AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0502340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502340 MtrunA17_Chr3g0112511 63.913 920 309 8 1 904 1 913 0.0 1097
Msa0502340 MtrunA17_Chr3g0101321 61.039 924 334 8 1 904 1 918 0.0 1066
Msa0502340 MtrunA17_Chr3g0101331 59.539 912 336 11 1 881 1 910 0.0 1026
Msa0502340 MtrunA17_Chr3g0100961 59.584 913 341 10 1 894 1 904 0.0 1008
Msa0502340 MtrunA17_Chr1g0189351 59.448 905 330 12 1 875 1 898 0.0 1008
Msa0502340 MtrunA17_Chr3g0100831 57.374 929 365 12 1 908 1 919 0.0 980
Msa0502340 MtrunA17_Chr3g0100971 62.993 735 261 5 1 725 1 734 0.0 896
Msa0502340 MtrunA17_Chr3g0100801 58.323 823 285 9 4 820 1 771 0.0 882
Msa0502340 MtrunA17_Chr3g0100851 59.044 774 295 5 104 872 1 757 0.0 860
Msa0502340 MtrunA17_Chr3g0101271 52.018 892 397 12 21 894 8 886 0.0 848
Msa0502340 MtrunA17_Chr3g0101241 52.018 892 397 12 21 894 8 886 0.0 847
Msa0502340 MtrunA17_Chr3g0100761 60.246 732 246 5 1 725 1 694 0.0 838
Msa0502340 MtrunA17_Chr3g0080741 47.318 932 446 12 1 894 1 925 0.0 805
Msa0502340 MtrunA17_Chr3g0101011 50.108 926 419 18 6 894 14 933 0.0 798
Msa0502340 MtrunA17_Chr3g0080771 48.276 928 436 13 1 892 1 920 0.0 788
Msa0502340 MtrunA17_Chr3g0080601 47.532 932 441 13 1 894 1 922 0.0 786
Msa0502340 MtrunA17_Chr3g0080791 48.328 927 437 13 1 892 1 920 0.0 786
Msa0502340 MtrunA17_Chr3g0101201 50.000 918 419 17 6 895 16 921 0.0 781
Msa0502340 MtrunA17_Chr3g0094301 47.961 932 438 13 1 894 1 923 0.0 781
Msa0502340 MtrunA17_Chr7g0229761 47.961 932 438 13 1 894 1 923 0.0 781
Msa0502340 MtrunA17_Chr1g0151481 47.481 933 441 16 1 894 1 923 0.0 769
Msa0502340 MtrunA17_Chr3g0080751 47.040 929 448 14 1 892 1 922 0.0 769
Msa0502340 MtrunA17_Chr3g0101231 49.558 906 421 17 6 884 14 910 0.0 764
Msa0502340 MtrunA17_Chr3g0101181 51.103 861 383 15 43 873 53 905 0.0 763
Msa0502340 MtrunA17_Chr3g0101221 49.026 924 429 16 5 894 7 922 0.0 756
Msa0502340 MtrunA17_Chr3g0080731 46.344 930 456 12 1 894 1 923 0.0 748
Msa0502340 MtrunA17_Chr3g0081211 46.013 928 461 11 1 894 1 922 0.0 726
Msa0502340 MtrunA17_Chr3g0101251 47.905 931 399 19 1 894 1 882 0.0 725
Msa0502340 MtrunA17_Chr3g0081341 45.269 930 465 13 1 894 66 987 0.0 716
Msa0502340 MtrunA17_Chr3g0100731 58.108 666 267 4 240 894 1 665 0.0 713
Msa0502340 MtrunA17_Chr3g0081391 43.978 930 478 11 1 894 1 923 0.0 711
Msa0502340 MtrunA17_Chr3g0080631 44.026 929 434 13 1 894 1 878 0.0 706
Msa0502340 MtrunA17_Chr3g0100681 61.945 586 214 5 181 761 1 582 0.0 688
Msa0502340 MtrunA17_Chr3g0081191 42.734 929 487 11 1 894 1 919 0.0 677
Msa0502340 MtrunA17_Chr3g0081361 43.054 943 482 13 1 898 1 933 0.0 677
Msa0502340 MtrunA17_Chr3g0081371 43.750 944 474 14 1 898 1 933 0.0 671
Msa0502340 MtrunA17_Chr3g0081181 42.873 926 478 13 1 894 1 907 0.0 629
Msa0502340 MtrunA17_Chr3g0101391 55.236 592 246 6 309 890 1 583 0.0 612
Msa0502340 MtrunA17_Chr5g0410001 38.859 929 508 24 1 892 1 906 0.0 565
Msa0502340 MtrunA17_Chr5g0410031 39.182 929 510 21 1 892 1 911 0.0 565
Msa0502340 MtrunA17_Chr3g0080721 47.015 670 323 7 255 903 5 663 0.0 560
Msa0502340 MtrunA17_Chr3g0100781 68.633 373 108 4 1 365 1 372 4.05e-177 517
Msa0502340 MtrunA17_Chr5g0409991 38.248 902 505 19 1 875 1 877 5.85e-171 522
Msa0502340 MtrunA17_Chr5g0410021 37.652 903 511 18 1 875 1 879 3.01e-170 520
Msa0502340 MtrunA17_Chr5g0409971 38.453 905 504 20 1 875 1 882 4.37e-168 514
Msa0502340 MtrunA17_Chr3g0084351 47.321 560 277 7 70 617 1 554 2.49e-159 479
Msa0502340 MtrunA17_Chr3g0080651 45.440 614 304 9 308 902 240 841 1.06e-148 461
Msa0502340 MtrunA17_Chr3g0080651 50.446 224 98 5 1 213 4 225 6.96e-54 202
Msa0502340 MtrunA17_Chr1g0189271 66.769 325 103 2 157 477 1 324 4.61e-147 438
Msa0502340 MtrunA17_Chr3g0100701 54.737 475 198 7 442 907 282 748 2.92e-140 436
Msa0502340 MtrunA17_Chr3g0100701 61.484 283 97 3 1 272 1 282 3.11e-104 340
Msa0502340 MtrunA17_Chr3g0101211 54.657 408 178 4 196 603 1 401 4.29e-140 423
Msa0502340 MtrunA17_Chr5g0444301 54.607 445 195 4 434 872 1 444 4.18e-132 404
Msa0502340 MtrunA17_Chr3g0100791 54.785 418 186 2 456 872 1 416 1.10e-130 400
Msa0502340 MtrunA17_Chr3g0100911 83.043 230 39 0 619 848 1 230 7.00e-123 372
Msa0502340 MtrunA17_Chr3g0101421 64.111 287 89 4 1 274 1 286 5.56e-116 356
Msa0502340 MtrunA17_Chr5g0404741 31.038 944 574 21 1 899 1 912 2.81e-115 375
Msa0502340 MtrunA17_Chr1g0189281 53.209 374 164 6 504 868 2 373 3.05e-109 342
Msa0502340 MtrunA17_Chr1g0149071 39.439 606 205 14 227 823 1 453 2.44e-105 334
Msa0502340 MtrunA17_Chr3g0101361 46.327 490 217 9 442 894 288 768 8.82e-104 340
Msa0502340 MtrunA17_Chr3g0101361 43.403 288 145 8 6 279 16 299 2.07e-59 217
Msa0502340 MtrunA17_Chr2g0299001 29.301 959 586 29 1 901 1 925 4.10e-103 342
Msa0502340 MtrunA17_Chr4g0037421 29.926 949 554 33 1 872 38 952 5.29e-92 313
Msa0502340 MtrunA17_Chr3g0100721 68.037 219 66 2 1 215 1 219 3.94e-91 288
Msa0502340 MtrunA17_Chr7g0219851 28.749 967 579 27 1 892 3 934 1.26e-87 300
Msa0502340 MtrunA17_Chr1g0189321 60.956 251 70 6 397 631 1 239 2.85e-86 276
Msa0502340 MtrunA17_Chr3g0096971 70.857 175 51 0 255 429 1 175 2.50e-83 265
Msa0502340 MtrunA17_Chr1g0197241 26.386 902 571 25 26 875 672 1532 1.72e-69 253
Msa0502340 MtrunA17_Chr5g0431051 26.205 954 558 37 1 885 1 877 7.09e-64 233
Msa0502340 MtrunA17_Chr5g0414311 27.273 913 564 34 1 858 1 868 1.08e-63 234
Msa0502340 MtrunA17_Chr5g0430721 27.081 901 560 34 1 854 42 892 5.42e-63 231
Msa0502340 MtrunA17_Chr1g0197201 25.847 944 565 29 15 875 453 1344 9.77e-63 231
Msa0502340 MtrunA17_Chr5g0430141 26.702 955 580 34 1 890 1 900 7.47e-62 228
Msa0502340 MtrunA17_Chr5g0415471 26.919 899 582 32 1 858 1 865 4.01e-60 223
Msa0502340 MtrunA17_Chr6g0467961 29.101 701 423 25 1 676 1 652 4.33e-60 221
Msa0502340 MtrunA17_Chr5g0414181 28.097 904 559 35 1 858 1 859 7.45e-60 221
Msa0502340 MtrunA17_Chr3g0101341 42.647 272 130 6 23 272 1 268 1.28e-59 204
Msa0502340 MtrunA17_Chr8g0352831 27.735 786 489 29 40 776 50 805 1.19e-58 219
Msa0502340 MtrunA17_Chr3g0086161 27.212 893 564 35 38 887 42 891 1.58e-58 218
Msa0502340 MtrunA17_Chr6g0468121 26.169 898 574 30 1 858 1 849 2.05e-58 218
Msa0502340 MtrunA17_Chr6g0468021 26.854 890 575 28 1 858 1 846 3.40e-58 217
Msa0502340 MtrunA17_Chr7g0248221 26.345 892 526 25 19 874 23 819 8.35e-58 214
Msa0502340 MtrunA17_Chr6g0470081 26.557 915 567 35 1 860 1 865 1.06e-57 216
Msa0502340 MtrunA17_Chr5g0430511 26.230 915 557 31 1 856 1 856 1.10e-57 215
Msa0502340 MtrunA17_Chr3g0086181 27.778 882 550 36 38 877 42 878 1.44e-57 213
Msa0502340 MtrunA17_Chr5g0429961 25.870 920 542 39 1 854 1 846 1.51e-57 214
Msa0502340 MtrunA17_Chr1g0155991 25.355 915 560 33 1 856 1 851 1.59e-57 214
Msa0502340 MtrunA17_Chr6g0468151 27.194 695 442 22 1 672 1 654 2.57e-57 214
Msa0502340 MtrunA17_Chr3g0090651 26.014 888 547 35 45 869 55 895 2.65e-57 214
Msa0502340 MtrunA17_Chr6g0468451 26.144 918 571 31 1 869 1 860 5.95e-57 213
Msa0502340 MtrunA17_Chr3g0085451 29.360 797 497 31 132 887 109 880 7.64e-57 213
Msa0502340 MtrunA17_Chr3g0089961 25.947 898 561 34 34 869 44 899 1.14e-56 211
Msa0502340 MtrunA17_Chr3g0123111 24.839 930 581 29 1 887 1 855 1.40e-56 212
Msa0502340 MtrunA17_Chr3g0080701 50.000 218 95 4 1 205 1 217 2.32e-56 194
Msa0502340 MtrunA17_Chr3g0086221 26.588 929 582 37 1 877 1 881 2.39e-56 211
Msa0502340 MtrunA17_Chr3g0091061 25.955 890 551 34 42 869 52 895 2.60e-56 212
Msa0502340 MtrunA17_Chr3g0085561 29.172 761 459 29 162 869 137 870 4.66e-56 210
Msa0502340 MtrunA17_Chr7g0244231 24.946 918 583 30 1 872 1 858 6.66e-56 209
Msa0502340 MtrunA17_Chr1g0189551 26.884 889 517 30 18 872 50 839 9.13e-56 208
Msa0502340 MtrunA17_Chr3g0085331 26.445 934 579 34 1 867 1 893 1.12e-55 209
Msa0502340 MtrunA17_Chr3g0113481 26.948 757 474 25 40 764 48 757 1.30e-55 206
Msa0502340 MtrunA17_Chr1g0155321 25.856 905 566 37 1 856 1 849 1.76e-55 208
Msa0502340 MtrunA17_Chr1g0164391 26.291 852 512 29 38 836 47 835 1.93e-55 209
Msa0502340 MtrunA17_Chr3g0084361 48.347 242 114 3 659 892 1 239 2.29e-55 192
Msa0502340 MtrunA17_Chr3g0087581 27.672 889 566 33 38 887 42 892 2.95e-55 208
Msa0502340 MtrunA17_Chr3g0091081 26.143 853 532 33 31 829 41 849 7.50e-55 207
Msa0502340 MtrunA17_Chr3g0086151 27.294 872 552 34 38 869 42 871 7.52e-55 205
Msa0502340 MtrunA17_Chr3g0089211 25.876 885 562 32 40 869 97 942 1.96e-54 206
Msa0502340 MtrunA17_Chr3g0089251 26.043 887 559 33 40 869 79 925 2.25e-54 206
Msa0502340 MtrunA17_Chr4g0027251 25.162 926 582 36 1 872 1 869 2.35e-54 205
Msa0502340 MtrunA17_Chr3g0085501 27.244 947 571 39 1 878 1 898 2.47e-54 205
Msa0502340 MtrunA17_Chr5g0430641 26.055 948 550 37 1 871 1 874 2.90e-54 204
Msa0502340 MtrunA17_Chr3g0092241 26.816 895 554 33 34 869 44 896 4.22e-54 204
Msa0502340 MtrunA17_Chr5g0430621 26.286 894 533 32 1 834 1 828 8.15e-54 203
Msa0502340 MtrunA17_Chr2g0309721 24.860 893 571 32 34 869 44 893 8.20e-54 204
Msa0502340 MtrunA17_Chr3g0089421 26.135 903 552 33 34 869 44 898 8.24e-54 204
Msa0502340 MtrunA17_Chr3g0113791 26.057 875 556 31 40 871 48 874 1.01e-53 203
Msa0502340 MtrunA17_Chr3g0089761 25.542 877 561 29 47 869 57 895 1.10e-53 203
Msa0502340 MtrunA17_Chr3g0089651 25.644 932 581 35 33 896 43 930 1.82e-53 203
