Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484570 | XP_013464448.2 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 6.13e-78 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484570 | sp|P52409|E13B_WHEAT | 44.828 | 87 | 48 | 0 | 26 | 112 | 373 | 459 | 3.57e-21 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484570 | I3SE25 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 2.93e-78 | 235 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0484570 | 0.811930 | 5.473045e-51 | -8.615850e-47 |
| Msa0014770 | Msa0484570 | 0.860440 | 2.062772e-63 | -8.615850e-47 |
| Msa0016040 | Msa0484570 | 0.805288 | 1.435068e-49 | -8.615850e-47 |
| Msa0025160 | Msa0484570 | 0.817032 | 4.069635e-52 | -8.615850e-47 |
| Msa0025580 | Msa0484570 | 0.832150 | 1.114086e-55 | -8.615850e-47 |
| Msa0032460 | Msa0484570 | 0.832219 | 1.070868e-55 | -8.615850e-47 |
| Msa0032980 | Msa0484570 | 0.829696 | 4.456344e-55 | -8.615850e-47 |
| Msa0033780 | Msa0484570 | 0.800216 | 1.599302e-48 | -8.615850e-47 |
| Msa0035270 | Msa0484570 | 0.801475 | 8.849591e-49 | -8.615850e-47 |
| Msa0035340 | Msa0484570 | 0.817863 | 2.644834e-52 | -8.615850e-47 |
| Msa0035380 | Msa0484570 | 0.812723 | 3.673428e-51 | -8.615850e-47 |
| Msa0037740 | Msa0484570 | 0.824500 | 7.806325e-54 | -8.615850e-47 |
| Msa0048510 | Msa0484570 | 0.810130 | 1.342874e-50 | -8.615850e-47 |
| Msa0050660 | Msa0484570 | 0.822283 | 2.573068e-53 | -8.615850e-47 |
| Msa0050700 | Msa0484570 | 0.823443 | 1.381724e-53 | -8.615850e-47 |
| Msa0050790 | Msa0484570 | 0.819832 | 9.440887e-53 | -8.615850e-47 |
| Msa0053070 | Msa0484570 | 0.809506 | 1.829810e-50 | -8.615850e-47 |
| Msa0062340 | Msa0484570 | 0.815618 | 8.431035e-52 | -8.615850e-47 |
| Msa0067330 | Msa0484570 | 0.824874 | 6.371201e-54 | -8.615850e-47 |
| Msa0073120 | Msa0484570 | 0.804920 | 1.713238e-49 | -8.615850e-47 |
| Msa0077560 | Msa0484570 | 0.828574 | 8.335448e-55 | -8.615850e-47 |
| Msa0080610 | Msa0484570 | 0.807359 | 5.254654e-50 | -8.615850e-47 |
| Msa0090400 | Msa0484570 | 0.813341 | 2.688084e-51 | -8.615850e-47 |
| Msa0091350 | Msa0484570 | 0.800053 | 1.726071e-48 | -8.615850e-47 |
| Msa0094780 | Msa0484570 | 0.804227 | 2.390770e-49 | -8.615850e-47 |
| Msa0113340 | Msa0484570 | 0.811814 | 5.799380e-51 | -8.615850e-47 |
| Msa0115550 | Msa0484570 | 0.855399 | 6.475514e-62 | -8.615850e-47 |
| Msa0120790 | Msa0484570 | 0.808425 | 3.116586e-50 | -8.615850e-47 |
| Msa0121330 | Msa0484570 | 0.818136 | 2.294883e-52 | -8.615850e-47 |
| Msa0126210 | Msa0484570 | 0.834658 | 2.639364e-56 | -8.615850e-47 |
| Msa0137880 | Msa0484570 | 0.817914 | 2.575007e-52 | -8.615850e-47 |
| Msa0140280 | Msa0484570 | 0.859418 | 4.194111e-63 | -8.615850e-47 |
| Msa0145060 | Msa0484570 | 0.811419 | 7.067315e-51 | -8.615850e-47 |
| Msa0146650 | Msa0484570 | 0.819223 | 1.300418e-52 | -8.615850e-47 |
| Msa0154620 | Msa0484570 | 0.839152 | 1.879527e-57 | -8.615850e-47 |
| Msa0158860 | Msa0484570 | 0.819903 | 9.094287e-53 | -8.615850e-47 |
| Msa0161930 | Msa0484570 | 0.817498 | 3.197148e-52 | -8.615850e-47 |
| Msa0165830 | Msa0484570 | 0.806994 | 6.275501e-50 | -8.615850e-47 |
| Msa0166170 | Msa0484570 | 0.817530 | 3.144335e-52 | -8.615850e-47 |
| Msa0190730 | Msa0484570 | 0.804981 | 1.664124e-49 | -8.615850e-47 |
| Msa0200050 | Msa0484570 | 0.819623 | 1.053930e-52 | -8.615850e-47 |
| Msa0213610 | Msa0484570 | 0.974379 | 4.721846e-138 | -8.615850e-47 |
| Msa0222560 | Msa0484570 | 0.810423 | 1.161108e-50 | -8.615850e-47 |
| Msa0232760 | Msa0484570 | 0.807782 | 4.272841e-50 | -8.615850e-47 |
| Msa0233020 | Msa0484570 | 0.807842 | 4.148286e-50 | -8.615850e-47 |
| Msa0233070 | Msa0484570 | 0.824241 | 8.981484e-54 | -8.615850e-47 |
| Msa0367520 | Msa0484570 | 0.844689 | 6.469483e-59 | -8.615850e-47 |
| Msa0373590 | Msa0484570 | 0.810587 | 1.070080e-50 | -8.615850e-47 |
| Msa0380670 | Msa0484570 | 0.864803 | 9.348052e-65 | -8.615850e-47 |
| Msa0381730 | Msa0484570 | 0.806817 | 6.842828e-50 | -8.615850e-47 |
| Msa0383000 | Msa0484570 | 0.806265 | 8.945431e-50 | -8.615850e-47 |
| Msa0390970 | Msa0484570 | 0.811247 | 7.702998e-51 | -8.615850e-47 |
| Msa0419540 | Msa0484570 | 0.818043 | 2.408716e-52 | -8.615850e-47 |
| Msa0426530 | Msa0484570 | 0.836704 | 8.006846e-57 | -8.615850e-47 |
| Msa0430300 | Msa0484570 | 0.854698 | 1.035183e-61 | -8.615850e-47 |
| Msa0430480 | Msa0484570 | 0.812159 | 4.877350e-51 | -8.615850e-47 |
| Msa0431200 | Msa0484570 | 0.827908 | 1.206363e-54 | -8.615850e-47 |
| Msa0432010 | Msa0484570 | 0.826141 | 3.191912e-54 | -8.615850e-47 |
| Msa0433150 | Msa0484570 | 0.803021 | 4.252957e-49 | -8.615850e-47 |
| Msa0443570 | Msa0484570 | 0.811139 | 8.130562e-51 | -8.615850e-47 |
| Msa0447870 | Msa0484570 | 0.806139 | 9.507889e-50 | -8.615850e-47 |
| Msa0468700 | Msa0484570 | 0.814796 | 1.283954e-51 | -8.615850e-47 |
| Msa0472950 | Msa0484570 | 0.808632 | 2.815643e-50 | -8.615850e-47 |
| Msa0476280 | Msa0484570 | 0.836386 | 9.647793e-57 | -8.615850e-47 |
| Msa0481140 | Msa0484570 | 0.805455 | 1.324191e-49 | -8.615850e-47 |
| Msa0481890 | Msa0484570 | 0.827654 | 1.388590e-54 | -8.615850e-47 |
| Msa0267110 | Msa0484570 | 0.808005 | 3.829826e-50 | -8.615850e-47 |
| Msa0269210 | Msa0484570 | 0.808116 | 3.627982e-50 | -8.615850e-47 |
| Msa0293040 | Msa0484570 | 0.994798 | 2.668106e-210 | -8.615850e-47 |
| Msa0301820 | Msa0484570 | 0.808050 | 3.746647e-50 | -8.615850e-47 |
| Msa0347530 | Msa0484570 | 0.802377 | 5.773727e-49 | -8.615850e-47 |
| Msa0483910 | Msa0484570 | 0.835528 | 1.592147e-56 | -8.615850e-47 |
| Msa0484570 | Msa0495300 | 0.818867 | 1.566847e-52 | -8.615850e-47 |
| Msa0484570 | Msa0509550 | 0.800962 | 1.126601e-48 | -8.615850e-47 |
| Msa0484570 | Msa0514580 | 0.827744 | 1.321135e-54 | -8.615850e-47 |
| Msa0484570 | Msa0517250 | 0.843194 | 1.627830e-58 | -8.615850e-47 |
| Msa0484570 | Msa0520260 | 0.837288 | 5.676999e-57 | -8.615850e-47 |
| Msa0484570 | Msa0520870 | 0.812453 | 4.206941e-51 | -8.615850e-47 |
| Msa0484570 | Msa0553750 | 0.847916 | 8.540216e-60 | -8.615850e-47 |
| Msa0484570 | Msa0561560 | 0.814482 | 1.506718e-51 | -8.615850e-47 |
| Msa0484570 | Msa0563940 | 0.807857 | 4.117712e-50 | -8.615850e-47 |
| Msa0484570 | Msa0567170 | 0.839522 | 1.507131e-57 | -8.615850e-47 |
