2:40446807-40446826 | Msa1057780:intron | 20.0% |
| !! | TATTGTAGTATAATGTTCTA+GGG | + | chr7_2:40447091-40447110 | Msa1057780:intron | 20.0% |
| !! | CACATATCTAAGTTTAATTA+AGG | - | chr7_2:40447369-40447388 | None:intergenic | 20.0% |
| !! | CTTAATTAAACTTAGATATG+TGG | + | chr7_2:40447367-40447386 | Msa1057780:intron | 20.0% |
| !!! | AAATCTTTTATTTTAAGTGG+GGG | - | chr7_2:40447659-40447678 | None:intergenic | 20.0% |
| !!! | GAAATCTTTTATTTTAAGTG+GGG | - | chr7_2:40447660-40447679 | None:intergenic | 20.0% |
| !!! | GGAAATCTTTTATTTTAAGT+GGG | - | chr7_2:40447661-40447680 | None:intergenic | 20.0% |
| !!! | AGTGTAATTTTTAATTTAGG+GGG | - | chr7_2:40447682-40447701 | None:intergenic | 20.0% |
| !!! | TTATTTTTAGGACAAAACTT+AGG | + | chr7_2:40447909-40447928 | Msa1057780:intron | 20.0% |
| !! | TTATGTATTTGAGAAAATCA+TGG | + | chr7_2:40448012-40448031 | Msa1057780:intron | 20.0% |
| !! | GAATCCTACAAAAAATAATA+AGG | + | chr7_2:40448048-40448067 | Msa1057780:intron | 20.0% |
| !! | TAAAAATAAGGAAAAAACCT+AGG | - | chr7_2:40448081-40448100 | None:intergenic | 20.0% |
| !! | GAAAAATTATGTAAACACTT+TGG | - | chr7_2:40448406-40448425 | None:intergenic | 20.0% |
| !!! | ATTATTTGAGTTCAAACTTT+GGG | - | chr7_2:40448428-40448447 | None:intergenic | 20.0% |
| !! | AATTCATTATGTTGCAATAT+GGG | - | chr7_2:40448466-40448485 | None:intergenic | 20.0% |
| !! | TAATTCATTATGTTGCAATA+TGG | - | chr7_2:40448467-40448486 | None:intergenic | 20.0% |
| !! | TTAAATGATCATTATTTGCA+GGG | - | chr7_2:40448520-40448539 | None:intergenic | 20.0% |
| !! | TTTAAATGATCATTATTTGC+AGG | - | chr7_2:40448521-40448540 | None:intergenic | 20.0% |
| !!! | TAAATGATTAAATTTTGGCA+TGG | - | chr7_2:40448579-40448598 | None:intergenic | 20.0% |
| !! | GAAGAAGATAAGATTATAAA+GGG | + | chr7_2:40448958-40448977 | Msa1057780:intron | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+AGG | - | chr7_2:40449219-40449238 | None:intergenic | 20.0% |
| !! | ATAAAGACTAAAAATGTTGA+TGG | - | chr7_2:40449233-40449252 | None:intergenic | 20.0% |
| !!! | TAAGTGATTAAATTTTGAAG+GGG | + | chr7_2:40449858-40449877 | Msa1057780:intron | 20.0% |
| !! | AATAAGAAATGAGAAAAACA+AGG | - | chr7_2:40449971-40449990 | None:intergenic | 20.0% |
| !!! | TTCTTATTTGTCAAAAACAA+TGG | + | chr7_2:40449983-40450002 | Msa1057780:intron | 20.0% |
| !! | TTAATAAGCTTATTGATCAA+TGG | - | chr7_2:40450154-40450173 | None:intergenic | 20.0% |
| !! | ACAATAAGTAAGTATATTGA+AGG | - | chr7_2:40450422-40450441 | None:intergenic | 20.0% |
| !!! | ACAATAACTCTTTTCATATA+TGG | - | chr7_2:40450486-40450505 | None:intergenic | 20.0% |
| !!! | TTATGGTGTAATAGTAATTT+TGG | - | chr7_2:40450628-40450647 | None:intergenic | 20.0% |
| !! | TAGTAAAGTTCAAAGATTAA+GGG | - | chr7_2:40451015-40451034 | None:intergenic | 20.0% |
| !! | TTAGTAAAGTTCAAAGATTA+AGG | - | chr7_2:40451016-40451035 | None:intergenic | 20.0% |
| !! | ACTTATGAAAACTTATAAAC+TGG | + | chr7_2:40451185-40451204 | Msa1057780:intron | 20.0% |
| !! | CAAAATAAAAAGAATCCATT+CGG | - | chr7_2:40451374-40451393 | None:intergenic | 20.0% |
| !!! | TAATTGGTTTCCAAATTTTT+CGG | + | chr7_2:40451806-40451825 | Msa1057780:CDS | 20.0% |
| !!! | ATCTTTAAAAGTTAGGTATA+GGG | + | chr7_2:40451896-40451915 | Msa1057780:CDS | 20.0% |
| !!! | ATAGGGTTTGTTATAAATTA+AGG | + | chr7_2:40451913-40451932 | Msa1057780:CDS | 20.0% |
