Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293040 | XP_013464448.2 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 6.13e-78 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293040 | sp|P52409|E13B_WHEAT | 44.828 | 87 | 48 | 0 | 26 | 112 | 373 | 459 | 3.57e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293040 | I3SE25 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 2.93e-78 | 235 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0293040 | 0.811308 | 7.469652e-51 | -8.615850e-47 |
| Msa0014770 | Msa0293040 | 0.861011 | 1.383766e-63 | -8.615850e-47 |
| Msa0016040 | Msa0293040 | 0.805208 | 1.491223e-49 | -8.615850e-47 |
| Msa0020540 | Msa0293040 | 0.801471 | 8.866882e-49 | -8.615850e-47 |
| Msa0025160 | Msa0293040 | 0.812986 | 3.217047e-51 | -8.615850e-47 |
| Msa0025580 | Msa0293040 | 0.826989 | 2.003926e-54 | -8.615850e-47 |
| Msa0032460 | Msa0293040 | 0.832440 | 9.440219e-56 | -8.615850e-47 |
| Msa0032980 | Msa0293040 | 0.837448 | 5.168634e-57 | -8.615850e-47 |
| Msa0033780 | Msa0293040 | 0.806309 | 8.758205e-50 | -8.615850e-47 |
| Msa0035340 | Msa0293040 | 0.807945 | 3.944480e-50 | -8.615850e-47 |
| Msa0035380 | Msa0293040 | 0.806585 | 7.657953e-50 | -8.615850e-47 |
| Msa0037740 | Msa0293040 | 0.831240 | 1.867230e-55 | -8.615850e-47 |
| Msa0048510 | Msa0293040 | 0.806019 | 1.007847e-49 | -8.615850e-47 |
| Msa0050660 | Msa0293040 | 0.818664 | 1.741816e-52 | -8.615850e-47 |
| Msa0050700 | Msa0293040 | 0.818498 | 1.899987e-52 | -8.615850e-47 |
| Msa0050790 | Msa0293040 | 0.816808 | 4.569969e-52 | -8.615850e-47 |
| Msa0053070 | Msa0293040 | 0.812884 | 3.386393e-51 | -8.615850e-47 |
| Msa0062340 | Msa0293040 | 0.821754 | 3.412900e-53 | -8.615850e-47 |
| Msa0067330 | Msa0293040 | 0.813702 | 2.239331e-51 | -8.615850e-47 |
| Msa0073120 | Msa0293040 | 0.809121 | 2.212254e-50 | -8.615850e-47 |
| Msa0077560 | Msa0293040 | 0.823968 | 1.040900e-53 | -8.615850e-47 |
| Msa0080610 | Msa0293040 | 0.807621 | 4.623293e-50 | -8.615850e-47 |
| Msa0090400 | Msa0293040 | 0.805408 | 1.354437e-49 | -8.615850e-47 |
| Msa0091350 | Msa0293040 | 0.808595 | 2.866755e-50 | -8.615850e-47 |
| Msa0094780 | Msa0293040 | 0.800921 | 1.148636e-48 | -8.615850e-47 |
| Msa0098410 | Msa0293040 | 0.802319 | 5.935904e-49 | -8.615850e-47 |
| Msa0110200 | Msa0293040 | 0.803948 | 2.731733e-49 | -8.615850e-47 |
| Msa0113340 | Msa0293040 | 0.815345 | 9.693701e-52 | -8.615850e-47 |
| Msa0115550 | Msa0293040 | 0.857310 | 1.781397e-62 | -8.615850e-47 |
| Msa0120790 | Msa0293040 | 0.806426 | 8.273545e-50 | -8.615850e-47 |
| Msa0121330 | Msa0293040 | 0.818349 | 2.053562e-52 | -8.615850e-47 |
| Msa0126210 | Msa0293040 | 0.841158 | 5.629692e-58 | -8.615850e-47 |
| Msa0137880 | Msa0293040 | 0.810228 | 1.279212e-50 | -8.615850e-47 |
| Msa0140280 | Msa0293040 | 0.857116 | 2.032391e-62 | -8.615850e-47 |
| Msa0140380 | Msa0293040 | 0.802054 | 6.731337e-49 | -8.615850e-47 |
| Msa0145060 | Msa0293040 | 0.814807 | 1.276766e-51 | -8.615850e-47 |
| Msa0146650 | Msa0293040 | 0.818744 | 1.670855e-52 | -8.615850e-47 |
| Msa0154620 | Msa0293040 | 0.836798 | 7.575976e-57 | -8.615850e-47 |
| Msa0158860 | Msa0293040 | 0.812118 | 4.979481e-51 | -8.615850e-47 |
| Msa0161930 | Msa0293040 | 0.817313 | 3.518807e-52 | -8.615850e-47 |
| Msa0165830 | Msa0293040 | 0.814867 | 1.237858e-51 | -8.615850e-47 |
| Msa0166170 | Msa0293040 | 0.826951 | 2.046101e-54 | -8.615850e-47 |
| Msa0174650 | Msa0293040 | 0.801485 | 8.805996e-49 | -8.615850e-47 |
| Msa0190730 | Msa0293040 | 0.804471 | 2.126260e-49 | -8.615850e-47 |
| Msa0200050 | Msa0293040 | 0.819618 | 1.056384e-52 | -8.615850e-47 |
| Msa0213610 | Msa0293040 | 0.974938 | 4.799638e-139 | -8.615850e-47 |
| Msa0222560 | Msa0293040 | 0.812122 | 4.969211e-51 | -8.615850e-47 |
| Msa0232760 | Msa0293040 | 0.811677 | 6.212813e-51 | -8.615850e-47 |
| Msa0233020 | Msa0293040 | 0.806060 | 9.879376e-50 | -8.615850e-47 |
| Msa0233070 | Msa0293040 | 0.825459 | 4.635064e-54 | -8.615850e-47 |
| Msa0269210 | Msa0293040 | 0.803369 | 3.601933e-49 | -8.615850e-47 |
| Msa0293040 | Msa0301820 | 0.810747 | 9.883725e-51 | -8.615850e-47 |
| Msa0293040 | Msa0307280 | 0.805525 | 1.280206e-49 | -8.615850e-47 |
| Msa0293040 | Msa0367520 | 0.846747 | 1.788979e-59 | -8.615850e-47 |
| Msa0293040 | Msa0373590 | 0.817520 | 3.160576e-52 | -8.615850e-47 |
| Msa0293040 | Msa0380670 | 0.861478 | 9.972087e-64 | -8.615850e-47 |
| Msa0293040 | Msa0381730 | 0.806263 | 8.956690e-50 | -8.615850e-47 |
| Msa0293040 | Msa0383000 | 0.811109 | 8.251899e-51 | -8.615850e-47 |
| Msa0293040 | Msa0390970 | 0.814081 | 1.847026e-51 | -8.615850e-47 |
| Msa0293040 | Msa0419540 | 0.815656 | 8.268157e-52 | -8.615850e-47 |
| Msa0293040 | Msa0421750 | 0.802163 | 6.390887e-49 | -8.615850e-47 |
| Msa0293040 | Msa0426530 | 0.831746 | 1.401279e-55 | -8.615850e-47 |
| Msa0293040 | Msa0430300 | 0.851126 | 1.087465e-60 | -8.615850e-47 |
| Msa0293040 | Msa0430480 | 0.815207 | 1.040656e-51 | -8.615850e-47 |
| Msa0293040 | Msa0431200 | 0.825943 | 3.558218e-54 | -8.615850e-47 |
| Msa0293040 | Msa0432010 | 0.820678 | 6.042819e-53 | -8.615850e-47 |
| Msa0293040 | Msa0433150 | 0.806273 | 8.909563e-50 | -8.615850e-47 |
| Msa0293040 | Msa0443570 | 0.812974 | 3.236516e-51 | -8.615850e-47 |
| Msa0293040 | Msa0447870 | 0.813260 | 2.801256e-51 | -8.615850e-47 |
| Msa0293040 | Msa0466880 | 0.805529 | 1.277274e-49 | -8.615850e-47 |
| Msa0293040 | Msa0468700 | 0.820797 | 5.674120e-53 | -8.615850e-47 |
| Msa0293040 | Msa0476280 | 0.835013 | 2.148394e-56 | -8.615850e-47 |
| Msa0293040 | Msa0481140 | 0.810015 | 1.422326e-50 | -8.615850e-47 |
| Msa0293040 | Msa0481890 | 0.826778 | 2.250876e-54 | -8.615850e-47 |
| Msa0293040 | Msa0483910 | 0.843196 | 1.625310e-58 | -8.615850e-47 |
| Msa0293040 | Msa0484570 | 0.994798 | 2.668106e-210 | -8.615850e-47 |
| Msa0293040 | Msa0495300 | 0.812585 | 3.936879e-51 | -8.615850e-47 |
| Msa0293040 | Msa0514580 | 0.834370 | 3.118177e-56 | -8.615850e-47 |
| Msa0293040 | Msa0517250 | 0.839261 | 1.760955e-57 | -8.615850e-47 |
| Msa0293040 | Msa0520260 | 0.834947 | 2.231862e-56 | -8.615850e-47 |
| Msa0293040 | Msa0520870 | 0.811569 | 6.558004e-51 | -8.615850e-47 |
| Msa0293040 | Msa0550590 | 0.800678 | 1.287602e-48 | -8.615850e-47 |
| Msa0293040 | Msa0553750 | 0.852838 | 3.549449e-61 | -8.615850e-47 |
| Msa0293040 | Msa0561560 | 0.823268 | 1.518145e-53 | -8.615850e-47 |
| Msa0293040 | Msa0563940 | 0.811926 | 5.483795e-51 | -8.615850e-47 |