| Msa0484570 | Msa0571620 | 0.821409 | 4.100258e-53 | -8.615850e-47 |
| Msa0484570 | Msa0580370 | 0.815269 | 1.007882e-51 | -8.615850e-47 |
| Msa0484570 | Msa0590200 | 0.833654 | 4.710339e-56 | -8.615850e-47 |
| Msa0484570 | Msa0606100 | 0.833135 | 6.347031e-56 | -8.615850e-47 |
| Msa0484570 | Msa0607800 | 0.863809 | 1.909142e-64 | -8.615850e-47 |
| Msa0484570 | Msa0620500 | 0.806053 | 9.914083e-50 | -8.615850e-47 |
| Msa0484570 | Msa0621710 | 0.834769 | 2.474199e-56 | -8.615850e-47 |
| Msa0484570 | Msa0647050 | 0.828488 | 8.745303e-55 | -8.615850e-47 |
| Msa0484570 | Msa0648040 | 0.858641 | 7.167751e-63 | -8.615850e-47 |
| Msa0484570 | Msa0654740 | 0.801444 | 8.979207e-49 | -8.615850e-47 |
| Msa0484570 | Msa0658640 | 0.836413 | 9.497852e-57 | -8.615850e-47 |
| Msa0484570 | Msa0668900 | 0.816009 | 6.895778e-52 | -8.615850e-47 |
| Msa0484570 | Msa0687090 | 0.845910 | 3.024355e-59 | -8.615850e-47 |
| Msa0484570 | Msa0688380 | 0.833016 | 6.792777e-56 | -8.615850e-47 |
| Msa0484570 | Msa0690740 | 0.860328 | 2.230710e-63 | -8.615850e-47 |
| Msa0484570 | Msa0698730 | 0.833674 | 4.657226e-56 | -8.615850e-47 |
| Msa0484570 | Msa0700460 | 0.826339 | 2.864828e-54 | -8.615850e-47 |
| Msa0484570 | Msa0703600 | 0.847414 | 1.174437e-59 | -8.615850e-47 |
| Msa0484570 | Msa0709200 | 0.844546 | 7.072151e-59 | -8.615850e-47 |
| Msa0484570 | Msa0709440 | 0.827619 | 1.415456e-54 | -8.615850e-47 |
| Msa0484570 | Msa0714520 | 0.814347 | 1.613425e-51 | -8.615850e-47 |
| Msa0484570 | Msa0735780 | 0.818728 | 1.684975e-52 | -8.615850e-47 |
| Msa0484570 | Msa0736890 | 0.800446 | 1.435744e-48 | -8.615850e-47 |
| Msa0484570 | Msa0740710 | 0.802793 | 4.740170e-49 | -8.615850e-47 |
| Msa0484570 | Msa0743440 | 0.833100 | 6.474614e-56 | -8.615850e-47 |
| Msa0484570 | Msa0745720 | 0.831158 | 1.956035e-55 | -8.615850e-47 |
| Msa0484570 | Msa0747740 | 0.814249 | 1.696120e-51 | -8.615850e-47 |
| Msa0484570 | Msa0754430 | 0.821295 | 4.357439e-53 | -8.615850e-47 |
| Msa0484570 | Msa0755760 | 0.817680 | 2.908884e-52 | -8.615850e-47 |
| Msa0484570 | Msa0757100 | 0.816489 | 5.385544e-52 | -8.615850e-47 |
| Msa0484570 | Msa0758650 | 0.835223 | 1.901706e-56 | -8.615850e-47 |
| Msa0484570 | Msa0773630 | 0.844216 | 8.670810e-59 | -8.615850e-47 |
| Msa0484570 | Msa0778550 | 0.821499 | 3.909042e-53 | -8.615850e-47 |
| Msa0484570 | Msa0780910 | 0.821889 | 3.175402e-53 | -8.615850e-47 |
| Msa0484570 | Msa0783930 | 0.814818 | 1.269134e-51 | -8.615850e-47 |
| Msa0484570 | Msa0787590 | 0.802335 | 5.891882e-49 | -8.615850e-47 |
| Msa0484570 | Msa0795870 | 0.814809 | 1.275429e-51 | -8.615850e-47 |
| Msa0484570 | Msa0798080 | 0.800140 | 1.657586e-48 | -8.615850e-47 |
| Msa0484570 | Msa0805680 | 0.809359 | 1.967010e-50 | -8.615850e-47 |
| Msa0484570 | Msa0811690 | 0.805064 | 1.598745e-49 | -8.615850e-47 |
| Msa0484570 | Msa0815920 | 0.814695 | 1.351280e-51 | -8.615850e-47 |
| Msa0484570 | Msa0818880 | 0.861966 | 7.072855e-64 | -8.615850e-47 |
| Msa0484570 | Msa0821160 | 0.807333 | 5.319221e-50 | -8.615850e-47 |
| Msa0484570 | Msa0824450 | 0.847100 | 1.431881e-59 | -8.615850e-47 |
| Msa0484570 | Msa0833650 | 0.809421 | 1.908091e-50 | -8.615850e-47 |
| Msa0484570 | Msa0838750 | 0.817858 | 2.651815e-52 | -8.615850e-47 |
| Msa0484570 | Msa0843050 | 0.817232 | 3.669089e-52 | -8.615850e-47 |
| Msa0484570 | Msa0855230 | 0.806118 | 9.606379e-50 | -8.615850e-47 |
| Msa0484570 | Msa0863620 | 0.864442 | 1.212592e-64 | -8.615850e-47 |
| Msa0484570 | Msa0867110 | 0.832608 | 8.578002e-56 | -8.615850e-47 |
| Msa0484570 | Msa0900760 | 0.812842 | 3.458156e-51 | -8.615850e-47 |
| Msa0484570 | Msa0909760 | 0.831853 | 1.318770e-55 | -8.615850e-47 |
| Msa0484570 | Msa0931590 | 0.832781 | 7.769251e-56 | -8.615850e-47 |
| Msa0484570 | Msa0966320 | 0.806544 | 7.811473e-50 | -8.615850e-47 |
| Msa0484570 | Msa0966480 | 0.809935 | 1.479392e-50 | -8.615850e-47 |
| Msa0484570 | Msa0981320 | 0.813416 | 2.587872e-51 | -8.615850e-47 |
| Msa0484570 | Msa1003740 | 0.820712 | 5.933205e-53 | -8.615850e-47 |
| Msa0484570 | Msa1003800 | 0.835817 | 1.345778e-56 | -8.615850e-47 |
| Msa0484570 | Msa1003930 | 0.821026 | 5.023386e-53 | -8.615850e-47 |
| Msa0484570 | Msa1021590 | 0.820642 | 6.157119e-53 | -8.615850e-47 |
| Msa0484570 | Msa1033920 | 0.821906 | 3.146558e-53 | -8.615850e-47 |
| Msa0484570 | Msa1035610 | 0.812007 | 5.264009e-51 | -8.615850e-47 |
| Msa0484570 | Msa1037540 | 0.802467 | 5.532697e-49 | -8.615850e-47 |
| Msa0484570 | Msa1039220 | 0.814230 | 1.712366e-51 | -8.615850e-47 |
| Msa0484570 | Msa1042160 | 0.880338 | 5.962193e-70 | -8.615850e-47 |
| Msa0484570 | Msa1042190 | 0.876178 | 1.717087e-68 | -8.615850e-47 |
| Msa0484570 | Msa1042880 | 0.860617 | 1.822677e-63 | -8.615850e-47 |
| Msa0484570 | Msa1056830 | 0.803134 | 4.030190e-49 | -8.615850e-47 |
| Msa0484570 | Msa1059020 | 0.820623 | 6.221129e-53 | -8.615850e-47 |
| Msa0484570 | Msa1072960 | 0.801959 | 7.038406e-49 | -8.615850e-47 |
| Msa0484570 | Msa1075520 | 0.828208 | 1.021644e-54 | -8.615850e-47 |
| Msa0484570 | Msa1076020 | 0.801604 | 8.326268e-49 | -8.615850e-47 |
| Msa0484570 | Msa1077990 | 0.802794 | 4.736795e-49 | -8.615850e-47 |
| Msa0484570 | Msa1078880 | 0.827498 | 1.513804e-54 | -8.615850e-47 |
| Msa0484570 | Msa1078970 | 0.833499 | 5.150067e-56 | -8.615850e-47 |
| Msa0484570 | Msa1080000 | 0.863202 | 2.946227e-64 | -8.615850e-47 |
| Msa0484570 | Msa1084530 | 0.837671 | 4.530761e-57 | -8.615850e-47 |
| Msa0484570 | Msa1094010 | 0.800132 | 1.663381e-48 | -8.615850e-47 |
| Msa0484570 | Msa1104110 | 0.811019 | 8.630698e-51 | -8.615850e-47 |
| Msa0484570 | Msa1116660 | 0.813978 | 1.946949e-51 | -8.615850e-47 |
| Msa0484570 | Msa1123210 | 0.831536 | 1.579329e-55 | -8.615850e-47 |
| Msa0484570 | Msa1125820 | 0.834374 | 3.110548e-56 | -8.615850e-47 |
| Msa0484570 | Msa1125990 | 0.829772 | 4.269562e-55 | -8.615850e-47 |
| Msa0484570 | Msa1127280 | 0.806813 | 6.854542e-50 | -8.615850e-47 |
| Msa0484570 | Msa1127470 | 0.836557 | 8.727108e-57 | -8.615850e-47 |
| Msa0484570 | Msa1130420 | 0.807122 | 5.897537e-50 | -8.615850e-47 |
| Msa0484570 | Msa1132530 | 0.857953 | 1.148708e-62 | -8.615850e-47 |
| Msa0484570 | Msa1132840 | 0.812844 | 3.455239e-51 | -8.615850e-47 |
| Msa0484570 | Msa1160910 | 0.817577 | 3.068707e-52 | -8.615850e-47 |