| !! | AGGAAGAAATCTATTAAATT+TGG | + | chr7_2:40451933-40451952 | Msa1057780:CDS | 20.0% |
| !! | TGTAATATGTCTAGTAATTA+TGG | + | chr7_2:40452270-40452289 | Msa1057780:three_prime_UTR | 20.0% |
| !!! | TACAAATTCTAAAAAGCATA+TGG | - | chr7_2:40452319-40452338 | None:intergenic | 20.0% |
| !! | TTATTATTACTCTCTTTCAA+TGG | - | chr7_2:40452370-40452389 | None:intergenic | 20.0% |
| !! | CACCACTGTTATAATTTTAT+AGG | - | chr7_2:40446136-40446155 | None:intergenic | 25.0% |
| ! | CGAGTGACATAAAATTTAAT+TGG | + | chr7_2:40446373-40446392 | Msa1057780:CDS | 25.0% |
| ! | AATAAAGAGGTCGAAAAATT+CGG | - | chr7_2:40446402-40446421 | None:intergenic | 25.0% |
| !! | ATTTGCTAGATCAAATAAAG+AGG | - | chr7_2:40446415-40446434 | None:intergenic | 25.0% |
| !! | CTTTTAAATCTACAGAATCT+GGG | - | chr7_2:40446467-40446486 | None:intergenic | 25.0% |
| !! | ACTTTTAAATCTACAGAATC+TGG | - | chr7_2:40446468-40446487 | None:intergenic | 25.0% |
| ! | AGAATATTGTTATCAACAGA+TGG | + | chr7_2:40446733-40446752 | Msa1057780:intron | 25.0% |
| !! | TAAATGGATTCTGATTTGAT+TGG | + | chr7_2:40446876-40446895 | Msa1057780:intron | 25.0% |
| ! | AGCAAGAATATAAGATCAAA+AGG | - | chr7_2:40447072-40447091 | None:intergenic | 25.0% |
| ! | CTATTGTAGTATAATGTTCT+AGG | + | chr7_2:40447090-40447109 | Msa1057780:intron | 25.0% |
| ! | ATTGTAGTATAATGTTCTAG+GGG | + | chr7_2:40447092-40447111 | Msa1057780:intron | 25.0% |
| ! | TTCTATACCTAGTTTAATGT+AGG | - | chr7_2:40447269-40447288 | None:intergenic | 25.0% |
| !!! | CATATTCTTTAGTTTGATTG+TGG | - | chr7_2:40447482-40447501 | None:intergenic | 25.0% |
| ! | CAAAGATCAACATATATAAG+AGG | - | chr7_2:40447621-40447640 | None:intergenic | 25.0% |
| !!! | GGGAAATCTTTTATTTTAAG+TGG | - | chr7_2:40447662-40447681 | None:intergenic | 25.0% |
| ! | AAACTTAGGTACAATTCTTT+AGG | + | chr7_2:40447923-40447942 | Msa1057780:intron | 25.0% |
| ! | AATAATAAGGAATTGTACCT+AGG | + | chr7_2:40448061-40448080 | Msa1057780:intron | 25.0% |
| ! | AACAACATTTACCTACATAT+TGG | + | chr7_2:40448186-40448205 | Msa1057780:intron | 25.0% |
| ! | ACAACATTTACCTACATATT+GGG | + | chr7_2:40448187-40448206 | Msa1057780:intron | 25.0% |
| ! | TTATAACTCATGAATCTCTT+TGG | - | chr7_2:40448252-40448271 | None:intergenic | 25.0% |
| ! | AAGGAAATTATTGAGTATGT+TGG | - | chr7_2:40448347-40448366 | None:intergenic | 25.0% |
| !! | GATTATTTGAGTTCAAACTT+TGG | - | chr7_2:40448429-40448448 | None:intergenic | 25.0% |
| ! | GCAACATAATGAATTAATCA+AGG | + | chr7_2:40448471-40448490 | Msa1057780:intron | 25.0% |
| ! | GTTCATGTGTTCTTAAATTA+GGG | - | chr7_2:40448791-40448810 | None:intergenic | 25.0% |
| ! | TGTTCATGTGTTCTTAAATT+AGG | - | chr7_2:40448792-40448811 | None:intergenic | 25.0% |
| ! | TAATCTTATCTTCTTCGTTA+TGG | - | chr7_2:40448954-40448973 | None:intergenic | 25.0% |
| ! | CGAAGAAGATAAGATTATAA+AGG | + | chr7_2:40448957-40448976 | Msa1057780:intron | 25.0% |
| ! | AGATTATAAAGGGAAGATTA+TGG | + | chr7_2:40448968-40448987 | Msa1057780:intron | 25.0% |
| !! | CACTAACGAAAAATTTTGTA+GGG | - | chr7_2:40449188-40449207 | None:intergenic | 25.0% |
| !! | ACACTAACGAAAAATTTTGT+AGG | - | chr7_2:40449189-40449208 | None:intergenic | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | - | chr7_2:40449282-40449301 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | - | chr7_2:40449283-40449302 | None:intergenic | 25.0% |
