Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023570 | XP_013449059.1 | 64.242 | 495 | 142 | 7 | 10 | 474 | 3 | 492 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023570 | A0A072U0X6 | 64.242 | 495 | 142 | 7 | 10 | 474 | 3 | 492 | 0.0 | 597 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1023570 | 0.815695 | 8.103301e-52 | -8.615850e-47 |
| Msa0017930 | Msa1023570 | 0.812647 | 3.816695e-51 | -8.615850e-47 |
| Msa0027820 | Msa1023570 | 0.822644 | 2.121096e-53 | -8.615850e-47 |
| Msa0030990 | Msa1023570 | 0.801819 | 7.520644e-49 | -8.615850e-47 |
| Msa0032920 | Msa1023570 | -0.802809 | 4.704557e-49 | -8.615850e-47 |
| Msa0032960 | Msa1023570 | -0.802160 | 6.401642e-49 | -8.615850e-47 |
| Msa0074600 | Msa1023570 | 0.803005 | 4.284158e-49 | -8.615850e-47 |
| Msa0108410 | Msa1023570 | 0.827963 | 1.170441e-54 | -8.615850e-47 |
| Msa0611210 | Msa1023570 | 0.812893 | 3.370758e-51 | -8.615850e-47 |
| Msa0626450 | Msa1023570 | 0.856248 | 3.657708e-62 | -8.615850e-47 |
| Msa0626490 | Msa1023570 | 0.853418 | 2.421375e-61 | -8.615850e-47 |
| Msa0626510 | Msa1023570 | 0.805410 | 1.353162e-49 | -8.615850e-47 |
| Msa0644410 | Msa1023570 | 0.803463 | 3.444334e-49 | -8.615850e-47 |
| Msa0651550 | Msa1023570 | 0.800844 | 1.190896e-48 | -8.615850e-47 |
| Msa0664600 | Msa1023570 | 0.858405 | 8.429526e-63 | -8.615850e-47 |
| Msa0664660 | Msa1023570 | 0.806407 | 8.350863e-50 | -8.615850e-47 |
| Msa0664710 | Msa1023570 | 0.816073 | 6.673901e-52 | -8.615850e-47 |
| Msa0709270 | Msa1023570 | 0.802580 | 5.244991e-49 | -8.615850e-47 |
| Msa0711430 | Msa1023570 | 0.813023 | 3.157149e-51 | -8.615850e-47 |
| Msa0727260 | Msa1023570 | 0.800497 | 1.402136e-48 | -8.615850e-47 |
| Msa0729270 | Msa1023570 | 0.806847 | 6.741463e-50 | -8.615850e-47 |
| Msa0741220 | Msa1023570 | 0.825318 | 5.004964e-54 | -8.615850e-47 |
| Msa0778590 | Msa1023570 | 0.800118 | 1.674206e-48 | -8.615850e-47 |
| Msa0795870 | Msa1023570 | 0.803029 | 4.235573e-49 | -8.615850e-47 |
| Msa0799970 | Msa1023570 | 0.813699 | 2.242335e-51 | -8.615850e-47 |
| Msa0815960 | Msa1023570 | 0.808094 | 3.666869e-50 | -8.615850e-47 |
| Msa0829300 | Msa1023570 | 0.807411 | 5.120875e-50 | -8.615850e-47 |
| Msa0829330 | Msa1023570 | 0.819226 | 1.297822e-52 | -8.615850e-47 |
| Msa0832120 | Msa1023570 | 0.813744 | 2.191574e-51 | -8.615850e-47 |
| Msa0835490 | Msa1023570 | 0.813893 | 2.032078e-51 | -8.615850e-47 |
| Msa0174450 | Msa1023570 | 0.815970 | 7.037226e-52 | -8.615850e-47 |
| Msa0211150 | Msa1023570 | 0.805961 | 1.036535e-49 | -8.615850e-47 |
| Msa0225100 | Msa1023570 | 0.856878 | 2.388705e-62 | -8.615850e-47 |
| Msa0231200 | Msa1023570 | 0.800642 | 1.309395e-48 | -8.615850e-47 |
| Msa0367870 | Msa1023570 | 0.834935 | 2.247476e-56 | -8.615850e-47 |
| Msa0376630 | Msa1023570 | 0.817289 | 3.562136e-52 | -8.615850e-47 |
| Msa0378720 | Msa1023570 | 0.819166 | 1.339184e-52 | -8.615850e-47 |
| Msa0403640 | Msa1023570 | 0.820427 | 6.897855e-53 | -8.615850e-47 |
| Msa0425170 | Msa1023570 | 0.821904 | 3.150048e-53 | -8.615850e-47 |
| Msa0427100 | Msa1023570 | 0.808748 | 2.659811e-50 | -8.615850e-47 |
| Msa0427120 | Msa1023570 | 0.818771 | 1.647040e-52 | -8.615850e-47 |
| Msa0460590 | Msa1023570 | 0.811629 | 6.363647e-51 | -8.615850e-47 |
| Msa0464680 | Msa1023570 | 0.806906 | 6.553039e-50 | -8.615850e-47 |
| Msa0467490 | Msa1023570 | 0.812302 | 4.539791e-51 | -8.615850e-47 |
| Msa0474730 | Msa1023570 | 0.810501 | 1.117141e-50 | -8.615850e-47 |
| Msa0980140 | Msa1023570 | 0.808053 | 3.740838e-50 | -8.615850e-47 |
| Msa1020510 | Msa1023570 | 0.829631 | 4.620973e-55 | -8.615850e-47 |
| Msa1023500 | Msa1023570 | 0.941239 | 5.872593e-101 | -8.615850e-47 |
| Msa1023570 | Msa1034500 | 0.807732 | 4.378801e-50 | -8.615850e-47 |
| Msa1023570 | Msa1036610 | 0.801319 | 9.522375e-49 | -8.615850e-47 |
| Msa1023570 | Msa1044680 | 0.830011 | 3.733294e-55 | -8.615850e-47 |
| Msa1023570 | Msa1051830 | 0.800161 | 1.640660e-48 | -8.615850e-47 |
| Msa1023570 | Msa1057780 | 0.801614 | 8.285304e-49 | -8.615850e-47 |
| Msa1023570 | Msa1062370 | 0.883245 | 5.282521e-71 | -8.615850e-47 |
| Msa1023570 | Msa1066670 | 0.802574 | 5.260520e-49 | -8.615850e-47 |
| Msa1023570 | Msa1096960 | 0.815737 | 7.928938e-52 | -8.615850e-47 |
| Msa1023570 | Msa1101090 | 0.814051 | 1.876199e-51 | -8.615850e-47 |
| Msa1023570 | Msa1132840 | 0.801816 | 7.532424e-49 | -8.615850e-47 |
| Msa1023570 | Msa1140210 | 0.809769 | 1.606521e-50 | -8.615850e-47 |
| Msa1023570 | Msa1147740 | 0.825779 | 3.891886e-54 | -8.615850e-47 |