| Msa0484570 | Msa1162880 | 0.803914 | 2.777148e-49 | -8.615850e-47 |
| Msa0484570 | Msa1165480 | 0.807015 | 6.211497e-50 | -8.615850e-47 |
| Msa0484570 | Msa1167470 | 0.880426 | 5.545340e-70 | -8.615850e-47 |
| Msa0484570 | Msa1169190 | 0.830697 | 2.537295e-55 | -8.615850e-47 |
| Msa0484570 | Msa1171290 | 0.824597 | 7.403897e-54 | -8.615850e-47 |
| Msa0484570 | Msa1174670 | 0.810460 | 1.140172e-50 | -8.615850e-47 |
| Msa0484570 | Msa1186520 | 0.808998 | 2.351333e-50 | -8.615850e-47 |
| Msa0484570 | Msa1201540 | 0.801945 | 7.085441e-49 | -8.615850e-47 |
| Msa0484570 | Msa1201780 | 0.825486 | 4.565204e-54 | -8.615850e-47 |
| Msa0484570 | Msa1208950 | 0.801473 | 8.856638e-49 | -8.615850e-47 |
| Msa0484570 | Msa1213830 | 0.833318 | 5.712449e-56 | -8.615850e-47 |
| Msa0484570 | Msa1214350 | 0.839492 | 1.534282e-57 | -8.615850e-47 |
| Msa0484570 | Msa1215870 | 0.816743 | 4.724780e-52 | -8.615850e-47 |
| Msa0484570 | Msa1215980 | 0.806400 | 8.377977e-50 | -8.615850e-47 |
| Msa0484570 | Msa1216090 | 0.829368 | 5.351601e-55 | -8.615850e-47 |
| Msa0484570 | Msa1217910 | 0.817819 | 2.706066e-52 | -8.615850e-47 |
| Msa0484570 | Msa1226520 | 0.837371 | 5.406396e-57 | -8.615850e-47 |
| Msa0484570 | Msa1240770 | 0.857847 | 1.234712e-62 | -8.615850e-47 |
| Msa0484570 | Msa1244240 | 0.834407 | 3.051801e-56 | -8.615850e-47 |
| Msa0484570 | Msa1254540 | 0.829694 | 4.460393e-55 | -8.615850e-47 |
| Msa0484570 | Msa1262570 | 0.802231 | 6.189243e-49 | -8.615850e-47 |
| Msa0484570 | Msa1263740 | 0.806274 | 8.906149e-50 | -8.615850e-47 |
| Msa0484570 | Msa1263780 | 0.828626 | 8.095974e-55 | -8.615850e-47 |
| Msa0484570 | Msa1277640 | 0.801968 | 7.010009e-49 | -8.615850e-47 |
| Msa0484570 | Msa1279150 | 0.841933 | 3.518488e-58 | -8.615850e-47 |
| Msa0484570 | Msa1282260 | 0.824512 | 7.755653e-54 | -8.615850e-47 |
| Msa0484570 | Msa1300460 | 0.824795 | 6.650592e-54 | -8.615850e-47 |
| Msa0484570 | Msa1306570 | 0.829486 | 5.011380e-55 | -8.615850e-47 |
| Msa0484570 | Msa1315130 | 0.808010 | 3.820363e-50 | -8.615850e-47 |
| Msa0484570 | Msa1315160 | 0.809944 | 1.472728e-50 | -8.615850e-47 |
| Msa0484570 | Msa1321530 | 0.825999 | 3.449807e-54 | -8.615850e-47 |
| Msa0484570 | Msa1332950 | 0.802792 | 4.741852e-49 | -8.615850e-47 |
| Msa0484570 | Msa1339170 | 0.813174 | 2.925742e-51 | -8.615850e-47 |
| Msa0484570 | Msa1359690 | 0.814266 | 1.681975e-51 | -8.615850e-47 |
| Msa0484570 | Msa1359980 | 0.805028 | 1.626934e-49 | -8.615850e-47 |
| Msa0484570 | Msa1362130 | 0.836694 | 8.054106e-57 | -8.615850e-47 |
| Msa0484570 | Msa1366150 | 0.808965 | 2.389149e-50 | -8.615850e-47 |
| Msa0484570 | Msa1368750 | 0.827776 | 1.297665e-54 | -8.615850e-47 |
| Msa0484570 | Msa1374790 | 0.835666 | 1.469206e-56 | -8.615850e-47 |
| Msa0484570 | Msa1375350 | 0.829379 | 5.320409e-55 | -8.615850e-47 |
| Msa0484570 | Msa1381180 | 0.821104 | 4.820322e-53 | -8.615850e-47 |
| Msa0484570 | Msa1383310 | 0.818031 | 2.423419e-52 | -8.615850e-47 |
| Msa0484570 | Msa1384150 | 0.810376 | 1.188810e-50 | -8.615850e-47 |
| Msa0484570 | Msa1393780 | 0.838549 | 2.692236e-57 | -8.615850e-47 |
| Msa0484570 | Msa1409410 | 0.862252 | 5.779465e-64 | -8.615850e-47 |
| Msa0484570 | Msa1411790 | 0.805910 | 1.062467e-49 | -8.615850e-47 |
| Msa0484570 | Msa1429070 | 0.801680 | 8.031017e-49 | -8.615850e-47 |
| Msa0484570 | Msa1431480 | 0.808030 | 3.782743e-50 | -8.615850e-47 |
| Msa0484570 | Msa1440630 | 0.818733 | 1.680158e-52 | -8.615850e-47 |
| Msa0484570 | Msa1445120 | 0.830945 | 2.206528e-55 | -8.615850e-47 |
| Msa0484570 | Msa1450190 | 0.809235 | 2.091978e-50 | -8.615850e-47 |
| Msa0484570 | Msa1451820 | 0.836668 | 8.176071e-57 | -8.615850e-47 |
| Msa0484570 | Msa1462490 | 0.806967 | 6.359991e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484570 | MtrunA17_Chr2g0313891 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 5.63e-82 | 235 |
| Msa0484570 | MtrunA17_Chr8g0378371 | 41.880 | 117 | 59 | 4 | 1 | 112 | 1 | 113 | 4.04e-23 | 86.3 |
| Msa0484570 | MtrunA17_Chr8g0381081 | 42.268 | 97 | 53 | 2 | 19 | 113 | 47 | 142 | 3.61e-22 | 85.5 |
| Msa0484570 | MtrunA17_Chr7g0223961 | 48.193 | 83 | 42 | 1 | 29 | 110 | 364 | 446 | 2.12e-21 | 87.4 |
| Msa0484570 | MtrunA17_Chr8g0378381 | 44.565 | 92 | 50 | 1 | 22 | 112 | 24 | 115 | 7.97e-21 | 80.5 |
| Msa0484570 | MtrunA17_Chr1g0154991 | 40.449 | 89 | 52 | 1 | 25 | 112 | 15 | 103 | 7.96e-19 | 75.1 |
| Msa0484570 | MtrunA17_Chr1g0193131 | 45.161 | 93 | 48 | 3 | 17 | 108 | 408 | 498 | 5.31e-18 | 78.2 |
| Msa0484570 | MtrunA17_Chr6g0487261 | 41.758 | 91 | 49 | 2 | 25 | 112 | 365 | 454 | 7.05e-18 | 77.8 |
| Msa0484570 | MtrunA17_Chr4g0043511 | 39.535 | 86 | 51 | 1 | 28 | 112 | 418 | 503 | 1.26e-17 | 77.0 |
| Msa0484570 | MtrunA17_Chr3g0144531 | 41.176 | 85 | 49 | 1 | 30 | 113 | 371 | 455 | 2.65e-17 | 75.9 |
| Msa0484570 | MtrunA17_Chr8g0378401 | 40.860 | 93 | 54 | 1 | 22 | 113 | 24 | 116 | 2.99e-17 | 71.6 |
| Msa0484570 | MtrunA17_Chr3g0121271 | 37.374 | 99 | 60 | 1 | 17 | 113 | 349 | 447 | 4.37e-17 | 75.5 |
| Msa0484570 | MtrunA17_Chr1g0161011 | 36.634 | 101 | 60 | 2 | 17 | 113 | 346 | 446 | 6.46e-17 | 75.1 |
| Msa0484570 | MtrunA17_Chr8g0378361 | 36.607 | 112 | 63 | 3 | 5 | 112 | 6 | 113 | 8.25e-17 | 72.0 |
| Msa0484570 | MtrunA17_Chr2g0306311 | 43.529 | 85 | 46 | 2 | 27 | 110 | 396 | 479 | 9.50e-17 | 74.3 |
| Msa0484570 | MtrunA17_Chr4g0034901 | 40.000 | 85 | 49 | 1 | 30 | 112 | 375 | 459 | 1.07e-16 | 74.3 |
| Msa0484570 | MtrunA17_Chr7g0271411 | 45.882 | 85 | 43 | 2 | 30 | 112 | 160 | 243 | 1.22e-16 | 73.6 |
| Msa0484570 | MtrunA17_Chr1g0177171 | 40.206 | 97 | 55 | 2 | 17 | 110 | 392 | 488 | 1.38e-16 | 73.9 |
| Msa0484570 | MtrunA17_Chr5g0434591 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 1.56e-16 | 73.9 |
| Msa0484570 | MtrunA17_Chr8g0389741 | 35.294 | 102 | 63 | 2 | 13 | 112 | 352 | 452 | 2.14e-16 | 73.6 |
| Msa0484570 | MtrunA17_Chr4g0075031 | 39.080 | 87 | 51 | 1 | 28 | 112 | 380 | 466 | 5.59e-16 | 72.4 |
| Msa0484570 | MtrunA17_Chr3g0110371 | 36.000 | 100 | 60 | 2 | 17 | 112 | 346 | 445 | 8.90e-16 | 71.6 |
| Msa0484570 | MtrunA17_Chr5g0447651 | 32.432 | 111 | 67 | 2 | 4 | 112 | 10 | 114 | 4.69e-15 | 65.9 |
| Msa0484570 | MtrunA17_Chr5g0443331 | 37.895 | 95 | 56 | 2 | 20 | 112 | 98 | 191 | 5.59e-15 | 68.6 |