Msa0502340 MtrunA17_Chr5g0430291 24.723 902 583 30 1 854 1 854 3.36e-53 201
Msa0502340 MtrunA17_Chr3g0085651 26.362 918 588 33 1 869 1 879 3.90e-53 202
Msa0502340 MtrunA17_Chr3g0085801 27.519 923 549 38 1 869 1 857 1.14e-52 200
Msa0502340 MtrunA17_Chr3g0085471 27.438 882 553 37 33 869 41 880 1.19e-52 200
Msa0502340 MtrunA17_Chr5g0414201 26.623 909 568 35 1 858 1 861 2.21e-52 198
Msa0502340 MtrunA17_Chr3g0090141 25.194 901 542 35 41 867 51 893 2.39e-52 199
Msa0502340 MtrunA17_Chr3g0082131 26.451 896 547 38 42 869 50 901 4.53e-52 198
Msa0502340 MtrunA17_Chr6g0468101 25.717 906 554 34 1 872 1 821 7.03e-52 197
Msa0502340 MtrunA17_Chr5g0430581 25.304 905 562 33 1 854 1 842 7.14e-52 197
Msa0502340 MtrunA17_Chr3g0090691 25.618 890 553 33 42 869 52 894 9.71e-52 197
Msa0502340 MtrunA17_Chr6g0470011 25.304 905 591 34 1 860 1 865 1.30e-51 197
Msa0502340 MtrunA17_Chr5g0429951 25.972 797 499 25 1 760 1 743 1.86e-51 196
Msa0502340 MtrunA17_Chr3g0089591 26.268 887 531 34 36 857 42 870 2.26e-51 196
Msa0502340 MtrunA17_Chr3g0087701 26.936 891 558 34 25 869 32 875 2.34e-51 196
Msa0502340 MtrunA17_Chr5g0430951 24.742 970 560 38 1 894 1 876 2.92e-51 194
Msa0502340 MtrunA17_Chr3g0082391 26.580 696 430 26 40 696 49 702 3.78e-51 193
Msa0502340 MtrunA17_Chr6g0468271 26.515 660 437 19 1 650 1 622 3.78e-51 195
Msa0502340 MtrunA17_Chr3g0092261 26.092 916 541 35 30 869 85 940 3.86e-51 196
Msa0502340 MtrunA17_Chr3g0082871 25.997 727 445 24 10 697 9 681 4.60e-51 192
Msa0502340 MtrunA17_Chr2g0316291 25.739 913 587 32 4 859 9 887 5.00e-51 195
Msa0502340 MtrunA17_Chr3g0089781 26.362 918 529 39 34 869 44 896 5.67e-51 194
Msa0502340 MtrunA17_Chr8g0346831 25.387 969 581 40 4 872 9 935 5.67e-51 194
Msa0502340 MtrunA17_Chr3g0082101 27.273 715 418 29 42 727 52 693 6.63e-51 194
Msa0502340 MtrunA17_Chr1g0169901 27.484 775 484 31 38 775 47 780 8.74e-51 194
Msa0502340 MtrunA17_Chr3g0089601 25.718 871 563 28 34 854 42 878 9.92e-51 193
Msa0502340 MtrunA17_Chr4g0051651 27.121 660 420 21 10 628 32 671 1.13e-50 190
Msa0502340 MtrunA17_Chr2g0282991 25.341 880 549 33 34 855 44 873 1.49e-50 194
Msa0502340 MtrunA17_Chr5g0433771 26.444 900 540 30 10 874 14 826 1.79e-50 192
Msa0502340 MtrunA17_Chr5g0430441 26.366 732 470 23 1 705 1 690 2.99e-50 192
Msa0502340 MtrunA17_Chr3g0089501 25.870 862 554 29 34 846 42 867 4.63e-50 191
Msa0502340 MtrunA17_Chr3g0084031 26.621 879 528 37 63 878 69 893 4.79e-50 192
Msa0502340 MtrunA17_Chr3g0090431 27.524 723 438 29 184 854 63 751 8.20e-50 191
Msa0502340 MtrunA17_Chr3g0090371 24.579 891 559 33 41 867 51 892 9.88e-50 191
Msa0502340 MtrunA17_Chr8g0352861 26.281 898 554 37 38 869 48 903 1.11e-49 191
Msa0502340 MtrunA17_Chr3g0089991 25.197 889 582 28 33 869 43 900 1.36e-49 191
Msa0502340 MtrunA17_Chr3g0085931 25.727 894 579 31 1 854 1 849 1.73e-49 190
Msa0502340 MtrunA17_Chr8g0348931 25.954 917 565 36 20 869 33 902 4.93e-49 189
Msa0502340 MtrunA17_Chr3g0089541 25.028 899 570 32 33 869 43 899 5.50e-49 189
Msa0502340 MtrunA17_Chr3g0082311 26.002 923 539 39 38 882 47 903 6.25e-49 188
Msa0502340 MtrunA17_Chr3g0089871 27.620 706 429 28 31 697 41 703 6.52e-49 189
Msa0502340 MtrunA17_Chr3g0090401 24.746 885 546 34 41 867 262 1084 2.13e-48 187
Msa0502340 MtrunA17_Chr3g0086621 26.256 876 556 34 38 869 42 871 2.34e-48 187
Msa0502340 MtrunA17_Chr4g0010261 30.151 597 347 23 201 760 200 763 2.48e-48 186
Msa0502340 MtrunA17_Chr3g0089471 25.650 885 542 32 31 857 41 867 2.89e-48 187
Msa0502340 MtrunA17_Chr8g0337891 27.177 666 435 21 4 650 9 643 4.55e-48 183
Msa0502340 MtrunA17_Chr6g0468331 26.957 690 441 25 1 672 1 645 4.95e-48 183
Msa0502340 MtrunA17_Chr7g0257541 25.813 922 538 34 3 874 10 835 5.77e-48 184
Msa0502340 MtrunA17_Chr3g0082891 24.825 858 532 32 1 797 1 806 8.74e-48 184
Msa0502340 MtrunA17_Chr3g0082351 26.065 798 484 27 34 776 43 789 8.83e-48 185
Msa0502340 MtrunA17_Chr5g0446611 26.846 853 517 37 34 827 44 848 9.73e-48 184
Msa0502340 MtrunA17_Chr8g0355411 24.040 911 556 28 1 876 7 816 9.81e-48 183
Msa0502340 MtrunA17_Chr1g0164611 26.000 700 408 25 42 672 52 710 1.28e-47 184
Msa0502340 MtrunA17_Chr6g0467911 25.292 771 473 25 1 742 1 697 1.44e-47 182
Msa0502340 MtrunA17_Chr3g0087841 24.432 880 519 32 41 853 51 851 1.82e-47 184
Msa0502340 MtrunA17_Chr2g0299091 26.462 718 435 25 24 690 1 676 1.90e-47 183
Msa0502340 MtrunA17_Chr1g0189301 60.294 136 44 2 65 193 1 133 2.28e-47 165
Msa0502340 MtrunA17_Chr6g0475491 25.332 754 490 26 4 724 9 722 2.92e-47 182
Msa0502340 MtrunA17_Chr7g0248531 26.431 734 421 29 15 705 12 669 3.02e-47 182
Msa0502340 MtrunA17_Chr3g0089911 26.628 691 423 22 30 695 40 671 4.21e-47 179
Msa0502340 MtrunA17_Chr3g0081841 46.047 215 105 4 157 366 1 209 4.22e-47 176
Msa0502340 MtrunA17_Chr3g0081841 40.000 155 92 1 430 583 189 343 2.51e-22 101
Msa0502340 MtrunA17_Chr3g0081841 40.566 106 61 1 698 803 384 487 6.99e-15 78.6
Msa0502340 MtrunA17_Chr3g0082811 24.912 855 528 32 1 802 1 794 5.10e-47 181
Msa0502340 MtrunA17_Chr3g0087541 27.510 767 494 27 162 887 168 913 5.21e-47 182
Msa0502340 MtrunA17_Chr8g0338621 25.224 670 439 22 4 649 9 640 5.65e-47 179
Msa0502340 MtrunA17_Chr7g0221481 26.328 847 524 33 38 823 42 849 6.36e-47 181
Msa0502340 MtrunA17_Chr3g0082881 25.495 859 536 30 1 799 1 815 7.49e-47 181
Msa0502340 MtrunA17_Chr4g0010201 29.215 599 369 23 161 727 156 731 8.48e-47 182
Msa0502340 MtrunA17_Chr1g0164631 27.378 694 430 29 42 697 51 708 1.73e-46 180
Msa0502340 MtrunA17_Chr4g0025391 24.650 929 537 36 30 869 40 894 2.15e-46 181
Msa0502340 MtrunA17_Chr1g0164581 26.131 884 541 35 42 869 50 877 2.86e-46 180
Msa0502340 MtrunA17_Chr4g0009781 29.693 522 321 20 200 697 199 698 4.97e-46 179
Msa0502340 MtrunA17_Chr2g0299151 26.531 735 454 27 34 732 43 727 5.66e-46 179
Msa0502340 MtrunA17_Chr6g0471941 26.409 674 427 21 4 649 9 641 1.13e-45 177
Msa0502340 MtrunA17_Chr3g0101401 49.730 185 79 4 85 256 1 184 1.31e-45 162
Msa0502340 MtrunA17_Chr8g0338261 24.731 930 584 37 19 890 23 894 1.46e-45 177
Msa0502340 MtrunA17_Chr2g0299101 26.136 704 428 26 38 690 40 702 1.54e-45 177
Msa0502340 MtrunA17_Chr1g0169951 27.701 722 417 28 6 674 18 687 1.68e-45 176
Msa0502340 MtrunA17_Chr6g0456131 25.906 911 558 34 26 869 29 889 2.25e-45 177
Msa0502340 MtrunA17_Chr3g0089811 26.488 672 398 23 34 649 44 675 2.89e-45 177
Msa0502340 MtrunA17_Chr3g0087731 28.191 713 432 25 200 882 2 664 3.25e-45 176
Msa0502340 MtrunA17_Chr7g0257221 25.539 928 530 34 3 872 8 832 6.83e-45 175
Msa0502340 MtrunA17_Chr3g0082791 28.476 748 456 29 174 880 180 889 7.43e-45 175
Msa0502340 MtrunA17_Chr6g0468341 28.221 489 319 14 1 482 1 464 1.68e-44 174
Msa0502340 MtrunA17_Chr3g0086091 29.041 730 448 32 200 887 2 703 2.25e-44 174
Msa0502340 MtrunA17_Chr5g0413811 28.277 679 418 22 223 872 1 639 4.51e-44 170
Msa0502340 MtrunA17_Chr2g0299121 25.249 903 560 36 38 869 40 898 4.81e-44 173
Msa0502340 MtrunA17_Chr6g0470021 26.891 714 462 26 186 863 69 758 6.88e-44 172
Msa0502340 MtrunA17_Chr3g0113781 27.062 691 444 25 217 871 3 669 7.11e-44 171
Msa0502340 MtrunA17_Chr8g0344071 27.175 747 471 20 167 883 449 1152 7.46e-44 172
Msa0502340 MtrunA17_Chr7g0218941 26.205 664 439 22 4 649 9 639 9.75e-44 172
Msa0502340 MtrunA17_Chr4g0010221 29.648 597 366 24 161 726 156 729 1.81e-43 171
Msa0502340 MtrunA17_Chr7g0257201 25.028 903 554 33 3 854 8 838 1.83e-43 170
Msa0502340 MtrunA17_Chr3g0086741 26.435 836 492 31 38 799 42 828 2.00e-43 170
Msa0502340 MtrunA17_Chr4g0020501 25.913 849 465 31 38 855 3 718 2.02e-43 170
Msa0502340 MtrunA17_Chr3g0101351 41.071 224 121 4 6 221 18 238 2.06e-43 159
Msa0502340 MtrunA17_Chr8g0338391 26.152 673 437 23 4 653 9 644 2.84e-43 170
Msa0502340 MtrunA17_Chr3g0081201 41.784 213 113 2 695 898 2 212 1.00e-42 155
Msa0502340 MtrunA17_Chr5g0414231 26.527 524 337 14 1 504 1 496 1.19e-42 163
Msa0502340 MtrunA17_Chr3g0084051 25.461 868 530 30 63 893 67 854 1.38e-42 168
Msa0502340 MtrunA17_Chr5g0415511 24.784 694 448 20 1 672 1 642 2.47e-42 166
Msa0502340 MtrunA17_Chr7g0257191 25.943 848 504 34 19 801 23 811 2.85e-42 166
Msa0502340 MtrunA17_Chr3g0100841 68.571 105 32 1 1 104 1 105 3.40e-42 149
Msa0502340 MtrunA17_Chr3g0085131 25.775 935 578 38 1 877 1 877 4.26e-42 167
Msa0502340 MtrunA17_Chr4g0010251 30.426 516 318 22 201 697 200 693 7.00e-42 166
Msa0502340 MtrunA17_Chr3g0085111 25.055 906 586 34 38 896 43 902 8.87e-42 166
Msa0502340 MtrunA17_Chr3g0083621 25.366 887 556 35 33 856 46 889 1.09e-41 166
Msa0502340 MtrunA17_Chr4g0008461 27.923 727 440 29 190 856 159 861 1.13e-41 166
Msa0502340 MtrunA17_Chr3g0084971 26.217 904 539 36 34 871 44 885 1.47e-41 165
Msa0502340 MtrunA17_Chr3g0085751 25.336 892 567 36 38 877 39 883 2.46e-41 164
Msa0502340 MtrunA17_Chr8g0351821 28.172 465 299 15 1 456 1 439 3.38e-41 158
Msa0502340 MtrunA17_Chr7g0248431 28.425 489 300 15 19 482 23 486 6.88e-41 159
Msa0502340 MtrunA17_Chr6g0456121 26.761 781 463 38 162 875 149 887 2.27e-40 161
Msa0502340 MtrunA17_Chr3g0084081 27.609 757 494 27 162 887 168 901 4.01e-40 160
Msa0502340 MtrunA17_Chr3g0085551 25.399 689 450 27 124 775 7 668 7.22e-40 158
Msa0502340 MtrunA17_Chr3g0085161 24.301 823 490 31 157 910 23 781 3.45e-39 157
Msa0502340 MtrunA17_Chr5g0414291 27.934 426 270 13 1 408 1 407 3.85e-39 150