| Msa0293040 | Msa0567170 | 0.837250 | 5.807085e-57 | -8.615850e-47 |
| Msa0293040 | Msa0571620 | 0.822196 | 2.695775e-53 | -8.615850e-47 |
| Msa0293040 | Msa0580370 | 0.802867 | 4.576219e-49 | -8.615850e-47 |
| Msa0293040 | Msa0590200 | 0.836577 | 8.622991e-57 | -8.615850e-47 |
| Msa0293040 | Msa0606100 | 0.838946 | 2.125380e-57 | -8.615850e-47 |
| Msa0293040 | Msa0607800 | 0.867631 | 1.186904e-65 | -8.615850e-47 |
| Msa0293040 | Msa0619080 | 0.800970 | 1.122408e-48 | -8.615850e-47 |
| Msa0293040 | Msa0620500 | 0.812565 | 3.977325e-51 | -8.615850e-47 |
| Msa0293040 | Msa0621710 | 0.833228 | 6.014838e-56 | -8.615850e-47 |
| Msa0293040 | Msa0647050 | 0.834315 | 3.218231e-56 | -8.615850e-47 |
| Msa0293040 | Msa0648040 | 0.864434 | 1.219536e-64 | -8.615850e-47 |
| Msa0293040 | Msa0654740 | 0.811018 | 8.634558e-51 | -8.615850e-47 |
| Msa0293040 | Msa0658640 | 0.831219 | 1.889932e-55 | -8.615850e-47 |
| Msa0293040 | Msa0668900 | 0.820724 | 5.896960e-53 | -8.615850e-47 |
| Msa0293040 | Msa0687090 | 0.847151 | 1.386224e-59 | -8.615850e-47 |
| Msa0293040 | Msa0688380 | 0.839830 | 1.252668e-57 | -8.615850e-47 |
| Msa0293040 | Msa0690740 | 0.866985 | 1.910371e-65 | -8.615850e-47 |
| Msa0293040 | Msa0698730 | 0.840385 | 8.979283e-58 | -8.615850e-47 |
| Msa0293040 | Msa0700460 | 0.824829 | 6.527964e-54 | -8.615850e-47 |
| Msa0293040 | Msa0703600 | 0.846005 | 2.849217e-59 | -8.615850e-47 |
| Msa0293040 | Msa0709200 | 0.843515 | 1.336381e-58 | -8.615850e-47 |
| Msa0293040 | Msa0709440 | 0.826200 | 3.091326e-54 | -8.615850e-47 |
| Msa0293040 | Msa0714520 | 0.822404 | 2.411937e-53 | -8.615850e-47 |
| Msa0293040 | Msa0735780 | 0.809847 | 1.545831e-50 | -8.615850e-47 |
| Msa0293040 | Msa0736890 | 0.801051 | 1.080540e-48 | -8.615850e-47 |
| Msa0293040 | Msa0743440 | 0.836731 | 7.878489e-57 | -8.615850e-47 |
| Msa0293040 | Msa0745720 | 0.836662 | 8.206163e-57 | -8.615850e-47 |
| Msa0293040 | Msa0747740 | 0.817728 | 2.836441e-52 | -8.615850e-47 |
| Msa0293040 | Msa0754430 | 0.820622 | 6.224238e-53 | -8.615850e-47 |
| Msa0293040 | Msa0755760 | 0.813253 | 2.811216e-51 | -8.615850e-47 |
| Msa0293040 | Msa0756180 | 0.802717 | 4.913220e-49 | -8.615850e-47 |
| Msa0293040 | Msa0756820 | 0.801983 | 6.959826e-49 | -8.615850e-47 |
| Msa0293040 | Msa0757100 | 0.820759 | 5.787131e-53 | -8.615850e-47 |
| Msa0293040 | Msa0758650 | 0.832176 | 1.097719e-55 | -8.615850e-47 |
| Msa0293040 | Msa0773630 | 0.848154 | 7.343267e-60 | -8.615850e-47 |
| Msa0293040 | Msa0778550 | 0.818070 | 2.374792e-52 | -8.615850e-47 |
| Msa0293040 | Msa0780910 | 0.819263 | 1.273302e-52 | -8.615850e-47 |
| Msa0293040 | Msa0783930 | 0.816742 | 4.727832e-52 | -8.615850e-47 |
| Msa0293040 | Msa0787590 | 0.805916 | 1.059584e-49 | -8.615850e-47 |
| Msa0293040 | Msa0795870 | 0.804788 | 1.825651e-49 | -8.615850e-47 |
| Msa0293040 | Msa0798080 | 0.806024 | 1.005506e-49 | -8.615850e-47 |
| Msa0293040 | Msa0805680 | 0.812204 | 4.768355e-51 | -8.615850e-47 |
| Msa0293040 | Msa0811690 | 0.800477 | 1.415210e-48 | -8.615850e-47 |
| Msa0293040 | Msa0815920 | 0.810679 | 1.022378e-50 | -8.615850e-47 |
| Msa0293040 | Msa0818880 | 0.858380 | 8.569659e-63 | -8.615850e-47 |
| Msa0293040 | Msa0821160 | 0.805482 | 1.306693e-49 | -8.615850e-47 |
| Msa0293040 | Msa0824450 | 0.846097 | 2.689440e-59 | -8.615850e-47 |
| Msa0293040 | Msa0836330 | 0.805441 | 1.332706e-49 | -8.615850e-47 |
| Msa0293040 | Msa0838750 | 0.817677 | 2.913006e-52 | -8.615850e-47 |
| Msa0293040 | Msa0843050 | 0.814545 | 1.459220e-51 | -8.615850e-47 |
| Msa0293040 | Msa0855230 | 0.806293 | 8.826118e-50 | -8.615850e-47 |
| Msa0293040 | Msa0863620 | 0.869157 | 3.820987e-66 | -8.615850e-47 |
| Msa0293040 | Msa0867110 | 0.837203 | 5.968916e-57 | -8.615850e-47 |
| Msa0293040 | Msa0900760 | 0.818365 | 2.035997e-52 | -8.615850e-47 |
| Msa0293040 | Msa0909760 | 0.830837 | 2.345573e-55 | -8.615850e-47 |
| Msa0293040 | Msa0931590 | 0.832442 | 9.430962e-56 | -8.615850e-47 |
| Msa0293040 | Msa0966320 | 0.809557 | 1.784473e-50 | -8.615850e-47 |
| Msa0293040 | Msa0966480 | 0.812836 | 3.470209e-51 | -8.615850e-47 |
| Msa0293040 | Msa0981320 | 0.812660 | 3.790645e-51 | -8.615850e-47 |
| Msa0293040 | Msa0997920 | 0.800763 | 1.237184e-48 | -8.615850e-47 |
| Msa0293040 | Msa1003740 | 0.828923 | 6.862154e-55 | -8.615850e-47 |
| Msa0293040 | Msa1003800 | 0.843053 | 1.774613e-58 | -8.615850e-47 |
| Msa0293040 | Msa1003930 | 0.828630 | 8.077745e-55 | -8.615850e-47 |
| Msa0293040 | Msa1021590 | 0.810560 | 1.085064e-50 | -8.615850e-47 |
| Msa0293040 | Msa1033920 | 0.827019 | 1.970666e-54 | -8.615850e-47 |
| Msa0293040 | Msa1035610 | 0.813782 | 2.150285e-51 | -8.615850e-47 |
| Msa0293040 | Msa1039220 | 0.818081 | 2.361185e-52 | -8.615850e-47 |
| Msa0293040 | Msa1042160 | 0.873365 | 1.556252e-67 | -8.615850e-47 |
| Msa0293040 | Msa1042190 | 0.869071 | 4.074792e-66 | -8.615850e-47 |
| Msa0293040 | Msa1042880 | 0.859300 | 4.551600e-63 | -8.615850e-47 |
| Msa0293040 | Msa1056830 | 0.810020 | 1.418606e-50 | -8.615850e-47 |
| Msa0293040 | Msa1059020 | 0.824798 | 6.639757e-54 | -8.615850e-47 |
| Msa0293040 | Msa1072960 | 0.806821 | 6.829329e-50 | -8.615850e-47 |
| Msa0293040 | Msa1075520 | 0.826762 | 2.270450e-54 | -8.615850e-47 |
| Msa0293040 | Msa1076020 | 0.813053 | 3.109653e-51 | -8.615850e-47 |
| Msa0293040 | Msa1078880 | 0.830016 | 3.722575e-55 | -8.615850e-47 |
| Msa0293040 | Msa1078970 | 0.835636 | 1.495403e-56 | -8.615850e-47 |
| Msa0293040 | Msa1080000 | 0.860655 | 1.775487e-63 | -8.615850e-47 |
| Msa0293040 | Msa1084530 | 0.836680 | 8.120429e-57 | -8.615850e-47 |
| Msa0293040 | Msa1104110 | 0.818734 | 1.679416e-52 | -8.615850e-47 |
| Msa0293040 | Msa1116660 | 0.813831 | 2.097204e-51 | -8.615850e-47 |
| Msa0293040 | Msa1123210 | 0.831817 | 1.346136e-55 | -8.615850e-47 |
| Msa0293040 | Msa1125820 | 0.834007 | 3.845075e-56 | -8.615850e-47 |
| Msa0293040 | Msa1125990 | 0.829179 | 5.950139e-55 | -8.615850e-47 |
| Msa0293040 | Msa1127280 | 0.815725 | 7.981244e-52 | -8.615850e-47 |
| Msa0293040 | Msa1127470 | 0.841933 | 3.516967e-58 | -8.615850e-47 |
| Msa0293040 | Msa1130420 | 0.807272 | 5.481121e-50 | -8.615850e-47 |
| Msa0293040 | Msa1132530 | 0.858678 | 6.985798e-63 | -8.615850e-47 |
| Msa0293040 | Msa1132840 | 0.801067 | 1.072506e-48 | -8.615850e-47 |
| Msa0293040 | Msa1139050 | 0.809402 | 1.926502e-50 | -8.615850e-47 |
| Msa0293040 | Msa1160910 | 0.822140 | 2.777361e-53 | -8.615850e-47 |