| Msa1023570 | Msa1155170 | -0.817071 | 3.987902e-52 | -8.615850e-47 |
| Msa1023570 | Msa1225860 | -0.817116 | 3.896229e-52 | -8.615850e-47 |
| Msa1023570 | Msa1226460 | 0.803532 | 3.333279e-49 | -8.615850e-47 |
| Msa1023570 | Msa1277220 | 0.800840 | 1.193334e-48 | -8.615850e-47 |
| Msa1023570 | Msa1297230 | 0.818032 | 2.421509e-52 | -8.615850e-47 |
| Msa1023570 | Msa1343430 | 0.819503 | 1.122248e-52 | -8.615850e-47 |
| Msa1023570 | Msa1348090 | 0.814051 | 1.876199e-51 | -8.615850e-47 |
| Msa1023570 | Msa1355450 | 0.823843 | 1.113232e-53 | -8.615850e-47 |
| Msa1023570 | Msa1382300 | 0.800145 | 1.653483e-48 | -8.615850e-47 |
| Msa1023570 | Msa1382400 | 0.811617 | 6.401722e-51 | -8.615850e-47 |
| Msa1023570 | Msa1427100 | 0.807985 | 3.868033e-50 | -8.615850e-47 |
| Msa1023570 | Msa1432500 | 0.804181 | 2.443920e-49 | -8.615850e-47 |
| Msa1023570 | Msa1440560 | 0.801511 | 8.697187e-49 | -8.615850e-47 |
| Msa1023570 | Msa1440960 | 0.851619 | 7.886915e-61 | -8.615850e-47 |
| Msa1023570 | Msa1444510 | 0.802146 | 6.443815e-49 | -8.615850e-47 |
| Msa0240900 | Msa1023570 | 0.802288 | 6.023484e-49 | -8.615850e-47 |
| Msa0244640 | Msa1023570 | 0.824795 | 6.650711e-54 | -8.615850e-47 |
| Msa0266180 | Msa1023570 | 0.856445 | 3.202674e-62 | -8.615850e-47 |
| Msa0267920 | Msa1023570 | 0.814456 | 1.526379e-51 | -8.615850e-47 |
| Msa0283330 | Msa1023570 | 0.825537 | 4.440864e-54 | -8.615850e-47 |
| Msa0287740 | Msa1023570 | 0.843731 | 1.169778e-58 | -8.615850e-47 |
| Msa0290720 | Msa1023570 | 0.826635 | 2.435241e-54 | -8.615850e-47 |
| Msa0323270 | Msa1023570 | 0.810072 | 1.382170e-50 | -8.615850e-47 |
| Msa0337580 | Msa1023570 | 0.800909 | 1.155291e-48 | -8.615850e-47 |
| Msa0337700 | Msa1023570 | 0.801767 | 7.706988e-49 | -8.615850e-47 |
| Msa0519750 | Msa1023570 | 0.809738 | 1.631404e-50 | -8.615850e-47 |
| Msa0519830 | Msa1023570 | 0.818390 | 2.009671e-52 | -8.615850e-47 |
| Msa0528570 | Msa1023570 | 0.807730 | 4.382871e-50 | -8.615850e-47 |
| Msa0548470 | Msa1023570 | 0.815623 | 8.410201e-52 | -8.615850e-47 |
| Msa0557460 | Msa1023570 | 0.815192 | 1.048638e-51 | -8.615850e-47 |
| Msa0570120 | Msa1023570 | 0.802136 | 6.473052e-49 | -8.615850e-47 |
| Msa0571290 | Msa1023570 | 0.821094 | 4.845934e-53 | -8.615850e-47 |
| Msa0580370 | Msa1023570 | 0.800845 | 1.190345e-48 | -8.615850e-47 |
| Msa0583360 | Msa1023570 | -0.817561 | 3.093781e-52 | -8.615850e-47 |
| Msa0866520 | Msa1023570 | 0.807052 | 6.102123e-50 | -8.615850e-47 |
| Msa0870520 | Msa1023570 | 0.809202 | 2.126310e-50 | -8.615850e-47 |
| Msa0870540 | Msa1023570 | 0.808905 | 2.461502e-50 | -8.615850e-47 |
| Msa0935820 | Msa1023570 | 0.806801 | 6.896045e-50 | -8.615850e-47 |
| Msa0936380 | Msa1023570 | 0.823971 | 1.039007e-53 | -8.615850e-47 |
| Msa0967870 | Msa1023570 | 0.832787 | 7.746190e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023570 | MtrunA17_Chr7g0241161 | 61.075 | 465 | 127 | 7 | 10 | 460 | 3 | 427 | 0.0 | 522 |
| Msa1023570 | MtrunA17_Chr7g0241421 | 54.970 | 493 | 168 | 11 | 9 | 460 | 1 | 480 | 8.99e-157 | 457 |
| Msa1023570 | MtrunA17_Chr7g0241251 | 56.064 | 437 | 173 | 7 | 12 | 437 | 2 | 430 | 2.76e-154 | 446 |
| Msa1023570 | MtrunA17_Chr1g0166321 | 52.863 | 454 | 193 | 5 | 9 | 444 | 1 | 451 | 4.02e-148 | 432 |
| Msa1023570 | MtrunA17_Chr7g0241261 | 52.370 | 443 | 186 | 5 | 18 | 452 | 5 | 430 | 4.59e-142 | 414 |
| Msa1023570 | MtrunA17_Chr7g0237451 | 49.698 | 497 | 182 | 12 | 9 | 462 | 1 | 472 | 4.24e-132 | 390 |
| Msa1023570 | MtrunA17_Chr7g0241201 | 58.491 | 371 | 140 | 4 | 10 | 370 | 3 | 369 | 1.60e-131 | 385 |
| Msa1023570 | MtrunA17_Chr7g0241431 | 49.061 | 479 | 165 | 12 | 28 | 460 | 1 | 446 | 1.15e-129 | 383 |
| Msa1023570 | MtrunA17_Chr7g0241431 | 28.745 | 247 | 124 | 9 | 22 | 236 | 220 | 446 | 5.42e-14 | 73.9 |
| Msa1023570 | MtrunA17_Chr7g0218371 | 49.095 | 497 | 153 | 12 | 9 | 460 | 1 | 442 | 1.25e-127 | 378 |
| Msa1023570 | MtrunA17_Chr7g0241271 | 62.162 | 333 | 116 | 5 | 9 | 333 | 1 | 331 | 8.83e-119 | 351 |
| Msa1023570 | MtrunA17_Chr7g0241331 | 40.990 | 505 | 239 | 11 | 20 | 473 | 2 | 498 | 4.02e-107 | 327 |
| Msa1023570 | MtrunA17_Chr7g0241331 | 29.412 | 238 | 134 | 10 | 19 | 234 | 254 | 479 | 1.35e-13 | 72.8 |
| Msa1023570 | MtrunA17_Chr7g0239921 | 40.000 | 505 | 250 | 11 | 1 | 474 | 19 | 501 | 5.13e-95 | 296 |
| Msa1023570 | MtrunA17_Chr7g0239731 | 39.095 | 486 | 240 | 10 | 17 | 462 | 4 | 473 | 1.45e-94 | 294 |
| Msa1023570 | MtrunA17_Chr7g0238971 | 40.373 | 483 | 239 | 11 | 12 | 458 | 2 | 471 | 1.59e-93 | 291 |
| Msa1023570 | MtrunA17_Chr7g0241291 | 52.597 | 308 | 126 | 6 | 165 | 456 | 9 | 312 | 1.45e-90 | 278 |