Msa0502340 MtrunA17_Chr1g0189261 73.626 91 24 0 1 91 1 91 8.55e-39 139
Msa0502340 MtrunA17_Chr3g0085521 24.345 916 545 37 38 869 42 893 3.33e-38 154
Msa0502340 MtrunA17_Chr3g0091011 24.236 949 602 36 1 896 1 885 6.51e-38 153
Msa0502340 MtrunA17_Chr8g0338671 27.237 503 345 14 156 649 39 529 1.15e-37 150
Msa0502340 MtrunA17_Chr3g0091041 33.742 326 172 13 190 506 197 487 1.21e-37 149
Msa0502340 MtrunA17_Chr5g0430331 27.409 467 282 17 1 448 1 429 2.48e-37 145
Msa0502340 MtrunA17_Chr3g0089931 31.818 330 192 10 190 504 175 486 4.85e-37 147
Msa0502340 MtrunA17_Chr3g0078361 26.915 457 278 17 196 616 1 437 5.94e-37 145
Msa0502340 MtrunA17_Chr1g0147141 25.785 764 493 27 158 871 157 896 6.11e-37 150
Msa0502340 MtrunA17_Chr5g0417301 25.736 645 381 22 14 641 13 576 3.34e-36 145
Msa0502340 MtrunA17_Chr3g0083751 25.162 771 448 28 184 869 174 900 3.57e-36 148
Msa0502340 MtrunA17_Chr6g0484551 24.965 709 409 27 34 697 44 674 4.69e-36 147
Msa0502340 MtrunA17_Chr4g0071021 24.740 481 300 16 1 465 1 435 1.12e-35 141
Msa0502340 MtrunA17_Chr3g0085091 24.458 969 627 37 1 910 1 923 1.47e-35 146
Msa0502340 MtrunA17_Chr8g0338251 24.771 654 425 23 1 629 1 612 1.92e-35 144
Msa0502340 MtrunA17_Chr6g0469991 28.535 389 249 13 1 381 1 368 2.55e-35 138
Msa0502340 MtrunA17_Chr8g0356251 27.951 576 357 22 190 727 202 757 2.93e-35 145
Msa0502340 MtrunA17_Chr1g0159111 26.437 609 353 23 190 742 174 743 3.20e-35 144
Msa0502340 MtrunA17_Chr5g0415551 27.099 679 420 28 162 794 27 676 5.85e-35 143
Msa0502340 MtrunA17_Chr3g0089431 27.293 458 265 16 36 461 42 463 7.17e-35 139
Msa0502340 MtrunA17_Chr8g0352211 25.846 650 419 22 26 649 1030 1642 9.11e-35 144
Msa0502340 MtrunA17_Chr3g0101171 63.918 97 35 0 423 519 5 101 9.54e-35 128
Msa0502340 MtrunA17_Chr1g0197181 27.342 523 288 16 425 875 3 505 4.32e-34 138
Msa0502340 MtrunA17_Chr3g0085171 24.793 726 480 26 27 726 24 709 5.05e-34 141
Msa0502340 MtrunA17_Chr3g0087301 27.317 410 253 13 1 390 1 385 1.01e-33 140
Msa0502340 MtrunA17_Chr2g0309151 27.331 472 304 17 223 672 1 455 1.93e-33 135
Msa0502340 MtrunA17_Chr5g0430901 27.094 406 254 12 1 390 1 380 3.62e-33 138
Msa0502340 MtrunA17_Chr5g0417251 26.202 645 415 25 248 858 12 629 7.88e-33 135
Msa0502340 MtrunA17_Chr3g0080871 25.503 796 497 32 163 890 155 922 1.37e-32 137
Msa0502340 MtrunA17_Chr3g0083721 24.680 782 456 34 147 856 101 821 2.53e-32 135
Msa0502340 MtrunA17_Chr8g0338361 25.156 481 340 13 156 628 21 489 5.61e-32 131
Msa0502340 MtrunA17_Chr4g0048471 27.193 456 288 16 190 614 48 490 1.96e-31 132
Msa0502340 MtrunA17_Chr6g0478721 24.620 723 454 24 190 858 91 776 4.72e-31 131
Msa0502340 MtrunA17_Chr3g0084061 25.906 745 488 27 184 887 183 904 6.40e-31 131
Msa0502340 MtrunA17_Chr4g0048421 23.538 718 465 20 190 858 173 855 4.89e-30 128
Msa0502340 MtrunA17_Chr3g0084811 23.412 850 550 31 63 856 224 1028 1.15e-28 124
Msa0502340 MtrunA17_Chr7g0257551 28.861 395 234 13 104 472 37 410 2.13e-28 119
Msa0502340 MtrunA17_Chr6g0468401 26.685 356 229 12 1 346 1 334 3.49e-28 116
Msa0502340 MtrunA17_Chr2g0299141 28.109 402 224 14 322 674 33 418 4.77e-27 115
Msa0502340 MtrunA17_Chr3g0101411 66.667 78 26 0 1 78 1 78 9.37e-27 104
Msa0502340 MtrunA17_Chr1g0168901 28.978 597 337 27 190 763 171 703 1.22e-26 117
Msa0502340 MtrunA17_Chr7g0248411 28.097 331 201 11 72 380 5 320 1.61e-26 111
Msa0502340 MtrunA17_Chr8g0338861 24.812 665 405 21 300 896 7 644 1.76e-26 116
Msa0502340 MtrunA17_Chr1g0189341 46.970 132 51 3 791 919 1 116 3.17e-26 104
Msa0502340 MtrunA17_Chr3g0082321 25.568 528 307 21 321 801 271 759 3.89e-26 115
Msa0502340 MtrunA17_Chr3g0091971 24.592 736 400 29 190 852 173 826 4.17e-26 115
Msa0502340 MtrunA17_Chr3g0101161 44.670 197 86 5 710 894 3 188 5.49e-26 106
Msa0502340 MtrunA17_Chr8g0355071 33.632 223 139 6 263 482 77 293 1.79e-25 107
Msa0502340 MtrunA17_Chr1g0189331 55.455 110 46 2 666 773 1 109 3.07e-25 101
Msa0502340 MtrunA17_Chr1g0197191 28.274 336 205 10 60 384 18 328 4.55e-25 107
Msa0502340 MtrunA17_Chr6g0468111 25.545 505 287 15 185 676 68 496 1.50e-24 108
Msa0502340 MtrunA17_Chr3g0086071 26.531 490 321 17 410 869 11 491 1.54e-24 109
Msa0502340 MtrunA17_Chr3g0083591 26.173 554 324 21 184 697 155 663 2.04e-24 110
Msa0502340 MtrunA17_Chr5g0444291 52.222 90 23 1 278 347 8 97 4.51e-24 97.4
Msa0502340 MtrunA17_Chr5g0439121 24.374 878 536 39 38 880 43 827 7.13e-24 108
Msa0502340 MtrunA17_Chr5g0410481 23.398 671 432 22 249 858 200 849 8.92e-24 108
Msa0502340 MtrunA17_Chr1g0189311 64.198 81 24 3 196 272 1 80 1.38e-23 95.5
Msa0502340 MtrunA17_Chr3g0107181 23.009 678 437 20 27 676 21 641 7.92e-23 105
Msa0502340 MtrunA17_Chr2g0299131 33.628 226 135 8 164 381 2 220 8.11e-23 98.2
Msa0502340 MtrunA17_Chr5g0416571 24.282 383 218 15 1 364 1 330 1.51e-22 100
Msa0502340 MtrunA17_Chr3g0085701 30.820 305 187 10 162 457 150 439 2.90e-22 103
Msa0502340 MtrunA17_Chr3g0083641 22.989 609 364 21 138 697 122 674 5.03e-22 102
Msa0502340 MtrunA17_Chr3g0105571 27.642 492 314 17 174 647 105 572 6.13e-22 101
Msa0502340 MtrunA17_Chr1g0169941 31.933 238 146 8 251 482 30 257 8.77e-22 97.8
Msa0502340 MtrunA17_Chr6g0468141 28.231 294 173 10 106 396 5 263 1.13e-21 95.9
Msa0502340 MtrunA17_Chr5g0415491 30.137 219 141 6 153 366 10 221 1.40e-21 94.4
Msa0502340 MtrunA17_Chr8g0338681 29.084 251 162 6 223 468 1 240 1.92e-21 94.7
Msa0502340 MtrunA17_Chr3g0091121 24.606 508 328 19 409 876 19 511 2.77e-21 99.8
Msa0502340 MtrunA17_Chr1g0160871 37.975 158 79 4 626 771 1 151 3.37e-21 91.3
Msa0502340 MtrunA17_Chr4g0010491 30.556 288 166 11 161 436 156 421 3.94e-21 97.4
Msa0502340 MtrunA17_Chr3g0105551 26.501 483 264 19 27 487 29 442 5.75e-21 99.8
Msa0502340 MtrunA17_Chr8g0360991 26.877 506 288 21 186 649 169 634 1.28e-20 98.2
Msa0502340 MtrunA17_Chr6g0468191 28.326 233 150 7 1 229 1 220 3.58e-20 91.3
Msa0502340 MtrunA17_Chr5g0410401 24.022 741 440 28 189 858 45 733 4.40e-20 96.3
Msa0502340 MtrunA17_Chr3g0091961 26.854 391 244 17 319 689 3 371 7.41e-20 93.2
Msa0502340 MtrunA17_Chr3g0105521 27.290 513 283 21 175 672 40 477 2.70e-19 94.0
Msa0502340 MtrunA17_Chr2g0308491 28.125 256 172 7 183 436 10 255 3.06e-19 88.6
Msa0502340 MtrunA17_Chr3g0083681 24.231 553 315 20 190 697 182 675 4.51e-19 93.2
Msa0502340 MtrunA17_Chr5g0410261 23.280 872 527 33 66 854 69 881 4.71e-19 93.2
Msa0502340 MtrunA17_Chr5g0443761 26.253 499 300 19 190 652 33 499 5.66e-19 92.8
Msa0502340 MtrunA17_Chr5g0410161 23.458 746 435 31 190 858 329 1015 9.15e-19 92.4
Msa0502340 MtrunA17_Chr3g0100261 24.426 741 473 28 190 878 173 878 1.06e-18 92.0
Msa0502340 MtrunA17_Chr3g0085721 29.758 289 174 11 110 383 83 357 1.44e-18 89.0
Msa0502340 MtrunA17_Chr3g0099571 25.755 563 330 24 155 673 138 656 1.66e-18 91.3
Msa0502340 MtrunA17_Chr5g0413821 26.891 238 135 7 1 217 1 220 2.30e-18 85.1
Msa0502340 MtrunA17_Chr8g0392521 30.556 180 111 6 174 343 143 318 2.38e-18 87.4
Msa0502340 MtrunA17_Chr3g0100981 49.057 106 54 0 767 872 4 109 2.42e-18 82.8
Msa0502340 MtrunA17_Chr3g0100771 49.057 106 54 0 767 872 4 109 2.42e-18 82.8
Msa0502340 MtrunA17_Chr3g0081941 23.016 756 469 30 190 895 165 857 4.05e-18 90.1
Msa0502340 MtrunA17_Chr3g0097641 26.899 487 290 19 186 640 138 590 8.92e-18 89.0
Msa0502340 MtrunA17_Chr7g0257251 35.329 167 97 5 321 482 5 165 1.08e-17 82.0
Msa0502340 MtrunA17_Chr3g0096721 23.451 678 376 27 27 649 33 622 1.23e-17 88.6
Msa0502340 MtrunA17_Chr3g0082381 24.458 323 184 11 34 329 43 332 1.50e-17 85.1
Msa0502340 MtrunA17_Chr3g0108811 29.044 272 180 8 190 459 180 440 1.56e-17 88.6
Msa0502340 MtrunA17_Chr3g0108151 28.053 303 198 11 166 459 144 435 3.48e-17 87.0
Msa0502340 MtrunA17_Chr3g0100691 47.328 131 63 2 767 891 4 134 3.86e-17 79.0
Msa0502340 MtrunA17_Chr3g0108821 30.403 273 175 9 190 459 168 428 6.48e-17 86.3
Msa0502340 MtrunA17_Chr3g0108101 28.413 271 173 8 196 459 1 257 1.27e-16 81.3
Msa0502340 MtrunA17_Chr1g0153981 24.051 711 401 28 181 870 196 788 1.62e-16 84.7
Msa0502340 MtrunA17_Chr3g0082371 26.854 391 224 14 374 726 1 367 1.83e-16 83.6
Msa0502340 MtrunA17_Chr3g0108791 28.947 266 176 8 196 459 1 255 2.41e-16 82.8
Msa0502340 MtrunA17_Chr3g0085431 25.735 544 324 23 366 877 2 497 3.42e-16 82.8
Msa0502340 MtrunA17_Chr3g0108061 25.761 493 293 22 196 672 1 436 4.91e-16 82.4
Msa0502340 MtrunA17_Chr3g0097631 33.878 245 137 11 196 432 1 228 8.78e-16 80.5
Msa0502340 MtrunA17_Chr6g0475721 23.440 529 352 18 172 680 154 649 1.39e-15 81.3
Msa0502340 MtrunA17_Chr3g0085711 27.976 336 204 14 570 877 130 455 1.79e-15 81.3
Msa0502340 MtrunA17_Chr3g0107961 30.088 226 148 5 196 421 1 216 1.88e-15 79.7
Msa0502340 MtrunA17_Chr3g0108011 28.929 280 165 11 190 459 204 459 1.97e-15 81.6
Msa0502340 MtrunA17_Chr2g0282891 27.317 410 227 17 298 692 9 362 2.58e-15 79.0
Msa0502340 MtrunA17_Chr8g0342201 24.900 498 290 21 187 650 249 696 9.48e-15 78.6
Msa0502340 MtrunA17_Chr3g0107931 28.727 275 180 8 190 459 191 454 9.69e-15 79.3
Msa0502340 MtrunA17_Chr4g0009241 25.714 560 359 22 182 724 740 1259 1.17e-14 79.0
Msa0502340 MtrunA17_Chr2g0299881 25.078 638 347 32 186 797 215 747 3.23e-14 77.4
Msa0502340 MtrunA17_Chr4g0009171 31.963 219 119 10 190 397 206 405 4.74e-14 77.0
Msa0502340 MtrunA17_Chr7g0223931 27.564 312 207 10 196 503 1 297 5.23e-14 76.3