| Msa0293040 | Msa1162880 | 0.808634 | 2.812236e-50 | -8.615850e-47 |
| Msa0293040 | Msa1165480 | 0.816529 | 5.276777e-52 | -8.615850e-47 |
| Msa0293040 | Msa1167470 | 0.874793 | 5.117139e-68 | -8.615850e-47 |
| Msa0293040 | Msa1169190 | 0.834602 | 2.725364e-56 | -8.615850e-47 |
| Msa0293040 | Msa1171290 | 0.824157 | 9.395226e-54 | -8.615850e-47 |
| Msa0293040 | Msa1174670 | 0.820029 | 8.511711e-53 | -8.615850e-47 |
| Msa0293040 | Msa1186520 | 0.813628 | 2.324417e-51 | -8.615850e-47 |
| Msa0293040 | Msa1201540 | 0.805929 | 1.053058e-49 | -8.615850e-47 |
| Msa0293040 | Msa1201780 | 0.833583 | 4.906750e-56 | -8.615850e-47 |
| Msa0293040 | Msa1213830 | 0.842617 | 2.317435e-58 | -8.615850e-47 |
| Msa0293040 | Msa1214350 | 0.845890 | 3.062307e-59 | -8.615850e-47 |
| Msa0293040 | Msa1215870 | 0.813122 | 3.002829e-51 | -8.615850e-47 |
| Msa0293040 | Msa1215980 | 0.812817 | 3.502237e-51 | -8.615850e-47 |
| Msa0293040 | Msa1216090 | 0.828734 | 7.626472e-55 | -8.615850e-47 |
| Msa0293040 | Msa1217230 | 0.804692 | 1.912249e-49 | -8.615850e-47 |
| Msa0293040 | Msa1217910 | 0.820225 | 7.675809e-53 | -8.615850e-47 |
| Msa0293040 | Msa1218820 | 0.801276 | 9.720387e-49 | -8.615850e-47 |
| Msa0293040 | Msa1223390 | 0.804359 | 2.243220e-49 | -8.615850e-47 |
| Msa0293040 | Msa1226520 | 0.832476 | 9.252524e-56 | -8.615850e-47 |
| Msa0293040 | Msa1234870 | 0.808321 | 3.279703e-50 | -8.615850e-47 |
| Msa0293040 | Msa1240770 | 0.856571 | 2.940060e-62 | -8.615850e-47 |
| Msa0293040 | Msa1244240 | 0.839734 | 1.326837e-57 | -8.615850e-47 |
| Msa0293040 | Msa1254540 | 0.831767 | 1.385227e-55 | -8.615850e-47 |
| Msa0293040 | Msa1261050 | 0.804610 | 1.989047e-49 | -8.615850e-47 |
| Msa0293040 | Msa1262570 | 0.808057 | 3.733857e-50 | -8.615850e-47 |
| Msa0293040 | Msa1263740 | 0.810855 | 9.365409e-51 | -8.615850e-47 |
| Msa0293040 | Msa1263780 | 0.829293 | 5.581553e-55 | -8.615850e-47 |
| Msa0293040 | Msa1279150 | 0.848517 | 5.829004e-60 | -8.615850e-47 |
| Msa0293040 | Msa1282260 | 0.816835 | 4.506598e-52 | -8.615850e-47 |
| Msa0293040 | Msa1294790 | 0.802955 | 4.388284e-49 | -8.615850e-47 |
| Msa0293040 | Msa1300460 | 0.831948 | 1.249483e-55 | -8.615850e-47 |
| Msa0293040 | Msa1306570 | 0.829725 | 4.382360e-55 | -8.615850e-47 |
| Msa0293040 | Msa1315130 | 0.810620 | 1.052797e-50 | -8.615850e-47 |
| Msa0293040 | Msa1315160 | 0.811319 | 7.431051e-51 | -8.615850e-47 |
| Msa0293040 | Msa1321530 | 0.833286 | 5.820570e-56 | -8.615850e-47 |
| Msa0293040 | Msa1332950 | 0.808547 | 2.936195e-50 | -8.615850e-47 |
| Msa0293040 | Msa1339170 | 0.822365 | 2.463053e-53 | -8.615850e-47 |
| Msa0293040 | Msa1359690 | 0.802283 | 6.039360e-49 | -8.615850e-47 |
| Msa0293040 | Msa1359980 | 0.807452 | 5.020701e-50 | -8.615850e-47 |
| Msa0293040 | Msa1362130 | 0.842133 | 3.115104e-58 | -8.615850e-47 |
| Msa0293040 | Msa1364680 | 0.806173 | 9.352749e-50 | -8.615850e-47 |
| Msa0293040 | Msa1366150 | 0.807110 | 5.933244e-50 | -8.615850e-47 |
| Msa0293040 | Msa1368750 | 0.822686 | 2.074365e-53 | -8.615850e-47 |
| Msa0293040 | Msa1374790 | 0.829550 | 4.834247e-55 | -8.615850e-47 |
| Msa0293040 | Msa1375350 | 0.829864 | 4.053963e-55 | -8.615850e-47 |
| Msa0293040 | Msa1381180 | 0.820649 | 6.136549e-53 | -8.615850e-47 |
| Msa0293040 | Msa1383310 | 0.816770 | 4.659468e-52 | -8.615850e-47 |
| Msa0293040 | Msa1384150 | 0.809229 | 2.098237e-50 | -8.615850e-47 |
| Msa0293040 | Msa1393780 | 0.834655 | 2.642841e-56 | -8.615850e-47 |
| Msa0293040 | Msa1409410 | 0.858314 | 8.972388e-63 | -8.615850e-47 |
| Msa0293040 | Msa1411790 | 0.805409 | 1.353612e-49 | -8.615850e-47 |
| Msa0293040 | Msa1426320 | 0.806514 | 7.927328e-50 | -8.615850e-47 |
| Msa0293040 | Msa1429070 | 0.801622 | 8.255368e-49 | -8.615850e-47 |
| Msa0293040 | Msa1431480 | 0.804696 | 1.908337e-49 | -8.615850e-47 |
| Msa0293040 | Msa1440630 | 0.814885 | 1.226487e-51 | -8.615850e-47 |
| Msa0293040 | Msa1445120 | 0.831631 | 1.496355e-55 | -8.615850e-47 |
| Msa0293040 | Msa1450190 | 0.811995 | 5.296693e-51 | -8.615850e-47 |
| Msa0293040 | Msa1451820 | 0.830953 | 2.196141e-55 | -8.615850e-47 |
| Msa0293040 | Msa1462490 | 0.815551 | 8.726623e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293040 | MtrunA17_Chr2g0313891 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 5.63e-82 | 235 |
| Msa0293040 | MtrunA17_Chr8g0378371 | 41.880 | 117 | 59 | 4 | 1 | 112 | 1 | 113 | 4.04e-23 | 86.3 |
| Msa0293040 | MtrunA17_Chr8g0381081 | 42.268 | 97 | 53 | 2 | 19 | 113 | 47 | 142 | 3.61e-22 | 85.5 |
| Msa0293040 | MtrunA17_Chr7g0223961 | 48.193 | 83 | 42 | 1 | 29 | 110 | 364 | 446 | 2.12e-21 | 87.4 |
| Msa0293040 | MtrunA17_Chr8g0378381 | 44.565 | 92 | 50 | 1 | 22 | 112 | 24 | 115 | 7.97e-21 | 80.5 |
| Msa0293040 | MtrunA17_Chr1g0154991 | 40.449 | 89 | 52 | 1 | 25 | 112 | 15 | 103 | 7.96e-19 | 75.1 |
| Msa0293040 | MtrunA17_Chr1g0193131 | 45.161 | 93 | 48 | 3 | 17 | 108 | 408 | 498 | 5.31e-18 | 78.2 |
| Msa0293040 | MtrunA17_Chr6g0487261 | 41.758 | 91 | 49 | 2 | 25 | 112 | 365 | 454 | 7.05e-18 | 77.8 |
| Msa0293040 | MtrunA17_Chr4g0043511 | 39.535 | 86 | 51 | 1 | 28 | 112 | 418 | 503 | 1.26e-17 | 77.0 |
| Msa0293040 | MtrunA17_Chr3g0144531 | 41.176 | 85 | 49 | 1 | 30 | 113 | 371 | 455 | 2.65e-17 | 75.9 |
| Msa0293040 | MtrunA17_Chr8g0378401 | 40.860 | 93 | 54 | 1 | 22 | 113 | 24 | 116 | 2.99e-17 | 71.6 |
| Msa0293040 | MtrunA17_Chr3g0121271 | 37.374 | 99 | 60 | 1 | 17 | 113 | 349 | 447 | 4.37e-17 | 75.5 |
| Msa0293040 | MtrunA17_Chr1g0161011 | 36.634 | 101 | 60 | 2 | 17 | 113 | 346 | 446 | 6.46e-17 | 75.1 |
| Msa0293040 | MtrunA17_Chr8g0378361 | 36.607 | 112 | 63 | 3 | 5 | 112 | 6 | 113 | 8.25e-17 | 72.0 |
| Msa0293040 | MtrunA17_Chr2g0306311 | 43.529 | 85 | 46 | 2 | 27 | 110 | 396 | 479 | 9.50e-17 | 74.3 |
| Msa0293040 | MtrunA17_Chr4g0034901 | 40.000 | 85 | 49 | 1 | 30 | 112 | 375 | 459 | 1.07e-16 | 74.3 |
| Msa0293040 | MtrunA17_Chr7g0271411 | 45.882 | 85 | 43 | 2 | 30 | 112 | 160 | 243 | 1.22e-16 | 73.6 |
| Msa0293040 | MtrunA17_Chr1g0177171 | 40.206 | 97 | 55 | 2 | 17 | 110 | 392 | 488 | 1.38e-16 | 73.9 |
| Msa0293040 | MtrunA17_Chr5g0434591 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 1.56e-16 | 73.9 |
| Msa0293040 | MtrunA17_Chr8g0389741 | 35.294 | 102 | 63 | 2 | 13 | 112 | 352 | 452 | 2.14e-16 | 73.6 |
| Msa0293040 | MtrunA17_Chr4g0075031 | 39.080 | 87 | 51 | 1 | 28 | 112 | 380 | 466 | 5.59e-16 | 72.4 |
