Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0213610 | XP_013464448.2 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 6.13e-78 | 235 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0213610 | sp|P52409|E13B_WHEAT | 44.828 | 87 | 48 | 0 | 26 | 112 | 373 | 459 | 3.57e-21 | 90.1 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0213610 | I3SE25 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 2.93e-78 | 235 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003080 | Msa0213610 | 0.816814 | 4.554720e-52 | -8.615850e-47 |
Msa0014770 | Msa0213610 | 0.866893 | 2.043055e-65 | -8.615850e-47 |
Msa0016040 | Msa0213610 | 0.809472 | 1.860258e-50 | -8.615850e-47 |
Msa0025160 | Msa0213610 | 0.811951 | 5.413384e-51 | -8.615850e-47 |
Msa0025580 | Msa0213610 | 0.820650 | 6.131046e-53 | -8.615850e-47 |
Msa0032460 | Msa0213610 | 0.829549 | 4.838284e-55 | -8.615850e-47 |
Msa0032980 | Msa0213610 | 0.830103 | 3.544869e-55 | -8.615850e-47 |
Msa0033780 | Msa0213610 | 0.815138 | 1.077829e-51 | -8.615850e-47 |
Msa0035340 | Msa0213610 | 0.801097 | 1.057211e-48 | -8.615850e-47 |
Msa0035380 | Msa0213610 | 0.803935 | 2.748826e-49 | -8.615850e-47 |
Msa0037740 | Msa0213610 | 0.823223 | 1.555198e-53 | -8.615850e-47 |
Msa0048510 | Msa0213610 | 0.802495 | 5.461481e-49 | -8.615850e-47 |
Msa0050660 | Msa0213610 | 0.820823 | 5.596012e-53 | -8.615850e-47 |
Msa0050700 | Msa0213610 | 0.821186 | 4.614689e-53 | -8.615850e-47 |
Msa0050790 | Msa0213610 | 0.818493 | 1.904363e-52 | -8.615850e-47 |
Msa0053070 | Msa0213610 | 0.807231 | 5.593322e-50 | -8.615850e-47 |
Msa0062340 | Msa0213610 | 0.819876 | 9.224254e-53 | -8.615850e-47 |
Msa0065020 | Msa0213610 | 0.803742 | 3.014899e-49 | -8.615850e-47 |
Msa0067330 | Msa0213610 | 0.806099 | 9.698414e-50 | -8.615850e-47 |
Msa0073120 | Msa0213610 | 0.804485 | 2.111577e-49 | -8.615850e-47 |
Msa0077560 | Msa0213610 | 0.825608 | 4.273221e-54 | -8.615850e-47 |
Msa0080610 | Msa0213610 | 0.802311 | 5.957298e-49 | -8.615850e-47 |
Msa0091350 | Msa0213610 | 0.810404 | 1.172410e-50 | -8.615850e-47 |
Msa0098410 | Msa0213610 | 0.804205 | 2.415728e-49 | -8.615850e-47 |
Msa0110200 | Msa0213610 | 0.806017 | 1.009008e-49 | -8.615850e-47 |
Msa0113340 | Msa0213610 | 0.810923 | 9.053827e-51 | -8.615850e-47 |
Msa0115550 | Msa0213610 | 0.849814 | 2.539763e-60 | -8.615850e-47 |
Msa0120790 | Msa0213610 | 0.807079 | 6.022104e-50 | -8.615850e-47 |
Msa0121330 | Msa0213610 | 0.821576 | 3.751296e-53 | -8.615850e-47 |
Msa0126210 | Msa0213610 | 0.839105 | 1.932895e-57 | -8.615850e-47 |
Msa0128570 | Msa0213610 | 0.808687 | 2.739856e-50 | -8.615850e-47 |
Msa0140280 | Msa0213610 | 0.850347 | 1.800635e-60 | -8.615850e-47 |
Msa0146650 | Msa0213610 | 0.824149 | 9.436724e-54 | -8.615850e-47 |
Msa0154620 | Msa0213610 | 0.828881 | 7.024252e-55 | -8.615850e-47 |
Msa0156510 | Msa0213610 | 0.804924 | 1.709913e-49 | -8.615850e-47 |
Msa0161930 | Msa0213610 | 0.819808 | 9.562783e-53 | -8.615850e-47 |
Msa0165830 | Msa0213610 | 0.804691 | 1.912958e-49 | -8.615850e-47 |
Msa0166170 | Msa0213610 | 0.823079 | 1.680270e-53 | -8.615850e-47 |
Msa0174650 | Msa0213610 | 0.810578 | 1.075153e-50 | -8.615850e-47 |
Msa0190730 | Msa0213610 | 0.804998 | 1.650077e-49 | -8.615850e-47 |
Msa0200050 | Msa0213610 | 0.805198 | 1.498424e-49 | -8.615850e-47 |
Msa0213610 | Msa0232760 | 0.810478 | 1.129981e-50 | -8.615850e-47 |
Msa0213610 | Msa0233020 | 0.810135 | 1.339957e-50 | -8.615850e-47 |
Msa0213610 | Msa0233070 | 0.827800 | 1.280763e-54 | -8.615850e-47 |
Msa0213610 | Msa0269210 | 0.801489 | 8.788457e-49 | -8.615850e-47 |
Msa0213610 | Msa0272260 | 0.804105 | 2.533721e-49 | -8.615850e-47 |
Msa0213610 | Msa0293040 | 0.974938 | 4.799638e-139 | -8.615850e-47 |
Msa0213610 | Msa0301820 | 0.802832 | 4.652529e-49 | -8.615850e-47 |
Msa0213610 | Msa0330520 | 0.805081 | 1.585759e-49 | -8.615850e-47 |
Msa0213610 | Msa0347530 | 0.802628 | 5.126997e-49 | -8.615850e-47 |
Msa0213610 | Msa0367520 | 0.841067 | 5.947662e-58 | -8.615850e-47 |
Msa0213610 | Msa0373590 | 0.819754 | 9.834356e-53 | -8.615850e-47 |
Msa0213610 | Msa0380670 | 0.859642 | 3.590971e-63 | -8.615850e-47 |
Msa0213610 | Msa0381730 | 0.809083 | 2.254292e-50 | -8.615850e-47 |
Msa0213610 | Msa0382740 | 0.805201 | 1.496722e-49 | -8.615850e-47 |
Msa0213610 | Msa0382770 | 0.802612 | 5.165539e-49 | -8.615850e-47 |
Msa0213610 | Msa0383000 | 0.807599 | 4.673095e-50 | -8.615850e-47 |
Msa0213610 | Msa0390970 | 0.803471 | 3.431454e-49 | -8.615850e-47 |
Msa0213610 | Msa0419540 | 0.808315 | 3.290081e-50 | -8.615850e-47 |
Msa0213610 | Msa0421750 | 0.804914 | 1.718785e-49 | -8.615850e-47 |
Msa0213610 | Msa0426530 | 0.830599 | 2.681846e-55 | -8.615850e-47 |
Msa0213610 | Msa0430300 | 0.846518 | 2.065788e-59 | -8.615850e-47 |
Msa0213610 | Msa0430480 | 0.818720 | 1.691796e-52 | -8.615850e-47 |
Msa0213610 | Msa0431200 | 0.826302 | 2.922801e-54 | -8.615850e-47 |
Msa0213610 | Msa0432010 | 0.827077 | 1.909225e-54 | -8.615850e-47 |
Msa0213610 | Msa0443570 | 0.827050 | 1.937839e-54 | -8.615850e-47 |
Msa0213610 | Msa0447870 | 0.815782 | 7.747953e-52 | -8.615850e-47 |
Msa0213610 | Msa0468700 | 0.812722 | 3.675200e-51 | -8.615850e-47 |
Msa0213610 | Msa0476280 | 0.834495 | 2.899846e-56 | -8.615850e-47 |
Msa0213610 | Msa0481140 | 0.811873 | 5.630042e-51 | -8.615850e-47 |
Msa0213610 | Msa0481890 | 0.823936 | 1.059122e-53 | -8.615850e-47 |
Msa0213610 | Msa0483910 | 0.822727 | 2.029647e-53 | -8.615850e-47 |
Msa0213610 | Msa0484570 | 0.974379 | 4.721846e-138 | -8.615850e-47 |
Msa0213610 | Msa0495300 | 0.819863 | 9.288312e-53 | -8.615850e-47 |
Msa0213610 | Msa0514020 | 0.803538 | 3.324114e-49 | -8.615850e-47 |
Msa0213610 | Msa0514580 | 0.824036 | 1.003039e-53 | -8.615850e-47 |
Msa0213610 | Msa0517250 | 0.841791 | 3.835057e-58 | -8.615850e-47 |
Msa0213610 | Msa0520260 | 0.837575 | 4.793976e-57 | -8.615850e-47 |
Msa0213610 | Msa0520870 | 0.816800 | 4.587666e-52 | -8.615850e-47 |
Msa0213610 | Msa0525000 | 0.808793 | 2.600591e-50 | -8.615850e-47 |
Msa0213610 | Msa0534100 | 0.801773 | 7.686707e-49 | -8.615850e-47 |
Msa0213610 | Msa0553750 | 0.841779 | 3.862769e-58 | -8.615850e-47 |
