AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203360


Find 372 sgRNAs with CRISPR-Local

Find 1509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_1 gene 57476270 57497576 57476270 ID=Msa1203360;Name=Msa1203360
chr8_1 mRNA 57476270 57497576 57476270 ID=Msa1203360-mRNA-1;Parent=Msa1203360;Name=Msa1203360-mRNA-1;_AED=0.09;_eAED=0.09;_QI=141|0.89|0.89|1|0.96|0.96|29|343|1693
chr8_1 exon 57476270 57476954 57476270 ID=Msa1203360-mRNA-1:exon:18800;Parent=Msa1203360-mRNA-1
chr8_1 exon 57477402 57477545 57477402 ID=Msa1203360-mRNA-1:exon:18799;Parent=Msa1203360-mRNA-1
chr8_1 exon 57478813 57478896 57478813 ID=Msa1203360-mRNA-1:exon:18798;Parent=Msa1203360-mRNA-1
chr8_1 exon 57479959 57480081 57479959 ID=Msa1203360-mRNA-1:exon:18797;Parent=Msa1203360-mRNA-1
chr8_1 exon 57480210 57480305 57480210 ID=Msa1203360-mRNA-1:exon:18796;Parent=Msa1203360-mRNA-1
chr8_1 exon 57480403 57480485 57480403 ID=Msa1203360-mRNA-1:exon:18795;Parent=Msa1203360-mRNA-1
chr8_1 exon 57481287 57481435 57481287 ID=Msa1203360-mRNA-1:exon:18794;Parent=Msa1203360-mRNA-1
chr8_1 exon 57481506 57481612 57481506 ID=Msa1203360-mRNA-1:exon:18793;Parent=Msa1203360-mRNA-1
chr8_1 exon 57482862 57482984 57482862 ID=Msa1203360-mRNA-1:exon:18792;Parent=Msa1203360-mRNA-1
chr8_1 exon 57483096 57483263 57483096 ID=Msa1203360-mRNA-1:exon:18791;Parent=Msa1203360-mRNA-1
chr8_1 exon 57483392 57483505 57483392 ID=Msa1203360-mRNA-1:exon:18790;Parent=Msa1203360-mRNA-1
chr8_1 exon 57483964 57484283 57483964 ID=Msa1203360-mRNA-1:exon:18789;Parent=Msa1203360-mRNA-1
chr8_1 exon 57488007 57488103 57488007 ID=Msa1203360-mRNA-1:exon:18788;Parent=Msa1203360-mRNA-1
chr8_1 exon 57488189 57488599 57488189 ID=Msa1203360-mRNA-1:exon:18787;Parent=Msa1203360-mRNA-1
chr8_1 exon 57488680 57488941 57488680 ID=Msa1203360-mRNA-1:exon:18786;Parent=Msa1203360-mRNA-1
chr8_1 exon 57489074 57489160 57489074 ID=Msa1203360-mRNA-1:exon:18785;Parent=Msa1203360-mRNA-1
chr8_1 exon 57489246 57489331 57489246 ID=Msa1203360-mRNA-1:exon:18784;Parent=Msa1203360-mRNA-1
chr8_1 exon 57489448 57489684 57489448 ID=Msa1203360-mRNA-1:exon:18783;Parent=Msa1203360-mRNA-1
chr8_1 exon 57490316 57490680 57490316 ID=Msa1203360-mRNA-1:exon:18782;Parent=Msa1203360-mRNA-1
chr8_1 exon 57493055 57493268 57493055 ID=Msa1203360-mRNA-1:exon:18781;Parent=Msa1203360-mRNA-1
chr8_1 exon 57493574 57493629 57493574 ID=Msa1203360-mRNA-1:exon:18780;Parent=Msa1203360-mRNA-1
chr8_1 exon 57494153 57494307 57494153 ID=Msa1203360-mRNA-1:exon:18779;Parent=Msa1203360-mRNA-1
chr8_1 exon 57494698 57494789 57494698 ID=Msa1203360-mRNA-1:exon:18778;Parent=Msa1203360-mRNA-1
chr8_1 exon 57495018 57495134 57495018 ID=Msa1203360-mRNA-1:exon:18777;Parent=Msa1203360-mRNA-1
chr8_1 exon 57495224 57495341 57495224 ID=Msa1203360-mRNA-1:exon:18776;Parent=Msa1203360-mRNA-1
chr8_1 exon 57495439 57496094 57495439 ID=Msa1203360-mRNA-1:exon:18775;Parent=Msa1203360-mRNA-1
chr8_1 exon 57496606 57496730 57496606 ID=Msa1203360-mRNA-1:exon:18774;Parent=Msa1203360-mRNA-1
chr8_1 exon 57496810 57496933 57496810 ID=Msa1203360-mRNA-1:exon:18773;Parent=Msa1203360-mRNA-1
chr8_1 exon 57497409 57497576 57497409 ID=Msa1203360-mRNA-1:exon:18772;Parent=Msa1203360-mRNA-1
chr8_1 five_prime_UTR 57497436 57497576 57497436 ID=Msa1203360-mRNA-1:five_prime_utr;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57497409 57497435 57497409 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57496810 57496933 57496810 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57496606 57496730 57496606 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57495439 57496094 57495439 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57495224 57495341 57495224 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57495018 57495134 57495018 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57494698 57494789 57494698 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57494153 57494307 57494153 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57493574 57493629 57493574 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57493055 57493268 57493055 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57490316 57490680 57490316 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57489448 57489684 57489448 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57489246 57489331 57489246 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57489074 57489160 57489074 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57488680 57488941 57488680 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57488189 57488599 57488189 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57488007 57488103 57488007 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57483964 57484283 57483964 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57483392 57483505 57483392 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57483096 57483263 57483096 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57482862 57482984 57482862 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57481506 57481612 57481506 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57481287 57481435 57481287 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57480403 57480485 57480403 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57480210 57480305 57480210 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57479959 57480081 57479959 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57478813 57478896 57478813 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57477402 57477545 57477402 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 CDS 57476613 57476954 57476613 ID=Msa1203360-mRNA-1:cds;Parent=Msa1203360-mRNA-1
chr8_1 three_prime_UTR 57476270 57476612 57476270 ID=Msa1203360-mRNA-1:three_prime_utr;Parent=Msa1203360-mRNA-1
Gene Sequence