| !!! | AGACTTTTTTAAATCTGCAT+TGG | - | chr7_2:40449458-40449477 | None:intergenic | 25.0% |
| ! | AGCATGTGTTGAAAATTTAT+CGG | - | chr7_2:40449599-40449618 | None:intergenic | 25.0% |
| ! | TTTCCAATTACGATCATAAA+GGG | - | chr7_2:40449623-40449642 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAGATTATGAAT+TGG | + | chr7_2:40449652-40449671 | Msa1057780:intron | 25.0% |
| ! | ATTATGAATTGGAATGTAGA+GGG | + | chr7_2:40449663-40449682 | Msa1057780:intron | 25.0% |
| ! | ATGCTAGAATTAACAATTAC+AGG | + | chr7_2:40449885-40449904 | Msa1057780:intron | 25.0% |
| ! | TTAAATGATCCATATTTGCA+AGG | + | chr7_2:40450110-40450129 | Msa1057780:intron | 25.0% |
| !!! | TGTTTTTGGCGATAAAATAT+TGG | + | chr7_2:40450246-40450265 | Msa1057780:intron | 25.0% |
| !!! | GTTTTTGGCGATAAAATATT+GGG | + | chr7_2:40450247-40450266 | Msa1057780:intron | 25.0% |
| !!! | TTTTTGGCGATAAAATATTG+GGG | + | chr7_2:40450248-40450267 | Msa1057780:intron | 25.0% |
| ! | ACTAACAAAATGCATAATCA+GGG | - | chr7_2:40450350-40450369 | None:intergenic | 25.0% |
| !! | TGTCTTTAATTTATTGAGCA+AGG | - | chr7_2:40450807-40450826 | None:intergenic | 25.0% |
| ! | TGCTCAATAAATTAAAGACA+TGG | + | chr7_2:40450807-40450826 | Msa1057780:intron | 25.0% |
| !!! | TTTTTTTATGACGTTGTTGT+TGG | - | chr7_2:40451460-40451479 | None:intergenic | 25.0% |
| ! | TGCTTATAAATTTGACTAGT+GGG | - | chr7_2:40451486-40451505 | None:intergenic | 25.0% |
| ! | TTGCTTATAAATTTGACTAG+TGG | - | chr7_2:40451487-40451506 | None:intergenic | 25.0% |
| !! | TTGTAATTTTGTAAGGTTCT+AGG | - | chr7_2:40451533-40451552 | None:intergenic | 25.0% |
| !! | TCTATGGTTGTAATTTTGTA+AGG | - | chr7_2:40451540-40451559 | None:intergenic | 25.0% |
| !! | TACTGAAAGATTTTCTTCTA+TGG | - | chr7_2:40451556-40451575 | None:intergenic | 25.0% |
| !! | TAATTTTCTTCATATTGGGT+TGG | + | chr7_2:40451638-40451657 | Msa1057780:CDS | 25.0% |
| !! | AGACTGAATCTTCAAATTTT+TGG | - | chr7_2:40451743-40451762 | None:intergenic | 25.0% |
| ! | AAAATTTGAAGATTCAGTCT+TGG | + | chr7_2:40451743-40451762 | Msa1057780:CDS | 25.0% |
| !! | GATCTTTAAAAGTTAGGTAT+AGG | + | chr7_2:40451895-40451914 | Msa1057780:CDS | 25.0% |
| ! | ATTTAAAAATCCTATGGTAG+AGG | + | chr7_2:40451962-40451981 | Msa1057780:CDS | 25.0% |
| ! | GGTTAAGTATATAAGATCAA+TGG | + | chr7_2:40452048-40452067 | Msa1057780:three_prime_UTR | 25.0% |
| !!! | TACTTTTTTGTATTTGTGAG+TGG | + | chr7_2:40452245-40452264 | Msa1057780:three_prime_UTR | 25.0% |
| CAAAACAGTCTTCAAATTCA+GGG | - | chr7_2:40446338-40446357 | None:intergenic | 30.0% | |
| TCAAAACAGTCTTCAAATTC+AGG | - | chr7_2:40446339-40446358 | None:intergenic | 30.0% | |
| TTTGATCTAGCAAATTCCAA+CGG | + | chr7_2:40446420-40446439 | Msa1057780:CDS | 30.0% | |
| ATTTGAAAATCCGGTATTAG+AGG | + | chr7_2:40446542-40446561 | Msa1057780:CDS | 30.0% | |
| ! | ACAACACTTGTCGTTTAAAA+AGG | + | chr7_2:40447172-40447191 | Msa1057780:intron | 30.0% |
| TGTAGCATTATAGTGTAGTT+GGG | + | chr7_2:40447202-40447221 | Msa1057780:intron | 30.0% | |
| ! | CTTTTTGCCTACATTAAACT+AGG | + | chr7_2:40447259-40447278 | Msa1057780:intron | 30.0% |
| CTAGGTATAGAATTGTAGTA+AGG | + | chr7_2:40447277-40447296 | Msa1057780:intron | 30.0% | |
| !! | GAAAAGCATTCTTTGTTCAT+TGG | + | chr7_2:40447314-40447333 | Msa1057780:intron | 30.0% |
| !! | TTTTGTTGCTTGTGAATGTT+TGG | - | chr7_2:40447418-40447437 | None:intergenic | 30.0% |