Msa0502340 MtrunA17_Chr5g0402721 25.487 565 330 24 189 700 168 694 5.42e-14 76.3
Msa0502340 MtrunA17_Chr5g0420331 24.333 637 367 26 190 751 209 805 7.63e-14 76.3
Msa0502340 MtrunA17_Chr7g0255111 23.197 513 346 20 155 646 145 630 8.35e-14 76.3
Msa0502340 MtrunA17_Chr8g0342741 28.125 256 154 7 191 438 206 439 8.95e-14 75.1
Msa0502340 MtrunA17_Chr3g0105621 25.761 427 283 13 190 603 119 524 9.14e-14 75.1
Msa0502340 MtrunA17_Chr8g0342911 25.050 499 305 20 187 670 225 669 1.04e-13 75.9
Msa0502340 MtrunA17_Chr8g0374301 22.528 617 397 23 189 775 196 761 1.47e-13 75.1
Msa0502340 MtrunA17_Chr7g0255401 24.385 488 295 20 191 632 118 577 1.66e-13 75.1
Msa0502340 MtrunA17_Chr8g0342781 26.804 291 180 8 156 438 174 439 1.69e-13 74.3
Msa0502340 MtrunA17_Chr4g0009141 29.911 224 133 9 182 397 718 925 2.27e-13 74.7
Msa0502340 MtrunA17_Chr3g0108171 28.676 272 178 8 190 455 186 447 2.64e-13 74.7
Msa0502340 MtrunA17_Chr1g0163791 24.641 487 333 15 172 649 154 615 2.93e-13 74.3
Msa0502340 MtrunA17_Chr5g0402771 28.662 314 183 17 189 487 181 468 3.28e-13 73.9
Msa0502340 MtrunA17_Chr8g0351551 23.327 553 347 22 187 718 212 708 3.60e-13 73.9
Msa0502340 MtrunA17_Chr8g0350071 29.183 257 150 9 196 443 1 234 3.64e-13 72.0
Msa0502340 MtrunA17_Chr3g0102271 25.094 534 335 18 171 677 200 695 4.66e-13 73.6
Msa0502340 MtrunA17_Chr4g0009401 29.717 212 131 6 190 397 704 901 6.40e-13 73.2
Msa0502340 MtrunA17_Chr7g0221171 23.247 542 347 22 190 699 229 733 8.32e-13 72.8
Msa0502340 MtrunA17_Chr4g0010711 27.491 582 326 26 190 737 719 1238 8.85e-13 72.8
Msa0502340 MtrunA17_Chr7g0221131 23.077 559 361 22 190 722 241 756 9.18e-13 72.4
Msa0502340 MtrunA17_Chr1g0146241 23.077 481 292 20 1 457 15 441 9.74e-13 72.8
Msa0502340 MtrunA17_Chr3g0105481 25.942 451 283 16 190 630 119 528 9.89e-13 72.8
Msa0502340 MtrunA17_Chr8g0342131 26.050 476 281 24 187 646 216 636 1.03e-12 72.4
Msa0502340 MtrunA17_Chr7g0221061 24.727 550 310 27 190 724 277 737 1.05e-12 72.4
Msa0502340 MtrunA17_Chr5g0414171 28.736 174 118 3 325 498 250 417 1.22e-12 70.9
Msa0502340 MtrunA17_Chr5g0414171 27.434 226 137 7 1 212 1 213 3.82e-11 66.2
Msa0502340 MtrunA17_Chr6g0479001 28.063 253 167 5 187 439 207 444 1.66e-12 71.6
Msa0502340 MtrunA17_Chr2g0313461 22.433 896 530 37 50 872 37 840 2.08e-12 71.6
Msa0502340 MtrunA17_Chr6g0455551 25.093 538 319 22 201 682 296 805 2.19e-12 71.2
Msa0502340 MtrunA17_Chr8g0374351 29.073 313 186 14 185 487 107 393 2.33e-12 71.2
Msa0502340 MtrunA17_Chr4g0009041 29.018 224 135 7 182 397 706 913 2.34e-12 71.6
Msa0502340 MtrunA17_Chr5g0402681 27.419 310 194 12 185 487 163 448 3.01e-12 70.9
Msa0502340 MtrunA17_Chr8g0363851 31.250 288 175 11 587 867 523 794 3.19e-12 70.9
Msa0502340 MtrunA17_Chr8g0363851 29.897 291 178 9 590 878 667 933 5.64e-11 67.0
Msa0502340 MtrunA17_Chr5g0430341 27.134 328 178 13 593 885 118 419 4.65e-12 69.7
Msa0502340 MtrunA17_Chr5g0420341 24.405 504 315 18 190 669 209 670 4.87e-12 70.1
Msa0502340 MtrunA17_Chr6g0454951 24.699 498 281 18 190 650 295 735 8.32e-12 69.7
Msa0502340 MtrunA17_Chr6g0455221 25.261 574 325 25 190 724 214 722 8.85e-12 69.3
Msa0502340 MtrunA17_Chr2g0313491 24.170 542 350 23 190 701 174 684 1.05e-11 69.3
Msa0502340 MtrunA17_Chr4g0009351 28.821 229 129 9 182 397 113 320 1.28e-11 67.8
Msa0502340 MtrunA17_Chr5g0414161 32.308 260 152 13 590 830 67 321 1.33e-11 67.8
Msa0502340 MtrunA17_Chr4g0005591 25.655 534 299 22 190 672 278 764 1.33e-11 68.9
Msa0502340 MtrunA17_Chr3g0097031 25.474 475 312 19 190 641 117 572 1.40e-11 68.2
Msa0502340 MtrunA17_Chr6g0454931 25.263 475 283 19 190 649 275 692 1.73e-11 68.2
Msa0502340 MtrunA17_Chr4g0005291 23.722 489 304 18 177 649 255 690 1.99e-11 68.2
Msa0502340 MtrunA17_Chr2g0298531 24.044 549 318 23 166 672 198 689 2.41e-11 68.2
Msa0502340 MtrunA17_Chr4g0041441 24.457 552 343 22 181 695 195 709 2.59e-11 67.8
Msa0502340 MtrunA17_Chr6g0455031 29.876 241 137 10 190 421 229 446 3.12e-11 67.8
Msa0502340 MtrunA17_Chr3g0107621 28.099 242 154 7 186 421 164 391 3.60e-11 67.0
Msa0502340 MtrunA17_Chr8g0363891 30.208 288 179 10 587 867 58 330 4.01e-11 67.0
Msa0502340 MtrunA17_Chr8g0339031 25.147 680 395 33 190 791 219 862 4.18e-11 67.4
Msa0502340 MtrunA17_Chr2g0330121 24.247 631 389 22 264 872 106 669 4.53e-11 67.0
Msa0502340 MtrunA17_Chr2g0299791 26.119 268 157 10 182 435 207 447 4.54e-11 67.4
Msa0502340 MtrunA17_Chr3g0084731 24.231 553 328 21 251 797 278 745 5.28e-11 67.0
Msa0502340 MtrunA17_Chr3g0102171 24.808 520 328 18 184 677 212 694 5.95e-11 66.6
Msa0502340 MtrunA17_Chr5g0410351 27.964 329 198 12 569 858 538 866 6.86e-11 66.6
Msa0502340 MtrunA17_Chr3g0119001 25.684 475 309 19 171 628 203 650 7.35e-11 66.6
Msa0502340 MtrunA17_Chr7g0242781 26.423 246 161 7 196 438 1 229 7.98e-11 65.5
Msa0502340 MtrunA17_Chr7g0223531 30.556 216 114 8 190 391 219 412 8.06e-11 66.2
Msa0502340 MtrunA17_Chr6g0470061 26.887 212 133 5 1 205 1 197 8.46e-11 62.4
Msa0502340 MtrunA17_Chr6g0478841 27.200 250 167 6 190 439 210 444 9.01e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502340 AT3G07040.1 31.760 932 575 18 1 893 1 910 3.17e-131 417
Msa0502340 AT1G53350.1 27.878 947 584 30 1 894 1 901 4.57e-81 281
Msa0502340 AT5G43470.3 28.115 907 590 22 1 875 1 877 6.21e-80 278
Msa0502340 AT5G43470.2 28.115 907 590 22 1 875 1 877 6.21e-80 278
Msa0502340 AT5G43470.4 28.115 907 590 22 1 875 1 877 6.21e-80 278
Msa0502340 AT5G43470.1 28.115 907 590 22 1 875 1 877 6.21e-80 278
Msa0502340 AT5G35450.2 27.516 934 595 27 1 894 1 892 1.04e-79 278
Msa0502340 AT5G35450.1 27.516 934 595 27 1 894 1 892 1.04e-79 278
Msa0502340 AT3G46530.1 28.927 885 549 28 1 862 1 828 4.79e-79 275
Msa0502340 AT5G48620.6 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT5G48620.1 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT5G48620.4 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT5G48620.2 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT5G48620.3 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT5G48620.5 27.692 910 590 26 1 875 1 877 5.31e-79 276
Msa0502340 AT3G46710.1 28.409 880 546 28 1 848 1 828 1.27e-78 273
Msa0502340 AT3G46730.1 28.974 887 541 26 1 854 1 831 2.41e-75 265
Msa0502340 AT3G50950.2 28.521 852 519 31 1 805 1 809 5.15e-75 264
Msa0502340 AT3G50950.1 28.521 852 519 31 1 805 1 809 5.15e-75 264
Msa0502340 AT1G50180.1 28.817 930 544 31 1 892 1 850 5.34e-75 264
Msa0502340 AT1G59780.1 25.989 935 599 29 1 895 6 887 4.69e-73 259
Msa0502340 AT1G59780.2 25.989 935 599 29 1 895 1 882 5.48e-73 259
Msa0502340 AT1G58400.3 25.824 941 621 27 1 897 1 908 1.32e-70 252
Msa0502340 AT1G58400.2 25.824 941 621 27 1 897 1 908 1.32e-70 252
Msa0502340 AT1G58400.1 25.295 933 626 24 1 897 1 898 9.04e-68 244
Msa0502340 AT1G58410.1 26.204 893 604 24 6 870 4 869 1.37e-66 240
Msa0502340 AT1G58410.4 26.204 893 604 24 6 870 4 869 1.37e-66 240
Msa0502340 AT1G58410.2 26.204 893 604 24 6 870 4 869 1.37e-66 240
Msa0502340 AT1G58390.1 25.981 943 619 29 1 900 1 907 1.06e-65 238
Msa0502340 AT1G58390.2 25.981 943 619 29 1 900 1 907 1.06e-65 238
Msa0502340 AT1G59218.1 26.500 1000 562 36 1 861 1 966 5.31e-64 234
Msa0502340 AT1G59218.2 26.500 1000 562 36 1 861 1 966 5.31e-64 234
Msa0502340 AT1G59218.3 26.500 1000 562 36 1 861 1 966 5.31e-64 234
Msa0502340 AT1G58848.1 26.500 1000 562 36 1 861 1 966 5.31e-64 234
Msa0502340 AT1G58848.2 26.500 1000 562 36 1 861 1 966 5.31e-64 234
Msa0502340 AT1G58602.2 25.277 902 588 27 1 854 1 864 6.50e-58 217
Msa0502340 AT1G58602.1 25.277 902 588 27 1 854 1 864 6.50e-58 217
Msa0502340 AT1G10920.1 29.840 687 427 23 164 818 37 700 2.96e-57 211
Msa0502340 AT1G10920.2 29.840 687 427 23 164 818 37 700 2.96e-57 211
Msa0502340 AT1G10920.4 29.840 687 427 23 164 818 37 700 2.96e-57 211
Msa0502340 AT1G59620.2 27.034 762 477 24 163 892 23 737 3.12e-57 211
Msa0502340 AT1G59124.2 25.803 903 581 30 1 858 1 859 3.92e-57 214
Msa0502340 AT1G58807.1 25.803 903 581 30 1 858 1 859 3.92e-57 214
Msa0502340 AT1G59124.1 25.839 894 574 30 1 849 1 850 1.67e-56 210
Msa0502340 AT1G58807.2 25.839 894 574 30 1 849 1 850 1.67e-56 210
Msa0502340 AT1G58410.3 25.168 894 580 25 6 870 4 837 2.13e-55 207
Msa0502340 AT3G14470.1 26.652 893 562 36 38 869 46 906 8.13e-55 207
Msa0502340 AT3G14470.2 26.652 893 562 36 38 869 46 906 8.13e-55 207
Msa0502340 AT3G14460.1 26.667 690 447 23 34 697 39 695 8.35e-46 179
Msa0502340 AT4G10780.1 28.870 478 306 17 190 649 175 636 6.50e-35 144
Msa0502340 AT4G10780.2 28.870 478 306 17 190 649 175 636 8.02e-35 144
Msa0502340 AT1G12220.3 28.516 519 330 21 190 688 57 554 2.56e-34 141
Msa0502340 AT1G12220.1 28.516 519 330 21 190 688 178 675 4.43e-34 141
Msa0502340 AT1G12220.2 28.516 519 330 21 190 688 178 675 4.43e-34 141
Msa0502340 AT1G10920.5 28.051 549 344 19 302 818 1 530 4.48e-34 139
Msa0502340 AT1G10920.3 28.051 549 344 19 302 818 1 530 4.48e-34 139
Msa0502340 AT4G26090.1 23.656 744 449 28 186 858 173 868 3.67e-31 132
Msa0502340 AT1G61190.2 26.006 696 457 23 190 858 175 839 6.35e-31 131
Msa0502340 AT1G61190.3 26.006 696 457 23 190 858 175 839 6.35e-31 131
Msa0502340 AT1G61190.1 25.775 710 466 24 190 869 175 853 6.88e-31 131
Msa0502340 AT1G61310.1 25.386 713 473 23 190 872 176 859 1.38e-30 130