| Msa1023570 | MtrunA17_Chr7g0241291 | 26.364 | 220 | 133 | 6 | 19 | 234 | 116 | 310 | 6.03e-12 | 66.6 |
| Msa1023570 | MtrunA17_Chr7g0238961 | 38.878 | 517 | 236 | 13 | 17 | 474 | 260 | 755 | 3.20e-90 | 290 |
| Msa1023570 | MtrunA17_Chr7g0238961 | 32.440 | 373 | 188 | 14 | 13 | 347 | 2 | 348 | 2.06e-36 | 142 |
| Msa1023570 | MtrunA17_Chr7g0239911 | 40.129 | 466 | 213 | 11 | 22 | 437 | 10 | 459 | 2.37e-89 | 280 |
| Msa1023570 | MtrunA17_Chr7g0239911 | 26.267 | 217 | 124 | 7 | 271 | 454 | 13 | 226 | 2.46e-13 | 72.0 |
| Msa1023570 | MtrunA17_Chr7g0239831 | 40.719 | 501 | 237 | 14 | 16 | 474 | 3 | 485 | 2.13e-87 | 276 |
| Msa1023570 | MtrunA17_Chr7g0239851 | 39.279 | 499 | 241 | 16 | 14 | 474 | 4 | 478 | 3.65e-85 | 270 |
| Msa1023570 | MtrunA17_Chr7g0239851 | 26.778 | 239 | 160 | 4 | 1 | 234 | 237 | 465 | 5.05e-15 | 77.4 |
| Msa1023570 | MtrunA17_Chr3g0078631 | 41.775 | 462 | 216 | 14 | 21 | 458 | 21 | 453 | 7.01e-85 | 268 |
| Msa1023570 | MtrunA17_Chr4g0008511 | 35.659 | 516 | 254 | 14 | 16 | 473 | 2 | 497 | 5.90e-84 | 267 |
| Msa1023570 | MtrunA17_Chr7g0239891 | 38.213 | 526 | 225 | 18 | 9 | 460 | 1 | 500 | 2.60e-82 | 263 |
| Msa1023570 | MtrunA17_Chr7g0239841 | 37.587 | 431 | 219 | 9 | 16 | 408 | 4 | 422 | 6.14e-79 | 252 |
| Msa1023570 | MtrunA17_Chr7g0239901 | 39.919 | 491 | 230 | 12 | 21 | 462 | 37 | 511 | 7.90e-79 | 254 |
| Msa1023570 | MtrunA17_Chr7g0241211 | 62.500 | 192 | 70 | 1 | 269 | 460 | 1 | 190 | 7.31e-77 | 238 |
| Msa1023570 | MtrunA17_Chr7g0241211 | 27.014 | 211 | 124 | 7 | 25 | 234 | 3 | 184 | 6.34e-14 | 70.5 |
| Msa1023570 | MtrunA17_Chr4g0008481 | 33.527 | 516 | 264 | 12 | 16 | 462 | 3 | 508 | 1.64e-75 | 246 |
| Msa1023570 | MtrunA17_Chr7g0241511 | 43.316 | 374 | 132 | 9 | 158 | 469 | 8 | 363 | 5.67e-71 | 229 |
| Msa1023570 | MtrunA17_Chr7g0241511 | 26.047 | 215 | 140 | 7 | 16 | 219 | 99 | 305 | 1.20e-12 | 69.3 |
| Msa1023570 | MtrunA17_Chr4g0007631 | 32.613 | 509 | 272 | 13 | 12 | 459 | 2 | 500 | 5.75e-70 | 231 |
| Msa1023570 | MtrunA17_Chr4g0007341 | 33.403 | 476 | 247 | 16 | 11 | 437 | 2 | 456 | 2.38e-64 | 215 |
| Msa1023570 | MtrunA17_Chr4g0007251 | 33.595 | 509 | 254 | 16 | 9 | 463 | 1 | 479 | 2.02e-61 | 207 |
| Msa1023570 | MtrunA17_Chr4g0007271 | 29.941 | 511 | 260 | 10 | 12 | 463 | 2 | 473 | 5.62e-57 | 196 |
| Msa1023570 | MtrunA17_Chr2g0291981 | 70.732 | 123 | 35 | 1 | 9 | 130 | 1 | 123 | 1.64e-53 | 176 |
| Msa1023570 | MtrunA17_Chr7g0241171 | 61.224 | 147 | 55 | 1 | 314 | 460 | 3 | 147 | 2.06e-51 | 171 |
| Msa1023570 | MtrunA17_Chr7g0241311 | 50.286 | 175 | 75 | 5 | 23 | 186 | 11 | 184 | 1.28e-47 | 164 |
| Msa1023570 | MtrunA17_Chr7g0239791 | 38.129 | 278 | 154 | 5 | 196 | 462 | 3 | 273 | 1.48e-47 | 165 |
| Msa1023570 | MtrunA17_Chr7g0239791 | 27.311 | 238 | 142 | 7 | 3 | 234 | 53 | 265 | 7.67e-16 | 77.8 |
| Msa1023570 | MtrunA17_Chr7g0241361 | 45.291 | 223 | 98 | 4 | 22 | 240 | 16 | 218 | 6.45e-47 | 163 |
| Msa1023570 | MtrunA17_Chr3g0110221 | 32.902 | 386 | 164 | 11 | 101 | 447 | 1 | 330 | 1.56e-46 | 166 |
| Msa1023570 | MtrunA17_Chr7g0241231 | 56.944 | 144 | 54 | 2 | 19 | 154 | 4 | 147 | 2.12e-46 | 158 |
| Msa1023570 | MtrunA17_Chr7g0241351 | 44.335 | 203 | 107 | 3 | 20 | 218 | 14 | 214 | 4.21e-42 | 149 |
| Msa1023570 | MtrunA17_Chr7g0239861 | 31.116 | 421 | 226 | 14 | 78 | 460 | 4 | 398 | 1.26e-41 | 153 |
| Msa1023570 | MtrunA17_Chr4g0007231 | 39.035 | 228 | 111 | 8 | 16 | 219 | 3 | 226 | 1.08e-39 | 143 |
| Msa1023570 | MtrunA17_Chr7g0239761 | 35.473 | 296 | 142 | 8 | 8 | 295 | 17 | 271 | 6.08e-38 | 140 |
| Msa1023570 | MtrunA17_Chr7g0239741 | 40.394 | 203 | 102 | 4 | 271 | 460 | 27 | 223 | 1.71e-35 | 131 |
| Msa1023570 | MtrunA17_Chr7g0241301 | 54.545 | 121 | 30 | 2 | 12 | 132 | 2 | 97 | 1.03e-33 | 123 |
| Msa1023570 | MtrunA17_Chr1g0150201 | 49.686 | 159 | 70 | 5 | 101 | 252 | 1 | 156 | 1.38e-33 | 124 |
| Msa1023570 | MtrunA17_Chr1g0150211 | 61.224 | 98 | 38 | 0 | 269 | 366 | 1 | 98 | 1.40e-32 | 121 |
| Msa1023570 | MtrunA17_Chr7g0241181 | 54.701 | 117 | 53 | 0 | 257 | 373 | 3 | 119 | 4.52e-32 | 119 |
| Msa1023570 | MtrunA17_Chr7g0241181 | 33.654 | 104 | 63 | 2 | 9 | 111 | 1 | 99 | 5.83e-11 | 60.1 |
| Msa1023570 | MtrunA17_Chr7g0241281 | 51.163 | 129 | 33 | 1 | 309 | 437 | 1 | 99 | 2.87e-31 | 116 |
| Msa1023570 | MtrunA17_Chr4g0008491 | 29.156 | 391 | 183 | 11 | 95 | 473 | 2 | 310 | 3.57e-31 | 122 |
| Msa1023570 | MtrunA17_Chr7g0237481 | 55.752 | 113 | 47 | 1 | 254 | 366 | 3 | 112 | 1.94e-30 | 116 |
| Msa1023570 | MtrunA17_Chr7g0239751 | 39.252 | 214 | 103 | 6 | 23 | 224 | 33 | 231 | 1.87e-29 | 115 |