| Msa0484570 | MtrunA17_Chr4g0061401 | 41.667 | 84 | 47 | 2 | 30 | 112 | 24 | 106 | 1.14e-14 | 67.0 |
| Msa0484570 | MtrunA17_Chr3g0096451 | 37.363 | 91 | 54 | 2 | 24 | 112 | 106 | 195 | 1.37e-14 | 67.4 |
| Msa0484570 | MtrunA17_Chr4g0040911 | 37.500 | 88 | 53 | 1 | 27 | 112 | 34 | 121 | 1.72e-14 | 65.9 |
| Msa0484570 | MtrunA17_Chr5g0401301 | 39.326 | 89 | 51 | 1 | 27 | 112 | 326 | 414 | 5.22e-14 | 66.6 |
| Msa0484570 | MtrunA17_Chr3g0120401 | 36.905 | 84 | 52 | 1 | 30 | 112 | 157 | 240 | 8.36e-14 | 65.1 |
| Msa0484570 | MtrunA17_Chr8g0339191 | 36.264 | 91 | 48 | 3 | 28 | 112 | 372 | 458 | 1.21e-13 | 65.5 |
| Msa0484570 | MtrunA17_Chr1g0213651 | 38.095 | 84 | 51 | 1 | 30 | 112 | 276 | 359 | 2.30e-13 | 64.7 |
| Msa0484570 | MtrunA17_Chr2g0304061 | 42.353 | 85 | 47 | 2 | 30 | 113 | 158 | 241 | 9.57e-13 | 62.8 |
| Msa0484570 | MtrunA17_Chr5g0439251 | 37.500 | 80 | 48 | 1 | 29 | 106 | 381 | 460 | 9.91e-13 | 63.2 |
| Msa0484570 | MtrunA17_Chr4g0062771 | 37.931 | 87 | 52 | 2 | 27 | 112 | 371 | 456 | 9.94e-13 | 63.2 |
| Msa0484570 | MtrunA17_Chr8g0378621 | 36.538 | 104 | 62 | 2 | 13 | 112 | 345 | 448 | 1.25e-12 | 62.8 |
| Msa0484570 | MtrunA17_Chr4g0043151 | 34.545 | 110 | 61 | 5 | 6 | 112 | 4 | 105 | 1.02e-11 | 58.9 |
| Msa0484570 | MtrunA17_Chr2g0290821 | 34.940 | 83 | 53 | 1 | 30 | 112 | 369 | 450 | 5.99e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484570 | AT1G78520.1 | 63.158 | 114 | 40 | 2 | 1 | 112 | 1 | 114 | 1.39e-47 | 148 |
| Msa0484570 | AT2G43670.1 | 50.427 | 117 | 53 | 2 | 1 | 112 | 1 | 117 | 2.42e-37 | 122 |
| Msa0484570 | AT2G43660.2 | 45.378 | 119 | 58 | 3 | 1 | 112 | 1 | 119 | 8.87e-29 | 101 |
| Msa0484570 | AT2G43660.1 | 44.915 | 118 | 59 | 2 | 1 | 112 | 1 | 118 | 3.41e-28 | 99.8 |
| Msa0484570 | AT3G28250.1 | 53.247 | 77 | 36 | 0 | 30 | 106 | 3 | 79 | 7.17e-27 | 96.3 |
| Msa0484570 | AT4G09462.1 | 43.590 | 117 | 58 | 3 | 1 | 113 | 1 | 113 | 3.65e-26 | 94.4 |
| Msa0484570 | AT4G09464.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
| Msa0484570 | AT4G09467.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
| Msa0484570 | AT4G09465.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 1.51e-25 | 92.8 |
| Msa0484570 | AT5G53600.1 | 41.935 | 93 | 54 | 0 | 20 | 112 | 19 | 111 | 1.07e-23 | 88.2 |
| Msa0484570 | AT4G09466.1 | 41.739 | 115 | 65 | 2 | 1 | 113 | 1 | 115 | 1.24e-23 | 88.2 |
| Msa0484570 | AT4G09090.1 | 42.105 | 114 | 64 | 2 | 1 | 112 | 1 | 114 | 6.56e-23 | 86.3 |
| Msa0484570 | AT1G66852.1 | 42.045 | 88 | 48 | 2 | 28 | 113 | 24 | 110 | 4.11e-21 | 81.3 |
| Msa0484570 | AT1G66870.1 | 41.379 | 87 | 49 | 1 | 28 | 112 | 24 | 110 | 6.45e-21 | 80.9 |
| Msa0484570 | AT1G66870.2 | 41.379 | 87 | 49 | 1 | 28 | 112 | 51 | 137 | 1.02e-20 | 81.3 |
| Msa0484570 | AT1G09460.1 | 48.387 | 93 | 46 | 2 | 20 | 112 | 128 | 218 | 2.36e-20 | 84.0 |
| Msa0484570 | AT4G16165.1 | 40.909 | 88 | 50 | 1 | 28 | 113 | 24 | 111 | 1.04e-19 | 77.8 |
| Msa0484570 | AT4G05430.1 | 38.542 | 96 | 56 | 2 | 19 | 112 | 13 | 107 | 1.34e-19 | 78.6 |
| Msa0484570 | AT4G05430.3 | 38.542 | 96 | 56 | 2 | 19 | 112 | 38 | 132 | 1.97e-19 | 78.6 |
| Msa0484570 | AT5G53610.1 | 38.614 | 101 | 62 | 0 | 10 | 110 | 8 | 108 | 9.82e-19 | 75.5 |
| Msa0484570 | AT5G63225.1 | 42.391 | 92 | 52 | 1 | 22 | 112 | 17 | 108 | 1.04e-18 | 75.5 |
| Msa0484570 | AT1G66855.1 | 34.783 | 115 | 68 | 2 | 1 | 113 | 2 | 111 | 4.22e-18 | 73.9 |
| Msa0484570 | AT2G05790.1 | 42.708 | 96 | 52 | 2 | 17 | 110 | 372 | 466 | 1.45e-17 | 77.0 |
| Msa0484570 | AT5G63240.1 | 36.667 | 90 | 53 | 1 | 27 | 112 | 37 | 126 | 2.50e-17 | 72.4 |
| Msa0484570 | AT4G29360.1 | 39.080 | 87 | 51 | 1 | 28 | 112 | 389 | 475 | 3.36e-17 | 76.3 |
| Msa0484570 | AT4G29360.2 | 39.080 | 87 | 51 | 1 | 28 | 112 | 399 | 485 | 3.53e-17 | 76.3 |
| Msa0484570 | AT1G11820.2 | 36.792 | 106 | 63 | 2 | 11 | 112 | 360 | 465 | 6.63e-17 | 75.1 |
| Msa0484570 | AT5G24318.1 | 37.079 | 89 | 55 | 1 | 25 | 112 | 367 | 455 | 7.84e-17 | 75.1 |
| Msa0484570 | AT4G34480.3 | 36.905 | 84 | 52 | 1 | 30 | 112 | 253 | 336 | 1.38e-16 | 74.3 |
| Msa0484570 | AT4G34480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 364 | 447 | 1.68e-16 | 73.9 |
| Msa0484570 | AT5G24318.3 | 38.372 | 86 | 52 | 1 | 28 | 112 | 231 | 316 | 2.87e-16 | 72.8 |
| Msa0484570 | AT2G01630.1 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 2.98e-16 | 73.6 |
| Msa0484570 | AT4G05430.2 | 36.667 | 90 | 54 | 2 | 19 | 106 | 38 | 126 | 5.39e-16 | 68.9 |
| Msa0484570 | AT2G39640.1 | 37.000 | 100 | 59 | 2 | 15 | 110 | 341 | 440 | 6.53e-16 | 72.4 |
| Msa0484570 | AT2G39640.1 | 37.349 | 83 | 51 | 1 | 30 | 111 | 460 | 542 | 9.92e-16 | 72.0 |
| Msa0484570 | AT5G63230.1 | 39.535 | 86 | 51 | 1 | 28 | 112 | 24 | 109 | 7.65e-16 | 68.2 |
| Msa0484570 | AT5G55180.1 | 40.000 | 85 | 49 | 1 | 28 | 110 | 370 | 454 | 9.74e-16 | 72.0 |
| Msa0484570 | AT3G13560.4 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0484570 | AT3G13560.1 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0484570 | AT3G13560.2 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0484570 | AT3G13560.5 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0484570 | AT3G13560.3 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
| Msa0484570 | AT3G58100.1 | 30.841 | 107 | 69 | 2 | 8 | 112 | 22 | 125 | 2.75e-15 | 68.2 |
| Msa0484570 | AT1G18650.2 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 5.16e-15 | 66.2 |
| Msa0484570 | AT1G66250.1 | 34.831 | 89 | 56 | 1 | 27 | 113 | 365 | 453 | 6.84e-15 | 69.7 |
| Msa0484570 | AT2G29735.1 | 36.036 | 111 | 68 | 2 | 5 | 112 | 6 | 116 | 9.73e-15 | 65.5 |
| Msa0484570 | AT3G58100.2 | 30.841 | 107 | 69 | 2 | 8 | 112 | 98 | 201 | 9.79e-15 | 68.2 |
| Msa0484570 | AT1G18650.1 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 1.29e-14 | 66.6 |
| Msa0484570 | AT3G55430.1 | 38.095 | 84 | 51 | 1 | 30 | 112 | 366 | 449 | 1.71e-14 | 68.6 |
| Msa0484570 | AT2G01630.3 | 35.106 | 94 | 57 | 2 | 17 | 106 | 345 | 438 | 2.99e-14 | 67.8 |
| Msa0484570 | AT2G30933.1 | 34.314 | 102 | 64 | 2 | 13 | 112 | 65 | 165 | 5.70e-14 | 65.5 |
| Msa0484570 | AT1G11820.3 | 36.000 | 100 | 60 | 2 | 11 | 106 | 360 | 459 | 1.58e-13 | 65.5 |
| Msa0484570 | AT1G29380.3 | 37.931 | 87 | 49 | 3 | 30 | 113 | 148 | 232 | 1.99e-13 | 64.7 |