Msa0213610 | Msa0561560 | 0.812962 | 3.255642e-51 | -8.615850e-47 |
Msa0213610 | Msa0567170 | 0.824261 | 8.883557e-54 | -8.615850e-47 |
Msa0213610 | Msa0571620 | 0.825291 | 5.079297e-54 | -8.615850e-47 |
Msa0213610 | Msa0577280 | 0.801021 | 1.095689e-48 | -8.615850e-47 |
Msa0213610 | Msa0577330 | 0.803171 | 3.958875e-49 | -8.615850e-47 |
Msa0213610 | Msa0590200 | 0.840451 | 8.629876e-58 | -8.615850e-47 |
Msa0213610 | Msa0606100 | 0.828983 | 6.635378e-55 | -8.615850e-47 |
Msa0213610 | Msa0607800 | 0.865273 | 6.655826e-65 | -8.615850e-47 |
Msa0213610 | Msa0620500 | 0.810932 | 9.011280e-51 | -8.615850e-47 |
Msa0213610 | Msa0621710 | 0.828760 | 7.514186e-55 | -8.615850e-47 |
Msa0213610 | Msa0622920 | 0.801389 | 9.214868e-49 | -8.615850e-47 |
Msa0213610 | Msa0647050 | 0.825708 | 4.045942e-54 | -8.615850e-47 |
Msa0213610 | Msa0648040 | 0.863148 | 3.060570e-64 | -8.615850e-47 |
Msa0213610 | Msa0654740 | 0.802544 | 5.335599e-49 | -8.615850e-47 |
Msa0213610 | Msa0658640 | 0.822414 | 2.399167e-53 | -8.615850e-47 |
Msa0213610 | Msa0668900 | 0.819540 | 1.100937e-52 | -8.615850e-47 |
Msa0213610 | Msa0687090 | 0.846335 | 2.317386e-59 | -8.615850e-47 |
Msa0213610 | Msa0688380 | 0.844144 | 9.067220e-59 | -8.615850e-47 |
Msa0213610 | Msa0690740 | 0.866863 | 2.089081e-65 | -8.615850e-47 |
Msa0213610 | Msa0698730 | 0.828197 | 1.027758e-54 | -8.615850e-47 |
Msa0213610 | Msa0700460 | 0.812295 | 4.556046e-51 | -8.615850e-47 |
Msa0213610 | Msa0703600 | 0.836737 | 7.851557e-57 | -8.615850e-47 |
Msa0213610 | Msa0709200 | 0.833759 | 4.433779e-56 | -8.615850e-47 |
Msa0213610 | Msa0709440 | 0.825507 | 4.513837e-54 | -8.615850e-47 |
Msa0213610 | Msa0714520 | 0.821187 | 4.613249e-53 | -8.615850e-47 |
Msa0213610 | Msa0730930 | 0.801572 | 8.452441e-49 | -8.615850e-47 |
Msa0213610 | Msa0735780 | 0.808534 | 2.954758e-50 | -8.615850e-47 |
Msa0213610 | Msa0743440 | 0.835501 | 1.617849e-56 | -8.615850e-47 |
Msa0213610 | Msa0745720 | 0.833219 | 6.047350e-56 | -8.615850e-47 |
Msa0213610 | Msa0747740 | 0.814323 | 1.633695e-51 | -8.615850e-47 |
Msa0213610 | Msa0754430 | 0.814610 | 1.411554e-51 | -8.615850e-47 |
Msa0213610 | Msa0756820 | 0.800089 | 1.697278e-48 | -8.615850e-47 |
Msa0213610 | Msa0757100 | 0.802047 | 6.753275e-49 | -8.615850e-47 |
Msa0213610 | Msa0758650 | 0.846818 | 1.710604e-59 | -8.615850e-47 |
Msa0213610 | Msa0773630 | 0.840670 | 7.561077e-58 | -8.615850e-47 |
Msa0213610 | Msa0778550 | 0.820602 | 6.290228e-53 | -8.615850e-47 |
Msa0213610 | Msa0780910 | 0.819989 | 8.691312e-53 | -8.615850e-47 |
Msa0213610 | Msa0783930 | 0.808361 | 3.216146e-50 | -8.615850e-47 |
Msa0213610 | Msa0787590 | 0.807278 | 5.465230e-50 | -8.615850e-47 |
Msa0213610 | Msa0805680 | 0.809312 | 2.013484e-50 | -8.615850e-47 |
Msa0213610 | Msa0818880 | 0.864683 | 1.018919e-64 | -8.615850e-47 |
Msa0213610 | Msa0821160 | 0.812734 | 3.652572e-51 | -8.615850e-47 |
Msa0213610 | Msa0824450 | 0.834157 | 3.525738e-56 | -8.615850e-47 |
Msa0213610 | Msa0836330 | 0.804053 | 2.597717e-49 | -8.615850e-47 |
Msa0213610 | Msa0843050 | 0.811287 | 7.548214e-51 | -8.615850e-47 |
Msa0213610 | Msa0863620 | 0.862862 | 3.752396e-64 | -8.615850e-47 |
Msa0213610 | Msa0867110 | 0.833868 | 4.164372e-56 | -8.615850e-47 |
Msa0213610 | Msa0900760 | 0.804186 | 2.437520e-49 | -8.615850e-47 |
Msa0213610 | Msa0909760 | 0.822123 | 2.803557e-53 | -8.615850e-47 |
Msa0213610 | Msa0931590 | 0.827685 | 1.364818e-54 | -8.615850e-47 |
Msa0213610 | Msa0981320 | 0.806425 | 8.279919e-50 | -8.615850e-47 |
Msa0213610 | Msa1003740 | 0.810014 | 1.422858e-50 | -8.615850e-47 |
Msa0213610 | Msa1003800 | 0.822305 | 2.543951e-53 | -8.615850e-47 |
Msa0213610 | Msa1003930 | 0.812514 | 4.080971e-51 | -8.615850e-47 |
Msa0213610 | Msa1033920 | 0.815368 | 9.583018e-52 | -8.615850e-47 |
Msa0213610 | Msa1035220 | 0.801065 | 1.073277e-48 | -8.615850e-47 |
Msa0213610 | Msa1035610 | 0.813546 | 2.423426e-51 | -8.615850e-47 |
Msa0213610 | Msa1039220 | 0.811542 | 6.645040e-51 | -8.615850e-47 |
Msa0213610 | Msa1042160 | 0.871317 | 7.494661e-67 | -8.615850e-47 |
Msa0213610 | Msa1042190 | 0.869285 | 3.472467e-66 | -8.615850e-47 |
Msa0213610 | Msa1042880 | 0.864766 | 9.602715e-65 | -8.615850e-47 |
Msa0213610 | Msa1056830 | 0.813220 | 2.858111e-51 | -8.615850e-47 |
Msa0213610 | Msa1059020 | 0.820493 | 6.662760e-53 | -8.615850e-47 |
Msa0213610 | Msa1075520 | 0.811272 | 7.606106e-51 | -8.615850e-47 |
Msa0213610 | Msa1076020 | 0.804002 | 2.662600e-49 | -8.615850e-47 |
Msa0213610 | Msa1078880 | 0.824222 | 9.074312e-54 | -8.615850e-47 |
Msa0213610 | Msa1078970 | 0.829288 | 5.599242e-55 | -8.615850e-47 |
Msa0213610 | Msa1080000 | 0.862983 | 3.442667e-64 | -8.615850e-47 |
Msa0213610 | Msa1084530 | 0.832302 | 1.021602e-55 | -8.615850e-47 |
Msa0213610 | Msa1104110 | 0.824418 | 8.160281e-54 | -8.615850e-47 |
Msa0213610 | Msa1123210 | 0.827821 | 1.265851e-54 | -8.615850e-47 |
Msa0213610 | Msa1125820 | 0.831133 | 1.983920e-55 | -8.615850e-47 |
Msa0213610 | Msa1125990 | 0.827123 | 1.860968e-54 | -8.615850e-47 |
Msa0213610 | Msa1127280 | 0.813742 | 2.194316e-51 | -8.615850e-47 |
Msa0213610 | Msa1127470 | 0.836597 | 8.524040e-57 | -8.615850e-47 |
Msa0213610 | Msa1130420 | 0.807193 | 5.695471e-50 | -8.615850e-47 |
Msa0213610 | Msa1132530 | 0.850162 | 2.028837e-60 | -8.615850e-47 |
Msa0213610 | Msa1160910 | 0.805948 | 1.043065e-49 | -8.615850e-47 |
Msa0213610 | Msa1165480 | 0.812541 | 4.026112e-51 | -8.615850e-47 |
Msa0213610 | Msa1167470 | 0.877152 | 7.898617e-69 | -8.615850e-47 |
Msa0213610 | Msa1169190 | 0.828500 | 8.687899e-55 | -8.615850e-47 |
Msa0213610 | Msa1171290 | 0.821822 | 3.291397e-53 | -8.615850e-47 |
Msa0213610 | Msa1174670 | 0.818418 | 1.981195e-52 | -8.615850e-47 |
Msa0213610 | Msa1201540 | 0.815879 | 7.373172e-52 | -8.615850e-47 |
Msa0213610 | Msa1201780 | 0.836440 | 9.345939e-57 | -8.615850e-47 |
Msa0213610 | Msa1213830 | 0.850665 | 1.466571e-60 | -8.615850e-47 |
Msa0213610 | Msa1214350 | 0.852494 | 4.449423e-61 | -8.615850e-47 |
Msa0213610 | Msa1215870 | 0.802385 | 5.753337e-49 | -8.615850e-47 |