| !!! | GATCAAAAATTTTGACTTGC+AGG | - | chr7_2:40448159-40448178 | None:intergenic | 30.0% |
| TAGGTAAATGTTGTTAGTGA+TGG | - | chr7_2:40448181-40448200 | None:intergenic | 30.0% | |
| CAACATTTACCTACATATTG+GGG | + | chr7_2:40448188-40448207 | Msa1057780:intron | 30.0% | |
| ! | TCTTTTTCTCGAATCTCTTA+TGG | + | chr7_2:40448318-40448337 | Msa1057780:intron | 30.0% |
| ! | TTTTGTACAAACTTTGGGTA+AGG | - | chr7_2:40448366-40448385 | None:intergenic | 30.0% |
| TTATGTAAACACTTTGGGTA+AGG | - | chr7_2:40448400-40448419 | None:intergenic | 30.0% | |
| ! | AAAACTGTCATTTCACTTGT+GGG | - | chr7_2:40448675-40448694 | None:intergenic | 30.0% |
| ! | TAAAACTGTCATTTCACTTG+TGG | - | chr7_2:40448676-40448695 | None:intergenic | 30.0% |
| ! | ATGTTGTTTGCAGATATATC+CGG | - | chr7_2:40448735-40448754 | None:intergenic | 30.0% |
| ! | TGGATCTAATAAGCTTTTAC+AGG | + | chr7_2:40448914-40448933 | Msa1057780:intron | 30.0% |
| AATTACAAGCCAAGTACAAA+AGG | + | chr7_2:40449043-40449062 | Msa1057780:intron | 30.0% | |
| ! | CAAGATTTTCCTTTTGTACT+TGG | - | chr7_2:40449055-40449074 | None:intergenic | 30.0% |
| TACCAAGTTGCACAAATTAT+TGG | - | chr7_2:40449078-40449097 | None:intergenic | 30.0% | |
| TTTGATCCCTAAAATGCTTA+AGG | + | chr7_2:40449273-40449292 | Msa1057780:intron | 30.0% | |
| ATATCCAGGTCTTAAAATCT+CGG | - | chr7_2:40449391-40449410 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAAACTAATATCC+AGG | - | chr7_2:40449405-40449424 | None:intergenic | 30.0% |
| ! | TTTTGGATATCAGTTTCGTA+GGG | + | chr7_2:40449513-40449532 | Msa1057780:intron | 30.0% |
| CTTTCCAATTACGATCATAA+AGG | - | chr7_2:40449624-40449643 | None:intergenic | 30.0% | |
| CTTTATGATCGTAATTGGAA+AGG | + | chr7_2:40449622-40449641 | Msa1057780:intron | 30.0% | |
| GATTATGAATTGGAATGTAG+AGG | + | chr7_2:40449662-40449681 | Msa1057780:intron | 30.0% | |
| CAATTGTCTGATAAGTTCAA+GGG | + | chr7_2:40449739-40449758 | Msa1057780:intron | 30.0% | |
| GCAATGATTAATTGAGCTTA+GGG | + | chr7_2:40449826-40449845 | Msa1057780:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr7_2:40449945-40449964 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr7_2:40449996-40450015 | Msa1057780:intron | 30.0% | |
| GTCCAAAAGTTGTTAAAAAG+TGG | + | chr7_2:40450063-40450082 | Msa1057780:intron | 30.0% | |
| ATGTTTAGTCCTTGCAAATA+TGG | - | chr7_2:40450122-40450141 | None:intergenic | 30.0% | |
| TTCATCATATTCGGAGTTAA+TGG | + | chr7_2:40450176-40450195 | Msa1057780:intron | 30.0% | |
| GGTAGTATAATAATACGACT+TGG | + | chr7_2:40450197-40450216 | Msa1057780:intron | 30.0% | |
| GACTAACAAAATGCATAATC+AGG | - | chr7_2:40450351-40450370 | None:intergenic | 30.0% | |
| !!! | GAAAGATTATTTTAGTGTCG+AGG | + | chr7_2:40450513-40450532 | Msa1057780:intron | 30.0% |
| AAAATGACTAATCATTACCG+AGG | + | chr7_2:40450600-40450619 | Msa1057780:intron | 30.0% | |
| AAATGACTAATCATTACCGA+GGG | + | chr7_2:40450601-40450620 | Msa1057780:intron | 30.0% | |
| !! | TAATAGTAATTTTGGTCCCT+CGG | - | chr7_2:40450620-40450639 | None:intergenic | 30.0% |
| !! | AGAGACTTGTTAAGAGATAA+TGG | - | chr7_2:40450914-40450933 | None:intergenic | 30.0% |
| !! | AAGAATTTAGCTTGTTGAAG+GGG | - | chr7_2:40451228-40451247 | None:intergenic | 30.0% |
| !! | GAAGAATTTAGCTTGTTGAA+GGG | - | chr7_2:40451229-40451248 | None:intergenic | 30.0% |
| !! | AGAAGAATTTAGCTTGTTGA+AGG | - | chr7_2:40451230-40451249 | None:intergenic | 30.0% |