| Msa0293040 | MtrunA17_Chr3g0110371 | 36.000 | 100 | 60 | 2 | 17 | 112 | 346 | 445 | 8.90e-16 | 71.6 |
| Msa0293040 | MtrunA17_Chr5g0447651 | 32.432 | 111 | 67 | 2 | 4 | 112 | 10 | 114 | 4.69e-15 | 65.9 |
| Msa0293040 | MtrunA17_Chr5g0443331 | 37.895 | 95 | 56 | 2 | 20 | 112 | 98 | 191 | 5.59e-15 | 68.6 |
| Msa0293040 | MtrunA17_Chr4g0061401 | 41.667 | 84 | 47 | 2 | 30 | 112 | 24 | 106 | 1.14e-14 | 67.0 |
| Msa0293040 | MtrunA17_Chr3g0096451 | 37.363 | 91 | 54 | 2 | 24 | 112 | 106 | 195 | 1.37e-14 | 67.4 |
| Msa0293040 | MtrunA17_Chr4g0040911 | 37.500 | 88 | 53 | 1 | 27 | 112 | 34 | 121 | 1.72e-14 | 65.9 |
| Msa0293040 | MtrunA17_Chr5g0401301 | 39.326 | 89 | 51 | 1 | 27 | 112 | 326 | 414 | 5.22e-14 | 66.6 |
| Msa0293040 | MtrunA17_Chr3g0120401 | 36.905 | 84 | 52 | 1 | 30 | 112 | 157 | 240 | 8.36e-14 | 65.1 |
| Msa0293040 | MtrunA17_Chr8g0339191 | 36.264 | 91 | 48 | 3 | 28 | 112 | 372 | 458 | 1.21e-13 | 65.5 |
| Msa0293040 | MtrunA17_Chr1g0213651 | 38.095 | 84 | 51 | 1 | 30 | 112 | 276 | 359 | 2.30e-13 | 64.7 |
| Msa0293040 | MtrunA17_Chr2g0304061 | 42.353 | 85 | 47 | 2 | 30 | 113 | 158 | 241 | 9.57e-13 | 62.8 |
| Msa0293040 | MtrunA17_Chr5g0439251 | 37.500 | 80 | 48 | 1 | 29 | 106 | 381 | 460 | 9.91e-13 | 63.2 |
| Msa0293040 | MtrunA17_Chr4g0062771 | 37.931 | 87 | 52 | 2 | 27 | 112 | 371 | 456 | 9.94e-13 | 63.2 |
| Msa0293040 | MtrunA17_Chr8g0378621 | 36.538 | 104 | 62 | 2 | 13 | 112 | 345 | 448 | 1.25e-12 | 62.8 |
| Msa0293040 | MtrunA17_Chr4g0043151 | 34.545 | 110 | 61 | 5 | 6 | 112 | 4 | 105 | 1.02e-11 | 58.9 |
| Msa0293040 | MtrunA17_Chr2g0290821 | 34.940 | 83 | 53 | 1 | 30 | 112 | 369 | 450 | 5.99e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293040 | AT1G78520.1 | 63.158 | 114 | 40 | 2 | 1 | 112 | 1 | 114 | 1.39e-47 | 148 |
| Msa0293040 | AT2G43670.1 | 50.427 | 117 | 53 | 2 | 1 | 112 | 1 | 117 | 2.42e-37 | 122 |
| Msa0293040 | AT2G43660.2 | 45.378 | 119 | 58 | 3 | 1 | 112 | 1 | 119 | 8.87e-29 | 101 |
| Msa0293040 | AT2G43660.1 | 44.915 | 118 | 59 | 2 | 1 | 112 | 1 | 118 | 3.41e-28 | 99.8 |
| Msa0293040 | AT3G28250.1 | 53.247 | 77 | 36 | 0 | 30 | 106 | 3 | 79 | 7.17e-27 | 96.3 |
| Msa0293040 | AT4G09462.1 | 43.590 | 117 | 58 | 3 | 1 | 113 | 1 | 113 | 3.65e-26 | 94.4 |
| Msa0293040 | AT4G09464.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
| Msa0293040 | AT4G09467.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
| Msa0293040 | AT4G09465.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 1.51e-25 | 92.8 |
| Msa0293040 | AT5G53600.1 | 41.935 | 93 | 54 | 0 | 20 | 112 | 19 | 111 | 1.07e-23 | 88.2 |
| Msa0293040 | AT4G09466.1 | 41.739 | 115 | 65 | 2 | 1 | 113 | 1 | 115 | 1.24e-23 | 88.2 |
| Msa0293040 | AT4G09090.1 | 42.105 | 114 | 64 | 2 | 1 | 112 | 1 | 114 | 6.56e-23 | 86.3 |
| Msa0293040 | AT1G66852.1 | 42.045 | 88 | 48 | 2 | 28 | 113 | 24 | 110 | 4.11e-21 | 81.3 |
| Msa0293040 | AT1G66870.1 | 41.379 | 87 | 49 | 1 | 28 | 112 | 24 | 110 | 6.45e-21 | 80.9 |
| Msa0293040 | AT1G66870.2 | 41.379 | 87 | 49 | 1 | 28 | 112 | 51 | 137 | 1.02e-20 | 81.3 |
| Msa0293040 | AT1G09460.1 | 48.387 | 93 | 46 | 2 | 20 | 112 | 128 | 218 | 2.36e-20 | 84.0 |
| Msa0293040 | AT4G16165.1 | 40.909 | 88 | 50 | 1 | 28 | 113 | 24 | 111 | 1.04e-19 | 77.8 |
| Msa0293040 | AT4G05430.1 | 38.542 | 96 | 56 | 2 | 19 | 112 | 13 | 107 | 1.34e-19 | 78.6 |
| Msa0293040 | AT4G05430.3 | 38.542 | 96 | 56 | 2 | 19 | 112 | 38 | 132 | 1.97e-19 | 78.6 |
| Msa0293040 | AT5G53610.1 | 38.614 | 101 | 62 | 0 | 10 | 110 | 8 | 108 | 9.82e-19 | 75.5 |
| Msa0293040 | AT5G63225.1 | 42.391 | 92 | 52 | 1 | 22 | 112 | 17 | 108 | 1.04e-18 | 75.5 |
| Msa0293040 | AT1G66855.1 | 34.783 | 115 | 68 | 2 | 1 | 113 | 2 | 111 | 4.22e-18 | 73.9 |
| Msa0293040 | AT2G05790.1 | 42.708 | 96 | 52 | 2 | 17 | 110 | 372 | 466 | 1.45e-17 | 77.0 |
| Msa0293040 | AT5G63240.1 | 36.667 | 90 | 53 | 1 | 27 | 112 | 37 | 126 | 2.50e-17 | 72.4 |
| Msa0293040 | AT4G29360.1 | 39.080 | 87 | 51 | 1 | 28 | 112 | 389 | 475 | 3.36e-17 | 76.3 |
| Msa0293040 | AT4G29360.2 | 39.080 | 87 | 51 | 1 | 28 | 112 | 399 | 485 | 3.53e-17 | 76.3 |
| Msa0293040 | AT1G11820.2 | 36.792 | 106 | 63 | 2 | 11 | 112 | 360 | 465 | 6.63e-17 | 75.1 |
| Msa0293040 | AT5G24318.1 | 37.079 | 89 | 55 | 1 | 25 | 112 | 367 | 455 | 7.84e-17 | 75.1 |
| Msa0293040 | AT4G34480.3 | 36.905 | 84 | 52 | 1 | 30 | 112 | 253 | 336 | 1.38e-16 | 74.3 |
| Msa0293040 | AT4G34480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 364 | 447 | 1.68e-16 | 73.9 |
| Msa0293040 | AT5G24318.3 | 38.372 | 86 | 52 | 1 | 28 | 112 | 231 | 316 | 2.87e-16 | 72.8 |
| Msa0293040 | AT2G01630.1 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 2.98e-16 | 73.6 |
| Msa0293040 | AT4G05430.2 | 36.667 | 90 | 54 | 2 | 19 | 106 | 38 | 126 | 5.39e-16 | 68.9 |
| Msa0293040 | AT2G39640.1 | 37.000 | 100 | 59 | 2 | 15 | 110 | 341 | 440 | 6.53e-16 | 72.4 |
| Msa0293040 | AT2G39640.1 | 37.349 | 83 | 51 | 1 | 30 | 111 | 460 | 542 | 9.92e-16 | 72.0 |
| Msa0293040 | AT5G63230.1 | 39.535 | 86 | 51 | 1 | 28 | 112 | 24 | 109 | 7.65e-16 | 68.2 |
| Msa0293040 | AT5G55180.1 | 40.000 | 85 | 49 | 1 | 28 | 110 | 370 | 454 | 9.74e-16 | 72.0 |
| Msa0293040 | AT3G13560.4 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0293040 | AT3G13560.1 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0293040 | AT3G13560.2 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0293040 | AT3G13560.5 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0293040 | AT3G13560.3 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0293040 | AT3G58100.1 | 30.841 | 107 | 69 | 2 | 8 | 112 | 22 | 125 | 2.75e-15 | 68.2 |
| Msa0293040 | AT1G18650.2 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 5.16e-15 | 66.2 |
| Msa0293040 | AT1G66250.1 | 34.831 | 89 | 56 | 1 | 27 | 113 | 365 | 453 | 6.84e-15 | 69.7 |
| Msa0293040 | AT2G29735.1 | 36.036 | 111 | 68 | 2 | 5 | 112 | 6 | 116 | 9.73e-15 | 65.5 |
| Msa0293040 | AT3G58100.2 | 30.841 | 107 | 69 | 2 | 8 | 112 | 98 | 201 | 9.79e-15 | 68.2 |
| Msa0293040 | AT1G18650.1 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 1.29e-14 | 66.6 |
| Msa0293040 | AT3G55430.1 | 38.095 | 84 | 51 | 1 | 30 | 112 | 366 | 449 | 1.71e-14 | 68.6 |
| Msa0293040 | AT2G01630.3 | 35.106 | 94 | 57 | 2 | 17 | 106 | 345 | 438 | 2.99e-14 | 67.8 |
| Msa0293040 | AT2G30933.1 | 34.314 | 102 | 64 | 2 | 13 | 112 | 65 | 165 | 5.70e-14 | 65.5 |
| Msa0293040 | AT1G11820.3 | 36.000 | 100 | 60 | 2 | 11 | 106 | 360 | 459 | 1.58e-13 | 65.5 |