Msa0213610 | Msa1215980 | 0.812057 | 5.132977e-51 | -8.615850e-47 |
Msa0213610 | Msa1216090 | 0.821773 | 3.379029e-53 | -8.615850e-47 |
Msa0213610 | Msa1217910 | 0.821011 | 5.066132e-53 | -8.615850e-47 |
Msa0213610 | Msa1218820 | 0.805091 | 1.578256e-49 | -8.615850e-47 |
Msa0213610 | Msa1223390 | 0.801140 | 1.036384e-48 | -8.615850e-47 |
Msa0213610 | Msa1226520 | 0.821568 | 3.767434e-53 | -8.615850e-47 |
Msa0213610 | Msa1234870 | 0.808625 | 2.824510e-50 | -8.615850e-47 |
Msa0213610 | Msa1240770 | 0.833799 | 4.334239e-56 | -8.615850e-47 |
Msa0213610 | Msa1244240 | 0.829148 | 6.054938e-55 | -8.615850e-47 |
Msa0213610 | Msa1254540 | 0.833174 | 6.204374e-56 | -8.615850e-47 |
Msa0213610 | Msa1261050 | 0.806860 | 6.700754e-50 | -8.615850e-47 |
Msa0213610 | Msa1262570 | 0.802813 | 4.694107e-49 | -8.615850e-47 |
Msa0213610 | Msa1263740 | 0.813613 | 2.342311e-51 | -8.615850e-47 |
Msa0213610 | Msa1263780 | 0.834017 | 3.821404e-56 | -8.615850e-47 |
Msa0213610 | Msa1279150 | 0.842180 | 3.026798e-58 | -8.615850e-47 |
Msa0213610 | Msa1294790 | 0.813939 | 1.985142e-51 | -8.615850e-47 |
Msa0213610 | Msa1300460 | 0.835004 | 2.159270e-56 | -8.615850e-47 |
Msa0213610 | Msa1306570 | 0.833893 | 4.103970e-56 | -8.615850e-47 |
Msa0213610 | Msa1315130 | 0.812459 | 4.195251e-51 | -8.615850e-47 |
Msa0213610 | Msa1315160 | 0.812889 | 3.377742e-51 | -8.615850e-47 |
Msa0213610 | Msa1321530 | 0.831781 | 1.374053e-55 | -8.615850e-47 |
Msa0213610 | Msa1332950 | 0.809162 | 2.168916e-50 | -8.615850e-47 |
Msa0213610 | Msa1339170 | 0.824063 | 9.887816e-54 | -8.615850e-47 |
Msa0213610 | Msa1362130 | 0.836550 | 8.763023e-57 | -8.615850e-47 |
Msa0213610 | Msa1364680 | 0.805477 | 1.310272e-49 | -8.615850e-47 |
Msa0213610 | Msa1366150 | 0.811947 | 5.426309e-51 | -8.615850e-47 |
Msa0213610 | Msa1368750 | 0.829160 | 6.013031e-55 | -8.615850e-47 |
Msa0213610 | Msa1374790 | 0.834156 | 3.526832e-56 | -8.615850e-47 |
Msa0213610 | Msa1375350 | 0.831994 | 1.217254e-55 | -8.615850e-47 |
Msa0213610 | Msa1381180 | 0.803609 | 3.212102e-49 | -8.615850e-47 |
Msa0213610 | Msa1383310 | 0.810694 | 1.014883e-50 | -8.615850e-47 |
Msa0213610 | Msa1384150 | 0.813096 | 3.042003e-51 | -8.615850e-47 |
Msa0213610 | Msa1387440 | 0.806438 | 8.226868e-50 | -8.615850e-47 |
Msa0213610 | Msa1393780 | 0.844457 | 7.469319e-59 | -8.615850e-47 |
Msa0213610 | Msa1409410 | 0.847584 | 1.054384e-59 | -8.615850e-47 |
Msa0213610 | Msa1411790 | 0.806068 | 9.842380e-50 | -8.615850e-47 |
Msa0213610 | Msa1426320 | 0.808645 | 2.796975e-50 | -8.615850e-47 |
Msa0213610 | Msa1431480 | 0.804513 | 2.084264e-49 | -8.615850e-47 |
Msa0213610 | Msa1440630 | 0.816390 | 5.667344e-52 | -8.615850e-47 |
Msa0213610 | Msa1445120 | 0.832842 | 7.503422e-56 | -8.615850e-47 |
Msa0213610 | Msa1450190 | 0.805647 | 1.206622e-49 | -8.615850e-47 |
Msa0213610 | Msa1451820 | 0.836833 | 7.421006e-57 | -8.615850e-47 |
Msa0213610 | Msa1462490 | 0.803613 | 3.206737e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0213610 | MtrunA17_Chr2g0313891 | 98.230 | 113 | 2 | 0 | 1 | 113 | 1 | 113 | 5.63e-82 | 235 |
Msa0213610 | MtrunA17_Chr8g0378371 | 41.880 | 117 | 59 | 4 | 1 | 112 | 1 | 113 | 4.04e-23 | 86.3 |
Msa0213610 | MtrunA17_Chr8g0381081 | 42.268 | 97 | 53 | 2 | 19 | 113 | 47 | 142 | 3.61e-22 | 85.5 |
Msa0213610 | MtrunA17_Chr7g0223961 | 48.193 | 83 | 42 | 1 | 29 | 110 | 364 | 446 | 2.12e-21 | 87.4 |
Msa0213610 | MtrunA17_Chr8g0378381 | 44.565 | 92 | 50 | 1 | 22 | 112 | 24 | 115 | 7.97e-21 | 80.5 |
Msa0213610 | MtrunA17_Chr1g0154991 | 40.449 | 89 | 52 | 1 | 25 | 112 | 15 | 103 | 7.96e-19 | 75.1 |
Msa0213610 | MtrunA17_Chr1g0193131 | 45.161 | 93 | 48 | 3 | 17 | 108 | 408 | 498 | 5.31e-18 | 78.2 |
Msa0213610 | MtrunA17_Chr6g0487261 | 41.758 | 91 | 49 | 2 | 25 | 112 | 365 | 454 | 7.05e-18 | 77.8 |
Msa0213610 | MtrunA17_Chr4g0043511 | 39.535 | 86 | 51 | 1 | 28 | 112 | 418 | 503 | 1.26e-17 | 77.0 |
Msa0213610 | MtrunA17_Chr3g0144531 | 41.176 | 85 | 49 | 1 | 30 | 113 | 371 | 455 | 2.65e-17 | 75.9 |
Msa0213610 | MtrunA17_Chr8g0378401 | 40.860 | 93 | 54 | 1 | 22 | 113 | 24 | 116 | 2.99e-17 | 71.6 |
Msa0213610 | MtrunA17_Chr3g0121271 | 37.374 | 99 | 60 | 1 | 17 | 113 | 349 | 447 | 4.37e-17 | 75.5 |
Msa0213610 | MtrunA17_Chr1g0161011 | 36.634 | 101 | 60 | 2 | 17 | 113 | 346 | 446 | 6.46e-17 | 75.1 |
Msa0213610 | MtrunA17_Chr8g0378361 | 36.607 | 112 | 63 | 3 | 5 | 112 | 6 | 113 | 8.25e-17 | 72.0 |
Msa0213610 | MtrunA17_Chr2g0306311 | 43.529 | 85 | 46 | 2 | 27 | 110 | 396 | 479 | 9.50e-17 | 74.3 |
Msa0213610 | MtrunA17_Chr4g0034901 | 40.000 | 85 | 49 | 1 | 30 | 112 | 375 | 459 | 1.07e-16 | 74.3 |
Msa0213610 | MtrunA17_Chr7g0271411 | 45.882 | 85 | 43 | 2 | 30 | 112 | 160 | 243 | 1.22e-16 | 73.6 |
Msa0213610 | MtrunA17_Chr1g0177171 | 40.206 | 97 | 55 | 2 | 17 | 110 | 392 | 488 | 1.38e-16 | 73.9 |
Msa0213610 | MtrunA17_Chr5g0434591 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 1.56e-16 | 73.9 |
Msa0213610 | MtrunA17_Chr8g0389741 | 35.294 | 102 | 63 | 2 | 13 | 112 | 352 | 452 | 2.14e-16 | 73.6 |
Msa0213610 | MtrunA17_Chr4g0075031 | 39.080 | 87 | 51 | 1 | 28 | 112 | 380 | 466 | 5.59e-16 | 72.4 |
Msa0213610 | MtrunA17_Chr3g0110371 | 36.000 | 100 | 60 | 2 | 17 | 112 | 346 | 445 | 8.90e-16 | 71.6 |
Msa0213610 | MtrunA17_Chr5g0447651 | 32.432 | 111 | 67 | 2 | 4 | 112 | 10 | 114 | 4.69e-15 | 65.9 |
Msa0213610 | MtrunA17_Chr5g0443331 | 37.895 | 95 | 56 | 2 | 20 | 112 | 98 | 191 | 5.59e-15 | 68.6 |
Msa0213610 | MtrunA17_Chr4g0061401 | 41.667 | 84 | 47 | 2 | 30 | 112 | 24 | 106 | 1.14e-14 | 67.0 |
Msa0213610 | MtrunA17_Chr3g0096451 | 37.363 | 91 | 54 | 2 | 24 | 112 | 106 | 195 | 1.37e-14 | 67.4 |
Msa0213610 | MtrunA17_Chr4g0040911 | 37.500 | 88 | 53 | 1 | 27 | 112 | 34 | 121 | 1.72e-14 | 65.9 |
Msa0213610 | MtrunA17_Chr5g0401301 | 39.326 | 89 | 51 | 1 | 27 | 112 | 326 | 414 | 5.22e-14 | 66.6 |
Msa0213610 | MtrunA17_Chr3g0120401 | 36.905 | 84 | 52 | 1 | 30 | 112 | 157 | 240 | 8.36e-14 | 65.1 |
Msa0213610 | MtrunA17_Chr8g0339191 | 36.264 | 91 | 48 | 3 | 28 | 112 | 372 | 458 | 1.21e-13 | 65.5 |
Msa0213610 | MtrunA17_Chr1g0213651 | 38.095 | 84 | 51 | 1 | 30 | 112 | 276 | 359 | 2.30e-13 | 64.7 |