Msa0502340 AT1G12210.3 26.984 504 301 19 190 672 136 593 1.10e-29 127
Msa0502340 AT1G12210.2 26.984 504 301 19 190 672 136 593 1.10e-29 127
Msa0502340 AT1G12210.1 26.984 504 301 19 190 672 178 635 1.99e-29 126
Msa0502340 AT1G61180.2 26.898 461 298 16 190 631 174 614 6.38e-29 125
Msa0502340 AT1G61180.1 26.898 461 298 16 190 631 174 614 7.21e-29 124
Msa0502340 AT1G61190.4 25.219 686 450 21 190 858 175 814 1.60e-28 123
Msa0502340 AT1G63350.4 25.404 681 439 28 190 858 174 797 4.50e-28 122
Msa0502340 AT1G63350.3 28.238 471 296 23 190 649 174 613 2.71e-27 120
Msa0502340 AT1G63350.2 28.238 471 296 23 190 649 174 613 2.71e-27 120
Msa0502340 AT1G63350.1 28.085 470 298 22 190 649 174 613 2.80e-27 119
Msa0502340 AT1G61300.1 26.786 448 281 16 190 614 63 486 2.11e-26 116
Msa0502340 AT1G12280.1 25.732 478 297 15 190 649 178 615 3.43e-26 116
Msa0502340 AT1G62630.1 26.275 510 319 18 201 677 185 670 1.04e-25 114
Msa0502340 AT1G63360.2 26.824 507 318 18 201 677 150 633 3.26e-25 113
Msa0502340 AT1G63360.1 26.824 507 318 18 201 677 185 668 3.94e-25 112
Msa0502340 AT1G61300.2 25.561 446 264 14 190 614 63 461 4.85e-25 112
Msa0502340 AT4G27220.1 25.403 496 312 18 191 657 137 603 6.28e-25 112
Msa0502340 AT5G63020.1 23.033 699 452 21 4 681 5 638 6.64e-25 112
Msa0502340 AT4G27220.2 25.403 496 312 18 191 657 145 611 9.83e-25 111
Msa0502340 AT5G05400.2 24.547 717 437 30 190 858 8 668 2.33e-24 110
Msa0502340 AT5G05400.3 24.547 717 437 30 190 858 8 668 2.33e-24 110
Msa0502340 AT5G47250.1 25.704 533 348 19 180 703 168 661 2.77e-24 110
Msa0502340 AT5G05400.1 24.721 716 437 29 190 858 177 837 3.44e-24 109
Msa0502340 AT1G12290.1 22.720 647 414 26 4 612 5 603 1.16e-23 108
Msa0502340 AT1G12290.4 25.282 443 295 16 190 612 135 561 3.49e-23 106
Msa0502340 AT1G12290.3 25.282 443 295 16 190 612 135 561 3.49e-23 106
Msa0502340 AT1G12290.2 25.282 443 295 16 190 612 135 561 3.49e-23 106
Msa0502340 AT1G51480.1 25.368 544 334 23 180 698 165 661 4.75e-23 106
Msa0502340 AT5G43740.1 25.277 542 337 20 180 698 163 659 1.44e-22 104
Msa0502340 AT5G43740.2 25.277 542 337 20 180 698 163 659 1.44e-22 104
Msa0502340 AT5G43730.4 25.376 532 332 20 186 696 170 657 2.18e-22 103
Msa0502340 AT5G43730.1 25.376 532 332 20 186 696 170 657 2.18e-22 103
Msa0502340 AT5G43730.3 25.376 532 332 20 186 696 170 657 2.18e-22 103
Msa0502340 AT5G43730.2 25.376 532 332 20 186 696 170 657 2.18e-22 103
Msa0502340 AT5G43730.5 25.376 532 332 20 186 696 170 657 2.18e-22 103
Msa0502340 AT1G15890.2 28.190 337 216 14 185 513 11 329 2.83e-21 100
Msa0502340 AT1G15890.1 28.190 337 216 14 185 513 171 489 4.79e-21 99.8
Msa0502340 AT4G27190.1 26.200 500 315 21 174 649 156 625 9.72e-21 99.0
Msa0502340 AT1G12280.2 23.690 477 275 16 190 649 140 544 1.10e-16 85.5
Msa0502340 AT5G17680.2 23.950 714 455 26 190 861 209 876 3.99e-16 84.0
Msa0502340 AT5G17680.1 23.950 714 455 26 190 861 208 875 4.34e-16 84.0
Msa0502340 AT4G33300.2 28.431 306 167 13 190 483 202 467 2.22e-15 81.3
Msa0502340 AT4G33300.1 28.431 306 167 13 190 483 202 467 2.22e-15 81.3
Msa0502340 AT5G47260.1 23.529 629 403 21 263 858 237 820 6.67e-15 80.1
Msa0502340 AT1G69550.1 22.642 742 479 31 186 878 274 969 2.85e-13 74.7
Msa0502340 AT1G69550.1 31.973 294 173 13 577 858 934 1212 8.88e-12 70.1
Msa0502340 AT4G36140.2 25.553 497 276 20 191 630 420 879 4.16e-13 74.3
Msa0502340 AT4G36140.1 25.553 497 276 20 191 630 605 1064 5.68e-13 73.9
Msa0502340 AT4G12010.1 25.227 551 301 23 190 672 211 718 3.50e-11 68.2
Msa0502340 AT1G27170.1 23.584 759 427 33 190 891 213 875 3.91e-11 67.8
Msa0502340 AT1G27170.2 23.584 759 427 33 190 891 213 875 5.08e-11 67.4
Msa0502340 AT5G11250.2 24.663 742 478 32 186 891 255 951 5.27e-11 67.4
Msa0502340 AT3G04220.3 23.504 685 434 27 163 801 233 873 5.31e-11 67.4
Msa0502340 AT5G04720.1 25.758 264 156 7 181 437 193 423 6.01e-11 67.0
Msa0502340 AT5G11250.3 25.000 744 473 34 186 891 173 869 6.21e-11 67.0
Msa0502340 AT5G11250.1 25.000 744 473 34 186 891 173 869 6.21e-11 67.0

Find 179 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCATGCTTGTTATATT+TGG 0.039857 3_4:+44450193 Msa0502340:CDS
GTTTAATATTCCTACAAATT+TGG 0.080944 3_4:+44450679 Msa0502340:CDS
AGCTTCAAGTTCTCAGTATT+TGG 0.114999 3_4:+44451515 Msa0502340:CDS
AAAGATTGTTCTTCAGTTAA+AGG 0.119853 3_4:-44449900 None:intergenic
CATCCAAGGTCTCTAGATTT+TGG 0.132436 3_4:-44450778 None:intergenic
ACGTCGAACTGTTTCATTTA+AGG 0.136426 3_4:-44450492 None:intergenic
AAACAGGATTCACATTTAAT+TGG 0.157365 3_4:+44450122 Msa0502340:CDS
TGATCCACTTGAAGTATTTA+AGG 0.166268 3_4:+44450708 Msa0502340:CDS
CTTTGAGTAGTTTGGTTTCT+TGG 0.171955 3_4:-44448972 None:intergenic
TTATTGGATCTTCATTTAAA+TGG 0.174011 3_4:-44451252 None:intergenic
AATATAACAAGCATGATTTA+AGG 0.186917 3_4:-44450190 None:intergenic
AAGTACTTCCAATGCTTTAA+TGG 0.187119 3_4:+44450526 Msa0502340:CDS
GTTTCTGAAACCCTCCATTT+TGG 0.196348 3_4:-44451351 None:intergenic
AATTCAATTGTTATCGAAAA+AGG 0.206247 3_4:+44451409 Msa0502340:CDS
CTTGAAAAGATTGATGATTT+AGG 0.225419 3_4:+44450434 Msa0502340:CDS
AATGCTTTAATGGGGCTTAA+TGG 0.235608 3_4:+44450536 Msa0502340:CDS
TTGTCTTTCTTTAATAATAA+TGG 0.238479 3_4:+44452013 Msa0502340:three_prime_UTR
ACGACGAAGGTGTCAAAATA+TGG 0.242153 3_4:+44449094 Msa0502340:CDS
TTCAAATAAATCTTTCTCTT+TGG 0.247662 3_4:-44450063 None:intergenic
TGGAGCATGCCAATGGATTT+TGG 0.256022 3_4:-44450758 None:intergenic
AGGAAAATTGAAGCAGTTAA+AGG 0.268891 3_4:+44450985 Msa0502340:CDS
AACATCCATCATAGTCAAAT+TGG 0.273007 3_4:-44449947 None:intergenic
GGTCATGCCATTTGGCATTT+AGG 0.284206 3_4:-44449359 None:intergenic
CCTAAATCTTGTCTTGTTCA+TGG 0.290778 3_4:+44450392 Msa0502340:CDS
AAATCATGCTTGTTATATTT+GGG 0.291325 3_4:+44450194 Msa0502340:CDS
TTTAATATTCCTACAAATTT+GGG 0.291471 3_4:+44450680 Msa0502340:CDS
GAAATCTCTAAATATTGATT+TGG 0.310367 3_4:+44452041 Msa0502340:three_prime_UTR
CCATGAACAAGACAAGATTT+AGG 0.311414 3_4:-44450392 None:intergenic
TCCTCTGGATATCTCTATAA+TGG 0.320764 3_4:+44449662 Msa0502340:CDS
AGTACTTCCAATGCTTTAAT+GGG 0.325120 3_4:+44450527 Msa0502340:CDS
GTATCTTCAGCTAGAATTGA+TGG 0.325162 3_4:+44450365 Msa0502340:CDS
TCAATCGAATCAAAGATAAT+TGG 0.334435 3_4:-44450874 None:intergenic
GATATACCGATGAGGTCTTT+TGG 0.335609 3_4:-44449972 None:intergenic
GCTTCAAGTTCTCAGTATTT+GGG 0.337826 3_4:+44451516 Msa0502340:CDS
TTTGAGTAGTTTGGTTTCTT+GGG 0.351600 3_4:-44448971 None:intergenic
CCAAAGTCCCTTTGGAAAAT+CGG 0.352294 3_4:-44451960 None:intergenic
GGCAGAAATAGCAGTGTCTT+TGG 0.353701 3_4:+44448921 Msa0502340:CDS
GCGAACACCTTTGAGTAGTT+TGG 0.364625 3_4:-44448980 None:intergenic
ATTATCTTTGATTCGATTGA+AGG 0.366975 3_4:+44450877 Msa0502340:CDS
ATTGAAGCAGTTAAAGGGAT+TGG 0.368530 3_4:+44450991 Msa0502340:CDS
TTTGAAGTTGTTTAATAAGA+AGG 0.370694 3_4:+44449920 Msa0502340:CDS
AAATATGGGTGAAACAGGTT+AGG 0.378529 3_4:+44449109 Msa0502340:CDS
TTAAGCTTACTAATCTCCTT+TGG 0.379086 3_4:-44450827 None:intergenic
TGCAAGCATATTAGTGAAGA+TGG 0.379871 3_4:+44450461 Msa0502340:CDS
GAAAGTTTGCAATTCCAAAA+TGG 0.383191 3_4:+44451337 Msa0502340:CDS
TGTATCTTTACTCAAAACTA+TGG 0.383939 3_4:+44449209 Msa0502340:CDS
ACTTGAAGTATTTAAGGTTA+AGG 0.384667 3_4:+44450714 Msa0502340:CDS
GATTGGGTTTGGTTCAAGTT+GGG 0.385117 3_4:+44451008 Msa0502340:CDS
AAGCATGATTTAAGGTTGTA+TGG 0.386658 3_4:-44450182 None:intergenic
TTGAAGCAGTTAAAGGGATT+GGG 0.394576 3_4:+44450992 Msa0502340:CDS
GGAAAATTGAAGCAGTTAAA+GGG 0.396172 3_4:+44450986 Msa0502340:CDS
GCAGTTAAAGGGATTGGGTT+TGG 0.397354 3_4:+44450997 Msa0502340:CDS
TGTCAAAATATGGGTGAAAC+AGG 0.398296 3_4:+44449104 Msa0502340:CDS
CCGCTAGCAATTGTTGTCAT+TGG 0.401739 3_4:+44450026 Msa0502340:CDS
TATTGGATCTTCATTTAAAT+GGG 0.402423 3_4:-44451251 None:intergenic
GGAGGAAGAGGGGAAGACTT+TGG 0.402565 3_4:+44450289 Msa0502340:CDS
GCATTCCAATTTGACTATGA+TGG 0.403559 3_4:+44449942 Msa0502340:CDS
AACAGGATTCACATTTAATT+GGG 0.403948 3_4:+44450123 Msa0502340:CDS
ATCCTACTGCAGAATAAAGT+TGG 0.407875 3_4:-44449317 None:intergenic
TAGTCTTGGGTCATGCCATT+TGG 0.407879 3_4:-44449367 None:intergenic
CAACATAAAATAGTGTTTGT+AGG 0.407923 3_4:-44450922 None:intergenic
AGGGATATGTTGTGCAAGTT+GGG 0.422591 3_4:+44449630 Msa0502340:CDS
GTTACGAAGTGTTCCACAAC+TGG 0.423383 3_4:+44451459 Msa0502340:CDS
CATTGATGATTATTTGATCC+AGG 0.424926 3_4:+44449158 Msa0502340:CDS
AAGAGAAAGATTTATTTGAA+TGG 0.426025 3_4:+44450066 Msa0502340:CDS
ATCAAACTTCCCAAATTTGT+AGG 0.426227 3_4:-44450689 None:intergenic
ACTTTGAAGATTGCCGTGTA+TGG 0.426320 3_4:+44449568 Msa0502340:CDS
GGATTGGGTTTGGTTCAAGT+TGG 0.426932 3_4:+44451007 Msa0502340:CDS
TCCTTGTTGTCATAAATATC+CGG 0.430419 3_4:-44449818 None:intergenic
AAATGTTGTTCAATTGAAGT+TGG 0.430989 3_4:+44451222 Msa0502340:CDS
AAGCATCCACGCCTTCCTTA+AGG 0.432434 3_4:+44449035 Msa0502340:CDS
GATTTAACTCCACAACCATC+TGG 0.433679 3_4:-44450224 None:intergenic
TCTAAGTTTAGAGCTGAAAC+AGG 0.436188 3_4:+44450106 Msa0502340:CDS
CTAGAGACCTTGGATGTAAA+GGG 0.440975 3_4:+44450785 Msa0502340:CDS
TCTGGTAGCAATGGGAGGGC+AGG 0.442578 3_4:+44449494 Msa0502340:CDS
TCTAGAGACCTTGGATGTAA+AGG 0.444581 3_4:+44450784 Msa0502340:CDS
TTCAGACATTAAAGATGAGC+TGG 0.450021 3_4:+44449011 Msa0502340:CDS
GTTCCCCTCGTAGAAATTGA+TGG 0.450262 3_4:+44451583 Msa0502340:CDS
CAATGATAGAGAGGGACAAC+AGG 0.451236 3_4:-44451297 None:intergenic
AACATAAAATAGTGTTTGTA+GGG 0.455004 3_4:-44450921 None:intergenic