| Msa0293040 | AT1G29380.3 | 37.931 | 87 | 49 | 3 | 30 | 113 | 148 | 232 | 1.99e-13 | 64.7 |
| Msa0293040 | AT2G16230.1 | 34.524 | 84 | 54 | 1 | 30 | 112 | 366 | 449 | 2.11e-13 | 65.5 |
| Msa0293040 | AT4G26830.2 | 39.286 | 84 | 49 | 1 | 29 | 110 | 370 | 453 | 2.20e-13 | 65.1 |
| Msa0293040 | AT4G26830.1 | 39.286 | 84 | 49 | 1 | 29 | 110 | 366 | 449 | 2.24e-13 | 65.1 |
| Msa0293040 | AT5G55180.2 | 39.506 | 81 | 47 | 1 | 28 | 106 | 370 | 450 | 2.39e-13 | 65.1 |
| Msa0293040 | AT1G79480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 311 | 394 | 2.46e-13 | 65.1 |
| Msa0293040 | AT1G79480.2 | 36.905 | 84 | 52 | 1 | 30 | 112 | 310 | 393 | 2.63e-13 | 65.1 |
| Msa0293040 | AT1G29380.1 | 38.372 | 86 | 48 | 3 | 30 | 112 | 148 | 231 | 2.82e-13 | 64.7 |
| Msa0293040 | AT5G67460.1 | 35.556 | 90 | 56 | 1 | 25 | 112 | 288 | 377 | 3.19e-13 | 64.7 |
| Msa0293040 | AT5G63250.1 | 36.782 | 87 | 51 | 1 | 30 | 112 | 42 | 128 | 3.95e-13 | 61.6 |
| Msa0293040 | AT5G35740.1 | 34.091 | 88 | 55 | 2 | 28 | 112 | 28 | 115 | 6.30e-13 | 60.8 |
| Msa0293040 | AT5G64790.1 | 34.483 | 87 | 55 | 2 | 27 | 112 | 366 | 451 | 6.61e-13 | 63.9 |
| Msa0293040 | AT4G13600.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 61 | 144 | 1.19e-12 | 62.0 |
| Msa0293040 | AT5G56590.1 | 35.294 | 85 | 53 | 1 | 30 | 112 | 369 | 453 | 1.28e-12 | 63.2 |
| Msa0293040 | AT5G24318.2 | 33.735 | 83 | 54 | 1 | 25 | 106 | 367 | 449 | 1.38e-12 | 62.8 |
| Msa0293040 | AT2G30933.2 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
| Msa0293040 | AT2G30933.3 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
| Msa0293040 | AT4G17180.1 | 38.554 | 83 | 50 | 1 | 30 | 112 | 359 | 440 | 3.98e-12 | 61.6 |
| Msa0293040 | AT3G24330.1 | 39.286 | 84 | 49 | 2 | 28 | 110 | 380 | 462 | 7.68e-12 | 60.8 |
| Msa0293040 | AT1G29380.4 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
| Msa0293040 | AT1G29380.2 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
| Msa0293040 | AT2G42930.1 | 35.106 | 94 | 59 | 2 | 14 | 106 | 24 | 116 | 1.25e-11 | 57.8 |
| Msa0293040 | AT5G67460.2 | 35.714 | 84 | 52 | 1 | 25 | 106 | 288 | 371 | 4.60e-11 | 58.5 |
| Msa0293040 | AT5G61130.1 | 31.765 | 85 | 57 | 1 | 29 | 112 | 20 | 104 | 9.46e-11 | 56.6 |
Find 38 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTATGCTATTTAATTTAAT+TGG | 0.086739 | 2_3:+42951030 | Msa0293040:three_prime_UTR |
| ATCAGTATCTTAACATTAAT+TGG | 0.154882 | 2_3:-42951189 | None:intergenic |
| CTCAAAATGGTTCAAAGTTA+AGG | 0.254271 | 2_3:-42951113 | None:intergenic |
| GGGAATATGATCATGGTTAA+TGG | 0.289090 | 2_3:+42950276 | Msa0293040:CDS |
| TAATTGGTGCAAAATTTAGA+TGG | 0.330321 | 2_3:-42951173 | None:intergenic |
| GGTTGTCATTTCAAACCATA+TGG | 0.351784 | 2_3:+42951052 | Msa0293040:three_prime_UTR |
| GTATGCTATTTAATTTAATT+GGG | 0.370890 | 2_3:+42951031 | Msa0293040:three_prime_UTR |
| ATTTCAAACCATATGGATAT+AGG | 0.376847 | 2_3:+42951059 | Msa0293040:three_prime_UTR |
| AGATCGATAATAGAGATTCA+TGG | 0.408516 | 2_3:-42950548 | None:intergenic |
| GGAATATGATCATGGTTAAT+GGG | 0.423180 | 2_3:+42950277 | Msa0293040:CDS |
| ACTGCATTTATGCATAGAAA+TGG | 0.427694 | 2_3:+42950968 | Msa0293040:exon |
| TCAAAATGGTTCAAAGTTAA+GGG | 0.430023 | 2_3:-42951112 | None:intergenic |
| TAGTGGTAGATTAGAGTGTG+TGG | 0.462093 | 2_3:-42949434 | None:intergenic |
| AATCTCTATTATCGATCTAA+AGG | 0.467046 | 2_3:+42950553 | Msa0293040:CDS |
| TATGATCATGGTTAATGGGC+AGG | 0.497346 | 2_3:+42950281 | Msa0293040:CDS |
| GATCTAAAGGAACGGACCAT+TGG | 0.511484 | 2_3:+42950566 | Msa0293040:CDS |
| AGCATATGCCTATATCCATA+TGG | 0.512895 | 2_3:-42951067 | None:intergenic |
| AGTGGTAGATTAGAGTGTGT+GGG | 0.523235 | 2_3:-42949433 | None:intergenic |
| TGATATATAGAAAGAGATAG+TGG | 0.528900 | 2_3:-42949451 | None:intergenic |
| ATTTGAGAGACAAGAAAAGA+AGG | 0.533155 | 2_3:-42949597 | None:intergenic |
| AGAGGTAGTTTAGCCATGGT+TGG | 0.534249 | 2_3:-42949565 | None:intergenic |
| AGTGTTGCTTGATCTGATGA+AGG | 0.538388 | 2_3:-42950421 | None:intergenic |
| CTCTGAAATCGCAGTTCCAA+TGG | 0.540263 | 2_3:-42950582 | None:intergenic |
| GAGAAGAGGTAGTTTAGCCA+TGG | 0.544546 | 2_3:-42949569 | None:intergenic |
| GATTGCAGAATTCTTCAGAA+AGG | 0.545548 | 2_3:+42950478 | Msa0293040:CDS |
| AGAGCAAGCATAATTGAGGT+TGG | 0.555744 | 2_3:-42950449 | None:intergenic |
| CATTGGAACTGCGATTTCAG+AGG | 0.562954 | 2_3:+42950583 | Msa0293040:CDS |
| TACAGGAGGGAATATGATCA+TGG | 0.563584 | 2_3:+42950269 | Msa0293040:intron |
| TTAGTACAAGGCTGCAGACA+AGG | 0.569573 | 2_3:+42949525 | Msa0293040:five_prime_UTR |
| ATAATAGAGATTCATGGCGA+TGG | 0.571419 | 2_3:-42950542 | None:intergenic |
| AGAGTGTGTGGGAGTGAGTG+TGG | 0.572831 | 2_3:-42949422 | None:intergenic |
| CGTGAGAGCAAGCATAATTG+AGG | 0.578215 | 2_3:-42950453 | None:intergenic |
| GCAGTACTGCTATTAGTACA+AGG | 0.603907 | 2_3:+42949513 | Msa0293040:five_prime_UTR |
| GATTCATGGCGATGGAAGCG+CGG | 0.609487 | 2_3:-42950534 | None:intergenic |
| CTATTATCGATCTAAAGGAA+CGG | 0.620629 | 2_3:+42950558 | Msa0293040:CDS |
| AGTACTGCTATACTATTCAG+TGG | 0.645630 | 2_3:-42949498 | None:intergenic |
| AACACAGAAAACTTGGTGCG+TGG | 0.648923 | 2_3:+42950393 | Msa0293040:intron |
| ATAACATCATCAACCAACCA+TGG | 0.661278 | 2_3:+42949552 | Msa0293040:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTAATTT+TGG | - | chr2_3:42949828-42949847 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAATTTAAT+TGG | - | chr2_3:42950160-42950179 | None:intergenic | 0.0% |
| !!! | AATTAAATTTTTTTTTTTTT+TGG | + | chr2_3:42950159-42950178 | Msa0293040:intron | 0.0% |
| !!! | ATTAAATTTTTTTTTTTTTT+GGG | + | chr2_3:42950160-42950179 | Msa0293040:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTAATTT+TGG | - | chr2_3:42949828-42949847 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAATTTAAT+TGG | - | chr2_3:42950160-42950179 | None:intergenic | 0.0% |
| !!! | AATTAAATTTTTTTTTTTTT+TGG | + | chr2_3:42950159-42950178 | Msa0293040:intron | 0.0% |
| !!! | ATTAAATTTTTTTTTTTTTT+GGG | + | chr2_3:42950160-42950179 | Msa0293040:intron | 0.0% |
| !! | TATTGAGATAAATTATTATA+AGG | - | chr2_3:42950007-42950026 | None:intergenic | 10.0% |
| !!! | GGTAATTTATATTTTTTTTT+AGG | - | chr2_3:42950132-42950151 | None:intergenic | 10.0% |
| !! | AAAAAAATTTAATTGGTTAA+TGG | - | chr2_3:42950153-42950172 | None:intergenic | 10.0% |
| !! | AAAAACTTTATGTAATTTAT+TGG | - | chr2_3:42950338-42950357 | None:intergenic | 10.0% |
| !! | TATTGAGATAAATTATTATA+AGG | - | chr2_3:42950007-42950026 | None:intergenic | 10.0% |