| Msa1023570 | MtrunA17_Chr2g0292001 | 41.463 | 164 | 65 | 3 | 309 | 441 | 1 | 164 | 4.98e-29 | 113 |
| Msa1023570 | MtrunA17_Chr7g0263451 | 33.929 | 280 | 138 | 8 | 218 | 464 | 2 | 267 | 8.34e-29 | 114 |
| Msa1023570 | MtrunA17_Chr1g0212741 | 31.818 | 242 | 145 | 4 | 13 | 239 | 2 | 238 | 4.81e-26 | 106 |
| Msa1023570 | MtrunA17_Chr8g0355351 | 30.705 | 241 | 146 | 7 | 14 | 240 | 5 | 238 | 2.48e-25 | 103 |
| Msa1023570 | MtrunA17_Chr8g0355351 | 27.273 | 231 | 132 | 7 | 257 | 453 | 3 | 231 | 1.90e-17 | 81.6 |
| Msa1023570 | MtrunA17_Chr2g0291991 | 46.667 | 120 | 63 | 1 | 184 | 303 | 1 | 119 | 1.71e-23 | 95.5 |
| Msa1023570 | MtrunA17_Chr7g0229201 | 29.461 | 241 | 146 | 4 | 16 | 239 | 4 | 237 | 4.05e-23 | 97.8 |
| Msa1023570 | MtrunA17_Chr0c02g0489781 | 29.461 | 241 | 146 | 4 | 16 | 239 | 4 | 237 | 4.05e-23 | 97.8 |
| Msa1023570 | MtrunA17_Chr7g0241321 | 34.043 | 188 | 88 | 3 | 309 | 460 | 1 | 188 | 1.60e-22 | 95.1 |
| Msa1023570 | MtrunA17_Chr4g0007321 | 30.496 | 282 | 148 | 9 | 218 | 458 | 11 | 285 | 1.42e-21 | 94.7 |
| Msa1023570 | MtrunA17_Chr4g0007321 | 29.545 | 264 | 137 | 11 | 3 | 241 | 47 | 286 | 4.08e-15 | 75.9 |
| Msa1023570 | MtrunA17_Chr7g0241191 | 42.308 | 130 | 62 | 5 | 101 | 220 | 1 | 127 | 1.75e-18 | 82.4 |
| Msa1023570 | MtrunA17_Chr7g0241501 | 81.250 | 48 | 9 | 0 | 28 | 75 | 1 | 48 | 3.95e-18 | 78.2 |
| Msa1023570 | MtrunA17_Chr8g0345251 | 25.849 | 383 | 218 | 13 | 124 | 460 | 16 | 378 | 1.50e-15 | 78.2 |
| Msa1023570 | MtrunA17_Chr7g0241221 | 55.714 | 70 | 29 | 1 | 173 | 240 | 2 | 71 | 2.51e-15 | 70.9 |
| Msa1023570 | MtrunA17_Chr7g0237471 | 42.149 | 121 | 56 | 6 | 109 | 217 | 1 | 119 | 9.81e-15 | 71.2 |
| Msa1023570 | MtrunA17_Chr1g0212761 | 32.558 | 129 | 74 | 3 | 17 | 140 | 2 | 122 | 4.32e-14 | 69.3 |
| Msa1023570 | MtrunA17_Chr7g0263461 | 71.429 | 42 | 12 | 0 | 23 | 64 | 40 | 81 | 4.97e-14 | 67.8 |
| Msa1023570 | MtrunA17_Chr1g0212771 | 39.560 | 91 | 50 | 1 | 16 | 106 | 3 | 88 | 2.62e-13 | 68.9 |
| Msa1023570 | MtrunA17_Chr7g0229211 | 38.750 | 80 | 44 | 1 | 16 | 95 | 2 | 76 | 1.22e-12 | 68.2 |
| Msa1023570 | MtrunA17_Chr8g0355371 | 40.000 | 80 | 43 | 1 | 16 | 95 | 2 | 76 | 4.48e-12 | 66.2 |
| Msa1023570 | MtrunA17_Chr0c02g0489791 | 37.500 | 80 | 45 | 1 | 16 | 95 | 2 | 76 | 1.11e-11 | 65.1 |
| Msa1023570 | MtrunA17_Chr1g0212781 | 37.113 | 97 | 54 | 2 | 22 | 116 | 6 | 97 | 2.10e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023570 | AT5G01150.1 | 31.481 | 486 | 284 | 10 | 15 | 460 | 3 | 479 | 5.14e-55 | 191 |
| Msa1023570 | AT5G01130.1 | 31.866 | 477 | 279 | 12 | 15 | 473 | 3 | 451 | 9.70e-53 | 184 |
| Msa1023570 | AT3G09140.2 | 30.986 | 497 | 283 | 13 | 17 | 460 | 4 | 493 | 1.20e-50 | 180 |
| Msa1023570 | AT5G01120.1 | 29.860 | 499 | 301 | 10 | 23 | 473 | 10 | 507 | 2.78e-50 | 179 |
| Msa1023570 | AT5G01140.1 | 29.363 | 487 | 285 | 10 | 15 | 473 | 3 | 458 | 3.21e-46 | 167 |
| Msa1023570 | AT3G09140.1 | 29.143 | 525 | 284 | 14 | 17 | 460 | 4 | 521 | 4.21e-45 | 165 |
| Msa1023570 | AT5G43240.1 | 30.816 | 490 | 273 | 12 | 23 | 456 | 10 | 489 | 2.93e-44 | 162 |
| Msa1023570 | AT5G43240.3 | 30.816 | 490 | 273 | 12 | 23 | 456 | 10 | 489 | 2.93e-44 | 162 |
| Msa1023570 | AT5G43240.4 | 30.816 | 490 | 273 | 12 | 23 | 456 | 10 | 489 | 2.93e-44 | 162 |
| Msa1023570 | AT3G09110.1 | 32.298 | 322 | 200 | 5 | 22 | 333 | 9 | 322 | 3.12e-42 | 153 |
| Msa1023570 | AT3G09120.1 | 33.019 | 318 | 186 | 8 | 19 | 319 | 3 | 310 | 2.69e-39 | 144 |
| Msa1023570 | AT5G37320.1 | 28.361 | 476 | 269 | 16 | 33 | 456 | 20 | 475 | 1.78e-34 | 135 |
| Msa1023570 | AT5G43240.2 | 29.107 | 347 | 190 | 8 | 173 | 473 | 31 | 367 | 1.45e-16 | 81.6 |
Find 75 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTGAAGCAGTGAAATT+TGG | 0.215494 | 7_1:-51629256 | Msa1023570:CDS |
| AAGAGTGCCATTAACAATTA+TGG | 0.233920 | 7_1:-51628203 | Msa1023570:CDS |
| GATCCTAAATCCTCTCTTTC+GGG | 0.240762 | 7_1:-51628235 | Msa1023570:CDS |
| GAGGAAATTGTCGTTGATAT+TGG | 0.290428 | 7_1:-51628094 | Msa1023570:CDS |
| AAATCTTTGACCACAGATAT+TGG | 0.298129 | 7_1:+51629191 | None:intergenic |
| TGATCCTAAATCCTCTCTTT+CGG | 0.322652 | 7_1:-51628236 | Msa1023570:CDS |
| GATTTGTTTCTTGATGAAAA+TGG | 0.322690 | 7_1:-51628983 | Msa1023570:CDS |
| GTGTCTTTGTGGACGGTTTA+CGG | 0.348361 | 7_1:-51629029 | Msa1023570:CDS |
| CAAAGTTAGCTTGAAAGTTA+TGG | 0.360081 | 7_1:-51629398 | Msa1023570:CDS |
| CCTCCCGAAAGAGAGGATTT+AGG | 0.363934 | 7_1:+51628232 | None:intergenic |
| ATTTCCTCTATGTCATTTAG+AGG | 0.364076 | 7_1:+51628109 | None:intergenic |
| TCCGTAACCATAATTGTTAA+TGG | 0.379272 | 7_1:+51628196 | None:intergenic |