| TAATTTACCGCATATTTCAC+AGG | + | chr7_2:40451326-40451345 | Msa1057780:intron | 30.0% | |
| AATTTACCGCATATTTCACA+GGG | + | chr7_2:40451327-40451346 | Msa1057780:intron | 30.0% | |
| ! | CACAATTGATGATAGTGAAA+AGG | + | chr7_2:40451407-40451426 | Msa1057780:CDS | 30.0% |
| AGGGTGACATAAAGTTTAAT+TGG | + | chr7_2:40451790-40451809 | Msa1057780:CDS | 30.0% | |
| TATGTCTAGTAATTATGGCT+TGG | + | chr7_2:40452275-40452294 | Msa1057780:three_prime_UTR | 30.0% | |
| CAATGGTGAAATGTAAATTC+TGG | - | chr7_2:40452353-40452372 | None:intergenic | 30.0% | |
| CTCTCAAACTTATTGACACA+GGG | - | chr7_2:40446305-40446324 | None:intergenic | 35.0% | |
| TCTCTCAAACTTATTGACAC+AGG | - | chr7_2:40446306-40446325 | None:intergenic | 35.0% | |
| GGTTACAACATTTGCTTTCT+CGG | - | chr7_2:40446574-40446593 | None:intergenic | 35.0% | |
| ! | TCAAGTTGTGAAGATGGAAA+AGG | + | chr7_2:40446644-40446663 | Msa1057780:intron | 35.0% |
| CCAAAGAAAAACTCCAAACA+TGG | - | chr7_2:40446701-40446720 | None:intergenic | 35.0% | |
| !! | CCATGTTTGGAGTTTTTCTT+TGG | + | chr7_2:40446698-40446717 | Msa1057780:intron | 35.0% |
| TTTGGCTAGTAATTATGGCT+TGG | + | chr7_2:40446812-40446831 | Msa1057780:intron | 35.0% | |
| !! | ATAATGTTCTAGGGGATCTA+AGG | + | chr7_2:40447100-40447119 | Msa1057780:intron | 35.0% |
| GTGTAGCATTATAGTGTAGT+TGG | + | chr7_2:40447201-40447220 | Msa1057780:intron | 35.0% | |
| TTCAGTACAACACTCAGAAA+CGG | + | chr7_2:40447552-40447571 | Msa1057780:intron | 35.0% | |
| ATCTACTTGTCGTAGATTAG+AGG | + | chr7_2:40447575-40447594 | Msa1057780:intron | 35.0% | |
| ATATAAGAGGAACCGTAGTT+GGG | - | chr7_2:40447608-40447627 | None:intergenic | 35.0% | |
| TATATAAGAGGAACCGTAGT+TGG | - | chr7_2:40447609-40447628 | None:intergenic | 35.0% | |
| TGGAAGAAACTCTTTGATAG+TGG | - | chr7_2:40448232-40448251 | None:intergenic | 35.0% | |
| ! | TTTTCTCGAATCTCTTATGG+TGG | + | chr7_2:40448321-40448340 | Msa1057780:intron | 35.0% |
| CATTATGTTGCAATATGGGA+TGG | - | chr7_2:40448462-40448481 | None:intergenic | 35.0% | |
| ATGGTAAAATGCTGGGATTA+AGG | - | chr7_2:40448560-40448579 | None:intergenic | 35.0% | |
| ! | TTTTGGCATGGTAAAATGCT+GGG | - | chr7_2:40448567-40448586 | None:intergenic | 35.0% |
| !! | ATTTTGGCATGGTAAAATGC+TGG | - | chr7_2:40448568-40448587 | None:intergenic | 35.0% |
| ACGTCATCAAATTAATGACG+TGG | - | chr7_2:40448633-40448652 | None:intergenic | 35.0% | |
| TATATCCGGTAAGAAGAAGA+GGG | - | chr7_2:40448721-40448740 | None:intergenic | 35.0% | |
| ATATATCCGGTAAGAAGAAG+AGG | - | chr7_2:40448722-40448741 | None:intergenic | 35.0% | |
| ATGGTAGCTACAGAAAATAG+TGG | + | chr7_2:40448987-40449006 | Msa1057780:intron | 35.0% | |
| !! | TGTACTTGGCTTGTAATTGT+TGG | - | chr7_2:40449041-40449060 | None:intergenic | 35.0% |
| ! | TGCCAATAATTTGTGCAACT+TGG | + | chr7_2:40449073-40449092 | Msa1057780:intron | 35.0% |
| ATGCTTAAGGAAAATGTCAC+AGG | + | chr7_2:40449286-40449305 | Msa1057780:intron | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | + | chr7_2:40449287-40449306 | Msa1057780:intron | 35.0% | |
| TATCCAGGTCTTAAAATCTC+GGG | - | chr7_2:40449390-40449409 | None:intergenic | 35.0% | |
| !! | GTTTTGGATATCAGTTTCGT+AGG | + | chr7_2:40449512-40449531 | Msa1057780:intron | 35.0% |
| CTTCCCTTTATGATCGTAAT+TGG | + | chr7_2:40449617-40449636 | Msa1057780:intron | 35.0% | |
| TGAGGGAAACAAGAACAATA+TGG | + | chr7_2:40449699-40449718 | Msa1057780:intron | 35.0% | |