| Msa0484570 | AT2G16230.1 | 34.524 | 84 | 54 | 1 | 30 | 112 | 366 | 449 | 2.11e-13 | 65.5 |
| Msa0484570 | AT4G26830.2 | 39.286 | 84 | 49 | 1 | 29 | 110 | 370 | 453 | 2.20e-13 | 65.1 |
| Msa0484570 | AT4G26830.1 | 39.286 | 84 | 49 | 1 | 29 | 110 | 366 | 449 | 2.24e-13 | 65.1 |
| Msa0484570 | AT5G55180.2 | 39.506 | 81 | 47 | 1 | 28 | 106 | 370 | 450 | 2.39e-13 | 65.1 |
| Msa0484570 | AT1G79480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 311 | 394 | 2.46e-13 | 65.1 |
| Msa0484570 | AT1G79480.2 | 36.905 | 84 | 52 | 1 | 30 | 112 | 310 | 393 | 2.63e-13 | 65.1 |
| Msa0484570 | AT1G29380.1 | 38.372 | 86 | 48 | 3 | 30 | 112 | 148 | 231 | 2.82e-13 | 64.7 |
| Msa0484570 | AT5G67460.1 | 35.556 | 90 | 56 | 1 | 25 | 112 | 288 | 377 | 3.19e-13 | 64.7 |
| Msa0484570 | AT5G63250.1 | 36.782 | 87 | 51 | 1 | 30 | 112 | 42 | 128 | 3.95e-13 | 61.6 |
| Msa0484570 | AT5G35740.1 | 34.091 | 88 | 55 | 2 | 28 | 112 | 28 | 115 | 6.30e-13 | 60.8 |
| Msa0484570 | AT5G64790.1 | 34.483 | 87 | 55 | 2 | 27 | 112 | 366 | 451 | 6.61e-13 | 63.9 |
| Msa0484570 | AT4G13600.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 61 | 144 | 1.19e-12 | 62.0 |
| Msa0484570 | AT5G56590.1 | 35.294 | 85 | 53 | 1 | 30 | 112 | 369 | 453 | 1.28e-12 | 63.2 |
| Msa0484570 | AT5G24318.2 | 33.735 | 83 | 54 | 1 | 25 | 106 | 367 | 449 | 1.38e-12 | 62.8 |
| Msa0484570 | AT2G30933.2 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
| Msa0484570 | AT2G30933.3 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
| Msa0484570 | AT4G17180.1 | 38.554 | 83 | 50 | 1 | 30 | 112 | 359 | 440 | 3.98e-12 | 61.6 |
| Msa0484570 | AT3G24330.1 | 39.286 | 84 | 49 | 2 | 28 | 110 | 380 | 462 | 7.68e-12 | 60.8 |
| Msa0484570 | AT1G29380.4 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
| Msa0484570 | AT1G29380.2 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
| Msa0484570 | AT2G42930.1 | 35.106 | 94 | 59 | 2 | 14 | 106 | 24 | 116 | 1.25e-11 | 57.8 |
| Msa0484570 | AT5G67460.2 | 35.714 | 84 | 52 | 1 | 25 | 106 | 288 | 371 | 4.60e-11 | 58.5 |
| Msa0484570 | AT5G61130.1 | 31.765 | 85 | 57 | 1 | 29 | 112 | 20 | 104 | 9.46e-11 | 56.6 |
Find 38 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTATGCTATTTAATTTAAT+TGG | 0.086739 | 3_4:+1985800 | Msa0484570:three_prime_UTR |
| ATCAGTATCTTAACATTAAT+TGG | 0.154882 | 3_4:-1985959 | None:intergenic |
| CTCAAAATGGTTCAAAGTTA+AGG | 0.254271 | 3_4:-1985883 | None:intergenic |
| GGGAATATGATCATGGTTAA+TGG | 0.289090 | 3_4:+1985046 | Msa0484570:CDS |
| TAATTGGTGCAAAATTTAGA+TGG | 0.330321 | 3_4:-1985943 | None:intergenic |
| GGTTGTCATTTCAAACCATA+TGG | 0.351784 | 3_4:+1985822 | Msa0484570:three_prime_UTR |
| GTATGCTATTTAATTTAATT+GGG | 0.370890 | 3_4:+1985801 | Msa0484570:three_prime_UTR |
| ATTTCAAACCATATGGATAT+AGG | 0.376847 | 3_4:+1985829 | Msa0484570:three_prime_UTR |
| AGATCGATAATAGAGATTCA+TGG | 0.408516 | 3_4:-1985318 | None:intergenic |
| GGAATATGATCATGGTTAAT+GGG | 0.423180 | 3_4:+1985047 | Msa0484570:CDS |
| ACTGCATTTATGCATAGAAA+TGG | 0.427694 | 3_4:+1985738 | Msa0484570:exon |
| TCAAAATGGTTCAAAGTTAA+GGG | 0.430023 | 3_4:-1985882 | None:intergenic |
| TAGTGGTAGATTAGAGTGTG+TGG | 0.462093 | 3_4:-1984203 | None:intergenic |
| AATCTCTATTATCGATCTAA+AGG | 0.467046 | 3_4:+1985323 | Msa0484570:CDS |
| TATGATCATGGTTAATGGGC+AGG | 0.497346 | 3_4:+1985051 | Msa0484570:CDS |
| GATCTAAAGGAACGGACCAT+TGG | 0.511484 | 3_4:+1985336 | Msa0484570:CDS |
| AGCATATGCCTATATCCATA+TGG | 0.512895 | 3_4:-1985837 | None:intergenic |
| AGTGGTAGATTAGAGTGTGT+GGG | 0.523235 | 3_4:-1984202 | None:intergenic |
| TGATATATAGAAAGAGATAG+TGG | 0.528900 | 3_4:-1984220 | None:intergenic |
| ATTTGAGAGACAAGAAAAGA+AGG | 0.533155 | 3_4:-1984366 | None:intergenic |
| AGAGGTAGTTTAGCCATGGT+TGG | 0.534249 | 3_4:-1984334 | None:intergenic |
| AGTGTTGCTTGATCTGATGA+AGG | 0.538388 | 3_4:-1985191 | None:intergenic |
| CTCTGAAATCGCAGTTCCAA+TGG | 0.540263 | 3_4:-1985352 | None:intergenic |
| GAGAAGAGGTAGTTTAGCCA+TGG | 0.544546 | 3_4:-1984338 | None:intergenic |
| GATTGCAGAATTCTTCAGAA+AGG | 0.545548 | 3_4:+1985248 | Msa0484570:CDS |
| AGAGCAAGCATAATTGAGGT+TGG | 0.555744 | 3_4:-1985219 | None:intergenic |
| CATTGGAACTGCGATTTCAG+AGG | 0.562954 | 3_4:+1985353 | Msa0484570:CDS |
| TACAGGAGGGAATATGATCA+TGG | 0.563584 | 3_4:+1985039 | Msa0484570:intron |
| TTAGTACAAGGCTGCAGACA+AGG | 0.569573 | 3_4:+1984294 | Msa0484570:five_prime_UTR |
| ATAATAGAGATTCATGGCGA+TGG | 0.571419 | 3_4:-1985312 | None:intergenic |
| AGAGTGTGTGGGAGTGAGTG+TGG | 0.572831 | 3_4:-1984191 | None:intergenic |
| CGTGAGAGCAAGCATAATTG+AGG | 0.578215 | 3_4:-1985223 | None:intergenic |
| GCAGTACTGCTATTAGTACA+AGG | 0.603907 | 3_4:+1984282 | Msa0484570:five_prime_UTR |
| GATTCATGGCGATGGAAGCG+CGG | 0.609487 | 3_4:-1985304 | None:intergenic |
| CTATTATCGATCTAAAGGAA+CGG | 0.620629 | 3_4:+1985328 | Msa0484570:CDS |
| AGTACTGCTATACTATTCAG+TGG | 0.645630 | 3_4:-1984267 | None:intergenic |
| AACACAGAAAACTTGGTGCG+TGG | 0.648923 | 3_4:+1985163 | Msa0484570:intron |
| ATAACATCATCAACCAACCA+TGG | 0.661278 | 3_4:+1984321 | Msa0484570:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTAATTT+TGG | - | chr3_4:1984597-1984616 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAATTTAAT+TGG | - | chr3_4:1984930-1984949 | None:intergenic | 0.0% |
| !!! | AATTAAATTTTTTTTTTTTT+TGG | + | chr3_4:1984929-1984948 | Msa0484570:intron | 0.0% |
| !!! | ATTAAATTTTTTTTTTTTTT+GGG | + | chr3_4:1984930-1984949 | Msa0484570:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTAATTT+TGG | - | chr3_4:1984597-1984616 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAATTTAAT+TGG | - | chr3_4:1984930-1984949 | None:intergenic | 0.0% |
| !!! | AATTAAATTTTTTTTTTTTT+TGG | + | chr3_4:1984929-1984948 | Msa0484570:intron | 0.0% |
| !!! | ATTAAATTTTTTTTTTTTTT+GGG | + | chr3_4:1984930-1984949 | Msa0484570:intron | 0.0% |
| !! | TATTGAGATAAATTATTATA+AGG | - | chr3_4:1984777-1984796 | None:intergenic | 10.0% |
| !!! | GGTAATTTATATTTTTTTTT+AGG | - | chr3_4:1984902-1984921 | None:intergenic | 10.0% |
| !! | AAAAAAATTTAATTGGTTAA+TGG | - | chr3_4:1984923-1984942 | None:intergenic | 10.0% |
| !! | AAAAACTTTATGTAATTTAT+TGG | - | chr3_4:1985108-1985127 | None:intergenic | 10.0% |
| !! | TATTGAGATAAATTATTATA+AGG | - | chr3_4:1984777-1984796 | None:intergenic | 10.0% |