GGATTTGTGAAGGAGGAAGA+GGG 0.462548 3_4:+44450278 Msa0502340:CDS
AGGATTTGTGAAGGAGGAAG+AGG 0.466554 3_4:+44450277 Msa0502340:CDS
TTATCGTGTTCGATGATGTA+TGG 0.466901 3_4:+44449739 Msa0502340:CDS
TCGAAGTGCCAAAGTCCCTT+TGG 0.468489 3_4:-44451968 None:intergenic
ATTAAGCCCCATTAAAGCAT+TGG 0.472010 3_4:-44450534 None:intergenic
TACGAGGATGTTGTCCCACC+TGG 0.479780 3_4:-44449176 None:intergenic
GCGACAAGAAGTAAAAGATA+TGG 0.481932 3_4:+44449291 Msa0502340:CDS
ATCATTGACTATGCTTATGA+AGG 0.484159 3_4:+44451313 Msa0502340:CDS
TTAATGGATGCTCACATGTT+CGG 0.488058 3_4:+44450552 Msa0502340:CDS
GTTCAAGTTGGGAGAGAACC+TGG 0.489723 3_4:+44451019 Msa0502340:CDS
CAAAATTGTTAGAAAATGCA+AGG 0.490038 3_4:+44449998 Msa0502340:CDS
GTCATATCTCTGGTAGCAAT+GGG 0.492265 3_4:+44449486 Msa0502340:CDS
CAACTCACTTAAGTATCCTT+CGG 0.492340 3_4:-44450321 None:intergenic
TTGACTGACTGGTTGGTAAA+GGG 0.493853 3_4:+44449447 Msa0502340:CDS
GTTGGGATGCACTAATCCTC+TGG 0.495672 3_4:+44449647 Msa0502340:CDS
GGAATATATCCAGATGGTTG+TGG 0.496593 3_4:+44450215 Msa0502340:CDS
AAAGAATCACATGTAGACTT+TGG 0.496904 3_4:+44450596 Msa0502340:CDS
ATGTAAAGAGCAGCTAGTCT+TGG 0.496945 3_4:-44449381 None:intergenic
ATTGACTGACTGGTTGGTAA+AGG 0.496968 3_4:+44449446 Msa0502340:CDS
TGTAAAGAGCAGCTAGTCTT+GGG 0.501036 3_4:-44449380 None:intergenic
AAGACTAGCTGCTCTTTACA+TGG 0.501637 3_4:+44449383 Msa0502340:CDS
TTAACCTTAAATACTTCAAG+TGG 0.506382 3_4:-44450712 None:intergenic
AGAGCGCACTGTCATATCTC+TGG 0.507304 3_4:+44449476 Msa0502340:CDS
GATTTGTGAAGGAGGAAGAG+GGG 0.508967 3_4:+44450279 Msa0502340:CDS
GTAAAACTAATTGCAGAGCT+AGG 0.509798 3_4:+44450965 Msa0502340:CDS
GATAAACTTCCAAAATCCAT+TGG 0.512512 3_4:+44450749 Msa0502340:CDS
GAGGGATATGTTGTGCAAGT+TGG 0.513860 3_4:+44449629 Msa0502340:CDS
GATAAAAGAGCTGTAGCTAA+AGG 0.515490 3_4:+44449063 Msa0502340:CDS
CTGTAAGCCTAAATGCCAAA+TGG 0.519320 3_4:+44449352 Msa0502340:CDS
TGTCATATCTCTGGTAGCAA+TGG 0.519571 3_4:+44449485 Msa0502340:CDS
GCTCCAAAATCTAGAGACCT+TGG 0.519910 3_4:+44450775 Msa0502340:CDS
AATATGGGTGAAACAGGTTA+GGG 0.521235 3_4:+44449110 Msa0502340:CDS
CTGGTAGCAATGGGAGGGCA+GGG 0.521384 3_4:+44449495 Msa0502340:CDS
CGACGAAGGTGTCAAAATAT+GGG 0.522087 3_4:+44449095 Msa0502340:CDS
TATGTTGATTTAAATGTGGA+TGG 0.525581 3_4:+44450938 Msa0502340:CDS
AGCTGAAGGATTTGTGAAGG+AGG 0.525967 3_4:+44450271 Msa0502340:CDS
CAACTGGAGGTTGTACCCAC+TGG 0.531397 3_4:+44451475 Msa0502340:CDS
AATCACATGTAGACTTTGGT+AGG 0.534499 3_4:+44450600 Msa0502340:CDS
AGAATTTGAAGCATAGGTGC+AGG 0.541541 3_4:-44451148 None:intergenic
ATTCGATTGAAGGACAACAT+TGG 0.551102 3_4:+44450887 Msa0502340:CDS
AGTCTAAGAATTTGAAGCAT+AGG 0.551135 3_4:-44451154 None:intergenic
TTCCAACTTTATTCTGCAGT+AGG 0.551339 3_4:+44449315 Msa0502340:CDS
CGATTGAAGGACAACATTGG+AGG 0.551596 3_4:+44450890 Msa0502340:CDS
TCAAGTTCTTCATTTGAGCA+AGG 0.554538 3_4:-44451387 None:intergenic
TTTATCAGCATCCTTAAGGA+AGG 0.557179 3_4:-44449046 None:intergenic
TTGGTTTCTTGGGTTAACAC+TGG 0.560270 3_4:-44448961 None:intergenic
GGTTAGAGAAGTTGCCAGAG+TGG 0.561741 3_4:+44451185 Msa0502340:CDS
TGCATGCTATATTTGTGCAC+GGG 0.563001 3_4:+44451542 Msa0502340:CDS
GTTTGCAATTCCAAAATGGA+GGG 0.563211 3_4:+44451341 Msa0502340:CDS
AGTTTGCAATTCCAAAATGG+AGG 0.566162 3_4:+44451340 Msa0502340:CDS
GATGATTATTTGATCCAGGT+GGG 0.568645 3_4:+44449162 Msa0502340:CDS
CAAGAGACGAATTGACTGAC+TGG 0.569813 3_4:+44449436 Msa0502340:CDS
AAGTATTTAAGGTTAAGGCA+TGG 0.573023 3_4:+44450719 Msa0502340:CDS
GTTGAATGAGATGCAACACT+TGG 0.575264 3_4:+44451060 Msa0502340:CDS
CTCTAAGTTCTGAATGCCAG+TGG 0.578376 3_4:-44451491 None:intergenic
GATAGCTGAAGGATTTGTGA+AGG 0.581641 3_4:+44450268 Msa0502340:CDS
AGACGAATTGACTGACTGGT+TGG 0.582242 3_4:+44449440 Msa0502340:CDS
GGGTTAACACTGGAAGCAGT+TGG 0.583163 3_4:-44448951 None:intergenic
TGAAGCTTAGGAATCCACTC+TGG 0.583394 3_4:-44451199 None:intergenic
ATGCATGCTATATTTGTGCA+CGG 0.583746 3_4:+44451541 Msa0502340:CDS
AAAATTGTTAGAAAATGCAA+GGG 0.588783 3_4:+44449999 Msa0502340:CDS
TGATGATTATTTGATCCAGG+TGG 0.589558 3_4:+44449161 Msa0502340:CDS
TATATTTGTGCACGGGATTG+CGG 0.590552 3_4:+44451549 Msa0502340:CDS
AATGATATCTTCTATGCGAT+AGG 0.592316 3_4:-44449139 None:intergenic
TCGAGAGTCATTGATTAATG+AGG 0.592612 3_4:+44449686 Msa0502340:CDS
TATTTGGGAATATATCCAGA+TGG 0.592937 3_4:+44450209 Msa0502340:CDS
CAGCATCCTTAAGGAAGGCG+TGG 0.593713 3_4:-44449041 None:intergenic
ATGTGTGCCCTTTACATCCA+AGG 0.594995 3_4:-44450792 None:intergenic
ATATCTCTGGTAGCAATGGG+AGG 0.598876 3_4:+44449489 Msa0502340:CDS
ACATGTTCGTGTGTTGCCAA+AGG 0.603769 3_4:+44450811 Msa0502340:CDS
CGAAGAGACTAATTCGACAA+TGG 0.605881 3_4:+44450246 Msa0502340:CDS
ATTCGACAATGGATAGCTGA+AGG 0.607536 3_4:+44450257 Msa0502340:CDS
AAGCATAGTCAATGATAGAG+AGG 0.608224 3_4:-44451306 None:intergenic
GGACAACATCCTCGTAATCG+TGG 0.608480 3_4:+44449183 Msa0502340:CDS
GTGGGTACAACCTCCAGTTG+TGG 0.610521 3_4:-44451472 None:intergenic
TTTGGCATTTAGGCTTACAG+TGG 0.611080 3_4:-44449349 None:intergenic
ATCTCCATCAATTTCTACGA+GGG 0.611538 3_4:-44451587 None:intergenic
AAATTCTTAGACTACATGCA+AGG 0.612099 3_4:+44451164 Msa0502340:CDS
GTACTTCCAATGCTTTAATG+GGG 0.618740 3_4:+44450528 Msa0502340:CDS
CAAGAAACCAAACTACTCAA+AGG 0.620792 3_4:+44448973 Msa0502340:CDS
AGCATAGTCAATGATAGAGA+GGG 0.625302 3_4:-44451305 None:intergenic
AGTCATTGATTAATGAGGTG+AGG 0.630770 3_4:+44449691 Msa0502340:CDS
GATACACATCCACGATTACG+AGG 0.631216 3_4:-44449192 None:intergenic
TTTGTAGGAATATTAAACAG+TGG 0.632466 3_4:-44450674 None:intergenic
ACGAAGTGTTCCACAACTGG+AGG 0.639420 3_4:+44451462 Msa0502340:CDS
TGTTGTCCAAAAGACCTCAT+CGG 0.649464 3_4:+44449966 Msa0502340:CDS
TCTAAGTTCTGAATGCCAGT+GGG 0.651043 3_4:-44451490 None:intergenic
TATCTCTGGTAGCAATGGGA+GGG 0.651968 3_4:+44449490 Msa0502340:CDS
ACTTTGGAAGAAGTTGCCGA+AGG 0.660177 3_4:+44450305 Msa0502340:CDS
GAGGAAAATAAAGTCATACC+AGG 0.664935 3_4:-44451037 None:intergenic
GCCGGATATTTATGACAACA+AGG 0.673345 3_4:+44449817 Msa0502340:CDS
ACTACTCAAAGGTGTTCGCG+AGG 0.677561 3_4:+44448984 Msa0502340:CDS
TCTCCATCAATTTCTACGAG+GGG 0.685169 3_4:-44451586 None:intergenic
CATCTCCATCAATTTCTACG+AGG 0.694312 3_4:-44451588 None:intergenic
TCCATTATAGAGATATCCAG+AGG 0.700831 3_4:-44449663 None:intergenic
GAGAAACTTTGATCCATACA+CGG 0.714483 3_4:-44449581 None:intergenic
TCATGTGCTATTCGACGACG+AGG 0.715330 3_4:-44449234 None:intergenic
CCAATGACAACAATTGCTAG+CGG 0.725976 3_4:-44450026 None:intergenic
GTGTTGCATCTCATTCAACG+AGG 0.808899 3_4:-44451056 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGGGATAAAAAAAATTTT+AGG + chr3_4:44450140-44450159 Msa0502340:CDS 15.0%
!! TTTAATATTCCTACAAATTT+GGG + chr3_4:44450680-44450699 Msa0502340:CDS 15.0%
!!! ATTTTATGTTGATTTAAATG+TGG + chr3_4:44450934-44450953 Msa0502340:CDS 15.0%
!!! AAAATAAGAGACATTATTTT+AGG - chr3_4:44451756-44451775 None:intergenic 15.0%
!! AAAAAAAATCATATAACAGA+AGG - chr3_4:44451780-44451799 None:intergenic 15.0%
!! TTGTCTTTCTTTAATAATAA+TGG + chr3_4:44452013-44452032 Msa0502340:three_prime_UTR 15.0%
!! TAGATAATAAAAAAAGAAGC+CGG + chr3_4:44449799-44449818 Msa0502340:CDS 20.0%
!!! TTTGAAGTTGTTTAATAAGA+AGG + chr3_4:44449920-44449939 Msa0502340:CDS 20.0%
!! AAAATTGTTAGAAAATGCAA+GGG + chr3_4:44449999-44450018 Msa0502340:CDS 20.0%
!! TTCAAATAAATCTTTCTCTT+TGG - chr3_4:44450066-44450085 None:intergenic 20.0%
!! AAGAGAAAGATTTATTTGAA+TGG + chr3_4:44450066-44450085 Msa0502340:CDS 20.0%
!! AATATAACAAGCATGATTTA+AGG - chr3_4:44450193-44450212 None:intergenic 20.0%
!!! TAAATCATGCTTGTTATATT+TGG + chr3_4:44450193-44450212 Msa0502340:CDS 20.0%
!!! AAATCATGCTTGTTATATTT+GGG + chr3_4:44450194-44450213 Msa0502340:CDS 20.0%
!! GTTTAATATTCCTACAAATT+TGG + chr3_4:44450679-44450698 Msa0502340:CDS 20.0%
!! AACATAAAATAGTGTTTGTA+GGG - chr3_4:44450924-44450943 None:intergenic 20.0%
!! TATTGGATCTTCATTTAAAT+GGG - chr3_4:44451254-44451273 None:intergenic 20.0%
!! TTATTGGATCTTCATTTAAA+TGG - chr3_4:44451255-44451274 None:intergenic 20.0%
!!! AAACTTTGTAGTGATTTTAT+TGG - chr3_4:44451271-44451290 None:intergenic 20.0%
!! AATTCAATTGTTATCGAAAA+AGG + chr3_4:44451409-44451428 Msa0502340:CDS 20.0%
!!! ATGAATAATTTGTTGTGATT+TGG + chr3_4:44451908-44451927 Msa0502340:intron 20.0%
!!! GAAATCTCTAAATATTGATT+TGG + chr3_4:44452041-44452060 Msa0502340:three_prime_UTR 20.0%
! TGTATCTTTACTCAAAACTA+TGG + chr3_4:44449209-44449228 Msa0502340:CDS 25.0%
! ATACAGTAAAAAGACTATTG+AGG + chr3_4:44449610-44449629 Msa0502340:CDS 25.0%
! TACAGTAAAAAGACTATTGA+GGG + chr3_4:44449611-44449630 Msa0502340:CDS 25.0%
!! ATGTATGGAATGTACATTTT+TGG + chr3_4:44449754-44449773 Msa0502340:CDS 25.0%
!! TGTATGGAATGTACATTTTT+GGG + chr3_4:44449755-44449774 Msa0502340:CDS 25.0%
! AAAGATTGTTCTTCAGTTAA+AGG - chr3_4:44449903-44449922 None:intergenic 25.0%
!! CTTGCATTTTCTAACAATTT+TGG - chr3_4:44450000-44450019 None:intergenic 25.0%
! CAAAATTGTTAGAAAATGCA+AGG + chr3_4:44449998-44450017 Msa0502340:CDS 25.0%
! AAACAGGATTCACATTTAAT+TGG + chr3_4:44450122-44450141 Msa0502340:CDS 25.0%
! AACAGGATTCACATTTAATT+GGG + chr3_4:44450123-44450142 Msa0502340:CDS 25.0%
!! CTAAATCATCAATCTTTTCA+AGG - chr3_4:44450436-44450455 None:intergenic 25.0%
!! CTTGAAAAGATTGATGATTT+AGG + chr3_4:44450434-44450453 Msa0502340:CDS 25.0%
! TTTGTAGGAATATTAAACAG+TGG - chr3_4:44450677-44450696 None:intergenic 25.0%