Msa0213610 | MtrunA17_Chr2g0304061 | 42.353 | 85 | 47 | 2 | 30 | 113 | 158 | 241 | 9.57e-13 | 62.8 |
Msa0213610 | MtrunA17_Chr5g0439251 | 37.500 | 80 | 48 | 1 | 29 | 106 | 381 | 460 | 9.91e-13 | 63.2 |
Msa0213610 | MtrunA17_Chr4g0062771 | 37.931 | 87 | 52 | 2 | 27 | 112 | 371 | 456 | 9.94e-13 | 63.2 |
Msa0213610 | MtrunA17_Chr8g0378621 | 36.538 | 104 | 62 | 2 | 13 | 112 | 345 | 448 | 1.25e-12 | 62.8 |
Msa0213610 | MtrunA17_Chr4g0043151 | 34.545 | 110 | 61 | 5 | 6 | 112 | 4 | 105 | 1.02e-11 | 58.9 |
Msa0213610 | MtrunA17_Chr2g0290821 | 34.940 | 83 | 53 | 1 | 30 | 112 | 369 | 450 | 5.99e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0213610 | AT1G78520.1 | 63.158 | 114 | 40 | 2 | 1 | 112 | 1 | 114 | 1.39e-47 | 148 |
Msa0213610 | AT2G43670.1 | 50.427 | 117 | 53 | 2 | 1 | 112 | 1 | 117 | 2.42e-37 | 122 |
Msa0213610 | AT2G43660.2 | 45.378 | 119 | 58 | 3 | 1 | 112 | 1 | 119 | 8.87e-29 | 101 |
Msa0213610 | AT2G43660.1 | 44.915 | 118 | 59 | 2 | 1 | 112 | 1 | 118 | 3.41e-28 | 99.8 |
Msa0213610 | AT3G28250.1 | 53.247 | 77 | 36 | 0 | 30 | 106 | 3 | 79 | 7.17e-27 | 96.3 |
Msa0213610 | AT4G09462.1 | 43.590 | 117 | 58 | 3 | 1 | 113 | 1 | 113 | 3.65e-26 | 94.4 |
Msa0213610 | AT4G09464.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
Msa0213610 | AT4G09467.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 8.83e-26 | 93.6 |
Msa0213610 | AT4G09465.1 | 43.478 | 115 | 63 | 2 | 1 | 113 | 1 | 115 | 1.51e-25 | 92.8 |
Msa0213610 | AT5G53600.1 | 41.935 | 93 | 54 | 0 | 20 | 112 | 19 | 111 | 1.07e-23 | 88.2 |
Msa0213610 | AT4G09466.1 | 41.739 | 115 | 65 | 2 | 1 | 113 | 1 | 115 | 1.24e-23 | 88.2 |
Msa0213610 | AT4G09090.1 | 42.105 | 114 | 64 | 2 | 1 | 112 | 1 | 114 | 6.56e-23 | 86.3 |
Msa0213610 | AT1G66852.1 | 42.045 | 88 | 48 | 2 | 28 | 113 | 24 | 110 | 4.11e-21 | 81.3 |
Msa0213610 | AT1G66870.1 | 41.379 | 87 | 49 | 1 | 28 | 112 | 24 | 110 | 6.45e-21 | 80.9 |
Msa0213610 | AT1G66870.2 | 41.379 | 87 | 49 | 1 | 28 | 112 | 51 | 137 | 1.02e-20 | 81.3 |
Msa0213610 | AT1G09460.1 | 48.387 | 93 | 46 | 2 | 20 | 112 | 128 | 218 | 2.36e-20 | 84.0 |
Msa0213610 | AT4G16165.1 | 40.909 | 88 | 50 | 1 | 28 | 113 | 24 | 111 | 1.04e-19 | 77.8 |
Msa0213610 | AT4G05430.1 | 38.542 | 96 | 56 | 2 | 19 | 112 | 13 | 107 | 1.34e-19 | 78.6 |
Msa0213610 | AT4G05430.3 | 38.542 | 96 | 56 | 2 | 19 | 112 | 38 | 132 | 1.97e-19 | 78.6 |
Msa0213610 | AT5G53610.1 | 38.614 | 101 | 62 | 0 | 10 | 110 | 8 | 108 | 9.82e-19 | 75.5 |
Msa0213610 | AT5G63225.1 | 42.391 | 92 | 52 | 1 | 22 | 112 | 17 | 108 | 1.04e-18 | 75.5 |
Msa0213610 | AT1G66855.1 | 34.783 | 115 | 68 | 2 | 1 | 113 | 2 | 111 | 4.22e-18 | 73.9 |
Msa0213610 | AT2G05790.1 | 42.708 | 96 | 52 | 2 | 17 | 110 | 372 | 466 | 1.45e-17 | 77.0 |
Msa0213610 | AT5G63240.1 | 36.667 | 90 | 53 | 1 | 27 | 112 | 37 | 126 | 2.50e-17 | 72.4 |
Msa0213610 | AT4G29360.1 | 39.080 | 87 | 51 | 1 | 28 | 112 | 389 | 475 | 3.36e-17 | 76.3 |
Msa0213610 | AT4G29360.2 | 39.080 | 87 | 51 | 1 | 28 | 112 | 399 | 485 | 3.53e-17 | 76.3 |
Msa0213610 | AT1G11820.2 | 36.792 | 106 | 63 | 2 | 11 | 112 | 360 | 465 | 6.63e-17 | 75.1 |
Msa0213610 | AT5G24318.1 | 37.079 | 89 | 55 | 1 | 25 | 112 | 367 | 455 | 7.84e-17 | 75.1 |
Msa0213610 | AT4G34480.3 | 36.905 | 84 | 52 | 1 | 30 | 112 | 253 | 336 | 1.38e-16 | 74.3 |
Msa0213610 | AT4G34480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 364 | 447 | 1.68e-16 | 73.9 |
Msa0213610 | AT5G24318.3 | 38.372 | 86 | 52 | 1 | 28 | 112 | 231 | 316 | 2.87e-16 | 72.8 |
Msa0213610 | AT2G01630.1 | 35.000 | 100 | 61 | 2 | 17 | 112 | 345 | 444 | 2.98e-16 | 73.6 |
Msa0213610 | AT4G05430.2 | 36.667 | 90 | 54 | 2 | 19 | 106 | 38 | 126 | 5.39e-16 | 68.9 |
Msa0213610 | AT2G39640.1 | 37.000 | 100 | 59 | 2 | 15 | 110 | 341 | 440 | 6.53e-16 | 72.4 |
Msa0213610 | AT2G39640.1 | 37.349 | 83 | 51 | 1 | 30 | 111 | 460 | 542 | 9.92e-16 | 72.0 |
Msa0213610 | AT5G63230.1 | 39.535 | 86 | 51 | 1 | 28 | 112 | 24 | 109 | 7.65e-16 | 68.2 |
Msa0213610 | AT5G55180.1 | 40.000 | 85 | 49 | 1 | 28 | 110 | 370 | 454 | 9.74e-16 | 72.0 |
Msa0213610 | AT3G13560.4 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
Msa0213610 | AT3G13560.1 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
Msa0213610 | AT3G13560.2 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
Msa0213610 | AT3G13560.5 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
Msa0213610 | AT3G13560.3 | 38.889 | 90 | 53 | 1 | 25 | 112 | 357 | 446 | 1.05e-15 | 72.0 |
Msa0213610 | AT3G58100.1 | 30.841 | 107 | 69 | 2 | 8 | 112 | 22 | 125 | 2.75e-15 | 68.2 |
Msa0213610 | AT1G18650.2 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 5.16e-15 | 66.2 |
Msa0213610 | AT1G66250.1 | 34.831 | 89 | 56 | 1 | 27 | 113 | 365 | 453 | 6.84e-15 | 69.7 |
Msa0213610 | AT2G29735.1 | 36.036 | 111 | 68 | 2 | 5 | 112 | 6 | 116 | 9.73e-15 | 65.5 |
Msa0213610 | AT3G58100.2 | 30.841 | 107 | 69 | 2 | 8 | 112 | 98 | 201 | 9.79e-15 | 68.2 |
Msa0213610 | AT1G18650.1 | 33.628 | 113 | 65 | 2 | 1 | 112 | 1 | 104 | 1.29e-14 | 66.6 |
Msa0213610 | AT3G55430.1 | 38.095 | 84 | 51 | 1 | 30 | 112 | 366 | 449 | 1.71e-14 | 68.6 |
Msa0213610 | AT2G01630.3 | 35.106 | 94 | 57 | 2 | 17 | 106 | 345 | 438 | 2.99e-14 | 67.8 |
Msa0213610 | AT2G30933.1 | 34.314 | 102 | 64 | 2 | 13 | 112 | 65 | 165 | 5.70e-14 | 65.5 |
Msa0213610 | AT1G11820.3 | 36.000 | 100 | 60 | 2 | 11 | 106 | 360 | 459 | 1.58e-13 | 65.5 |
Msa0213610 | AT1G29380.3 | 37.931 | 87 | 49 | 3 | 30 | 113 | 148 | 232 | 1.99e-13 | 64.7 |
Msa0213610 | AT2G16230.1 | 34.524 | 84 | 54 | 1 | 30 | 112 | 366 | 449 | 2.11e-13 | 65.5 |
Msa0213610 | AT4G26830.2 | 39.286 | 84 | 49 | 1 | 29 | 110 | 370 | 453 | 2.20e-13 | 65.1 |
Msa0213610 | AT4G26830.1 | 39.286 | 84 | 49 | 1 | 29 | 110 | 366 | 449 | 2.24e-13 | 65.1 |
Msa0213610 | AT5G55180.2 | 39.506 | 81 | 47 | 1 | 28 | 106 | 370 | 450 | 2.39e-13 | 65.1 |
Msa0213610 | AT1G79480.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 311 | 394 | 2.46e-13 | 65.1 |
Msa0213610 | AT1G79480.2 | 36.905 | 84 | 52 | 1 | 30 | 112 | 310 | 393 | 2.63e-13 | 65.1 |
Msa0213610 | AT1G29380.1 | 38.372 | 86 | 48 | 3 | 30 | 112 | 148 | 231 | 2.82e-13 | 64.7 |