| !!! | GGTAATTTATATTTTTTTTT+AGG | - | chr2_3:42950132-42950151 | None:intergenic | 10.0% |
| !! | AAAAAAATTTAATTGGTTAA+TGG | - | chr2_3:42950153-42950172 | None:intergenic | 10.0% |
| !! | AAAAACTTTATGTAATTTAT+TGG | - | chr2_3:42950338-42950357 | None:intergenic | 10.0% |
| !!! | GTTAAATTTGAACATAATTT+TGG | - | chr2_3:42949880-42949899 | None:intergenic | 15.0% |
| !! | AAATTATGTTCAAATTTAAC+CGG | + | chr2_3:42949880-42949899 | Msa0293040:intron | 15.0% |
| !!! | AAATTACTAACATTTTCTTT+TGG | - | chr2_3:42949981-42950000 | None:intergenic | 15.0% |
| !! | TAATTAATATCACTAAACAT+TGG | - | chr2_3:42950057-42950076 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTAGGGAAAT+TGG | - | chr2_3:42950124-42950143 | None:intergenic | 15.0% |
| !!! | AGTATGCTATTTAATTTAAT+TGG | + | chr2_3:42951030-42951049 | Msa0293040:three_prime_UTR | 15.0% |
| !!! | GTATGCTATTTAATTTAATT+GGG | + | chr2_3:42951031-42951050 | Msa0293040:three_prime_UTR | 15.0% |
| !!! | GTTAAATTTGAACATAATTT+TGG | - | chr2_3:42949880-42949899 | None:intergenic | 15.0% |
| !! | AAATTATGTTCAAATTTAAC+CGG | + | chr2_3:42949880-42949899 | Msa0293040:intron | 15.0% |
| !!! | AAATTACTAACATTTTCTTT+TGG | - | chr2_3:42949981-42950000 | None:intergenic | 15.0% |
| !! | TAATTAATATCACTAAACAT+TGG | - | chr2_3:42950057-42950076 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTAGGGAAAT+TGG | - | chr2_3:42950124-42950143 | None:intergenic | 15.0% |
| !!! | AGTATGCTATTTAATTTAAT+TGG | + | chr2_3:42951030-42951049 | Msa0293040:three_prime_UTR | 15.0% |
| !!! | GTATGCTATTTAATTTAATT+GGG | + | chr2_3:42951031-42951050 | Msa0293040:three_prime_UTR | 15.0% |
| !! | GCATAATAATACTCATTATA+AGG | - | chr2_3:42949791-42949810 | None:intergenic | 20.0% |
| !!! | ATGTAATTTGCAAAGTAATA+TGG | + | chr2_3:42949952-42949971 | Msa0293040:intron | 20.0% |
| !!! | AGTATTTTTTTGACTCAAAA+TGG | - | chr2_3:42951129-42951148 | None:intergenic | 20.0% |
| !! | ATCAGTATCTTAACATTAAT+TGG | - | chr2_3:42951192-42951211 | None:intergenic | 20.0% |
| !! | GCATAATAATACTCATTATA+AGG | - | chr2_3:42949791-42949810 | None:intergenic | 20.0% |
| !!! | ATGTAATTTGCAAAGTAATA+TGG | + | chr2_3:42949952-42949971 | Msa0293040:intron | 20.0% |
| !!! | AGTATTTTTTTGACTCAAAA+TGG | - | chr2_3:42951129-42951148 | None:intergenic | 20.0% |
| !! | ATCAGTATCTTAACATTAAT+TGG | - | chr2_3:42951192-42951211 | None:intergenic | 20.0% |
| ! | TTTAAAAAGGAAACAATGGT+TGG | - | chr2_3:42949388-42949407 | None:intergenic | 25.0% |
| ! | TGATATATAGAAAGAGATAG+TGG | - | chr2_3:42949454-42949473 | None:intergenic | 25.0% |
| ! | GAGACAAACAAATTTAAAGA+AGG | - | chr2_3:42949649-42949668 | None:intergenic | 25.0% |
| ! | TTTATTACTAGAATCTGCTT+TGG | + | chr2_3:42949752-42949771 | Msa0293040:intron | 25.0% |
| !!! | TTTTTAGGGAAATTGGTTAA+TGG | - | chr2_3:42950117-42950136 | None:intergenic | 25.0% |
| ! | TATGAAAAACACAGAAAACT+TGG | + | chr2_3:42950386-42950405 | Msa0293040:intron | 25.0% |
| ! | AATCTCTATTATCGATCTAA+AGG | + | chr2_3:42950553-42950572 | Msa0293040:CDS | 25.0% |
| !!! | CCAATCATAGTTCTAATTTT+CGG | + | chr2_3:42950726-42950745 | Msa0293040:intron | 25.0% |
| ! | ATTTCAAACCATATGGATAT+AGG | + | chr2_3:42951059-42951078 | Msa0293040:three_prime_UTR | 25.0% |
| ! | TCAAAATGGTTCAAAGTTAA+GGG | - | chr2_3:42951115-42951134 | None:intergenic | 25.0% |
| ! | TAATTGGTGCAAAATTTAGA+TGG | - | chr2_3:42951176-42951195 | None:intergenic | 25.0% |
| ! | TTTAAAAAGGAAACAATGGT+TGG | - | chr2_3:42949388-42949407 | None:intergenic | 25.0% |
| ! | TGATATATAGAAAGAGATAG+TGG | - | chr2_3:42949454-42949473 | None:intergenic | 25.0% |
| ! | GAGACAAACAAATTTAAAGA+AGG | - | chr2_3:42949649-42949668 | None:intergenic | 25.0% |
| ! | TTTATTACTAGAATCTGCTT+TGG | + | chr2_3:42949752-42949771 | Msa0293040:intron | 25.0% |
| !!! | TTTTTAGGGAAATTGGTTAA+TGG | - | chr2_3:42950117-42950136 | None:intergenic | 25.0% |
| ! | TATGAAAAACACAGAAAACT+TGG | + | chr2_3:42950386-42950405 | Msa0293040:intron | 25.0% |
| ! | AATCTCTATTATCGATCTAA+AGG | + | chr2_3:42950553-42950572 | Msa0293040:CDS | 25.0% |
| !!! | CCAATCATAGTTCTAATTTT+CGG | + | chr2_3:42950726-42950745 | Msa0293040:intron | 25.0% |
| ! | ATTTCAAACCATATGGATAT+AGG | + | chr2_3:42951059-42951078 | Msa0293040:three_prime_UTR | 25.0% |
| ! | TCAAAATGGTTCAAAGTTAA+GGG | - | chr2_3:42951115-42951134 | None:intergenic | 25.0% |
| ! | TAATTGGTGCAAAATTTAGA+TGG | - | chr2_3:42951176-42951195 | None:intergenic | 25.0% |
| AATAAAGAGGGGGTTTAAAA+AGG | - | chr2_3:42949401-42949420 | None:intergenic | 30.0% | |
| AAAAGAAGGAAAAAGAGAAG+AGG | - | chr2_3:42949586-42949605 | None:intergenic | 30.0% | |
| ATTTGAGAGACAAGAAAAGA+AGG | - | chr2_3:42949600-42949619 | None:intergenic | 30.0% | |
| GTAATGTACTACATCTACAT+TGG | + | chr2_3:42949700-42949719 | Msa0293040:intron | 30.0% | |
| !!! | CTGGTCTCATTTTGTTTTTT+TGG | + | chr2_3:42949724-42949743 | Msa0293040:intron | 30.0% |
| GGAATATGATCATGGTTAAT+GGG | + | chr2_3:42950277-42950296 | Msa0293040:CDS | 30.0% | |
| AGATCGATAATAGAGATTCA+TGG | - | chr2_3:42950551-42950570 | None:intergenic | 30.0% | |
| CTATTATCGATCTAAAGGAA+CGG | + | chr2_3:42950558-42950577 | Msa0293040:CDS | 30.0% | |
| AATGAGTTATGTGACTTACT+TGG | - | chr2_3:42950634-42950653 | None:intergenic | 30.0% | |
| CCGAAAATTAGAACTATGAT+TGG | - | chr2_3:42950729-42950748 | None:intergenic | 30.0% | |
| CAACATTGTAACTGCAATTA+TGG | + | chr2_3:42950777-42950796 | Msa0293040:intron | 30.0% | |
| CCATGTGAACATCAATATTA+TGG | - | chr2_3:42950832-42950851 | None:intergenic | 30.0% | |
| CCATAATATTGATGTTCACA+TGG | + | chr2_3:42950829-42950848 | Msa0293040:intron | 30.0% | |
| !!! | TGGTTGATGGTTTTAAATTG+CGG | - | chr2_3:42950877-42950896 | None:intergenic | 30.0% |
| GTCATATCAAACTCGTAAAT+TGG | - | chr2_3:42950897-42950916 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATTCTGAATTGC+AGG | + | chr2_3:42950937-42950956 | Msa0293040:intron | 30.0% |
| ACTGCATTTATGCATAGAAA+TGG | + | chr2_3:42950968-42950987 | Msa0293040:exon | 30.0% | |
| CTCAAAATGGTTCAAAGTTA+AGG | - | chr2_3:42951116-42951135 | None:intergenic | 30.0% | |
| ACAACTAAAAATGAACGGAT+GGG | - | chr2_3:42951237-42951256 | None:intergenic | 30.0% | |
| AGACGACAACTAAAAATGAA+CGG | - | chr2_3:42951242-42951261 | None:intergenic | 30.0% | |
| !!! | CATTTTTAGTTGTCGTCTTT+TGG | + | chr2_3:42951244-42951263 | Msa0293040:three_prime_UTR | 30.0% |
| AATAAAGAGGGGGTTTAAAA+AGG | - | chr2_3:42949401-42949420 | None:intergenic | 30.0% | |