! TTAACCTTAAATACTTCAAG+TGG - chr3_4:44450715-44450734 None:intergenic 25.0%
!! ACTTGAAGTATTTAAGGTTA+AGG + chr3_4:44450714-44450733 Msa0502340:CDS 25.0%
! AAAAATCTACGACATCTTAT+CGG + chr3_4:44450848-44450867 Msa0502340:CDS 25.0%
! TCAATCGAATCAAAGATAAT+TGG - chr3_4:44450877-44450896 None:intergenic 25.0%
!! ATTATCTTTGATTCGATTGA+AGG + chr3_4:44450877-44450896 Msa0502340:CDS 25.0%
! CAACATAAAATAGTGTTTGT+AGG - chr3_4:44450925-44450944 None:intergenic 25.0%
!!! TATGTTGATTTAAATGTGGA+TGG + chr3_4:44450938-44450957 Msa0502340:CDS 25.0%
! AAATGTTGTTCAATTGAAGT+TGG + chr3_4:44451222-44451241 Msa0502340:CDS 25.0%
! ATCCTATTTCAGGAAAATTA+AGG + chr3_4:44451641-44451660 Msa0502340:intron 25.0%
! GATTGTTTACAGTTATATGA+AGG - chr3_4:44451682-44451701 None:intergenic 25.0%
!! ACATTATGAAGTACTATTCT+AGG + chr3_4:44451821-44451840 Msa0502340:intron 25.0%
!!! ATAATTTGTTGTGATTTGGT+AGG + chr3_4:44451912-44451931 Msa0502340:intron 25.0%
! TTTGAGTAGTTTGGTTTCTT+GGG - chr3_4:44448974-44448993 None:intergenic 30.0%
AATGATATCTTCTATGCGAT+AGG - chr3_4:44449142-44449161 None:intergenic 30.0%
! CATTGATGATTATTTGATCC+AGG + chr3_4:44449158-44449177 Msa0502340:CDS 30.0%
CTTGCTTTCAAAAACTTTCT+TGG - chr3_4:44449535-44449554 None:intergenic 30.0%
!! CAAGAAAGTTTTTGAAAGCA+AGG + chr3_4:44449533-44449552 Msa0502340:CDS 30.0%
GGAATTATTTGCAGCAAAAA+AGG + chr3_4:44449712-44449731 Msa0502340:CDS 30.0%
! TCCTTGTTGTCATAAATATC+CGG - chr3_4:44449821-44449840 None:intergenic 30.0%
AACATCCATCATAGTCAAAT+TGG - chr3_4:44449950-44449969 None:intergenic 30.0%
! AAGCATGATTTAAGGTTGTA+TGG - chr3_4:44450185-44450204 None:intergenic 30.0%
TATTTGGGAATATATCCAGA+TGG + chr3_4:44450209-44450228 Msa0502340:CDS 30.0%
AAGTACTTCCAATGCTTTAA+TGG + chr3_4:44450526-44450545 Msa0502340:CDS 30.0%
AGTACTTCCAATGCTTTAAT+GGG + chr3_4:44450527-44450546 Msa0502340:CDS 30.0%
AAAGAATCACATGTAGACTT+TGG + chr3_4:44450596-44450615 Msa0502340:CDS 30.0%
ATCAAACTTCCCAAATTTGT+AGG - chr3_4:44450692-44450711 None:intergenic 30.0%
! TGATCCACTTGAAGTATTTA+AGG + chr3_4:44450708-44450727 Msa0502340:CDS 30.0%
! AAGTATTTAAGGTTAAGGCA+TGG + chr3_4:44450719-44450738 Msa0502340:CDS 30.0%
GATAAACTTCCAAAATCCAT+TGG + chr3_4:44450749-44450768 Msa0502340:CDS 30.0%
TTAAGCTTACTAATCTCCTT+TGG - chr3_4:44450830-44450849 None:intergenic 30.0%
AGGAAAATTGAAGCAGTTAA+AGG + chr3_4:44450985-44451004 Msa0502340:CDS 30.0%
GGAAAATTGAAGCAGTTAAA+GGG + chr3_4:44450986-44451005 Msa0502340:CDS 30.0%
! AGTCTAAGAATTTGAAGCAT+AGG - chr3_4:44451157-44451176 None:intergenic 30.0%
AAATTCTTAGACTACATGCA+AGG + chr3_4:44451164-44451183 Msa0502340:CDS 30.0%
!!! TGAACAACATTTTGAAGCTT+AGG - chr3_4:44451214-44451233 None:intergenic 30.0%
! ATCATTGACTATGCTTATGA+AGG + chr3_4:44451313-44451332 Msa0502340:CDS 30.0%
GAAAGTTTGCAATTCCAAAA+TGG + chr3_4:44451337-44451356 Msa0502340:CDS 30.0%
TGAAATCTCAATCCTATTTC+AGG + chr3_4:44451631-44451650 Msa0502340:intron 30.0%
! CACCTTAATTTTCCTGAAAT+AGG - chr3_4:44451646-44451665 None:intergenic 30.0%
!!! ATTTTGAAGACTAGCTTGTT+TGG - chr3_4:44451880-44451899 None:intergenic 30.0%
! CTTTGAGTAGTTTGGTTTCT+TGG - chr3_4:44448975-44448994 None:intergenic 35.0%
CAAGAAACCAAACTACTCAA+AGG + chr3_4:44448973-44448992 Msa0502340:CDS 35.0%
TTCAGACATTAAAGATGAGC+TGG + chr3_4:44449011-44449030 Msa0502340:CDS 35.0%
TTTATCAGCATCCTTAAGGA+AGG - chr3_4:44449049-44449068 None:intergenic 35.0%
! CTCTTTTATCAGCATCCTTA+AGG - chr3_4:44449053-44449072 None:intergenic 35.0%
GATAAAAGAGCTGTAGCTAA+AGG + chr3_4:44449063-44449082 Msa0502340:CDS 35.0%
TGTCAAAATATGGGTGAAAC+AGG + chr3_4:44449104-44449123 Msa0502340:CDS 35.0%
AAATATGGGTGAAACAGGTT+AGG + chr3_4:44449109-44449128 Msa0502340:CDS 35.0%
AATATGGGTGAAACAGGTTA+GGG + chr3_4:44449110-44449129 Msa0502340:CDS 35.0%
TGATGATTATTTGATCCAGG+TGG + chr3_4:44449161-44449180 Msa0502340:CDS 35.0%
GATGATTATTTGATCCAGGT+GGG + chr3_4:44449162-44449181 Msa0502340:CDS 35.0%
GCGACAAGAAGTAAAAGATA+TGG + chr3_4:44449291-44449310 Msa0502340:CDS 35.0%
TTCCAACTTTATTCTGCAGT+AGG + chr3_4:44449315-44449334 Msa0502340:CDS 35.0%
ATCCTACTGCAGAATAAAGT+TGG - chr3_4:44449320-44449339 None:intergenic 35.0%
AAAAACTTTCTTGGCAAGAG+TGG - chr3_4:44449526-44449545 None:intergenic 35.0%
GAGAAACTTTGATCCATACA+CGG - chr3_4:44449584-44449603 None:intergenic 35.0%
TCCTCTGGATATCTCTATAA+TGG + chr3_4:44449662-44449681 Msa0502340:CDS 35.0%
TCCATTATAGAGATATCCAG+AGG - chr3_4:44449666-44449685 None:intergenic 35.0%
! TCGAGAGTCATTGATTAATG+AGG + chr3_4:44449686-44449705 Msa0502340:CDS 35.0%
! AGTCATTGATTAATGAGGTG+AGG + chr3_4:44449691-44449710 Msa0502340:CDS 35.0%
TTATCGTGTTCGATGATGTA+TGG + chr3_4:44449739-44449758 Msa0502340:CDS 35.0%
GCATTCCAATTTGACTATGA+TGG + chr3_4:44449942-44449961 Msa0502340:CDS 35.0%
!! TTTTGGAAGATATACCGATG+AGG - chr3_4:44449983-44450002 None:intergenic 35.0%
! TCTAAGTTTAGAGCTGAAAC+AGG + chr3_4:44450106-44450125 Msa0502340:CDS 35.0%
CAACTCACTTAAGTATCCTT+CGG - chr3_4:44450324-44450343 None:intergenic 35.0%
GTATCTTCAGCTAGAATTGA+TGG + chr3_4:44450365-44450384 Msa0502340:CDS 35.0%
CCATGAACAAGACAAGATTT+AGG - chr3_4:44450395-44450414 None:intergenic 35.0%
! CCTAAATCTTGTCTTGTTCA+TGG + chr3_4:44450392-44450411 Msa0502340:CDS 35.0%
TGCAAGCATATTAGTGAAGA+TGG + chr3_4:44450461-44450480 Msa0502340:CDS 35.0%
ACGTCGAACTGTTTCATTTA+AGG - chr3_4:44450495-44450514 None:intergenic 35.0%
GTACTTCCAATGCTTTAATG+GGG + chr3_4:44450528-44450547 Msa0502340:CDS 35.0%
ATTAAGCCCCATTAAAGCAT+TGG - chr3_4:44450537-44450556 None:intergenic 35.0%
AATGCTTTAATGGGGCTTAA+TGG + chr3_4:44450536-44450555 Msa0502340:CDS 35.0%
! TTAATGGATGCTCACATGTT+CGG + chr3_4:44450552-44450571 Msa0502340:CDS 35.0%
AATCACATGTAGACTTTGGT+AGG + chr3_4:44450600-44450619 Msa0502340:CDS 35.0%
ATTCGATTGAAGGACAACAT+TGG + chr3_4:44450887-44450906 Msa0502340:CDS 35.0%
GTAAAACTAATTGCAGAGCT+AGG + chr3_4:44450965-44450984 Msa0502340:CDS 35.0%
ATTGAAGCAGTTAAAGGGAT+TGG + chr3_4:44450991-44451010 Msa0502340:CDS 35.0%
TTGAAGCAGTTAAAGGGATT+GGG + chr3_4:44450992-44451011 Msa0502340:CDS 35.0%
GAGGAAAATAAAGTCATACC+AGG - chr3_4:44451040-44451059 None:intergenic 35.0%
AGCATAGTCAATGATAGAGA+GGG - chr3_4:44451308-44451327 None:intergenic 35.0%
AAGCATAGTCAATGATAGAG+AGG - chr3_4:44451309-44451328 None:intergenic 35.0%
AGTTTGCAATTCCAAAATGG+AGG + chr3_4:44451340-44451359 Msa0502340:CDS 35.0%
GTTTGCAATTCCAAAATGGA+GGG + chr3_4:44451341-44451360 Msa0502340:CDS 35.0%
TCAAGTTCTTCATTTGAGCA+AGG - chr3_4:44451390-44451409 None:intergenic 35.0%
! ACTGTTTTCACTCAAAAAGC+TGG + chr3_4:44451435-44451454 Msa0502340:CDS 35.0%
! AGCTTCAAGTTCTCAGTATT+TGG + chr3_4:44451515-44451534 Msa0502340:CDS 35.0%
! GCTTCAAGTTCTCAGTATTT+GGG + chr3_4:44451516-44451535 Msa0502340:CDS 35.0%
ATGCATGCTATATTTGTGCA+CGG + chr3_4:44451541-44451560 Msa0502340:CDS 35.0%
ATCTCCATCAATTTCTACGA+GGG - chr3_4:44451590-44451609 None:intergenic 35.0%
!! CCATGATGCTTGTATTTTGA+TGG - chr3_4:44451729-44451748 None:intergenic 35.0%
CCATCAAAATACAAGCATCA+TGG + chr3_4:44451726-44451745 Msa0502340:intron 35.0%
TGCAAGAAAATAGCTCTTGA+GGG - chr3_4:44451847-44451866 None:intergenic 35.0%
TTGCAAGAAAATAGCTCTTG+AGG - chr3_4:44451848-44451867 None:intergenic 35.0%
! TGACAATTCCGATTTTCCAA+AGG + chr3_4:44451952-44451971 Msa0502340:CDS 35.0%
! GACAATTCCGATTTTCCAAA+GGG + chr3_4:44451953-44451972 Msa0502340:CDS 35.0%
TTGGTTTCTTGGGTTAACAC+TGG - chr3_4:44448964-44448983 None:intergenic 40.0%
AAAGGAGACAAAAACGACGA+AGG + chr3_4:44449081-44449100 Msa0502340:CDS 40.0%
!! ACGACGAAGGTGTCAAAATA+TGG + chr3_4:44449094-44449113 Msa0502340:CDS 40.0%
!! CGACGAAGGTGTCAAAATAT+GGG + chr3_4:44449095-44449114 Msa0502340:CDS 40.0%
TTTGGCATTTAGGCTTACAG+TGG - chr3_4:44449352-44449371 None:intergenic 40.0%
CTGTAAGCCTAAATGCCAAA+TGG + chr3_4:44449352-44449371 Msa0502340:CDS 40.0%
!! TGTAAAGAGCAGCTAGTCTT+GGG - chr3_4:44449383-44449402 None:intergenic 40.0%
! ATGTAAAGAGCAGCTAGTCT+TGG - chr3_4:44449384-44449403 None:intergenic 40.0%
! AAGACTAGCTGCTCTTTACA+TGG + chr3_4:44449383-44449402 Msa0502340:CDS 40.0%
!! ATTGACTGACTGGTTGGTAA+AGG + chr3_4:44449446-44449465 Msa0502340:CDS 40.0%
!! TTGACTGACTGGTTGGTAAA+GGG + chr3_4:44449447-44449466 Msa0502340:CDS 40.0%
TGTCATATCTCTGGTAGCAA+TGG + chr3_4:44449485-44449504 Msa0502340:CDS 40.0%
GTCATATCTCTGGTAGCAAT+GGG + chr3_4:44449486-44449505 Msa0502340:CDS 40.0%
! ACTTTGAAGATTGCCGTGTA+TGG + chr3_4:44449568-44449587 Msa0502340:CDS 40.0%
AGGGATATGTTGTGCAAGTT+GGG + chr3_4:44449630-44449649 Msa0502340:CDS 40.0%
GCCGGATATTTATGACAACA+AGG + chr3_4:44449817-44449836 Msa0502340:CDS 40.0%
TGTTGTCCAAAAGACCTCAT+CGG + chr3_4:44449966-44449985 Msa0502340:CDS 40.0%
! GATATACCGATGAGGTCTTT+TGG - chr3_4:44449975-44449994 None:intergenic 40.0%
CCAATGACAACAATTGCTAG+CGG - chr3_4:44450029-44450048 None:intergenic 40.0%
GGAATATATCCAGATGGTTG+TGG + chr3_4:44450215-44450234 Msa0502340:CDS 40.0%
GATTTAACTCCACAACCATC+TGG - chr3_4:44450227-44450246 None:intergenic 40.0%
CGAAGAGACTAATTCGACAA+TGG + chr3_4:44450246-44450265 Msa0502340:CDS 40.0%
ATTCGACAATGGATAGCTGA+AGG + chr3_4:44450257-44450276 Msa0502340:CDS 40.0%
GATAGCTGAAGGATTTGTGA+AGG + chr3_4:44450268-44450287 Msa0502340:CDS 40.0%
!!! TAGATTTTGGAGCATGCCAA+TGG - chr3_4:44450768-44450787 None:intergenic 40.0%
! CATCCAAGGTCTCTAGATTT+TGG - chr3_4:44450781-44450800 None:intergenic 40.0%