Msa0213610 | AT5G67460.1 | 35.556 | 90 | 56 | 1 | 25 | 112 | 288 | 377 | 3.19e-13 | 64.7 |
Msa0213610 | AT5G63250.1 | 36.782 | 87 | 51 | 1 | 30 | 112 | 42 | 128 | 3.95e-13 | 61.6 |
Msa0213610 | AT5G35740.1 | 34.091 | 88 | 55 | 2 | 28 | 112 | 28 | 115 | 6.30e-13 | 60.8 |
Msa0213610 | AT5G64790.1 | 34.483 | 87 | 55 | 2 | 27 | 112 | 366 | 451 | 6.61e-13 | 63.9 |
Msa0213610 | AT4G13600.1 | 36.905 | 84 | 52 | 1 | 30 | 112 | 61 | 144 | 1.19e-12 | 62.0 |
Msa0213610 | AT5G56590.1 | 35.294 | 85 | 53 | 1 | 30 | 112 | 369 | 453 | 1.28e-12 | 63.2 |
Msa0213610 | AT5G24318.2 | 33.735 | 83 | 54 | 1 | 25 | 106 | 367 | 449 | 1.38e-12 | 62.8 |
Msa0213610 | AT2G30933.2 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
Msa0213610 | AT2G30933.3 | 34.375 | 96 | 60 | 2 | 13 | 106 | 65 | 159 | 3.02e-12 | 59.7 |
Msa0213610 | AT4G17180.1 | 38.554 | 83 | 50 | 1 | 30 | 112 | 359 | 440 | 3.98e-12 | 61.6 |
Msa0213610 | AT3G24330.1 | 39.286 | 84 | 49 | 2 | 28 | 110 | 380 | 462 | 7.68e-12 | 60.8 |
Msa0213610 | AT1G29380.4 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
Msa0213610 | AT1G29380.2 | 38.750 | 80 | 44 | 3 | 30 | 106 | 148 | 225 | 9.59e-12 | 59.7 |
Msa0213610 | AT2G42930.1 | 35.106 | 94 | 59 | 2 | 14 | 106 | 24 | 116 | 1.25e-11 | 57.8 |
Msa0213610 | AT5G67460.2 | 35.714 | 84 | 52 | 1 | 25 | 106 | 288 | 371 | 4.60e-11 | 58.5 |
Msa0213610 | AT5G61130.1 | 31.765 | 85 | 57 | 1 | 29 | 112 | 20 | 104 | 9.46e-11 | 56.6 |
Find 38 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTATGCTATTTAATTTAAT+TGG | 0.086739 | 2_1:-56731567 | Msa0213610:three_prime_UTR |
ATCAGTATCTTAACATTAAT+TGG | 0.154882 | 2_1:+56731408 | None:intergenic |
CTCAAAATGGTTCAAAGTTA+AGG | 0.254271 | 2_1:+56731484 | None:intergenic |
GGGAATATGATCATGGTTAA+TGG | 0.289090 | 2_1:-56732321 | Msa0213610:CDS |
TAATTGGTGCAAAATTTAGA+TGG | 0.330321 | 2_1:+56731424 | None:intergenic |
GGTTGTCATTTCAAACCATA+TGG | 0.351784 | 2_1:-56731545 | Msa0213610:three_prime_UTR |
GTATGCTATTTAATTTAATT+GGG | 0.370890 | 2_1:-56731566 | Msa0213610:three_prime_UTR |
ATTTCAAACCATATGGATAT+AGG | 0.376847 | 2_1:-56731538 | Msa0213610:three_prime_UTR |
AGATCGATAATAGAGATTCA+TGG | 0.408516 | 2_1:+56732049 | None:intergenic |
GGAATATGATCATGGTTAAT+GGG | 0.423180 | 2_1:-56732320 | Msa0213610:CDS |
ACTGCATTTATGCATAGAAA+TGG | 0.427694 | 2_1:-56731629 | Msa0213610:exon |
TCAAAATGGTTCAAAGTTAA+GGG | 0.430023 | 2_1:+56731485 | None:intergenic |
TAGTGGTAGATTAGAGTGTG+TGG | 0.462093 | 2_1:+56733165 | None:intergenic |
AATCTCTATTATCGATCTAA+AGG | 0.467046 | 2_1:-56732044 | Msa0213610:CDS |
TATGATCATGGTTAATGGGC+AGG | 0.497346 | 2_1:-56732316 | Msa0213610:intron |
GATCTAAAGGAACGGACCAT+TGG | 0.511484 | 2_1:-56732031 | Msa0213610:CDS |
AGCATATGCCTATATCCATA+TGG | 0.512895 | 2_1:+56731530 | None:intergenic |
AGTGGTAGATTAGAGTGTGT+GGG | 0.523235 | 2_1:+56733166 | None:intergenic |
TGATATATAGAAAGAGATAG+TGG | 0.528900 | 2_1:+56733148 | None:intergenic |
ATTTGAGAGACAAGAAAAGA+AGG | 0.533155 | 2_1:+56733002 | None:intergenic |
AGAGGTAGTTTAGCCATGGT+TGG | 0.534249 | 2_1:+56733034 | None:intergenic |
AGTGTTGCTTGATCTGATGA+AGG | 0.538388 | 2_1:+56732176 | None:intergenic |
CTCTGAAATCGCAGTTCCAA+TGG | 0.540263 | 2_1:+56732015 | None:intergenic |
GAGAAGAGGTAGTTTAGCCA+TGG | 0.544546 | 2_1:+56733030 | None:intergenic |
GATTGCAGAATTCTTCAGAA+AGG | 0.545548 | 2_1:-56732119 | Msa0213610:CDS |
AGAGCAAGCATAATTGAGGT+TGG | 0.555744 | 2_1:+56732148 | None:intergenic |
CATTGGAACTGCGATTTCAG+AGG | 0.562954 | 2_1:-56732014 | Msa0213610:CDS |
TACAGGAGGGAATATGATCA+TGG | 0.563584 | 2_1:-56732328 | Msa0213610:intron |
TTAGTACAAGGCTGCAGACA+AGG | 0.569573 | 2_1:-56733074 | Msa0213610:five_prime_UTR |
ATAATAGAGATTCATGGCGA+TGG | 0.571419 | 2_1:+56732055 | None:intergenic |
AGAGTGTGTGGGAGTGAGTG+TGG | 0.572831 | 2_1:+56733177 | None:intergenic |
CGTGAGAGCAAGCATAATTG+AGG | 0.578215 | 2_1:+56732144 | None:intergenic |
GCAGTACTGCTATTAGTACA+AGG | 0.603907 | 2_1:-56733086 | Msa0213610:five_prime_UTR |
GATTCATGGCGATGGAAGCG+CGG | 0.609487 | 2_1:+56732063 | None:intergenic |
CTATTATCGATCTAAAGGAA+CGG | 0.620629 | 2_1:-56732039 | Msa0213610:CDS |
AGTACTGCTATACTATTCAG+TGG | 0.645630 | 2_1:+56733101 | None:intergenic |
AACACAGAAAACTTGGTGCG+TGG | 0.648923 | 2_1:-56732204 | Msa0213610:intron |
ATAACATCATCAACCAACCA+TGG | 0.661278 | 2_1:-56733047 | Msa0213610:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTAATTT+TGG | + | chr2_1:56731700-56731719 | None:intergenic | 0.0% |
!! | AAAAAAAAAAAAAATTTAAT+TGG | + | chr2_1:56732033-56732052 | None:intergenic | 0.0% |
!!! | ATTAAATTTTTTTTTTTTTT+TGG | - | chr2_1:56732033-56732052 | Msa0213610:CDS | 0.0% |
!!! | TTAAATTTTTTTTTTTTTTT+GGG | - | chr2_1:56732034-56732053 | Msa0213610:CDS | 0.0% |
!!! | TTTTTTTTTTTTTTTAATTT+TGG | + | chr2_1:56731700-56731719 | None:intergenic | 0.0% |
!! | AAAAAAAAAAAAAATTTAAT+TGG | + | chr2_1:56732033-56732052 | None:intergenic | 0.0% |
!!! | ATTAAATTTTTTTTTTTTTT+TGG | - | chr2_1:56732033-56732052 | Msa0213610:CDS | 0.0% |
!!! | TTAAATTTTTTTTTTTTTTT+GGG | - | chr2_1:56732034-56732053 | Msa0213610:CDS | 0.0% |
!! | TATTGAGATAAATTATTATA+AGG | + | chr2_1:56731880-56731899 | None:intergenic | 10.0% |
!!! | GGTAATTTATATTTTTTTTT+AGG | + | chr2_1:56732005-56732024 | None:intergenic | 10.0% |
!! | AAAAAAATTTAATTGGTTAA+TGG | + | chr2_1:56732026-56732045 | None:intergenic | 10.0% |
!! | AAAAACTTTATGTAATTTAT+TGG | + | chr2_1:56732212-56732231 | None:intergenic | 10.0% |
!! | TATTGAGATAAATTATTATA+AGG | + | chr2_1:56731880-56731899 | None:intergenic | 10.0% |
!!! | GGTAATTTATATTTTTTTTT+AGG | + | chr2_1:56732005-56732024 | None:intergenic | 10.0% |
!! | AAAAAAATTTAATTGGTTAA+TGG | + | chr2_1:56732026-56732045 | None:intergenic | 10.0% |
!! | AAAAACTTTATGTAATTTAT+TGG | + | chr2_1:56732212-56732231 | None:intergenic | 10.0% |
!!! | GTTAAATTTGAACATAATTT+TGG | + | chr2_1:56731753-56731772 | None:intergenic | 15.0% |
!! | AAATTATGTTCAAATTTAAC+CGG | - | chr2_1:56731753-56731772 | Msa0213610:intron | 15.0% |
!!! | AAATTACTAACATTTTCTTT+TGG | + | chr2_1:56731854-56731873 | None:intergenic | 15.0% |