| !!! | GGTAATTTATATTTTTTTTT+AGG | - | chr3_4:1984902-1984921 | None:intergenic | 10.0% |
| !! | AAAAAAATTTAATTGGTTAA+TGG | - | chr3_4:1984923-1984942 | None:intergenic | 10.0% |
| !! | AAAAACTTTATGTAATTTAT+TGG | - | chr3_4:1985108-1985127 | None:intergenic | 10.0% |
| !!! | GTTAAATTTGAACATAATTT+TGG | - | chr3_4:1984650-1984669 | None:intergenic | 15.0% |
| !! | AAATTATGTTCAAATTTAAC+CGG | + | chr3_4:1984650-1984669 | Msa0484570:intron | 15.0% |
| !!! | AAATTACTAACATTTTCTTT+TGG | - | chr3_4:1984751-1984770 | None:intergenic | 15.0% |
| !! | TAATTAATATCACTAAACAT+TGG | - | chr3_4:1984827-1984846 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTAGGGAAAT+TGG | - | chr3_4:1984894-1984913 | None:intergenic | 15.0% |
| !!! | AGTATGCTATTTAATTTAAT+TGG | + | chr3_4:1985800-1985819 | Msa0484570:three_prime_UTR | 15.0% |
| !!! | GTATGCTATTTAATTTAATT+GGG | + | chr3_4:1985801-1985820 | Msa0484570:three_prime_UTR | 15.0% |
| !!! | GTTAAATTTGAACATAATTT+TGG | - | chr3_4:1984650-1984669 | None:intergenic | 15.0% |
| !! | AAATTATGTTCAAATTTAAC+CGG | + | chr3_4:1984650-1984669 | Msa0484570:intron | 15.0% |
| !!! | AAATTACTAACATTTTCTTT+TGG | - | chr3_4:1984751-1984770 | None:intergenic | 15.0% |
| !! | TAATTAATATCACTAAACAT+TGG | - | chr3_4:1984827-1984846 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTTTAGGGAAAT+TGG | - | chr3_4:1984894-1984913 | None:intergenic | 15.0% |
| !!! | AGTATGCTATTTAATTTAAT+TGG | + | chr3_4:1985800-1985819 | Msa0484570:three_prime_UTR | 15.0% |
| !!! | GTATGCTATTTAATTTAATT+GGG | + | chr3_4:1985801-1985820 | Msa0484570:three_prime_UTR | 15.0% |
| !! | GCATAATAATACTCATTATA+AGG | - | chr3_4:1984560-1984579 | None:intergenic | 20.0% |
| !!! | ATGTAATTTGCAAAGTAATA+TGG | + | chr3_4:1984722-1984741 | Msa0484570:intron | 20.0% |
| !!! | AGTATTTTTTTGACTCAAAA+TGG | - | chr3_4:1985899-1985918 | None:intergenic | 20.0% |
| !! | ATCAGTATCTTAACATTAAT+TGG | - | chr3_4:1985962-1985981 | None:intergenic | 20.0% |
| !! | GCATAATAATACTCATTATA+AGG | - | chr3_4:1984560-1984579 | None:intergenic | 20.0% |
| !!! | ATGTAATTTGCAAAGTAATA+TGG | + | chr3_4:1984722-1984741 | Msa0484570:intron | 20.0% |
| !!! | AGTATTTTTTTGACTCAAAA+TGG | - | chr3_4:1985899-1985918 | None:intergenic | 20.0% |
| !! | ATCAGTATCTTAACATTAAT+TGG | - | chr3_4:1985962-1985981 | None:intergenic | 20.0% |
| ! | TTTAAAAAGGAAACAATGGT+TGG | - | chr3_4:1984157-1984176 | None:intergenic | 25.0% |
| ! | TGATATATAGAAAGAGATAG+TGG | - | chr3_4:1984223-1984242 | None:intergenic | 25.0% |
| ! | GAGACAAACAAATTTAAAGA+AGG | - | chr3_4:1984418-1984437 | None:intergenic | 25.0% |
| ! | TTTATTACTAGAATCTGCTT+TGG | + | chr3_4:1984521-1984540 | Msa0484570:intron | 25.0% |
| !!! | TTTTTAGGGAAATTGGTTAA+TGG | - | chr3_4:1984887-1984906 | None:intergenic | 25.0% |
| ! | TATGAAAAACACAGAAAACT+TGG | + | chr3_4:1985156-1985175 | Msa0484570:intron | 25.0% |
| ! | AATCTCTATTATCGATCTAA+AGG | + | chr3_4:1985323-1985342 | Msa0484570:CDS | 25.0% |
| !!! | CCAATCATAGTTCTAATTTT+CGG | + | chr3_4:1985496-1985515 | Msa0484570:intron | 25.0% |
| ! | ATTTCAAACCATATGGATAT+AGG | + | chr3_4:1985829-1985848 | Msa0484570:three_prime_UTR | 25.0% |
| ! | TCAAAATGGTTCAAAGTTAA+GGG | - | chr3_4:1985885-1985904 | None:intergenic | 25.0% |
| ! | TAATTGGTGCAAAATTTAGA+TGG | - | chr3_4:1985946-1985965 | None:intergenic | 25.0% |
| ! | TTTAAAAAGGAAACAATGGT+TGG | - | chr3_4:1984157-1984176 | None:intergenic | 25.0% |
| ! | TGATATATAGAAAGAGATAG+TGG | - | chr3_4:1984223-1984242 | None:intergenic | 25.0% |
| ! | GAGACAAACAAATTTAAAGA+AGG | - | chr3_4:1984418-1984437 | None:intergenic | 25.0% |
| ! | TTTATTACTAGAATCTGCTT+TGG | + | chr3_4:1984521-1984540 | Msa0484570:intron | 25.0% |
| !!! | TTTTTAGGGAAATTGGTTAA+TGG | - | chr3_4:1984887-1984906 | None:intergenic | 25.0% |
| ! | TATGAAAAACACAGAAAACT+TGG | + | chr3_4:1985156-1985175 | Msa0484570:intron | 25.0% |
| ! | AATCTCTATTATCGATCTAA+AGG | + | chr3_4:1985323-1985342 | Msa0484570:CDS | 25.0% |
| !!! | CCAATCATAGTTCTAATTTT+CGG | + | chr3_4:1985496-1985515 | Msa0484570:intron | 25.0% |
| ! | ATTTCAAACCATATGGATAT+AGG | + | chr3_4:1985829-1985848 | Msa0484570:three_prime_UTR | 25.0% |
| ! | TCAAAATGGTTCAAAGTTAA+GGG | - | chr3_4:1985885-1985904 | None:intergenic | 25.0% |
| ! | TAATTGGTGCAAAATTTAGA+TGG | - | chr3_4:1985946-1985965 | None:intergenic | 25.0% |
| AATAAAGAGGGGGTTTAAAA+AGG | - | chr3_4:1984170-1984189 | None:intergenic | 30.0% | |
| AAAAGAAGGAAAAAGAGAAG+AGG | - | chr3_4:1984355-1984374 | None:intergenic | 30.0% | |
| ATTTGAGAGACAAGAAAAGA+AGG | - | chr3_4:1984369-1984388 | None:intergenic | 30.0% | |
| GTAATGTACTACATCTACAT+TGG | + | chr3_4:1984469-1984488 | Msa0484570:intron | 30.0% | |
| !!! | CTGGTCTCATTTTGTTTTTT+TGG | + | chr3_4:1984493-1984512 | Msa0484570:intron | 30.0% |
| GGAATATGATCATGGTTAAT+GGG | + | chr3_4:1985047-1985066 | Msa0484570:CDS | 30.0% | |
| AGATCGATAATAGAGATTCA+TGG | - | chr3_4:1985321-1985340 | None:intergenic | 30.0% | |
| CTATTATCGATCTAAAGGAA+CGG | + | chr3_4:1985328-1985347 | Msa0484570:CDS | 30.0% | |
| AATGAGTTATGTGACTTACT+TGG | - | chr3_4:1985404-1985423 | None:intergenic | 30.0% | |
| CCGAAAATTAGAACTATGAT+TGG | - | chr3_4:1985499-1985518 | None:intergenic | 30.0% | |
| CAACATTGTAACTGCAATTA+TGG | + | chr3_4:1985547-1985566 | Msa0484570:intron | 30.0% | |
| CCATGTGAACATCAATATTA+TGG | - | chr3_4:1985602-1985621 | None:intergenic | 30.0% | |
| CCATAATATTGATGTTCACA+TGG | + | chr3_4:1985599-1985618 | Msa0484570:intron | 30.0% | |
| !!! | TGGTTGATGGTTTTAAATTG+CGG | - | chr3_4:1985647-1985666 | None:intergenic | 30.0% |
| GTCATATCAAACTCGTAAAT+TGG | - | chr3_4:1985667-1985686 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATTCTGAATTGC+AGG | + | chr3_4:1985707-1985726 | Msa0484570:intron | 30.0% |
| ACTGCATTTATGCATAGAAA+TGG | + | chr3_4:1985738-1985757 | Msa0484570:exon | 30.0% | |
| CTCAAAATGGTTCAAAGTTA+AGG | - | chr3_4:1985886-1985905 | None:intergenic | 30.0% | |
| ACAACTAAAAATGAACGGAT+GGG | - | chr3_4:1986007-1986026 | None:intergenic | 30.0% | |
| AGACGACAACTAAAAATGAA+CGG | - | chr3_4:1986012-1986031 | None:intergenic | 30.0% | |
| !!! | CATTTTTAGTTGTCGTCTTT+TGG | + | chr3_4:1986014-1986033 | Msa0484570:three_prime_UTR | 30.0% |
| AATAAAGAGGGGGTTTAAAA+AGG | - | chr3_4:1984170-1984189 | None:intergenic | 30.0% | |