| AGTTTCTTAACATTGCCTTT+AGG | 0.383949 | 7_1:-51629310 | Msa1023570:CDS |
| CTACGTTTGCTTCAGATGAA+TGG | 0.389089 | 7_1:-51628887 | Msa1023570:CDS |
| TCAACATCTGCTTTGACTAA+TGG | 0.392693 | 7_1:-51627941 | Msa1023570:CDS |
| TCCACTCGAAACATTCTGTT+TGG | 0.394895 | 7_1:-51628541 | Msa1023570:CDS |
| GCCATTAACAATTATGGTTA+CGG | 0.409007 | 7_1:-51628197 | Msa1023570:CDS |
| TAACCTTCCATTGAGTTCCT+TGG | 0.415613 | 7_1:+51629148 | None:intergenic |
| GCTGCGTTTACTCACAAATC+AGG | 0.417974 | 7_1:-51628280 | Msa1023570:CDS |
| GAAGAGGGTAAGATTGGTAT+TGG | 0.419917 | 7_1:-51628622 | Msa1023570:CDS |
| ACTCACCTATGTACTGTTTG+AGG | 0.434750 | 7_1:+51627918 | None:intergenic |
| TGCAAATCAATCAAGTGAAC+AGG | 0.437476 | 7_1:-51629425 | Msa1023570:CDS |
| CAATCTGAAGAGGGTAAGAT+TGG | 0.438944 | 7_1:-51628628 | Msa1023570:CDS |
| AAGTTATGGTGGACAAAGTA+AGG | 0.476932 | 7_1:-51629384 | Msa1023570:CDS |
| CAATATTCAGCTTGAGCTTG+TGG | 0.489898 | 7_1:+51629122 | None:intergenic |
| GGTAAGATTGGTATTGGAAA+GGG | 0.492219 | 7_1:-51628616 | Msa1023570:CDS |
| AATATCAATGCAGCTTAAAG+AGG | 0.495387 | 7_1:+51628432 | None:intergenic |
| TGGAATCAGAAGTGTCTTTG+TGG | 0.499620 | 7_1:-51629040 | Msa1023570:CDS |
| GGAGTGTTGCAAATGCTAGA+AGG | 0.519900 | 7_1:-51628460 | Msa1023570:CDS |
| TGGTTCCTTACTCCCAATGT+AGG | 0.523927 | 7_1:+51628322 | None:intergenic |
| ATCAGAAGTGTCTTTGTGGA+CGG | 0.527393 | 7_1:-51629036 | Msa1023570:CDS |
| TCATCAAGAAACAAATCTCT+CGG | 0.528729 | 7_1:+51628989 | None:intergenic |
| AAAGTTGTGTATGCTGAGGC+TGG | 0.537208 | 7_1:-51629358 | Msa1023570:CDS |
| CGTTGATATTGGAGTGAAGG+AGG | 0.544247 | 7_1:-51628083 | Msa1023570:intron |
| TGTCGTTGATATTGGAGTGA+AGG | 0.545995 | 7_1:-51628086 | Msa1023570:CDS |
| TCTGACCGCAAACATCTCTC+AGG | 0.547244 | 7_1:+51628382 | None:intergenic |
| AGTCTTGCAATAGTACCTAA+AGG | 0.556108 | 7_1:+51629295 | None:intergenic |
| ACAGCAACCAAGGAACTCAA+TGG | 0.558269 | 7_1:-51629155 | Msa1023570:CDS |
| GGCTTATTCAGGTTGCACAT+AGG | 0.560310 | 7_1:+51627034 | None:intergenic |
| GAAACCAACATATGCTGATG+TGG | 0.560393 | 7_1:-51628656 | Msa1023570:CDS |
| AACGCTACTTATCGGCAAGA+AGG | 0.561476 | 7_1:-51628834 | Msa1023570:CDS |
| GGGTAAGATTGGTATTGGAA+AGG | 0.563253 | 7_1:-51628617 | Msa1023570:CDS |
| ATACATCTGTAGTATTTCCT+CGG | 0.565957 | 7_1:+51629091 | None:intergenic |
| TATTGCAAGACTCGTTGCTA+AGG | 0.567646 | 7_1:-51629284 | Msa1023570:CDS |
| GCTGATGCTGATGAAACTAC+TGG | 0.567871 | 7_1:-51628572 | Msa1023570:CDS |
| GGTCCCTCTAAATGACATAG+AGG | 0.569467 | 7_1:-51628113 | Msa1023570:CDS |
| TTTCCTCTATGTCATTTAGA+GGG | 0.570470 | 7_1:+51628110 | None:intergenic |
| AAGCCCACATCAGCATATGT+TGG | 0.571967 | 7_1:+51628652 | None:intergenic |
| TGCAAATCCTCCCGAAAGAG+AGG | 0.577572 | 7_1:+51628225 | None:intergenic |
| CAAGAAACAAATCTCTCGGA+CGG | 0.592120 | 7_1:+51628993 | None:intergenic |
| ACTACAGATGTATTCAATGT+GGG | 0.593405 | 7_1:-51629081 | Msa1023570:CDS |
| AGTTAGCTTGAAAGTTATGG+TGG | 0.596863 | 7_1:-51629395 | Msa1023570:CDS |
| ATCAGCTTATCCTCTTCAGA+TGG | 0.598589 | 7_1:+51628589 | None:intergenic |
| CCTAAATCCTCTCTTTCGGG+AGG | 0.609428 | 7_1:-51628232 | Msa1023570:CDS |
| TTTAAGATAAAGTCTGTCAG+AGG | 0.610371 | 7_1:+51628682 | None:intergenic |
| AATGGCCTCAAACAGTACAT+AGG | 0.613552 | 7_1:-51627923 | Msa1023570:intron |
| AGGAAATGCTACAGCAACCA+AGG | 0.618418 | 7_1:-51629165 | Msa1023570:CDS |
| ACACTATCAAATGATGACAC+TGG | 0.620139 | 7_1:+51628157 | None:intergenic |
| TGAGTCCTGAGAGATGTTTG+CGG | 0.621019 | 7_1:-51628387 | Msa1023570:CDS |
| ACCAAACAGAATGTTTCGAG+TGG | 0.623174 | 7_1:+51628540 | None:intergenic |
| AAAGGGCTTACCATCTGAAG+AGG | 0.626078 | 7_1:-51628599 | Msa1023570:CDS |
| TTCATATCTAGAGAGAATGA+AGG | 0.632183 | 7_1:-51628134 | Msa1023570:CDS |
| GCTACTTATCGGCAAGAAGG+AGG | 0.633101 | 7_1:-51628831 | Msa1023570:intron |
| AAACCAACATATGCTGATGT+GGG | 0.633184 | 7_1:-51628655 | Msa1023570:CDS |
| ATCTAGATCACCAATATCTG+TGG | 0.636073 | 7_1:-51629201 | Msa1023570:CDS |
| TACTACAGATGTATTCAATG+TGG | 0.641904 | 7_1:-51629082 | Msa1023570:CDS |
| CAACCAAGGAACTCAATGGA+AGG | 0.644395 | 7_1:-51629151 | Msa1023570:CDS |
| ATTAGTCAAAGCAGATGTTG+AGG | 0.644403 | 7_1:+51627943 | None:intergenic |
| TGTGGGCTTACAATCTGAAG+AGG | 0.646031 | 7_1:-51628638 | Msa1023570:CDS |
| TAGCAGTGCAATCTTTACAA+TGG | 0.647841 | 7_1:-51629455 | Msa1023570:CDS |
| GTGGGCTTACAATCTGAAGA+GGG | 0.663821 | 7_1:-51628637 | Msa1023570:CDS |
| GATCATTAGGGATCACACAA+AGG | 0.686381 | 7_1:+51628921 | None:intergenic |
| TCTGTGGTCAAAGATTTGCA+AGG | 0.689564 | 7_1:-51629185 | Msa1023570:CDS |