!! | TAATTAATATCACTAAACAT+TGG | + | chr2_1:56731930-56731949 | None:intergenic | 15.0% |
!!! | ATATTTTTTTTTAGGGAAAT+TGG | + | chr2_1:56731997-56732016 | None:intergenic | 15.0% |
!!! | AGTATGCTATTTAATTTAAT+TGG | - | chr2_1:56732904-56732923 | Msa0213610:intron | 15.0% |
!!! | GTATGCTATTTAATTTAATT+GGG | - | chr2_1:56732905-56732924 | Msa0213610:intron | 15.0% |
!!! | GTTAAATTTGAACATAATTT+TGG | + | chr2_1:56731753-56731772 | None:intergenic | 15.0% |
!! | AAATTATGTTCAAATTTAAC+CGG | - | chr2_1:56731753-56731772 | Msa0213610:intron | 15.0% |
!!! | AAATTACTAACATTTTCTTT+TGG | + | chr2_1:56731854-56731873 | None:intergenic | 15.0% |
!! | TAATTAATATCACTAAACAT+TGG | + | chr2_1:56731930-56731949 | None:intergenic | 15.0% |
!!! | ATATTTTTTTTTAGGGAAAT+TGG | + | chr2_1:56731997-56732016 | None:intergenic | 15.0% |
!!! | AGTATGCTATTTAATTTAAT+TGG | - | chr2_1:56732904-56732923 | Msa0213610:intron | 15.0% |
!!! | GTATGCTATTTAATTTAATT+GGG | - | chr2_1:56732905-56732924 | Msa0213610:intron | 15.0% |
!! | GCATAATAATACTCATTATA+AGG | + | chr2_1:56731663-56731682 | None:intergenic | 20.0% |
!!! | ATGTAATTTGCAAAGTAATA+TGG | - | chr2_1:56731825-56731844 | Msa0213610:intron | 20.0% |
!!! | AGTATTTTTTTGACTCAAAA+TGG | + | chr2_1:56733003-56733022 | None:intergenic | 20.0% |
!! | ATCAGTATCTTAACATTAAT+TGG | + | chr2_1:56733066-56733085 | None:intergenic | 20.0% |
!! | GCATAATAATACTCATTATA+AGG | + | chr2_1:56731663-56731682 | None:intergenic | 20.0% |
!!! | ATGTAATTTGCAAAGTAATA+TGG | - | chr2_1:56731825-56731844 | Msa0213610:intron | 20.0% |
!!! | AGTATTTTTTTGACTCAAAA+TGG | + | chr2_1:56733003-56733022 | None:intergenic | 20.0% |
!! | ATCAGTATCTTAACATTAAT+TGG | + | chr2_1:56733066-56733085 | None:intergenic | 20.0% |
! | TTTAAAAAGGAAACAATGGT+TGG | + | chr2_1:56731260-56731279 | None:intergenic | 25.0% |
! | TGATATATAGAAAGAGATAG+TGG | + | chr2_1:56731326-56731345 | None:intergenic | 25.0% |
! | GAGACAAACAAATTTAAAGA+AGG | + | chr2_1:56731521-56731540 | None:intergenic | 25.0% |
! | TTTATTACTAGAATCTGCTT+TGG | - | chr2_1:56731624-56731643 | Msa0213610:exon | 25.0% |
!!! | TTTTTAGGGAAATTGGTTAA+TGG | + | chr2_1:56731990-56732009 | None:intergenic | 25.0% |
! | TATGAAAAACACAGAAAACT+TGG | - | chr2_1:56732260-56732279 | Msa0213610:intron | 25.0% |
! | AATCTCTATTATCGATCTAA+AGG | - | chr2_1:56732427-56732446 | Msa0213610:intron | 25.0% |
!!! | CCAATCATAGTTCTAATTTT+CGG | - | chr2_1:56732600-56732619 | Msa0213610:intron | 25.0% |
! | ATTTCAAACCATATGGATAT+AGG | - | chr2_1:56732933-56732952 | Msa0213610:intron | 25.0% |
! | TCAAAATGGTTCAAAGTTAA+GGG | + | chr2_1:56732989-56733008 | None:intergenic | 25.0% |
! | TAATTGGTGCAAAATTTAGA+TGG | + | chr2_1:56733050-56733069 | None:intergenic | 25.0% |
! | TTTAAAAAGGAAACAATGGT+TGG | + | chr2_1:56731260-56731279 | None:intergenic | 25.0% |
! | TGATATATAGAAAGAGATAG+TGG | + | chr2_1:56731326-56731345 | None:intergenic | 25.0% |
! | GAGACAAACAAATTTAAAGA+AGG | + | chr2_1:56731521-56731540 | None:intergenic | 25.0% |
! | TTTATTACTAGAATCTGCTT+TGG | - | chr2_1:56731624-56731643 | Msa0213610:exon | 25.0% |
!!! | TTTTTAGGGAAATTGGTTAA+TGG | + | chr2_1:56731990-56732009 | None:intergenic | 25.0% |
! | TATGAAAAACACAGAAAACT+TGG | - | chr2_1:56732260-56732279 | Msa0213610:intron | 25.0% |
! | AATCTCTATTATCGATCTAA+AGG | - | chr2_1:56732427-56732446 | Msa0213610:intron | 25.0% |
!!! | CCAATCATAGTTCTAATTTT+CGG | - | chr2_1:56732600-56732619 | Msa0213610:intron | 25.0% |
! | ATTTCAAACCATATGGATAT+AGG | - | chr2_1:56732933-56732952 | Msa0213610:intron | 25.0% |
! | TCAAAATGGTTCAAAGTTAA+GGG | + | chr2_1:56732989-56733008 | None:intergenic | 25.0% |
! | TAATTGGTGCAAAATTTAGA+TGG | + | chr2_1:56733050-56733069 | None:intergenic | 25.0% |
AATAAAGAGGGGGTTTAAAA+AGG | + | chr2_1:56731273-56731292 | None:intergenic | 30.0% | |
AAAAGAAGGAAAAAGAGAAG+AGG | + | chr2_1:56731458-56731477 | None:intergenic | 30.0% | |
ATTTGAGAGACAAGAAAAGA+AGG | + | chr2_1:56731472-56731491 | None:intergenic | 30.0% | |
GTAATGTACTACATCTACAT+TGG | - | chr2_1:56731572-56731591 | Msa0213610:three_prime_UTR | 30.0% | |
!!! | CTGGTCTCATTTTGTTTTTT+TGG | - | chr2_1:56731596-56731615 | Msa0213610:three_prime_UTR | 30.0% |
GGAATATGATCATGGTTAAT+GGG | - | chr2_1:56732151-56732170 | Msa0213610:CDS | 30.0% | |
AGATCGATAATAGAGATTCA+TGG | + | chr2_1:56732425-56732444 | None:intergenic | 30.0% | |
CTATTATCGATCTAAAGGAA+CGG | - | chr2_1:56732432-56732451 | Msa0213610:intron | 30.0% | |
AATGAGTTATGTGACTTACT+TGG | + | chr2_1:56732508-56732527 | None:intergenic | 30.0% | |
CCGAAAATTAGAACTATGAT+TGG | + | chr2_1:56732603-56732622 | None:intergenic | 30.0% | |
CAACATTGTAACTGCAATTA+TGG | - | chr2_1:56732651-56732670 | Msa0213610:intron | 30.0% | |
CCATGTGAACATCAATATTA+TGG | + | chr2_1:56732706-56732725 | None:intergenic | 30.0% | |
CCATAATATTGATGTTCACA+TGG | - | chr2_1:56732703-56732722 | Msa0213610:intron | 30.0% | |
!!! | TGGTTGATGGTTTTAAATTG+CGG | + | chr2_1:56732751-56732770 | None:intergenic | 30.0% |
GTCATATCAAACTCGTAAAT+TGG | + | chr2_1:56732771-56732790 | None:intergenic | 30.0% | |
! | TTTTTCTCATTCTGAATTGC+AGG | - | chr2_1:56732811-56732830 | Msa0213610:intron | 30.0% |
ACTGCATTTATGCATAGAAA+TGG | - | chr2_1:56732842-56732861 | Msa0213610:intron | 30.0% | |
CTCAAAATGGTTCAAAGTTA+AGG | + | chr2_1:56732990-56733009 | None:intergenic | 30.0% | |
ACAACTAAAAATGAACGGAT+GGG | + | chr2_1:56733111-56733130 | None:intergenic | 30.0% | |
AGACGACAACTAAAAATGAA+CGG | + | chr2_1:56733116-56733135 | None:intergenic | 30.0% | |
!!! | CATTTTTAGTTGTCGTCTTT+TGG | - | chr2_1:56733118-56733137 | Msa0213610:five_prime_UTR | 30.0% |
AATAAAGAGGGGGTTTAAAA+AGG | + | chr2_1:56731273-56731292 | None:intergenic | 30.0% | |
AAAAGAAGGAAAAAGAGAAG+AGG | + | chr2_1:56731458-56731477 | None:intergenic | 30.0% | |
ATTTGAGAGACAAGAAAAGA+AGG | + | chr2_1:56731472-56731491 | None:intergenic | 30.0% | |
GTAATGTACTACATCTACAT+TGG | - | chr2_1:56731572-56731591 | Msa0213610:three_prime_UTR | 30.0% | |
!!! | CTGGTCTCATTTTGTTTTTT+TGG | - | chr2_1:56731596-56731615 | Msa0213610:three_prime_UTR | 30.0% |
GGAATATGATCATGGTTAAT+GGG | - | chr2_1:56732151-56732170 | Msa0213610:CDS | 30.0% | |