| AAAAGAAGGAAAAAGAGAAG+AGG | - | chr3_4:1984355-1984374 | None:intergenic | 30.0% | |
| ATTTGAGAGACAAGAAAAGA+AGG | - | chr3_4:1984369-1984388 | None:intergenic | 30.0% | |
| GTAATGTACTACATCTACAT+TGG | + | chr3_4:1984469-1984488 | Msa0484570:intron | 30.0% | |
| !!! | CTGGTCTCATTTTGTTTTTT+TGG | + | chr3_4:1984493-1984512 | Msa0484570:intron | 30.0% |
| GGAATATGATCATGGTTAAT+GGG | + | chr3_4:1985047-1985066 | Msa0484570:CDS | 30.0% | |
| AGATCGATAATAGAGATTCA+TGG | - | chr3_4:1985321-1985340 | None:intergenic | 30.0% | |
| CTATTATCGATCTAAAGGAA+CGG | + | chr3_4:1985328-1985347 | Msa0484570:CDS | 30.0% | |
| AATGAGTTATGTGACTTACT+TGG | - | chr3_4:1985404-1985423 | None:intergenic | 30.0% | |
| CCGAAAATTAGAACTATGAT+TGG | - | chr3_4:1985499-1985518 | None:intergenic | 30.0% | |
| CAACATTGTAACTGCAATTA+TGG | + | chr3_4:1985547-1985566 | Msa0484570:intron | 30.0% | |
| CCATGTGAACATCAATATTA+TGG | - | chr3_4:1985602-1985621 | None:intergenic | 30.0% | |
| CCATAATATTGATGTTCACA+TGG | + | chr3_4:1985599-1985618 | Msa0484570:intron | 30.0% | |
| !!! | TGGTTGATGGTTTTAAATTG+CGG | - | chr3_4:1985647-1985666 | None:intergenic | 30.0% |
| GTCATATCAAACTCGTAAAT+TGG | - | chr3_4:1985667-1985686 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATTCTGAATTGC+AGG | + | chr3_4:1985707-1985726 | Msa0484570:intron | 30.0% |
| ACTGCATTTATGCATAGAAA+TGG | + | chr3_4:1985738-1985757 | Msa0484570:exon | 30.0% | |
| CTCAAAATGGTTCAAAGTTA+AGG | - | chr3_4:1985886-1985905 | None:intergenic | 30.0% | |
| ACAACTAAAAATGAACGGAT+GGG | - | chr3_4:1986007-1986026 | None:intergenic | 30.0% | |
| AGACGACAACTAAAAATGAA+CGG | - | chr3_4:1986012-1986031 | None:intergenic | 30.0% | |
| !!! | CATTTTTAGTTGTCGTCTTT+TGG | + | chr3_4:1986014-1986033 | Msa0484570:three_prime_UTR | 30.0% |
| GGGGTTTAAAAAGGAAACAA+TGG | - | chr3_4:1984161-1984180 | None:intergenic | 35.0% | |
| AGTGAGTGTGGAAATAAAGA+GGG | - | chr3_4:1984182-1984201 | None:intergenic | 35.0% | |
| AGTACTGCTATACTATTCAG+TGG | - | chr3_4:1984270-1984289 | None:intergenic | 35.0% | |
| ATAACATCATCAACCAACCA+TGG | + | chr3_4:1984321-1984340 | Msa0484570:exon | 35.0% | |
| ! | CTTTTCTTGTCTCTCAAATC+AGG | + | chr3_4:1984370-1984389 | Msa0484570:CDS | 35.0% |
| TTGTTTAAGTGATCTGAGTC+CGG | - | chr3_4:1984672-1984691 | None:intergenic | 35.0% | |
| GGGAATATGATCATGGTTAA+TGG | + | chr3_4:1985046-1985065 | Msa0484570:CDS | 35.0% | |
| GATTGCAGAATTCTTCAGAA+AGG | + | chr3_4:1985248-1985267 | Msa0484570:CDS | 35.0% | |
| ATAATAGAGATTCATGGCGA+TGG | - | chr3_4:1985315-1985334 | None:intergenic | 35.0% | |
| !! | TATGATTGGTTTCGATGTCA+AGG | - | chr3_4:1985485-1985504 | None:intergenic | 35.0% |
| CAAACTCGTAAATTGGTTGA+TGG | - | chr3_4:1985660-1985679 | None:intergenic | 35.0% | |
| TCATTCTGAATTGCAGGTTA+TGG | + | chr3_4:1985713-1985732 | Msa0484570:intron | 35.0% | |
| ! | GGTTGTCATTTCAAACCATA+TGG | + | chr3_4:1985822-1985841 | Msa0484570:three_prime_UTR | 35.0% |
| AGCATATGCCTATATCCATA+TGG | - | chr3_4:1985840-1985859 | None:intergenic | 35.0% | |
| GACAACTAAAAATGAACGGA+TGG | - | chr3_4:1986008-1986027 | None:intergenic | 35.0% | |
| GGGGTTTAAAAAGGAAACAA+TGG | - | chr3_4:1984161-1984180 | None:intergenic | 35.0% | |
| AGTGAGTGTGGAAATAAAGA+GGG | - | chr3_4:1984182-1984201 | None:intergenic | 35.0% | |
| AGTACTGCTATACTATTCAG+TGG | - | chr3_4:1984270-1984289 | None:intergenic | 35.0% | |
| ATAACATCATCAACCAACCA+TGG | + | chr3_4:1984321-1984340 | Msa0484570:exon | 35.0% | |
| ! | CTTTTCTTGTCTCTCAAATC+AGG | + | chr3_4:1984370-1984389 | Msa0484570:CDS | 35.0% |
| TTGTTTAAGTGATCTGAGTC+CGG | - | chr3_4:1984672-1984691 | None:intergenic | 35.0% | |
| GGGAATATGATCATGGTTAA+TGG | + | chr3_4:1985046-1985065 | Msa0484570:CDS | 35.0% | |
| GATTGCAGAATTCTTCAGAA+AGG | + | chr3_4:1985248-1985267 | Msa0484570:CDS | 35.0% | |
| ATAATAGAGATTCATGGCGA+TGG | - | chr3_4:1985315-1985334 | None:intergenic | 35.0% | |
| !! | TATGATTGGTTTCGATGTCA+AGG | - | chr3_4:1985485-1985504 | None:intergenic | 35.0% |
| CAAACTCGTAAATTGGTTGA+TGG | - | chr3_4:1985660-1985679 | None:intergenic | 35.0% | |
| TCATTCTGAATTGCAGGTTA+TGG | + | chr3_4:1985713-1985732 | Msa0484570:intron | 35.0% | |
| ! | GGTTGTCATTTCAAACCATA+TGG | + | chr3_4:1985822-1985841 | Msa0484570:three_prime_UTR | 35.0% |
| AGCATATGCCTATATCCATA+TGG | - | chr3_4:1985840-1985859 | None:intergenic | 35.0% | |
| GACAACTAAAAATGAACGGA+TGG | - | chr3_4:1986008-1986027 | None:intergenic | 35.0% | |
| TGAGTGTGGAAATAAAGAGG+GGG | - | chr3_4:1984180-1984199 | None:intergenic | 40.0% | |
| GTGAGTGTGGAAATAAAGAG+GGG | - | chr3_4:1984181-1984200 | None:intergenic | 40.0% | |
| GAGTGAGTGTGGAAATAAAG+AGG | - | chr3_4:1984183-1984202 | None:intergenic | 40.0% | |
| AGTGGTAGATTAGAGTGTGT+GGG | - | chr3_4:1984205-1984224 | None:intergenic | 40.0% | |
| TAGTGGTAGATTAGAGTGTG+TGG | - | chr3_4:1984206-1984225 | None:intergenic | 40.0% | |
| GCAGTACTGCTATTAGTACA+AGG | + | chr3_4:1984282-1984301 | Msa0484570:five_prime_UTR | 40.0% | |
| GTACTACATCTACATTGGTC+TGG | + | chr3_4:1984474-1984493 | Msa0484570:intron | 40.0% | |
| ! | TTCCCTCTTTTGACATGTAC+AGG | + | chr3_4:1985022-1985041 | Msa0484570:intron | 40.0% |
| CTCCTGTACATGTCAAAAGA+GGG | - | chr3_4:1985027-1985046 | None:intergenic | 40.0% | |
| ! | CTCTTTTGACATGTACAGGA+GGG | + | chr3_4:1985026-1985045 | Msa0484570:intron | 40.0% |
| TACAGGAGGGAATATGATCA+TGG | + | chr3_4:1985039-1985058 | Msa0484570:intron | 40.0% | |
| ! | TATGATCATGGTTAATGGGC+AGG | + | chr3_4:1985051-1985070 | Msa0484570:CDS | 40.0% |
| !! | AGTGTTGCTTGATCTGATGA+AGG | - | chr3_4:1985194-1985213 | None:intergenic | 40.0% |
| AGAGCAAGCATAATTGAGGT+TGG | - | chr3_4:1985222-1985241 | None:intergenic | 40.0% | |
| !! | AGATTTTCAGGACTAGAGCA+GGG | - | chr3_4:1985278-1985297 | None:intergenic | 40.0% |
| TGTTGCATAGACCGCAATTA+TGG | - | chr3_4:1985529-1985548 | None:intergenic | 40.0% | |
| ACAAGCAAATGAAGTCGATG+CGG | - | chr3_4:1985573-1985592 | None:intergenic | 40.0% | |
| GTTCACATGGTAACTACAAC+CGG | + | chr3_4:1985612-1985631 | Msa0484570:intron | 40.0% | |
| TGAGTGTGGAAATAAAGAGG+GGG | - | chr3_4:1984180-1984199 | None:intergenic | 40.0% | |
| GTGAGTGTGGAAATAAAGAG+GGG | - | chr3_4:1984181-1984200 | None:intergenic | 40.0% | |
| GAGTGAGTGTGGAAATAAAG+AGG | - | chr3_4:1984183-1984202 | None:intergenic | 40.0% | |