| ATTTGCAACACTCCTCCCAG+AGG | 0.732067 | 7_1:+51628469 | None:intergenic |
| TGAATATTGATGACACACCG+AGG | 0.765078 | 7_1:-51629108 | Msa1023570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATTGATAAGAAATGTA+AGG | + | chr7_1:51629009-51629028 | None:intergenic | 15.0% |
| !! | TTATATATCTGTTTAATGAA+AGG | - | chr7_1:51629073-51629092 | Msa1023570:CDS | 15.0% |
| !!! | ATAATGTATAAAGTGTTATG+AGG | + | chr7_1:51628607-51628626 | None:intergenic | 20.0% |
| !! | TTTGCATTAATGTAAACAAA+TGG | + | chr7_1:51628857-51628876 | None:intergenic | 20.0% |
| !! | CTTTAATAATCATTTGTACA+TGG | + | chr7_1:51629113-51629132 | None:intergenic | 20.0% |
| !! | ATAGGTATACTTAATGATTA+AGG | + | chr7_1:51629383-51629402 | None:intergenic | 20.0% |
| ! | AATATTGAAGCAGTGAAATT+TGG | - | chr7_1:51627222-51627241 | Msa1023570:intron | 25.0% |
| ! | CTTCTGATTCCAAATAAAAA+TGG | + | chr7_1:51627430-51627449 | None:intergenic | 25.0% |
| !! | GATTTGTTTCTTGATGAAAA+TGG | - | chr7_1:51627495-51627514 | Msa1023570:intron | 25.0% |
| !!! | TGATGAAAATGGTTTTGTTA+TGG | - | chr7_1:51627506-51627525 | Msa1023570:intron | 25.0% |
| ! | ATATCTGTGTTTATATGTGT+AGG | - | chr7_1:51627735-51627754 | Msa1023570:intron | 25.0% |
| ! | CGAGAAATATTAAAAGGAAA+AGG | + | chr7_1:51628453-51628472 | None:intergenic | 25.0% |
| ! | TGCAATCGAGAAATATTAAA+AGG | + | chr7_1:51628459-51628478 | None:intergenic | 25.0% |
| ! | TTATCTAATATCTATTGTGC+AGG | - | chr7_1:51628485-51628504 | Msa1023570:CDS | 25.0% |
| ! | TATCTAATATCTATTGTGCA+GGG | - | chr7_1:51628486-51628505 | Msa1023570:CDS | 25.0% |
| ! | AACTACATACTACTACTAAT+TGG | + | chr7_1:51628738-51628757 | None:intergenic | 25.0% |
| ! | ATTAGTAGTAGTATGTAGTT+TGG | - | chr7_1:51628738-51628757 | Msa1023570:intron | 25.0% |
| ! | TACCATCTTCACATAAAAAT+TGG | - | chr7_1:51628807-51628826 | Msa1023570:intron | 25.0% |
| ! | TTTACATTAATGCAAATCGT+GGG | - | chr7_1:51628861-51628880 | Msa1023570:CDS | 25.0% |
| ! | AGTACTACTTATAACAAGTA+AGG | + | chr7_1:51629053-51629072 | None:intergenic | 25.0% |
| !!! | TGATCTTTTTTCCTTAATCA+TGG | - | chr7_1:51629247-51629266 | Msa1023570:CDS | 25.0% |
| ! | CAAAGTTAGCTTGAAAGTTA+TGG | - | chr7_1:51627080-51627099 | Msa1023570:intron | 30.0% |
| AGTTTCTTAACATTGCCTTT+AGG | - | chr7_1:51627168-51627187 | Msa1023570:intron | 30.0% | |
| AAATCTTTGACCACAGATAT+TGG | + | chr7_1:51627290-51627309 | None:intergenic | 30.0% | |
| ATACATCTGTAGTATTTCCT+CGG | + | chr7_1:51627390-51627409 | None:intergenic | 30.0% | |
| TACTACAGATGTATTCAATG+TGG | - | chr7_1:51627396-51627415 | Msa1023570:intron | 30.0% | |
| ACTACAGATGTATTCAATGT+GGG | - | chr7_1:51627397-51627416 | Msa1023570:intron | 30.0% | |
| !! | GGAGATTGACCATTTTTATT+TGG | - | chr7_1:51627418-51627437 | Msa1023570:intron | 30.0% |
| TCATCAAGAAACAAATCTCT+CGG | + | chr7_1:51627492-51627511 | None:intergenic | 30.0% | |
| !! | GACTTTTAACTGGATCATTA+GGG | + | chr7_1:51627572-51627591 | None:intergenic | 30.0% |
| !! | AGACTTTTAACTGGATCATT+AGG | + | chr7_1:51627573-51627592 | None:intergenic | 30.0% |
| ! | TTTAAGATAAAGTCTGTCAG+AGG | + | chr7_1:51627799-51627818 | None:intergenic | 30.0% |
| AATATCAATGCAGCTTAAAG+AGG | + | chr7_1:51628049-51628068 | None:intergenic | 30.0% | |
| !!! | CTGTTTTGATTGGTAATATC+TGG | + | chr7_1:51628179-51628198 | None:intergenic | 30.0% |
| ! | TACTCACAAATCAGGTTTTA+AGG | - | chr7_1:51628206-51628225 | Msa1023570:CDS | 30.0% |
| !! | AAGAGTGCCATTAACAATTA+TGG | - | chr7_1:51628275-51628294 | Msa1023570:CDS | 30.0% |
| GCCATTAACAATTATGGTTA+CGG | - | chr7_1:51628281-51628300 | Msa1023570:CDS | 30.0% | |
| TCCGTAACCATAATTGTTAA+TGG | + | chr7_1:51628285-51628304 | None:intergenic | 30.0% | |
| TTCATATCTAGAGAGAATGA+AGG | - | chr7_1:51628344-51628363 | Msa1023570:CDS | 30.0% | |
| ! | TTTCCTCTATGTCATTTAGA+GGG | + | chr7_1:51628371-51628390 | None:intergenic | 30.0% |
| ! | ATTTCCTCTATGTCATTTAG+AGG | + | chr7_1:51628372-51628391 | None:intergenic | 30.0% |
| !!! | AAGTGTTATGAGGTTTTGTT+TGG | + | chr7_1:51628597-51628616 | None:intergenic | 30.0% |
| TAGTTTGGTCTATTAGCTAA+GGG | - | chr7_1:51628753-51628772 | Msa1023570:intron | 30.0% | |
| AAGTAAGTGGTTAACTCATT+CGG | + | chr7_1:51628782-51628801 | None:intergenic | 30.0% | |
| ! | TGCCAATTTTTATGTGAAGA+TGG | + | chr7_1:51628812-51628831 | None:intergenic | 30.0% |
| TAAAAATTGGCAAACCAGTA+AGG | - | chr7_1:51628820-51628839 | Msa1023570:intron | 30.0% | |
| GTTTACATTAATGCAAATCG+TGG | - | chr7_1:51628860-51628879 | Msa1023570:CDS | 30.0% | |
| !! | GTTTTTAAGCACTAATTGAG+TGG | + | chr7_1:51628889-51628908 | None:intergenic | 30.0% |