| GAGGGAAACAAGAACAATAT+GGG | + | chr7_2:40449700-40449719 | Msa1057780:intron | 35.0% | |
| CAAGAACAATATGGGTATTC+TGG | + | chr7_2:40449708-40449727 | Msa1057780:intron | 35.0% | |
| GCAATTGTCTGATAAGTTCA+AGG | + | chr7_2:40449738-40449757 | Msa1057780:intron | 35.0% | |
| TGACTGTTAATTGGTCAAGT+TGG | - | chr7_2:40449783-40449802 | None:intergenic | 35.0% | |
| GGCAATGATTAATTGAGCTT+AGG | + | chr7_2:40449825-40449844 | Msa1057780:intron | 35.0% | |
| TATTGGGGTAATAGTCACTT+TGG | + | chr7_2:40450263-40450282 | Msa1057780:intron | 35.0% | |
| TTGAAGTTGTGGTACATTGA+AGG | - | chr7_2:40450321-40450340 | None:intergenic | 35.0% | |
| ! | TTTTGTCGTATTCTCAGCTT+GGG | - | chr7_2:40450659-40450678 | None:intergenic | 35.0% |
| ! | ATTTTGTCGTATTCTCAGCT+TGG | - | chr7_2:40450660-40450679 | None:intergenic | 35.0% |
| TCATTTCCTTGTCTCTTTCT+AGG | + | chr7_2:40450729-40450748 | Msa1057780:intron | 35.0% | |
| AAGTTACCTAGAAAGAGACA+AGG | - | chr7_2:40450738-40450757 | None:intergenic | 35.0% | |
| TGTCTCTTTCTAGGTAACTT+CGG | + | chr7_2:40450738-40450757 | Msa1057780:intron | 35.0% | |
| AAAGTGCAGATTCTATTCTC+AGG | - | chr7_2:40450948-40450967 | None:intergenic | 35.0% | |
| ! | TGACGTTGTTGTTGGAATAT+TGG | - | chr7_2:40451452-40451471 | None:intergenic | 35.0% |
| TTTGGATTCAGATTTGTGTG+AGG | + | chr7_2:40451770-40451789 | Msa1057780:CDS | 35.0% | |
| TTGGATTCAGATTTGTGTGA+GGG | + | chr7_2:40451771-40451790 | Msa1057780:CDS | 35.0% | |
| TTTAAAGATCGACGACAATC+TGG | - | chr7_2:40451885-40451904 | None:intergenic | 35.0% | |
| ! | GTCGTCGATCTTTAAAAGTT+AGG | + | chr7_2:40451889-40451908 | Msa1057780:CDS | 35.0% |
| TAAAAATCCTATGGTAGAGG+TGG | + | chr7_2:40451965-40451984 | Msa1057780:CDS | 35.0% | |
| TGAAGAATAAAGTGTATGCC+AGG | + | chr7_2:40452123-40452142 | Msa1057780:three_prime_UTR | 35.0% | |
| AATAAAGTGTATGCCAGGTT+TGG | + | chr7_2:40452128-40452147 | Msa1057780:three_prime_UTR | 35.0% | |
| TTGCACCATTTAACCTTGAC+GGG | - | chr7_2:40446278-40446297 | None:intergenic | 40.0% | |
| GTTGCACCATTTAACCTTGA+CGG | - | chr7_2:40446279-40446298 | None:intergenic | 40.0% | |
| ! | ACTCGGATTGTTCGATTTGT+AGG | - | chr7_2:40446595-40446614 | None:intergenic | 40.0% |
| CAATCCGAGTTTAGTACAAC+CGG | + | chr7_2:40446605-40446624 | Msa1057780:CDS | 40.0% | |
| !! | AAGGCTTCAAGTTGTGAAGA+TGG | + | chr7_2:40446638-40446657 | Msa1057780:intron | 40.0% |
| !! | TTAAGGCTTCGTTGATTCCT+TGG | - | chr7_2:40446673-40446692 | None:intergenic | 40.0% |
| AGCATTATAGTGTAGTTGGG+TGG | + | chr7_2:40447205-40447224 | Msa1057780:intron | 40.0% | |
| GCTTGTGAATGTTTGGTTGT+TGG | - | chr7_2:40447411-40447430 | None:intergenic | 40.0% | |
| TATAAGAGGAACCGTAGTTG+GGG | - | chr7_2:40447607-40447626 | None:intergenic | 40.0% | |
| TGCTGGGATTAAGGAATACA+TGG | - | chr7_2:40448551-40448570 | None:intergenic | 40.0% | |
| GAATGAGAAGATGAAGACAG+GGG | - | chr7_2:40448699-40448718 | None:intergenic | 40.0% | |
| GGAATGAGAAGATGAAGACA+GGG | - | chr7_2:40448700-40448719 | None:intergenic | 40.0% | |
| TCATTCCCTCTTCTTCTTAC+CGG | + | chr7_2:40448713-40448732 | Msa1057780:intron | 40.0% | |
| AGGAGGGTAAAGAACAACAT+CGG | - | chr7_2:40448844-40448863 | None:intergenic | 40.0% | |
| TGGGTTTCAGATTGAAGCTT+TGG | + | chr7_2:40448894-40448913 | Msa1057780:intron | 40.0% | |
| !!! | TAACCCGAGATTTTAAGACC+TGG | + | chr7_2:40449384-40449403 | Msa1057780:intron | 40.0% |