| AAAAGAAGGAAAAAGAGAAG+AGG | - | chr2_3:42949586-42949605 | None:intergenic | 30.0% | |
| ATTTGAGAGACAAGAAAAGA+AGG | - | chr2_3:42949600-42949619 | None:intergenic | 30.0% | |
| GTAATGTACTACATCTACAT+TGG | + | chr2_3:42949700-42949719 | Msa0293040:intron | 30.0% | |
| !!! | CTGGTCTCATTTTGTTTTTT+TGG | + | chr2_3:42949724-42949743 | Msa0293040:intron | 30.0% |
| GGAATATGATCATGGTTAAT+GGG | + | chr2_3:42950277-42950296 | Msa0293040:CDS | 30.0% | |
| AGATCGATAATAGAGATTCA+TGG | - | chr2_3:42950551-42950570 | None:intergenic | 30.0% | |
| CTATTATCGATCTAAAGGAA+CGG | + | chr2_3:42950558-42950577 | Msa0293040:CDS | 30.0% | |
| AATGAGTTATGTGACTTACT+TGG | - | chr2_3:42950634-42950653 | None:intergenic | 30.0% | |
| CCGAAAATTAGAACTATGAT+TGG | - | chr2_3:42950729-42950748 | None:intergenic | 30.0% | |
| CAACATTGTAACTGCAATTA+TGG | + | chr2_3:42950777-42950796 | Msa0293040:intron | 30.0% | |
| CCATGTGAACATCAATATTA+TGG | - | chr2_3:42950832-42950851 | None:intergenic | 30.0% | |
| CCATAATATTGATGTTCACA+TGG | + | chr2_3:42950829-42950848 | Msa0293040:intron | 30.0% | |
| !!! | TGGTTGATGGTTTTAAATTG+CGG | - | chr2_3:42950877-42950896 | None:intergenic | 30.0% |
| GTCATATCAAACTCGTAAAT+TGG | - | chr2_3:42950897-42950916 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATTCTGAATTGC+AGG | + | chr2_3:42950937-42950956 | Msa0293040:intron | 30.0% |
| ACTGCATTTATGCATAGAAA+TGG | + | chr2_3:42950968-42950987 | Msa0293040:exon | 30.0% | |
| CTCAAAATGGTTCAAAGTTA+AGG | - | chr2_3:42951116-42951135 | None:intergenic | 30.0% | |
| ACAACTAAAAATGAACGGAT+GGG | - | chr2_3:42951237-42951256 | None:intergenic | 30.0% | |
| AGACGACAACTAAAAATGAA+CGG | - | chr2_3:42951242-42951261 | None:intergenic | 30.0% | |
| !!! | CATTTTTAGTTGTCGTCTTT+TGG | + | chr2_3:42951244-42951263 | Msa0293040:three_prime_UTR | 30.0% |
| GGGGTTTAAAAAGGAAACAA+TGG | - | chr2_3:42949392-42949411 | None:intergenic | 35.0% | |
| AGTGAGTGTGGAAATAAAGA+GGG | - | chr2_3:42949413-42949432 | None:intergenic | 35.0% | |
| AGTACTGCTATACTATTCAG+TGG | - | chr2_3:42949501-42949520 | None:intergenic | 35.0% | |
| ATAACATCATCAACCAACCA+TGG | + | chr2_3:42949552-42949571 | Msa0293040:exon | 35.0% | |
| ! | CTTTTCTTGTCTCTCAAATC+AGG | + | chr2_3:42949601-42949620 | Msa0293040:CDS | 35.0% |
| TTGTTTAAGTGATCTGAGTC+CGG | - | chr2_3:42949902-42949921 | None:intergenic | 35.0% | |
| GGGAATATGATCATGGTTAA+TGG | + | chr2_3:42950276-42950295 | Msa0293040:CDS | 35.0% | |
| GATTGCAGAATTCTTCAGAA+AGG | + | chr2_3:42950478-42950497 | Msa0293040:CDS | 35.0% | |
| ATAATAGAGATTCATGGCGA+TGG | - | chr2_3:42950545-42950564 | None:intergenic | 35.0% | |
| !! | TATGATTGGTTTCGATGTCA+AGG | - | chr2_3:42950715-42950734 | None:intergenic | 35.0% |
| CAAACTCGTAAATTGGTTGA+TGG | - | chr2_3:42950890-42950909 | None:intergenic | 35.0% | |
| TCATTCTGAATTGCAGGTTA+TGG | + | chr2_3:42950943-42950962 | Msa0293040:intron | 35.0% | |
| ! | GGTTGTCATTTCAAACCATA+TGG | + | chr2_3:42951052-42951071 | Msa0293040:three_prime_UTR | 35.0% |
| AGCATATGCCTATATCCATA+TGG | - | chr2_3:42951070-42951089 | None:intergenic | 35.0% | |
| GACAACTAAAAATGAACGGA+TGG | - | chr2_3:42951238-42951257 | None:intergenic | 35.0% | |
| GGGGTTTAAAAAGGAAACAA+TGG | - | chr2_3:42949392-42949411 | None:intergenic | 35.0% | |
| AGTGAGTGTGGAAATAAAGA+GGG | - | chr2_3:42949413-42949432 | None:intergenic | 35.0% | |
| AGTACTGCTATACTATTCAG+TGG | - | chr2_3:42949501-42949520 | None:intergenic | 35.0% | |
| ATAACATCATCAACCAACCA+TGG | + | chr2_3:42949552-42949571 | Msa0293040:exon | 35.0% | |
| ! | CTTTTCTTGTCTCTCAAATC+AGG | + | chr2_3:42949601-42949620 | Msa0293040:CDS | 35.0% |
| TTGTTTAAGTGATCTGAGTC+CGG | - | chr2_3:42949902-42949921 | None:intergenic | 35.0% | |
| GGGAATATGATCATGGTTAA+TGG | + | chr2_3:42950276-42950295 | Msa0293040:CDS | 35.0% | |
| GATTGCAGAATTCTTCAGAA+AGG | + | chr2_3:42950478-42950497 | Msa0293040:CDS | 35.0% | |
| ATAATAGAGATTCATGGCGA+TGG | - | chr2_3:42950545-42950564 | None:intergenic | 35.0% | |
| !! | TATGATTGGTTTCGATGTCA+AGG | - | chr2_3:42950715-42950734 | None:intergenic | 35.0% |
| CAAACTCGTAAATTGGTTGA+TGG | - | chr2_3:42950890-42950909 | None:intergenic | 35.0% | |
| TCATTCTGAATTGCAGGTTA+TGG | + | chr2_3:42950943-42950962 | Msa0293040:intron | 35.0% | |
| ! | GGTTGTCATTTCAAACCATA+TGG | + | chr2_3:42951052-42951071 | Msa0293040:three_prime_UTR | 35.0% |
| AGCATATGCCTATATCCATA+TGG | - | chr2_3:42951070-42951089 | None:intergenic | 35.0% | |
| GACAACTAAAAATGAACGGA+TGG | - | chr2_3:42951238-42951257 | None:intergenic | 35.0% | |
| TGAGTGTGGAAATAAAGAGG+GGG | - | chr2_3:42949411-42949430 | None:intergenic | 40.0% | |
| GTGAGTGTGGAAATAAAGAG+GGG | - | chr2_3:42949412-42949431 | None:intergenic | 40.0% | |
| GAGTGAGTGTGGAAATAAAG+AGG | - | chr2_3:42949414-42949433 | None:intergenic | 40.0% | |
| AGTGGTAGATTAGAGTGTGT+GGG | - | chr2_3:42949436-42949455 | None:intergenic | 40.0% | |
| TAGTGGTAGATTAGAGTGTG+TGG | - | chr2_3:42949437-42949456 | None:intergenic | 40.0% | |
| GCAGTACTGCTATTAGTACA+AGG | + | chr2_3:42949513-42949532 | Msa0293040:five_prime_UTR | 40.0% | |
| GTACTACATCTACATTGGTC+TGG | + | chr2_3:42949705-42949724 | Msa0293040:intron | 40.0% | |
| ! | TTCCCTCTTTTGACATGTAC+AGG | + | chr2_3:42950252-42950271 | Msa0293040:intron | 40.0% |
| CTCCTGTACATGTCAAAAGA+GGG | - | chr2_3:42950257-42950276 | None:intergenic | 40.0% | |
| ! | CTCTTTTGACATGTACAGGA+GGG | + | chr2_3:42950256-42950275 | Msa0293040:intron | 40.0% |
| TACAGGAGGGAATATGATCA+TGG | + | chr2_3:42950269-42950288 | Msa0293040:intron | 40.0% | |
| ! | TATGATCATGGTTAATGGGC+AGG | + | chr2_3:42950281-42950300 | Msa0293040:CDS | 40.0% |
| !! | AGTGTTGCTTGATCTGATGA+AGG | - | chr2_3:42950424-42950443 | None:intergenic | 40.0% |
| AGAGCAAGCATAATTGAGGT+TGG | - | chr2_3:42950452-42950471 | None:intergenic | 40.0% | |
| !! | AGATTTTCAGGACTAGAGCA+GGG | - | chr2_3:42950508-42950527 | None:intergenic | 40.0% |
| TGTTGCATAGACCGCAATTA+TGG | - | chr2_3:42950759-42950778 | None:intergenic | 40.0% | |
| ACAAGCAAATGAAGTCGATG+CGG | - | chr2_3:42950803-42950822 | None:intergenic | 40.0% | |
| GTTCACATGGTAACTACAAC+CGG | + | chr2_3:42950842-42950861 | Msa0293040:intron | 40.0% | |
| TGAGTGTGGAAATAAAGAGG+GGG | - | chr2_3:42949411-42949430 | None:intergenic | 40.0% | |
| GTGAGTGTGGAAATAAAGAG+GGG | - | chr2_3:42949412-42949431 | None:intergenic | 40.0% | |
| GAGTGAGTGTGGAAATAAAG+AGG | - | chr2_3:42949414-42949433 | None:intergenic | 40.0% | |