AGATCGATAATAGAGATTCA+TGG | + | chr2_1:56732425-56732444 | None:intergenic | 30.0% | |
CTATTATCGATCTAAAGGAA+CGG | - | chr2_1:56732432-56732451 | Msa0213610:intron | 30.0% | |
AATGAGTTATGTGACTTACT+TGG | + | chr2_1:56732508-56732527 | None:intergenic | 30.0% | |
CCGAAAATTAGAACTATGAT+TGG | + | chr2_1:56732603-56732622 | None:intergenic | 30.0% | |
CAACATTGTAACTGCAATTA+TGG | - | chr2_1:56732651-56732670 | Msa0213610:intron | 30.0% | |
CCATGTGAACATCAATATTA+TGG | + | chr2_1:56732706-56732725 | None:intergenic | 30.0% | |
CCATAATATTGATGTTCACA+TGG | - | chr2_1:56732703-56732722 | Msa0213610:intron | 30.0% | |
!!! | TGGTTGATGGTTTTAAATTG+CGG | + | chr2_1:56732751-56732770 | None:intergenic | 30.0% |
GTCATATCAAACTCGTAAAT+TGG | + | chr2_1:56732771-56732790 | None:intergenic | 30.0% | |
! | TTTTTCTCATTCTGAATTGC+AGG | - | chr2_1:56732811-56732830 | Msa0213610:intron | 30.0% |
ACTGCATTTATGCATAGAAA+TGG | - | chr2_1:56732842-56732861 | Msa0213610:intron | 30.0% | |
CTCAAAATGGTTCAAAGTTA+AGG | + | chr2_1:56732990-56733009 | None:intergenic | 30.0% | |
ACAACTAAAAATGAACGGAT+GGG | + | chr2_1:56733111-56733130 | None:intergenic | 30.0% | |
AGACGACAACTAAAAATGAA+CGG | + | chr2_1:56733116-56733135 | None:intergenic | 30.0% | |
!!! | CATTTTTAGTTGTCGTCTTT+TGG | - | chr2_1:56733118-56733137 | Msa0213610:five_prime_UTR | 30.0% |
GGGGTTTAAAAAGGAAACAA+TGG | + | chr2_1:56731264-56731283 | None:intergenic | 35.0% | |
AGTGAGTGTGGAAATAAAGA+GGG | + | chr2_1:56731285-56731304 | None:intergenic | 35.0% | |
AGTACTGCTATACTATTCAG+TGG | + | chr2_1:56731373-56731392 | None:intergenic | 35.0% | |
ATAACATCATCAACCAACCA+TGG | - | chr2_1:56731424-56731443 | Msa0213610:three_prime_UTR | 35.0% | |
! | CTTTTCTTGTCTCTCAAATC+AGG | - | chr2_1:56731473-56731492 | Msa0213610:three_prime_UTR | 35.0% |
TTGTTTAAGTGATCTGAGTC+CGG | + | chr2_1:56731775-56731794 | None:intergenic | 35.0% | |
GGGAATATGATCATGGTTAA+TGG | - | chr2_1:56732150-56732169 | Msa0213610:CDS | 35.0% | |
GATTGCAGAATTCTTCAGAA+AGG | - | chr2_1:56732352-56732371 | Msa0213610:intron | 35.0% | |
ATAATAGAGATTCATGGCGA+TGG | + | chr2_1:56732419-56732438 | None:intergenic | 35.0% | |
!! | TATGATTGGTTTCGATGTCA+AGG | + | chr2_1:56732589-56732608 | None:intergenic | 35.0% |
CAAACTCGTAAATTGGTTGA+TGG | + | chr2_1:56732764-56732783 | None:intergenic | 35.0% | |
TCATTCTGAATTGCAGGTTA+TGG | - | chr2_1:56732817-56732836 | Msa0213610:intron | 35.0% | |
! | GGTTGTCATTTCAAACCATA+TGG | - | chr2_1:56732926-56732945 | Msa0213610:intron | 35.0% |
AGCATATGCCTATATCCATA+TGG | + | chr2_1:56732944-56732963 | None:intergenic | 35.0% | |
GACAACTAAAAATGAACGGA+TGG | + | chr2_1:56733112-56733131 | None:intergenic | 35.0% | |
GGGGTTTAAAAAGGAAACAA+TGG | + | chr2_1:56731264-56731283 | None:intergenic | 35.0% | |
AGTGAGTGTGGAAATAAAGA+GGG | + | chr2_1:56731285-56731304 | None:intergenic | 35.0% | |
AGTACTGCTATACTATTCAG+TGG | + | chr2_1:56731373-56731392 | None:intergenic | 35.0% | |
ATAACATCATCAACCAACCA+TGG | - | chr2_1:56731424-56731443 | Msa0213610:three_prime_UTR | 35.0% | |
! | CTTTTCTTGTCTCTCAAATC+AGG | - | chr2_1:56731473-56731492 | Msa0213610:three_prime_UTR | 35.0% |
TTGTTTAAGTGATCTGAGTC+CGG | + | chr2_1:56731775-56731794 | None:intergenic | 35.0% | |
GGGAATATGATCATGGTTAA+TGG | - | chr2_1:56732150-56732169 | Msa0213610:CDS | 35.0% | |
GATTGCAGAATTCTTCAGAA+AGG | - | chr2_1:56732352-56732371 | Msa0213610:intron | 35.0% | |
ATAATAGAGATTCATGGCGA+TGG | + | chr2_1:56732419-56732438 | None:intergenic | 35.0% | |
!! | TATGATTGGTTTCGATGTCA+AGG | + | chr2_1:56732589-56732608 | None:intergenic | 35.0% |
CAAACTCGTAAATTGGTTGA+TGG | + | chr2_1:56732764-56732783 | None:intergenic | 35.0% | |
TCATTCTGAATTGCAGGTTA+TGG | - | chr2_1:56732817-56732836 | Msa0213610:intron | 35.0% | |
! | GGTTGTCATTTCAAACCATA+TGG | - | chr2_1:56732926-56732945 | Msa0213610:intron | 35.0% |
AGCATATGCCTATATCCATA+TGG | + | chr2_1:56732944-56732963 | None:intergenic | 35.0% | |
GACAACTAAAAATGAACGGA+TGG | + | chr2_1:56733112-56733131 | None:intergenic | 35.0% | |
TGAGTGTGGAAATAAAGAGG+GGG | + | chr2_1:56731283-56731302 | None:intergenic | 40.0% | |
GTGAGTGTGGAAATAAAGAG+GGG | + | chr2_1:56731284-56731303 | None:intergenic | 40.0% | |
GAGTGAGTGTGGAAATAAAG+AGG | + | chr2_1:56731286-56731305 | None:intergenic | 40.0% | |
AGTGGTAGATTAGAGTGTGT+GGG | + | chr2_1:56731308-56731327 | None:intergenic | 40.0% | |
TAGTGGTAGATTAGAGTGTG+TGG | + | chr2_1:56731309-56731328 | None:intergenic | 40.0% | |
GCAGTACTGCTATTAGTACA+AGG | - | chr2_1:56731385-56731404 | Msa0213610:three_prime_UTR | 40.0% | |
GTACTACATCTACATTGGTC+TGG | - | chr2_1:56731577-56731596 | Msa0213610:three_prime_UTR | 40.0% | |
! | TTCCCTCTTTTGACATGTAC+AGG | - | chr2_1:56732126-56732145 | Msa0213610:CDS | 40.0% |
CTCCTGTACATGTCAAAAGA+GGG | + | chr2_1:56732131-56732150 | None:intergenic | 40.0% | |
! | CTCTTTTGACATGTACAGGA+GGG | - | chr2_1:56732130-56732149 | Msa0213610:CDS | 40.0% |
TACAGGAGGGAATATGATCA+TGG | - | chr2_1:56732143-56732162 | Msa0213610:CDS | 40.0% | |
! | TATGATCATGGTTAATGGGC+AGG | - | chr2_1:56732155-56732174 | Msa0213610:CDS | 40.0% |
!! | AGTGTTGCTTGATCTGATGA+AGG | + | chr2_1:56732298-56732317 | None:intergenic | 40.0% |
AGAGCAAGCATAATTGAGGT+TGG | + | chr2_1:56732326-56732345 | None:intergenic | 40.0% | |
!! | AGATTTTCAGGACTAGAGCA+GGG | + | chr2_1:56732382-56732401 | None:intergenic | 40.0% |
TGTTGCATAGACCGCAATTA+TGG | + | chr2_1:56732633-56732652 | None:intergenic | 40.0% | |
ACAAGCAAATGAAGTCGATG+CGG | + | chr2_1:56732677-56732696 | None:intergenic | 40.0% | |
GTTCACATGGTAACTACAAC+CGG | - | chr2_1:56732716-56732735 | Msa0213610:intron | 40.0% | |
TGAGTGTGGAAATAAAGAGG+GGG | + | chr2_1:56731283-56731302 | None:intergenic | 40.0% | |
GTGAGTGTGGAAATAAAGAG+GGG | + | chr2_1:56731284-56731303 | None:intergenic | 40.0% | |
GAGTGAGTGTGGAAATAAAG+AGG | + | chr2_1:56731286-56731305 | None:intergenic | 40.0% | |
AGTGGTAGATTAGAGTGTGT+GGG | + | chr2_1:56731308-56731327 | None:intergenic | 40.0% | |
TAGTGGTAGATTAGAGTGTG+TGG | + | chr2_1:56731309-56731328 | None:intergenic | 40.0% | |
GCAGTACTGCTATTAGTACA+AGG | - | chr2_1:56731385-56731404 | Msa0213610:three_prime_UTR | 40.0% | |