| AGTGGTAGATTAGAGTGTGT+GGG | - | chr3_4:1984205-1984224 | None:intergenic | 40.0% | |
| TAGTGGTAGATTAGAGTGTG+TGG | - | chr3_4:1984206-1984225 | None:intergenic | 40.0% | |
| GCAGTACTGCTATTAGTACA+AGG | + | chr3_4:1984282-1984301 | Msa0484570:five_prime_UTR | 40.0% | |
| GTACTACATCTACATTGGTC+TGG | + | chr3_4:1984474-1984493 | Msa0484570:intron | 40.0% | |
| ! | TTCCCTCTTTTGACATGTAC+AGG | + | chr3_4:1985022-1985041 | Msa0484570:intron | 40.0% |
| CTCCTGTACATGTCAAAAGA+GGG | - | chr3_4:1985027-1985046 | None:intergenic | 40.0% | |
| ! | CTCTTTTGACATGTACAGGA+GGG | + | chr3_4:1985026-1985045 | Msa0484570:intron | 40.0% |
| TACAGGAGGGAATATGATCA+TGG | + | chr3_4:1985039-1985058 | Msa0484570:intron | 40.0% | |
| ! | TATGATCATGGTTAATGGGC+AGG | + | chr3_4:1985051-1985070 | Msa0484570:CDS | 40.0% |
| !! | AGTGTTGCTTGATCTGATGA+AGG | - | chr3_4:1985194-1985213 | None:intergenic | 40.0% |
| AGAGCAAGCATAATTGAGGT+TGG | - | chr3_4:1985222-1985241 | None:intergenic | 40.0% | |
| !! | AGATTTTCAGGACTAGAGCA+GGG | - | chr3_4:1985278-1985297 | None:intergenic | 40.0% |
| TGTTGCATAGACCGCAATTA+TGG | - | chr3_4:1985529-1985548 | None:intergenic | 40.0% | |
| ACAAGCAAATGAAGTCGATG+CGG | - | chr3_4:1985573-1985592 | None:intergenic | 40.0% | |
| GTTCACATGGTAACTACAAC+CGG | + | chr3_4:1985612-1985631 | Msa0484570:intron | 40.0% | |
| TTAGTACAAGGCTGCAGACA+AGG | + | chr3_4:1984294-1984313 | Msa0484570:five_prime_UTR | 45.0% | |
| AGAGGTAGTTTAGCCATGGT+TGG | - | chr3_4:1984337-1984356 | None:intergenic | 45.0% | |
| GAGAAGAGGTAGTTTAGCCA+TGG | - | chr3_4:1984341-1984360 | None:intergenic | 45.0% | |
| CCTCCTGTACATGTCAAAAG+AGG | - | chr3_4:1985028-1985047 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGACATGTACAGG+AGG | + | chr3_4:1985025-1985044 | Msa0484570:intron | 45.0% |
| !! | AACACAGAAAACTTGGTGCG+TGG | + | chr3_4:1985163-1985182 | Msa0484570:intron | 45.0% |
| CGTGAGAGCAAGCATAATTG+AGG | - | chr3_4:1985226-1985245 | None:intergenic | 45.0% | |
| !! | GATTTTCAGGACTAGAGCAG+GGG | - | chr3_4:1985277-1985296 | None:intergenic | 45.0% |
| !! | GAGATTTTCAGGACTAGAGC+AGG | - | chr3_4:1985279-1985298 | None:intergenic | 45.0% |
| GATCTAAAGGAACGGACCAT+TGG | + | chr3_4:1985336-1985355 | Msa0484570:CDS | 45.0% | |
| !! | CTCTGAAATCGCAGTTCCAA+TGG | - | chr3_4:1985355-1985374 | None:intergenic | 45.0% |
| CATTGGAACTGCGATTTCAG+AGG | + | chr3_4:1985353-1985372 | Msa0484570:CDS | 45.0% | |
| TCGGACTGCAACCATAATTG+CGG | + | chr3_4:1985515-1985534 | Msa0484570:intron | 45.0% | |
| TAAATTGCGGTTGCAACCAC+CGG | - | chr3_4:1985634-1985653 | None:intergenic | 45.0% | |
| TTAGTACAAGGCTGCAGACA+AGG | + | chr3_4:1984294-1984313 | Msa0484570:five_prime_UTR | 45.0% | |
| AGAGGTAGTTTAGCCATGGT+TGG | - | chr3_4:1984337-1984356 | None:intergenic | 45.0% | |
| GAGAAGAGGTAGTTTAGCCA+TGG | - | chr3_4:1984341-1984360 | None:intergenic | 45.0% | |
| CCTCCTGTACATGTCAAAAG+AGG | - | chr3_4:1985028-1985047 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGACATGTACAGG+AGG | + | chr3_4:1985025-1985044 | Msa0484570:intron | 45.0% |
| !! | AACACAGAAAACTTGGTGCG+TGG | + | chr3_4:1985163-1985182 | Msa0484570:intron | 45.0% |
| CGTGAGAGCAAGCATAATTG+AGG | - | chr3_4:1985226-1985245 | None:intergenic | 45.0% | |
| !! | GATTTTCAGGACTAGAGCAG+GGG | - | chr3_4:1985277-1985296 | None:intergenic | 45.0% |
| !! | GAGATTTTCAGGACTAGAGC+AGG | - | chr3_4:1985279-1985298 | None:intergenic | 45.0% |
| GATCTAAAGGAACGGACCAT+TGG | + | chr3_4:1985336-1985355 | Msa0484570:CDS | 45.0% | |
| !! | CTCTGAAATCGCAGTTCCAA+TGG | - | chr3_4:1985355-1985374 | None:intergenic | 45.0% |
| CATTGGAACTGCGATTTCAG+AGG | + | chr3_4:1985353-1985372 | Msa0484570:CDS | 45.0% | |
| TCGGACTGCAACCATAATTG+CGG | + | chr3_4:1985515-1985534 | Msa0484570:intron | 45.0% | |
| TAAATTGCGGTTGCAACCAC+CGG | - | chr3_4:1985634-1985653 | None:intergenic | 45.0% | |
| !!! | GTAATTTATATTTTTTTTTA+GGG | - | chr3_4:1984901-1984920 | None:intergenic | 5.0% |
| !!! | GTAATTTATATTTTTTTTTA+GGG | - | chr3_4:1984901-1984920 | None:intergenic | 5.0% |
| ! | GCGCGGTTCATGAGATTTTC+AGG | - | chr3_4:1985290-1985309 | None:intergenic | 50.0% |
| CACATGGTAACTACAACCGG+TGG | + | chr3_4:1985615-1985634 | Msa0484570:intron | 50.0% | |
| ! | GCGCGGTTCATGAGATTTTC+AGG | - | chr3_4:1985290-1985309 | None:intergenic | 50.0% |
| CACATGGTAACTACAACCGG+TGG | + | chr3_4:1985615-1985634 | Msa0484570:intron | 50.0% | |
| AGAGTGTGTGGGAGTGAGTG+TGG | - | chr3_4:1984194-1984213 | None:intergenic | 55.0% | |
| GATTCATGGCGATGGAAGCG+CGG | - | chr3_4:1985307-1985326 | None:intergenic | 55.0% | |
| AGAGTGTGTGGGAGTGAGTG+TGG | - | chr3_4:1984194-1984213 | None:intergenic | 55.0% | |
| GATTCATGGCGATGGAAGCG+CGG | - | chr3_4:1985307-1985326 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 1984153 | 1986133 | 1984153 | ID=Msa0484570;Name=Msa0484570 |
| chr3_4 | mRNA | 1984153 | 1986133 | 1984153 | ID=Msa0484570-mRNA-1;Parent=Msa0484570;Name=Msa0484570-mRNA-1;_AED=0.34;_eAED=0.34;_QI=160|1|1|1|0.75|0.6|5|379|113 |
| chr3_4 | exon | 1984153 | 1984163 | 1984153 | ID=Msa0484570-mRNA-1:exon:643;Parent=Msa0484570-mRNA-1 |
| chr3_4 | exon | 1984191 | 1984391 | 1984191 | ID=Msa0484570-mRNA-1:exon:644;Parent=Msa0484570-mRNA-1 |
| chr3_4 | exon | 1985044 | 1985072 | 1985044 | ID=Msa0484570-mRNA-1:exon:645;Parent=Msa0484570-mRNA-1 |
| chr3_4 | exon | 1985170 | 1985404 | 1985170 | ID=Msa0484570-mRNA-1:exon:646;Parent=Msa0484570-mRNA-1 |
| chr3_4 | exon | 1985729 | 1986133 | 1985729 | ID=Msa0484570-mRNA-1:exon:647;Parent=Msa0484570-mRNA-1 |
| chr3_4 | five_prime_UTR | 1984153 | 1984163 | 1984153 | ID=Msa0484570-mRNA-1:five_prime_utr;Parent=Msa0484570-mRNA-1 |
| chr3_4 | five_prime_UTR | 1984191 | 1984339 | 1984191 | ID=Msa0484570-mRNA-1:five_prime_utr;Parent=Msa0484570-mRNA-1 |
| chr3_4 | CDS | 1984340 | 1984391 | 1984340 | ID=Msa0484570-mRNA-1:cds;Parent=Msa0484570-mRNA-1 |
| chr3_4 | CDS | 1985044 | 1985072 | 1985044 | ID=Msa0484570-mRNA-1:cds;Parent=Msa0484570-mRNA-1 |
| chr3_4 | CDS | 1985170 | 1985404 | 1985170 | ID=Msa0484570-mRNA-1:cds;Parent=Msa0484570-mRNA-1 |
| chr3_4 | CDS | 1985729 | 1985754 | 1985729 | ID=Msa0484570-mRNA-1:cds;Parent=Msa0484570-mRNA-1 |
| chr3_4 | three_prime_UTR | 1985755 | 1986133 | 1985755 | ID=Msa0484570-mRNA-1:three_prime_utr;Parent=Msa0484570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