| CAATTAGTGCTTAAAAACAC+TGG | - | chr7_1:51628891-51628910 | Msa1023570:CDS | 30.0% | |
| AGCTAGTGTGAAATATATAG+AGG | - | chr7_1:51629131-51629150 | Msa1023570:CDS | 30.0% | |
| GACAGTTAATGTTGAGTAAA+TGG | - | chr7_1:51629153-51629172 | Msa1023570:CDS | 30.0% | |
| GAACATAGAAAAAGAAGAGT+TGG | - | chr7_1:51629189-51629208 | Msa1023570:CDS | 30.0% | |
| AAAAAGAAGAGTTGGAAGAA+AGG | - | chr7_1:51629197-51629216 | Msa1023570:CDS | 30.0% | |
| TTCACACCATGATTAAATTG+AGG | + | chr7_1:51629348-51629367 | None:intergenic | 30.0% | |
| !!! | TTTCTTCTTTTGGCTTATTC+AGG | + | chr7_1:51629458-51629477 | None:intergenic | 30.0% |
| TAGCAGTGCAATCTTTACAA+TGG | - | chr7_1:51627023-51627042 | Msa1023570:CDS | 35.0% | |
| TGCAAATCAATCAAGTGAAC+AGG | - | chr7_1:51627053-51627072 | Msa1023570:intron | 35.0% | |
| ! | AGTTAGCTTGAAAGTTATGG+TGG | - | chr7_1:51627083-51627102 | Msa1023570:intron | 35.0% |
| !! | AAGTTATGGTGGACAAAGTA+AGG | - | chr7_1:51627094-51627113 | Msa1023570:intron | 35.0% |
| GAAAAAAGTTGTGTATGCTG+AGG | - | chr7_1:51627116-51627135 | Msa1023570:intron | 35.0% | |
| AGTCTTGCAATAGTACCTAA+AGG | + | chr7_1:51627186-51627205 | None:intergenic | 35.0% | |
| ATCTAGATCACCAATATCTG+TGG | - | chr7_1:51627277-51627296 | Msa1023570:intron | 35.0% | |
| ! | AGCAAACGTAGACTTTTAAC+TGG | + | chr7_1:51627582-51627601 | None:intergenic | 35.0% |
| GAGAGAAAAACGCTACTTAT+CGG | - | chr7_1:51627636-51627655 | Msa1023570:intron | 35.0% | |
| AAACCAACATATGCTGATGT+GGG | - | chr7_1:51627823-51627842 | Msa1023570:intron | 35.0% | |
| ! | GGTAAGATTGGTATTGGAAA+GGG | - | chr7_1:51627862-51627881 | Msa1023570:intron | 35.0% |
| ! | TATAGCTGACGAAGATTTTG+CGG | - | chr7_1:51627960-51627979 | Msa1023570:CDS | 35.0% |
| !! | AGTTTTCTCACTTTTCCTCT+GGG | - | chr7_1:51627994-51628013 | Msa1023570:intron | 35.0% |
| ! | CCTCGAATTTTTCCTACATT+GGG | - | chr7_1:51628144-51628163 | Msa1023570:CDS | 35.0% |
| ! | TTTTTCCTACATTGGGAGTA+AGG | - | chr7_1:51628151-51628170 | Msa1023570:CDS | 35.0% |
| TGATCCTAAATCCTCTCTTT+CGG | - | chr7_1:51628242-51628261 | Msa1023570:CDS | 35.0% | |
| ACACTATCAAATGATGACAC+TGG | + | chr7_1:51628324-51628343 | None:intergenic | 35.0% | |
| GAGGAAATTGTCGTTGATAT+TGG | - | chr7_1:51628384-51628403 | Msa1023570:CDS | 35.0% | |
| ATTAGTCAAAGCAGATGTTG+AGG | + | chr7_1:51628538-51628557 | None:intergenic | 35.0% | |
| TCAACATCTGCTTTGACTAA+TGG | - | chr7_1:51628537-51628556 | Msa1023570:CDS | 35.0% | |
| CATACTACTACTAATTGGAC+AGG | + | chr7_1:51628733-51628752 | None:intergenic | 35.0% | |
| GTAGTTTGGTCTATTAGCTA+AGG | - | chr7_1:51628752-51628771 | Msa1023570:intron | 35.0% | |
| AGTTTGGTCTATTAGCTAAG+GGG | - | chr7_1:51628754-51628773 | Msa1023570:intron | 35.0% | |
| AGATGGTAGTAGTAAGTAAG+TGG | + | chr7_1:51628795-51628814 | None:intergenic | 35.0% | |
| TGGTTAATTCTGATCCTTAC+TGG | + | chr7_1:51628837-51628856 | None:intergenic | 35.0% | |
| GAAACAAGTCACCATGATTA+AGG | + | chr7_1:51629261-51629280 | None:intergenic | 35.0% | |
| GTGCAACCTCAATTTAATCA+TGG | - | chr7_1:51629339-51629358 | Msa1023570:CDS | 35.0% | |
| GACGACAAATTAGACAGAAT+AGG | + | chr7_1:51629401-51629420 | None:intergenic | 35.0% | |
| TATTGCAAGACTCGTTGCTA+AGG | - | chr7_1:51627194-51627213 | Msa1023570:intron | 40.0% | |
| TCTGTGGTCAAAGATTTGCA+AGG | - | chr7_1:51627293-51627312 | Msa1023570:intron | 40.0% | |
| TAACCTTCCATTGAGTTCCT+TGG | + | chr7_1:51627333-51627352 | None:intergenic | 40.0% | |
| CAATATTCAGCTTGAGCTTG+TGG | + | chr7_1:51627359-51627378 | None:intergenic | 40.0% | |
| ! | TGAATATTGATGACACACCG+AGG | - | chr7_1:51627370-51627389 | Msa1023570:intron | 40.0% |
| !! | TGGAATCAGAAGTGTCTTTG+TGG | - | chr7_1:51627438-51627457 | Msa1023570:intron | 40.0% |
| !! | ATCAGAAGTGTCTTTGTGGA+CGG | - | chr7_1:51627442-51627461 | Msa1023570:intron | 40.0% |
| CAAGAAACAAATCTCTCGGA+CGG | + | chr7_1:51627488-51627507 | None:intergenic | 40.0% | |
| GATCATTAGGGATCACACAA+AGG | + | chr7_1:51627560-51627579 | None:intergenic | 40.0% | |
| CTACGTTTGCTTCAGATGAA+TGG | - | chr7_1:51627591-51627610 | Msa1023570:intron | 40.0% | |
| GAAACCAACATATGCTGATG+TGG | - | chr7_1:51627822-51627841 | Msa1023570:intron | 40.0% | |
| CAATCTGAAGAGGGTAAGAT+TGG | - | chr7_1:51627850-51627869 | Msa1023570:intron | 40.0% | |
| GAAGAGGGTAAGATTGGTAT+TGG | - | chr7_1:51627856-51627875 | Msa1023570:intron | 40.0% | |
| ! | GGGTAAGATTGGTATTGGAA+AGG | - | chr7_1:51627861-51627880 | Msa1023570:intron | 40.0% |
| ATCAGCTTATCCTCTTCAGA+TGG | + | chr7_1:51627892-51627911 | None:intergenic | 40.0% | |
| TCCACTCGAAACATTCTGTT+TGG | - | chr7_1:51627937-51627956 | Msa1023570:CDS | 40.0% | |