| TGGAATGTAGAGGGTAAAGA+AGG | + | chr7_2:40449672-40449691 | Msa1057780:intron | 40.0% | |
| ! | AGGGTAAAGAAGGTATGTGA+GGG | + | chr7_2:40449682-40449701 | Msa1057780:intron | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr7_2:40450006-40450025 | Msa1057780:intron | 40.0% | |
| TGGAATAAGCCAAATGACGA+AGG | + | chr7_2:40450217-40450236 | Msa1057780:intron | 40.0% | |
| ACATCAAAGCCTTCGTCATT+TGG | - | chr7_2:40450229-40450248 | None:intergenic | 40.0% | |
| !! | GACGAAGGCTTTGATGTTTT+TGG | + | chr7_2:40450232-40450251 | Msa1057780:intron | 40.0% |
| !!! | CAGGGACTATTTTGAAGTTG+TGG | - | chr7_2:40450332-40450351 | None:intergenic | 40.0% |
| ! | CAGCTTGGGCTAATGTTTTA+TGG | - | chr7_2:40450645-40450664 | None:intergenic | 40.0% |
| GTTCTTAATCTTAGGGAGCA+AGG | - | chr7_2:40450837-40450856 | None:intergenic | 40.0% | |
| TGGTTGAACTTGAATGAGCA+AGG | - | chr7_2:40450894-40450913 | None:intergenic | 40.0% | |
| TCTTGTCCCTGTGAAATATG+CGG | - | chr7_2:40451336-40451355 | None:intergenic | 40.0% | |
| TCATCAATCATCACTCCGAA+TGG | + | chr7_2:40451356-40451375 | Msa1057780:CDS | 40.0% | |
| TCATCAATTGTGTTCTCAGC+AGG | - | chr7_2:40451399-40451418 | None:intergenic | 40.0% | |
| AGATTCAGTCTTGGTACGTT+TGG | + | chr7_2:40451752-40451771 | Msa1057780:CDS | 40.0% | |
| GACAAACGTGCCGAAAAATT+TGG | - | chr7_2:40451819-40451838 | None:intergenic | 40.0% | |
| AGCATCTATAGTCACAACCA+AGG | - | chr7_2:40451862-40451881 | None:intergenic | 40.0% | |
| TTTCCATATCTTGCCCGTCA+AGG | + | chr7_2:40446262-40446281 | Msa1057780:intron | 45.0% | |
| ! | TAACCTTGACGGGCAAGATA+TGG | - | chr7_2:40446268-40446287 | None:intergenic | 45.0% |
| TCTTGCCCGTCAAGGTTAAA+TGG | + | chr7_2:40446270-40446289 | Msa1057780:intron | 45.0% | |
| TCTAGCAAATTCCAACGGCT+TGG | + | chr7_2:40446425-40446444 | Msa1057780:CDS | 45.0% | |
| TATTGTAACCACCAAGCCGT+TGG | - | chr7_2:40446439-40446458 | None:intergenic | 45.0% | |
| ! | TCGGTGTTTGCCTCTAATAC+CGG | - | chr7_2:40446555-40446574 | None:intergenic | 45.0% |
| ! | TCCACCGGTTGTACTAAACT+CGG | - | chr7_2:40446612-40446631 | None:intergenic | 45.0% |
| GAAGATGGAAAAGGTGACCA+AGG | + | chr7_2:40446653-40446672 | Msa1057780:intron | 45.0% | |
| AGCCTTAAGCTAGCCATGTT+TGG | + | chr7_2:40446685-40446704 | Msa1057780:intron | 45.0% | |
| !! | CTCCAAACATGGCTAGCTTA+AGG | - | chr7_2:40446690-40446709 | None:intergenic | 45.0% |
| GGGATCTAAGGATGACTATG+TGG | + | chr7_2:40447112-40447131 | Msa1057780:intron | 45.0% | |
| ! | GATGACTATGTGGACTGTCA+AGG | + | chr7_2:40447122-40447141 | Msa1057780:intron | 45.0% |
| ATGCTCTCTCCCCAATATGT+AGG | - | chr7_2:40448200-40448219 | None:intergenic | 45.0% | |
| TGACGTGGCAGTGATTAAGT+GGG | - | chr7_2:40448618-40448637 | None:intergenic | 45.0% | |
| ATGACGTGGCAGTGATTAAG+TGG | - | chr7_2:40448619-40448638 | None:intergenic | 45.0% | |
| ! | CTGTCATTTCACTTGTGGGT+TGG | - | chr7_2:40448671-40448690 | None:intergenic | 45.0% |
| GGGAATGAGAAGATGAAGAC+AGG | - | chr7_2:40448701-40448720 | None:intergenic | 45.0% | |
| ! | CAATCTGAAACCCAAAGCAG+CGG | - | chr7_2:40448888-40448907 | None:intergenic | 45.0% |
| ! | GAGGGTAAAGAAGGTATGTG+AGG | + | chr7_2:40449681-40449700 | Msa1057780:intron | 45.0% |
| GGTGAGGTGTGACTGTTAAT+TGG | - | chr7_2:40449792-40449811 | None:intergenic | 45.0% | |
| TCATTGCCACGTCACTAATC+AGG | - | chr7_2:40449813-40449832 | None:intergenic | 45.0% | |