TCTAGAGACCTTGGATGTAA+AGG + chr3_4:44450784-44450803 Msa0502340:CDS 40.0%
CTAGAGACCTTGGATGTAAA+GGG + chr3_4:44450785-44450804 Msa0502340:CDS 40.0%
! GATTGGGTTTGGTTCAAGTT+GGG + chr3_4:44451008-44451027 Msa0502340:CDS 40.0%
GTTGAATGAGATGCAACACT+TGG + chr3_4:44451060-44451079 Msa0502340:CDS 40.0%
! AGAATTTGAAGCATAGGTGC+AGG - chr3_4:44451151-44451170 None:intergenic 40.0%
!!! GTTTCTGAAACCCTCCATTT+TGG - chr3_4:44451354-44451373 None:intergenic 40.0%
!! TCTAAGTTCTGAATGCCAGT+GGG - chr3_4:44451493-44451512 None:intergenic 40.0%
TGCATGCTATATTTGTGCAC+GGG + chr3_4:44451542-44451561 Msa0502340:CDS 40.0%
TATATTTGTGCACGGGATTG+CGG + chr3_4:44451549-44451568 Msa0502340:CDS 40.0%
TCTCCATCAATTTCTACGAG+GGG - chr3_4:44451589-44451608 None:intergenic 40.0%
CATCTCCATCAATTTCTACG+AGG - chr3_4:44451591-44451610 None:intergenic 40.0%
!! TTGTTGTGATTTGGTAGGTG+CGG + chr3_4:44451917-44451936 Msa0502340:intron 40.0%
! CCAAAGTCCCTTTGGAAAAT+CGG - chr3_4:44451963-44451982 None:intergenic 40.0%
GGCAGAAATAGCAGTGTCTT+TGG + chr3_4:44448921-44448940 Msa0502340:CDS 45.0%
GCGAACACCTTTGAGTAGTT+TGG - chr3_4:44448983-44449002 None:intergenic 45.0%
GATACACATCCACGATTACG+AGG - chr3_4:44449195-44449214 None:intergenic 45.0%
! GGTCATGCCATTTGGCATTT+AGG - chr3_4:44449362-44449381 None:intergenic 45.0%
! TAGTCTTGGGTCATGCCATT+TGG - chr3_4:44449370-44449389 None:intergenic 45.0%
CAAGAGACGAATTGACTGAC+TGG + chr3_4:44449436-44449455 Msa0502340:CDS 45.0%
AGACGAATTGACTGACTGGT+TGG + chr3_4:44449440-44449459 Msa0502340:CDS 45.0%
ATATCTCTGGTAGCAATGGG+AGG + chr3_4:44449489-44449508 Msa0502340:CDS 45.0%
TATCTCTGGTAGCAATGGGA+GGG + chr3_4:44449490-44449509 Msa0502340:CDS 45.0%
GAGGGATATGTTGTGCAAGT+TGG + chr3_4:44449629-44449648 Msa0502340:CDS 45.0%
CCGCTAGCAATTGTTGTCAT+TGG + chr3_4:44450026-44450045 Msa0502340:CDS 45.0%
AGCTGAAGGATTTGTGAAGG+AGG + chr3_4:44450271-44450290 Msa0502340:CDS 45.0%
AGGATTTGTGAAGGAGGAAG+AGG + chr3_4:44450277-44450296 Msa0502340:CDS 45.0%
GGATTTGTGAAGGAGGAAGA+GGG + chr3_4:44450278-44450297 Msa0502340:CDS 45.0%
GATTTGTGAAGGAGGAAGAG+GGG + chr3_4:44450279-44450298 Msa0502340:CDS 45.0%
! ACTTTGGAAGAAGTTGCCGA+AGG + chr3_4:44450305-44450324 Msa0502340:CDS 45.0%
!! TGGAGCATGCCAATGGATTT+TGG - chr3_4:44450761-44450780 None:intergenic 45.0%
GCTCCAAAATCTAGAGACCT+TGG + chr3_4:44450775-44450794 Msa0502340:CDS 45.0%
ATGTGTGCCCTTTACATCCA+AGG - chr3_4:44450795-44450814 None:intergenic 45.0%
ACATGTTCGTGTGTTGCCAA+AGG + chr3_4:44450811-44450830 Msa0502340:CDS 45.0%
CGATTGAAGGACAACATTGG+AGG + chr3_4:44450890-44450909 Msa0502340:CDS 45.0%
GCAGTTAAAGGGATTGGGTT+TGG + chr3_4:44450997-44451016 Msa0502340:CDS 45.0%
! GGATTGGGTTTGGTTCAAGT+TGG + chr3_4:44451007-44451026 Msa0502340:CDS 45.0%
GTGTTGCATCTCATTCAACG+AGG - chr3_4:44451059-44451078 None:intergenic 45.0%
TGAAGCTTAGGAATCCACTC+TGG - chr3_4:44451202-44451221 None:intergenic 45.0%
CAATGATAGAGAGGGACAAC+AGG - chr3_4:44451300-44451319 None:intergenic 45.0%
! GTTACGAAGTGTTCCACAAC+TGG + chr3_4:44451459-44451478 Msa0502340:CDS 45.0%
!! CTCTAAGTTCTGAATGCCAG+TGG - chr3_4:44451494-44451513 None:intergenic 45.0%
GTTCCCCTCGTAGAAATTGA+TGG + chr3_4:44451583-44451602 Msa0502340:CDS 45.0%
! CCGATTTTCCAAAGGGACTT+TGG + chr3_4:44451960-44451979 Msa0502340:CDS 45.0%
GGGTTAACACTGGAAGCAGT+TGG - chr3_4:44448954-44448973 None:intergenic 50.0%
!! ACTACTCAAAGGTGTTCGCG+AGG + chr3_4:44448984-44449003 Msa0502340:CDS 50.0%
AAGCATCCACGCCTTCCTTA+AGG + chr3_4:44449035-44449054 Msa0502340:CDS 50.0%
GGACAACATCCTCGTAATCG+TGG + chr3_4:44449183-44449202 Msa0502340:CDS 50.0%
! TCATGTGCTATTCGACGACG+AGG - chr3_4:44449237-44449256 None:intergenic 50.0%
AGAGCGCACTGTCATATCTC+TGG + chr3_4:44449476-44449495 Msa0502340:CDS 50.0%
GTTGGGATGCACTAATCCTC+TGG + chr3_4:44449647-44449666 Msa0502340:CDS 50.0%
!! GTTCAAGTTGGGAGAGAACC+TGG + chr3_4:44451019-44451038 Msa0502340:CDS 50.0%
GGTTAGAGAAGTTGCCAGAG+TGG + chr3_4:44451185-44451204 Msa0502340:CDS 50.0%
! ACGAAGTGTTCCACAACTGG+AGG + chr3_4:44451462-44451481 Msa0502340:CDS 50.0%
! TCGAAGTGCCAAAGTCCCTT+TGG - chr3_4:44451971-44451990 None:intergenic 50.0%
CAGCATCCTTAAGGAAGGCG+TGG - chr3_4:44449044-44449063 None:intergenic 55.0%
TACGAGGATGTTGTCCCACC+TGG - chr3_4:44449179-44449198 None:intergenic 55.0%
GGAGGAAGAGGGGAAGACTT+TGG + chr3_4:44450289-44450308 Msa0502340:CDS 55.0%
GTGGGTACAACCTCCAGTTG+TGG - chr3_4:44451475-44451494 None:intergenic 55.0%
CAACTGGAGGTTGTACCCAC+TGG + chr3_4:44451475-44451494 Msa0502340:CDS 55.0%
TCTGGTAGCAATGGGAGGGC+AGG + chr3_4:44449494-44449513 Msa0502340:CDS 60.0%
CTGGTAGCAATGGGAGGGCA+GGG + chr3_4:44449495-44449514 Msa0502340:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 44448919 44452136 44448919 ID=Msa0502340;Name=Msa0502340
chr3_4 mRNA 44448919 44452136 44448919 ID=Msa0502340-mRNA-1;Parent=Msa0502340;Name=Msa0502340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0.5|1|0|0.5|2|135|925
chr3_4 exon 44448919 44451628 44448919 ID=Msa0502340-mRNA-1:exon:9484;Parent=Msa0502340-mRNA-1
chr3_4 exon 44451934 44452136 44451934 ID=Msa0502340-mRNA-1:exon:9485;Parent=Msa0502340-mRNA-1
chr3_4 CDS 44448919 44451628 44448919 ID=Msa0502340-mRNA-1:cds;Parent=Msa0502340-mRNA-1
chr3_4 CDS 44451934 44452001 44451934 ID=Msa0502340-mRNA-1:cds;Parent=Msa0502340-mRNA-1
chr3_4 three_prime_UTR 44452002 44452136 44452002 ID=Msa0502340-mRNA-1:three_prime_utr;Parent=Msa0502340-mRNA-1
Gene Sequence

>Msa0502340

ATGGCAGAAATAGCAGTGTCTTTGGCTATTGACCAACTGCTTCCAGTGTTAACCCAAGAAACCAAACTACTCAAAGGTGTTCGCGAGGAATTTTCAGACATTAAAGATGAGCTGGAAAGCATCCACGCCTTCCTTAAGGATGCTGATAAAAGAGCTGTAGCTAAAGGAGACAAAAACGACGAAGGTGTCAAAATATGGGTGAAACAGGTTAGGGAAGCAGCCTATCGCATAGAAGATATCATTGATGATTATTTGATCCAGGTGGGACAACATCCTCGTAATCGTGGATGTGTATCTTTACTCAAAACTATGGCTCCTCGTCGTCGAATAGCACATGAGATTCAAGATATTAAGTCATTCGTTTGTGAGATCGCGACAAGAAGTAAAAGATATGGCTTCCAACTTTATTCTGCAGTAGGATCAAACTGCTCCACTGTAAGCCTAAATGCCAAATGGCATGACCCAAGACTAGCTGCTCTTTACATGGACGAAGATGAAGTAATGTGCTTTGAAGATTCAAGAGACGAATTGACTGACTGGTTGGTAAAGGGAAGAGAAGAGCGCACTGTCATATCTCTGGTAGCAATGGGAGGGCAGGGAAAAACCACTCTTGCCAAGAAAGTTTTTGAAAGCAAGGAGATCATTAGACACTTTGAAGATTGCCGTGTATGGATCAAAGTTTCTCGATCATATACAGTAAAAAGACTATTGAGGGATATGTTGTGCAAGTTGGGATGCACTAATCCTCTGGATATCTCTATAATGGATCGAGAGTCATTGATTAATGAGGTGAGGAATTATTTGCAGCAAAAAAGGTATCTTATCGTGTTCGATGATGTATGGAATGTACATTTTTGGGATGATATTGAATTTGCTGTAATAGATAATAAAAAAAGAAGCCGGATATTTATGACAACAAGGAACATGAGTGTTGTCATGTCTTGTAAGAAATCTTCTTTTGTGAAAGTGCATGAACTGCAACCTTTAACTGAAGAACAATCTTTGAAGTTGTTTAATAAGAAGGCATTCCAATTTGACTATGATGGATGTTGTCCAAAAGACCTCATCGGTATATCTTCCAAAATTGTTAGAAAATGCAAGGGTTTACCGCTAGCAATTGTTGTCATTGGTAGTCTTTTATCTTCCAAAGAGAAAGATTTATTTGAATGGCAAATGTTTTGTGAAAATCTAAGTTTAGAGCTGAAACAGGATTCACATTTAATTGGGATAAAAAAAATTTTAGGTTACAGTTATGATGAGTTGCCATACAACCTTAAATCATGCTTGTTATATTTGGGAATATATCCAGATGGTTGTGGAGTTAAATCGAAGAGACTAATTCGACAATGGATAGCTGAAGGATTTGTGAAGGAGGAAGAGGGGAAGACTTTGGAAGAAGTTGCCGAAGGATACTTAAGTGAGTTGATTCATAGAAATTTAGTACAAGTATCTTCAGCTAGAATTGATGGAAAACCTAAATCTTGTCTTGTTCATGGTCGAATTCGTGAGATGATCCTTGAAAAGATTGATGATTTAGGCTTTTGCAAGCATATTAGTGAAGATGGACAGTCATCCTTAAATGAAACAGTTCGACGTCTATCGATAACAAGTACTTCCAATGCTTTAATGGGGCTTAATGGATGCTCACATGTTCGGTCACTGTTTATTTTTACAGATAAAGAATCACATGTAGACTTTGGTAGGAGAATCTTGACTAAATGCAAGTTGCTGAAAGTGCTTCATTTTGAAGATGCTCCACTGTTTAATATTCCTACAAATTTGGGAAGTTTGATCCACTTGAAGTATTTAAGGTTAAGGCATGGAAAGTTAGATAAACTTCCAAAATCCATTGGCATGCTCCAAAATCTAGAGACCTTGGATGTAAAGGGCACACATGTTCGTGTGTTGCCAAAGGAGATTAGTAAGCTTAAAAATCTACGACATCTTATCGGCTACCAATTATCTTTGATTCGATTGAAGGACAACATTGGAGGTATGAAATCCCTACAAACACTATTTTATGTTGATTTAAATGTGGATGGAGTAGTAAAACTAATTGCAGAGCTAGGAAAATTGAAGCAGTTAAAGGGATTGGGTTTGGTTCAAGTTGGGAGAGAACCTGGTATGACTTTATTTTCCTCGTTGAATGAGATGCAACACTTGGAGAAGCTAAATATTGAATCGCAATTGACAAGTAATGATGACATCATTGATTTGAATTTGATTTCACCTGCACCTATGCTTCAAATTCTTAGACTACATGCAAGGTTAGAGAAGTTGCCAGAGTGGATTCCTAAGCTTCAAAATGTTGTTCAATTGAAGTTGGCATTCTCCCATTTAAATGAAGATCCAATAAAATCACTACAAAGTTTGCAAAACCTGTTGTCCCTCTCTATCATTGACTATGCTTATGAAGGCGAAAGTTTGCAATTCCAAAATGGAGGGTTTCAGAAACTAAAAGAACTATTCCTTGCTCAAATGAAGAACTTGAATTCAATTGTTATCGAAAAAGGAGCACTGTTTTCACTCAAAAAGCTGGAGTTACGAAGTGTTCCACAACTGGAGGTTGTACCCACTGGCATTCAGAACTTAGAGAAGCTTCAAGTTCTCAGTATTTGGGATATGCATGCTATATTTGTGCACGGGATTGCGGTTGTCGAGCATGTTCCCCTCGTAGAAATTGATGGAGATGTCTTTCGACACTCAAGAAGTGCGGCTTCAAGTGCAATGACAATTCCGATTTTCCAAAGGGACTTTGGCACTTCGATTACTCTGTAA

Protein sequence

>Msa0502340

MAEIAVSLAIDQLLPVLTQETKLLKGVREEFSDIKDELESIHAFLKDADKRAVAKGDKNDEGVKIWVKQVREAAYRIEDIIDDYLIQVGQHPRNRGCVSLLKTMAPRRRIAHEIQDIKSFVCEIATRSKRYGFQLYSAVGSNCSTVSLNAKWHDPRLAALYMDEDEVMCFEDSRDELTDWLVKGREERTVISLVAMGGQGKTTLAKKVFESKEIIRHFEDCRVWIKVSRSYTVKRLLRDMLCKLGCTNPLDISIMDRESLINEVRNYLQQKRYLIVFDDVWNVHFWDDIEFAVIDNKKRSRIFMTTRNMSVVMSCKKSSFVKVHELQPLTEEQSLKLFNKKAFQFDYDGCCPKDLIGISSKIVRKCKGLPLAIVVIGSLLSSKEKDLFEWQMFCENLSLELKQDSHLIGIKKILGYSYDELPYNLKSCLLYLGIYPDGCGVKSKRLIRQWIAEGFVKEEEGKTLEEVAEGYLSELIHRNLVQVSSARIDGKPKSCLVHGRIREMILEKIDDLGFCKHISEDGQSSLNETVRRLSITSTSNALMGLNGCSHVRSLFIFTDKESHVDFGRRILTKCKLLKVLHFEDAPLFNIPTNLGSLIHLKYLRLRHGKLDKLPKSIGMLQNLETLDVKGTHVRVLPKEISKLKNLRHLIGYQLSLIRLKDNIGGMKSLQTLFYVDLNVDGVVKLIAELGKLKQLKGLGLVQVGREPGMTLFSSLNEMQHLEKLNIESQLTSNDDIIDLNLISPAPMLQILRLHARLEKLPEWIPKLQNVVQLKLAFSHLNEDPIKSLQSLQNLLSLSIIDYAYEGESLQFQNGGFQKLKELFLAQMKNLNSIVIEKGALFSLKKLELRSVPQLEVVPTGIQNLEKLQVLSIWDMHAIFVHGIAVVEHVPLVEIDGDVFRHSRSAASSAMTIPIFQRDFGTSITL*