| AGTGGTAGATTAGAGTGTGT+GGG | - | chr2_3:42949436-42949455 | None:intergenic | 40.0% | |
| TAGTGGTAGATTAGAGTGTG+TGG | - | chr2_3:42949437-42949456 | None:intergenic | 40.0% | |
| GCAGTACTGCTATTAGTACA+AGG | + | chr2_3:42949513-42949532 | Msa0293040:five_prime_UTR | 40.0% | |
| GTACTACATCTACATTGGTC+TGG | + | chr2_3:42949705-42949724 | Msa0293040:intron | 40.0% | |
| ! | TTCCCTCTTTTGACATGTAC+AGG | + | chr2_3:42950252-42950271 | Msa0293040:intron | 40.0% |
| CTCCTGTACATGTCAAAAGA+GGG | - | chr2_3:42950257-42950276 | None:intergenic | 40.0% | |
| ! | CTCTTTTGACATGTACAGGA+GGG | + | chr2_3:42950256-42950275 | Msa0293040:intron | 40.0% |
| TACAGGAGGGAATATGATCA+TGG | + | chr2_3:42950269-42950288 | Msa0293040:intron | 40.0% | |
| ! | TATGATCATGGTTAATGGGC+AGG | + | chr2_3:42950281-42950300 | Msa0293040:CDS | 40.0% |
| !! | AGTGTTGCTTGATCTGATGA+AGG | - | chr2_3:42950424-42950443 | None:intergenic | 40.0% |
| AGAGCAAGCATAATTGAGGT+TGG | - | chr2_3:42950452-42950471 | None:intergenic | 40.0% | |
| !! | AGATTTTCAGGACTAGAGCA+GGG | - | chr2_3:42950508-42950527 | None:intergenic | 40.0% |
| TGTTGCATAGACCGCAATTA+TGG | - | chr2_3:42950759-42950778 | None:intergenic | 40.0% | |
| ACAAGCAAATGAAGTCGATG+CGG | - | chr2_3:42950803-42950822 | None:intergenic | 40.0% | |
| GTTCACATGGTAACTACAAC+CGG | + | chr2_3:42950842-42950861 | Msa0293040:intron | 40.0% | |
| TTAGTACAAGGCTGCAGACA+AGG | + | chr2_3:42949525-42949544 | Msa0293040:five_prime_UTR | 45.0% | |
| AGAGGTAGTTTAGCCATGGT+TGG | - | chr2_3:42949568-42949587 | None:intergenic | 45.0% | |
| GAGAAGAGGTAGTTTAGCCA+TGG | - | chr2_3:42949572-42949591 | None:intergenic | 45.0% | |
| CCTCCTGTACATGTCAAAAG+AGG | - | chr2_3:42950258-42950277 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGACATGTACAGG+AGG | + | chr2_3:42950255-42950274 | Msa0293040:intron | 45.0% |
| !! | AACACAGAAAACTTGGTGCG+TGG | + | chr2_3:42950393-42950412 | Msa0293040:intron | 45.0% |
| CGTGAGAGCAAGCATAATTG+AGG | - | chr2_3:42950456-42950475 | None:intergenic | 45.0% | |
| !! | GATTTTCAGGACTAGAGCAG+GGG | - | chr2_3:42950507-42950526 | None:intergenic | 45.0% |
| !! | GAGATTTTCAGGACTAGAGC+AGG | - | chr2_3:42950509-42950528 | None:intergenic | 45.0% |
| GATCTAAAGGAACGGACCAT+TGG | + | chr2_3:42950566-42950585 | Msa0293040:CDS | 45.0% | |
| !! | CTCTGAAATCGCAGTTCCAA+TGG | - | chr2_3:42950585-42950604 | None:intergenic | 45.0% |
| CATTGGAACTGCGATTTCAG+AGG | + | chr2_3:42950583-42950602 | Msa0293040:CDS | 45.0% | |
| TCGGACTGCAACCATAATTG+CGG | + | chr2_3:42950745-42950764 | Msa0293040:intron | 45.0% | |
| TAAATTGCGGTTGCAACCAC+CGG | - | chr2_3:42950864-42950883 | None:intergenic | 45.0% | |
| TTAGTACAAGGCTGCAGACA+AGG | + | chr2_3:42949525-42949544 | Msa0293040:five_prime_UTR | 45.0% | |
| AGAGGTAGTTTAGCCATGGT+TGG | - | chr2_3:42949568-42949587 | None:intergenic | 45.0% | |
| GAGAAGAGGTAGTTTAGCCA+TGG | - | chr2_3:42949572-42949591 | None:intergenic | 45.0% | |
| CCTCCTGTACATGTCAAAAG+AGG | - | chr2_3:42950258-42950277 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGACATGTACAGG+AGG | + | chr2_3:42950255-42950274 | Msa0293040:intron | 45.0% |
| !! | AACACAGAAAACTTGGTGCG+TGG | + | chr2_3:42950393-42950412 | Msa0293040:intron | 45.0% |
| CGTGAGAGCAAGCATAATTG+AGG | - | chr2_3:42950456-42950475 | None:intergenic | 45.0% | |
| !! | GATTTTCAGGACTAGAGCAG+GGG | - | chr2_3:42950507-42950526 | None:intergenic | 45.0% |
| !! | GAGATTTTCAGGACTAGAGC+AGG | - | chr2_3:42950509-42950528 | None:intergenic | 45.0% |
| GATCTAAAGGAACGGACCAT+TGG | + | chr2_3:42950566-42950585 | Msa0293040:CDS | 45.0% | |
| !! | CTCTGAAATCGCAGTTCCAA+TGG | - | chr2_3:42950585-42950604 | None:intergenic | 45.0% |
| CATTGGAACTGCGATTTCAG+AGG | + | chr2_3:42950583-42950602 | Msa0293040:CDS | 45.0% | |
| TCGGACTGCAACCATAATTG+CGG | + | chr2_3:42950745-42950764 | Msa0293040:intron | 45.0% | |
| TAAATTGCGGTTGCAACCAC+CGG | - | chr2_3:42950864-42950883 | None:intergenic | 45.0% | |
| !!! | GTAATTTATATTTTTTTTTA+GGG | - | chr2_3:42950131-42950150 | None:intergenic | 5.0% |
| !!! | GTAATTTATATTTTTTTTTA+GGG | - | chr2_3:42950131-42950150 | None:intergenic | 5.0% |
| ! | GCGCGGTTCATGAGATTTTC+AGG | - | chr2_3:42950520-42950539 | None:intergenic | 50.0% |
| CACATGGTAACTACAACCGG+TGG | + | chr2_3:42950845-42950864 | Msa0293040:intron | 50.0% | |
| ! | GCGCGGTTCATGAGATTTTC+AGG | - | chr2_3:42950520-42950539 | None:intergenic | 50.0% |
| CACATGGTAACTACAACCGG+TGG | + | chr2_3:42950845-42950864 | Msa0293040:intron | 50.0% | |
| AGAGTGTGTGGGAGTGAGTG+TGG | - | chr2_3:42949425-42949444 | None:intergenic | 55.0% | |
| GATTCATGGCGATGGAAGCG+CGG | - | chr2_3:42950537-42950556 | None:intergenic | 55.0% | |
| AGAGTGTGTGGGAGTGAGTG+TGG | - | chr2_3:42949425-42949444 | None:intergenic | 55.0% | |
| GATTCATGGCGATGGAAGCG+CGG | - | chr2_3:42950537-42950556 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 42949384 | 42951363 | 42949384 | ID=Msa0293040;Name=Msa0293040 |
| chr2_3 | mRNA | 42949384 | 42951363 | 42949384 | ID=Msa0293040-mRNA-1;Parent=Msa0293040;Name=Msa0293040-mRNA-1;_AED=0.34;_eAED=0.34;_QI=160|1|1|1|0.75|0.6|5|379|113 |
| chr2_3 | exon | 42949384 | 42949394 | 42949384 | ID=Msa0293040-mRNA-1:exon:13711;Parent=Msa0293040-mRNA-1 |
| chr2_3 | exon | 42949422 | 42949622 | 42949422 | ID=Msa0293040-mRNA-1:exon:13712;Parent=Msa0293040-mRNA-1 |
| chr2_3 | exon | 42950274 | 42950302 | 42950274 | ID=Msa0293040-mRNA-1:exon:13713;Parent=Msa0293040-mRNA-1 |
| chr2_3 | exon | 42950400 | 42950634 | 42950400 | ID=Msa0293040-mRNA-1:exon:13714;Parent=Msa0293040-mRNA-1 |
| chr2_3 | exon | 42950959 | 42951363 | 42950959 | ID=Msa0293040-mRNA-1:exon:13715;Parent=Msa0293040-mRNA-1 |
| chr2_3 | five_prime_UTR | 42949384 | 42949394 | 42949384 | ID=Msa0293040-mRNA-1:five_prime_utr;Parent=Msa0293040-mRNA-1 |
| chr2_3 | five_prime_UTR | 42949422 | 42949570 | 42949422 | ID=Msa0293040-mRNA-1:five_prime_utr;Parent=Msa0293040-mRNA-1 |
| chr2_3 | CDS | 42949571 | 42949622 | 42949571 | ID=Msa0293040-mRNA-1:cds;Parent=Msa0293040-mRNA-1 |
| chr2_3 | CDS | 42950274 | 42950302 | 42950274 | ID=Msa0293040-mRNA-1:cds;Parent=Msa0293040-mRNA-1 |
| chr2_3 | CDS | 42950400 | 42950634 | 42950400 | ID=Msa0293040-mRNA-1:cds;Parent=Msa0293040-mRNA-1 |
| chr2_3 | CDS | 42950959 | 42950984 | 42950959 | ID=Msa0293040-mRNA-1:cds;Parent=Msa0293040-mRNA-1 |
| chr2_3 | three_prime_UTR | 42950985 | 42951363 | 42950985 | ID=Msa0293040-mRNA-1:three_prime_utr;Parent=Msa0293040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