| CTGAGAACAATCTCCAAACC+TGG | - | chr7_2:40452144-40452163 | None:intergenic | 45.0% | |
| !!! | AATTTTAAATGATTAAATTT+TGG | - | chr7_2:40448584-40448603 | None:intergenic | 5.0% |
| !! | ATATATATATATATATGTTA+TGG | + | chr7_2:40452088-40452107 | Msa1057780:three_prime_UTR | 5.0% |
| ! | AGCAAATTCCAACGGCTTGG+TGG | + | chr7_2:40446428-40446447 | Msa1057780:CDS | 50.0% |
| TCCGAGTTTAGTACAACCGG+TGG | + | chr7_2:40446608-40446627 | Msa1057780:intron | 50.0% | |
| !! | TACAACCGGTGGATTGCTGA+AGG | + | chr7_2:40446619-40446638 | Msa1057780:intron | 50.0% |
| TGAAGCCTTCAGCAATCCAC+CGG | - | chr7_2:40446627-40446646 | None:intergenic | 50.0% | |
| GACGTGGCAGTGATTAAGTG+GGG | - | chr7_2:40448617-40448636 | None:intergenic | 50.0% | |
| ACCTCACCTGATTAGTGACG+TGG | + | chr7_2:40449804-40449823 | Msa1057780:intron | 50.0% | |
| TCTAGCGAATTCGAACGCCT+TGG | + | chr7_2:40451842-40451861 | Msa1057780:CDS | 50.0% | |
| TCAGTGTCCACCTCTACCAT+AGG | - | chr7_2:40451975-40451994 | None:intergenic | 50.0% | |
| AGAGGCAACTGCCCCAACTA+CGG | + | chr7_2:40447593-40447612 | Msa1057780:intron | 55.0% | |
| GTTCTTTACCCTCCTGTCGC+CGG | + | chr7_2:40448849-40448868 | Msa1057780:intron | 55.0% | |
| ! | TCTGAAACCCAAAGCAGCGG+CGG | - | chr7_2:40448885-40448904 | None:intergenic | 55.0% |
| GCCACGTCACTAATCAGGTG+AGG | - | chr7_2:40449808-40449827 | None:intergenic | 55.0% | |
| AACCAGATCCGGCGACAGGA+GGG | - | chr7_2:40448860-40448879 | None:intergenic | 60.0% | |
| ! | TGGTTCACCGCCGCTGCTTT+GGG | + | chr7_2:40448875-40448894 | Msa1057780:intron | 60.0% |
| TACCCTCCTGTCGCCGGATC+TGG | + | chr7_2:40448855-40448874 | Msa1057780:intron | 65.0% | |
| GAACCAGATCCGGCGACAGG+AGG | - | chr7_2:40448861-40448880 | None:intergenic | 65.0% | |
| GGTGAACCAGATCCGGCGAC+AGG | - | chr7_2:40448864-40448883 | None:intergenic | 65.0% | |
| CAGCGGCGGTGAACCAGATC+CGG | - | chr7_2:40448871-40448890 | None:intergenic | 65.0% | |
| CTGGTTCACCGCCGCTGCTT+TGG | + | chr7_2:40448874-40448893 | Msa1057780:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 40446087 | 40452405 | 40446087 | ID=Msa1057780;Name=Msa1057780 |
| chr7_2 | mRNA | 40446087 | 40452405 | 40446087 | ID=Msa1057780-mRNA-1;Parent=Msa1057780;Name=Msa1057780-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0.25|1|0|0.25|4|365|385 |
| chr7_2 | exon | 40446087 | 40446229 | 40446087 | ID=Msa1057780-mRNA-1:exon:7453;Parent=Msa1057780-mRNA-1 |
| chr7_2 | exon | 40446284 | 40446497 | 40446284 | ID=Msa1057780-mRNA-1:exon:7454;Parent=Msa1057780-mRNA-1 |
| chr7_2 | exon | 40446519 | 40446626 | 40446519 | ID=Msa1057780-mRNA-1:exon:7455;Parent=Msa1057780-mRNA-1 |
| chr7_2 | exon | 40451348 | 40452405 | 40451348 | ID=Msa1057780-mRNA-1:exon:7456;Parent=Msa1057780-mRNA-1 |
| chr7_2 | CDS | 40446087 | 40446229 | 40446087 | ID=Msa1057780-mRNA-1:cds;Parent=Msa1057780-mRNA-1 |
| chr7_2 | CDS | 40446284 | 40446497 | 40446284 | ID=Msa1057780-mRNA-1:cds;Parent=Msa1057780-mRNA-1 |
| chr7_2 | CDS | 40446519 | 40446626 | 40446519 | ID=Msa1057780-mRNA-1:cds;Parent=Msa1057780-mRNA-1 |
| chr7_2 | CDS | 40451348 | 40452040 | 40451348 | ID=Msa1057780-mRNA-1:cds;Parent=Msa1057780-mRNA-1 |
| chr7_2 | three_prime_UTR | 40452041 | 40452405 | 40452041 | ID=Msa1057780-mRNA-1:three_prime_utr;Parent=Msa1057780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