GTACTACATCTACATTGGTC+TGG | - | chr2_1:56731577-56731596 | Msa0213610:three_prime_UTR | 40.0% | |
! | TTCCCTCTTTTGACATGTAC+AGG | - | chr2_1:56732126-56732145 | Msa0213610:CDS | 40.0% |
CTCCTGTACATGTCAAAAGA+GGG | + | chr2_1:56732131-56732150 | None:intergenic | 40.0% | |
! | CTCTTTTGACATGTACAGGA+GGG | - | chr2_1:56732130-56732149 | Msa0213610:CDS | 40.0% |
TACAGGAGGGAATATGATCA+TGG | - | chr2_1:56732143-56732162 | Msa0213610:CDS | 40.0% | |
! | TATGATCATGGTTAATGGGC+AGG | - | chr2_1:56732155-56732174 | Msa0213610:CDS | 40.0% |
!! | AGTGTTGCTTGATCTGATGA+AGG | + | chr2_1:56732298-56732317 | None:intergenic | 40.0% |
AGAGCAAGCATAATTGAGGT+TGG | + | chr2_1:56732326-56732345 | None:intergenic | 40.0% | |
!! | AGATTTTCAGGACTAGAGCA+GGG | + | chr2_1:56732382-56732401 | None:intergenic | 40.0% |
TGTTGCATAGACCGCAATTA+TGG | + | chr2_1:56732633-56732652 | None:intergenic | 40.0% | |
ACAAGCAAATGAAGTCGATG+CGG | + | chr2_1:56732677-56732696 | None:intergenic | 40.0% | |
GTTCACATGGTAACTACAAC+CGG | - | chr2_1:56732716-56732735 | Msa0213610:intron | 40.0% | |
TTAGTACAAGGCTGCAGACA+AGG | - | chr2_1:56731397-56731416 | Msa0213610:three_prime_UTR | 45.0% | |
AGAGGTAGTTTAGCCATGGT+TGG | + | chr2_1:56731440-56731459 | None:intergenic | 45.0% | |
GAGAAGAGGTAGTTTAGCCA+TGG | + | chr2_1:56731444-56731463 | None:intergenic | 45.0% | |
CCTCCTGTACATGTCAAAAG+AGG | + | chr2_1:56732132-56732151 | None:intergenic | 45.0% | |
! | CCTCTTTTGACATGTACAGG+AGG | - | chr2_1:56732129-56732148 | Msa0213610:CDS | 45.0% |
!! | AACACAGAAAACTTGGTGCG+TGG | - | chr2_1:56732267-56732286 | Msa0213610:intron | 45.0% |
CGTGAGAGCAAGCATAATTG+AGG | + | chr2_1:56732330-56732349 | None:intergenic | 45.0% | |
!! | GATTTTCAGGACTAGAGCAG+GGG | + | chr2_1:56732381-56732400 | None:intergenic | 45.0% |
!! | GAGATTTTCAGGACTAGAGC+AGG | + | chr2_1:56732383-56732402 | None:intergenic | 45.0% |
GATCTAAAGGAACGGACCAT+TGG | - | chr2_1:56732440-56732459 | Msa0213610:intron | 45.0% | |
!! | CTCTGAAATCGCAGTTCCAA+TGG | + | chr2_1:56732459-56732478 | None:intergenic | 45.0% |
CATTGGAACTGCGATTTCAG+AGG | - | chr2_1:56732457-56732476 | Msa0213610:intron | 45.0% | |
TCGGACTGCAACCATAATTG+CGG | - | chr2_1:56732619-56732638 | Msa0213610:intron | 45.0% | |
TAAATTGCGGTTGCAACCAC+CGG | + | chr2_1:56732738-56732757 | None:intergenic | 45.0% | |
TTAGTACAAGGCTGCAGACA+AGG | - | chr2_1:56731397-56731416 | Msa0213610:three_prime_UTR | 45.0% | |
AGAGGTAGTTTAGCCATGGT+TGG | + | chr2_1:56731440-56731459 | None:intergenic | 45.0% | |
GAGAAGAGGTAGTTTAGCCA+TGG | + | chr2_1:56731444-56731463 | None:intergenic | 45.0% | |
CCTCCTGTACATGTCAAAAG+AGG | + | chr2_1:56732132-56732151 | None:intergenic | 45.0% | |
! | CCTCTTTTGACATGTACAGG+AGG | - | chr2_1:56732129-56732148 | Msa0213610:CDS | 45.0% |
!! | AACACAGAAAACTTGGTGCG+TGG | - | chr2_1:56732267-56732286 | Msa0213610:intron | 45.0% |
CGTGAGAGCAAGCATAATTG+AGG | + | chr2_1:56732330-56732349 | None:intergenic | 45.0% | |
!! | GATTTTCAGGACTAGAGCAG+GGG | + | chr2_1:56732381-56732400 | None:intergenic | 45.0% |
!! | GAGATTTTCAGGACTAGAGC+AGG | + | chr2_1:56732383-56732402 | None:intergenic | 45.0% |
GATCTAAAGGAACGGACCAT+TGG | - | chr2_1:56732440-56732459 | Msa0213610:intron | 45.0% | |
!! | CTCTGAAATCGCAGTTCCAA+TGG | + | chr2_1:56732459-56732478 | None:intergenic | 45.0% |
CATTGGAACTGCGATTTCAG+AGG | - | chr2_1:56732457-56732476 | Msa0213610:intron | 45.0% | |
TCGGACTGCAACCATAATTG+CGG | - | chr2_1:56732619-56732638 | Msa0213610:intron | 45.0% | |
TAAATTGCGGTTGCAACCAC+CGG | + | chr2_1:56732738-56732757 | None:intergenic | 45.0% | |
!!! | GTAATTTATATTTTTTTTTA+GGG | + | chr2_1:56732004-56732023 | None:intergenic | 5.0% |
!!! | GTAATTTATATTTTTTTTTA+GGG | + | chr2_1:56732004-56732023 | None:intergenic | 5.0% |
! | GCGCGGTTCATGAGATTTTC+AGG | + | chr2_1:56732394-56732413 | None:intergenic | 50.0% |
CACATGGTAACTACAACCGG+TGG | - | chr2_1:56732719-56732738 | Msa0213610:intron | 50.0% | |
! | GCGCGGTTCATGAGATTTTC+AGG | + | chr2_1:56732394-56732413 | None:intergenic | 50.0% |
CACATGGTAACTACAACCGG+TGG | - | chr2_1:56732719-56732738 | Msa0213610:intron | 50.0% | |
AGAGTGTGTGGGAGTGAGTG+TGG | + | chr2_1:56731297-56731316 | None:intergenic | 55.0% | |
GATTCATGGCGATGGAAGCG+CGG | + | chr2_1:56732411-56732430 | None:intergenic | 55.0% | |
AGAGTGTGTGGGAGTGAGTG+TGG | + | chr2_1:56731297-56731316 | None:intergenic | 55.0% | |
GATTCATGGCGATGGAAGCG+CGG | + | chr2_1:56732411-56732430 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 56731256 | 56733237 | 56731256 | ID=Msa0213610;Name=Msa0213610 |
chr2_1 | mRNA | 56731256 | 56733237 | 56731256 | ID=Msa0213610-mRNA-1;Parent=Msa0213610;Name=Msa0213610-mRNA-1;_AED=0.34;_eAED=0.34;_QI=160|1|1|1|0.75|0.6|5|379|113 |
chr2_1 | exon | 56731256 | 56731660 | 56731256 | ID=Msa0213610-mRNA-1:exon:15807;Parent=Msa0213610-mRNA-1 |
chr2_1 | exon | 56731985 | 56732219 | 56731985 | ID=Msa0213610-mRNA-1:exon:15806;Parent=Msa0213610-mRNA-1 |
chr2_1 | exon | 56732317 | 56732345 | 56732317 | ID=Msa0213610-mRNA-1:exon:15805;Parent=Msa0213610-mRNA-1 |
chr2_1 | exon | 56732999 | 56733199 | 56732999 | ID=Msa0213610-mRNA-1:exon:15804;Parent=Msa0213610-mRNA-1 |
chr2_1 | exon | 56733227 | 56733237 | 56733227 | ID=Msa0213610-mRNA-1:exon:15803;Parent=Msa0213610-mRNA-1 |
chr2_1 | five_prime_UTR | 56733227 | 56733237 | 56733227 | ID=Msa0213610-mRNA-1:five_prime_utr;Parent=Msa0213610-mRNA-1 |
chr2_1 | five_prime_UTR | 56733051 | 56733199 | 56733051 | ID=Msa0213610-mRNA-1:five_prime_utr;Parent=Msa0213610-mRNA-1 |
chr2_1 | CDS | 56732999 | 56733050 | 56732999 | ID=Msa0213610-mRNA-1:cds;Parent=Msa0213610-mRNA-1 |
chr2_1 | CDS | 56732317 | 56732345 | 56732317 | ID=Msa0213610-mRNA-1:cds;Parent=Msa0213610-mRNA-1 |
chr2_1 | CDS | 56731985 | 56732219 | 56731985 | ID=Msa0213610-mRNA-1:cds;Parent=Msa0213610-mRNA-1 |
chr2_1 | CDS | 56731635 | 56731660 | 56731635 | ID=Msa0213610-mRNA-1:cds;Parent=Msa0213610-mRNA-1 |
chr2_1 | three_prime_UTR | 56731256 | 56731634 | 56731256 | ID=Msa0213610-mRNA-1:three_prime_utr;Parent=Msa0213610-mRNA-1 |
Gene Sequence |
Protein sequence |