| ACCAAACAGAATGTTTCGAG+TGG | + | chr7_1:51627941-51627960 | None:intergenic | 40.0% | |
| !! | CAGTTTTCTCACTTTTCCTC+TGG | - | chr7_1:51627993-51628012 | Msa1023570:intron | 40.0% |
| ! | GCCTCGAATTTTTCCTACAT+TGG | - | chr7_1:51628143-51628162 | Msa1023570:CDS | 40.0% |
| CCCAATGTAGGAAAAATTCG+AGG | + | chr7_1:51628147-51628166 | None:intergenic | 40.0% | |
| !!! | GTAAACGCAGCTGTTTTGAT+TGG | + | chr7_1:51628189-51628208 | None:intergenic | 40.0% |
| GATCCTAAATCCTCTCTTTC+GGG | - | chr7_1:51628243-51628262 | Msa1023570:CDS | 40.0% | |
| TGTCGTTGATATTGGAGTGA+AGG | - | chr7_1:51628392-51628411 | Msa1023570:CDS | 40.0% | |
| TATTGGAGTGAAGGAGGTAA+AGG | - | chr7_1:51628401-51628420 | Msa1023570:CDS | 40.0% | |
| ATTGGAGTGAAGGAGGTAAA+GGG | - | chr7_1:51628402-51628421 | Msa1023570:CDS | 40.0% | |
| AATGGCCTCAAACAGTACAT+AGG | - | chr7_1:51628555-51628574 | Msa1023570:CDS | 40.0% | |
| ACTCACCTATGTACTGTTTG+AGG | + | chr7_1:51628563-51628582 | None:intergenic | 40.0% | |
| CACATAGGATCATCTGTCAA+AGG | + | chr7_1:51629432-51629451 | None:intergenic | 40.0% | |
| AAAGTTGTGTATGCTGAGGC+TGG | - | chr7_1:51627120-51627139 | Msa1023570:intron | 45.0% | |
| AGGAAATGCTACAGCAACCA+AGG | - | chr7_1:51627313-51627332 | Msa1023570:intron | 45.0% | |
| ACAGCAACCAAGGAACTCAA+TGG | - | chr7_1:51627323-51627342 | Msa1023570:intron | 45.0% | |
| CAACCAAGGAACTCAATGGA+AGG | - | chr7_1:51627327-51627346 | Msa1023570:intron | 45.0% | |
| GTGTCTTTGTGGACGGTTTA+CGG | - | chr7_1:51627449-51627468 | Msa1023570:intron | 45.0% | |
| AACGCTACTTATCGGCAAGA+AGG | - | chr7_1:51627644-51627663 | Msa1023570:intron | 45.0% | |
| AAGCCCACATCAGCATATGT+TGG | + | chr7_1:51627829-51627848 | None:intergenic | 45.0% | |
| TGTGGGCTTACAATCTGAAG+AGG | - | chr7_1:51627840-51627859 | Msa1023570:intron | 45.0% | |
| GTGGGCTTACAATCTGAAGA+GGG | - | chr7_1:51627841-51627860 | Msa1023570:intron | 45.0% | |
| AAAGGGCTTACCATCTGAAG+AGG | - | chr7_1:51627879-51627898 | Msa1023570:intron | 45.0% | |
| GCTGATGCTGATGAAACTAC+TGG | - | chr7_1:51627906-51627925 | Msa1023570:intron | 45.0% | |
| !! | TTTCTCACTTTTCCTCTGGG+AGG | - | chr7_1:51627997-51628016 | Msa1023570:intron | 45.0% |
| !! | GGAGTGTTGCAAATGCTAGA+AGG | - | chr7_1:51628018-51628037 | Msa1023570:intron | 45.0% |
| TGAGTCCTGAGAGATGTTTG+CGG | - | chr7_1:51628091-51628110 | Msa1023570:CDS | 45.0% | |
| TGGTTCCTTACTCCCAATGT+AGG | + | chr7_1:51628159-51628178 | None:intergenic | 45.0% | |
| GCTGCGTTTACTCACAAATC+AGG | - | chr7_1:51628198-51628217 | Msa1023570:CDS | 45.0% | |
| GGTCCCTCTAAATGACATAG+AGG | - | chr7_1:51628365-51628384 | Msa1023570:CDS | 45.0% | |
| CGTTGATATTGGAGTGAAGG+AGG | - | chr7_1:51628395-51628414 | Msa1023570:CDS | 45.0% | |
| !! | GGCTTATTCAGGTTGCACAT+AGG | + | chr7_1:51629447-51629466 | None:intergenic | 45.0% |
| GCTACTTATCGGCAAGAAGG+AGG | - | chr7_1:51627647-51627666 | Msa1023570:intron | 50.0% | |
| !! | CAGAGGAGTTTTCGAGAGCA+AGG | + | chr7_1:51627782-51627801 | None:intergenic | 50.0% |
| ATTTGCAACACTCCTCCCAG+AGG | + | chr7_1:51628012-51628031 | None:intergenic | 50.0% | |
| TCTGACCGCAAACATCTCTC+AGG | + | chr7_1:51628099-51628118 | None:intergenic | 50.0% | |
| CCTCCCGAAAGAGAGGATTT+AGG | + | chr7_1:51628249-51628268 | None:intergenic | 50.0% | |
| CCTAAATCCTCTCTTTCGGG+AGG | - | chr7_1:51628246-51628265 | Msa1023570:CDS | 50.0% | |
| TGCAAATCCTCCCGAAAGAG+AGG | + | chr7_1:51628256-51628275 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 51627018 | 51629482 | 51627018 | ID=Msa1023570;Name=Msa1023570 |
| chr7_1 | mRNA | 51627018 | 51629482 | 51627018 | ID=Msa1023570-mRNA-1;Parent=Msa1023570;Name=Msa1023570-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.33|0|1|1|1|4|0|474 |
| chr7_1 | exon | 51628832 | 51629482 | 51628832 | ID=Msa1023570-mRNA-1:exon:10156;Parent=Msa1023570-mRNA-1 |
| chr7_1 | exon | 51628084 | 51628743 | 51628084 | ID=Msa1023570-mRNA-1:exon:10155;Parent=Msa1023570-mRNA-1 |
| chr7_1 | exon | 51627924 | 51627993 | 51627924 | ID=Msa1023570-mRNA-1:exon:10154;Parent=Msa1023570-mRNA-1 |
| chr7_1 | exon | 51627018 | 51627061 | 51627018 | ID=Msa1023570-mRNA-1:exon:10153;Parent=Msa1023570-mRNA-1 |
| chr7_1 | CDS | 51628832 | 51629482 | 51628832 | ID=Msa1023570-mRNA-1:cds;Parent=Msa1023570-mRNA-1 |
| chr7_1 | CDS | 51628084 | 51628743 | 51628084 | ID=Msa1023570-mRNA-1:cds;Parent=Msa1023570-mRNA-1 |
| chr7_1 | CDS | 51627924 | 51627993 | 51627924 | ID=Msa1023570-mRNA-1:cds;Parent=Msa1023570-mRNA-1 |
| chr7_1 | CDS | 51627018 | 51627061 | 51627018 | ID=Msa1023570-mRNA-1:cds;Parent=Msa1023570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