>Msa1203360

ATGACACTTTCTGTATATGAAATCCAGATGATTTTGTTAATGGCCTCCTCATTTTCTGGGGTATCCAGCCACAATACAACAGAGGTATCGGAGAGAAATCATCGGTCTAGTAGCCAAGTTGACAATAGTTTGGAAGCAATCGTTCCTGACGGGGCAATTGTTGCTATTCAGGATGCAAACCAACATATGTATTTTACAGTTGACGGTGAAGAGAATTCCTTCAGTATAGGTGGTGCCATTCATTACTCTCTTGCAGGAGAAAGGGCTCTTTTCAGGGTCAAACACTGCCCCCAAAAAGGATGGAAGTCTACAGTTTTATGGTTTTCCTTGATATCATTGTTTGCTAAGAATGATATGGGTGTACCATTGAGATTGAATTATCGACCAGGATCATGTTTTGTTGACATCTCATGTACTAATGATGGAGGATGCGCACTTTGGAGAGTTTGTCCATCCGAGGCTGAAAGTTATGAAGGAGTATCTGACTCGGAGGCTTTCAATCTAACGAGGAAGAGAACTTTCTACCTTGAGAACAAAATGAATAACTCTGCTATTGCTTTCGTTGATGGTGCTCTGGAGTTTGTCAAGAAGCCTGGGAGTCCAATCAAGTTCAAAGTTTTCAATGATCTTTCTGTTACTTCTGATGTTTCCGAGACTGCTAGCTACCCTAGAATGGCTCTGCAAACACCTTTGCCCACTGATGCAGAAAATACATCTTCGCTTGGTGGAAAACTTCCTTGTATTGATATTAAAATTGAGAAAATTTCCTTGAATATTGTTCACGAGCTTTCTGATACCGAAGATCTCTTCCCTCTCATTAGCTTATTCCTCAACGATACACAACTTACTGTACAGAGATTGGCAACAAAATCTAGGGTCATAAGCACTTCAAGTGCATCAATAAATTATTTTGATGCTCAAAGAAACTTATGGGAAGAACTTCTCCATCCTGTTGAAATTAGCATTTTTTACCGATCTAATGTTCAGGCCCAGATTTCAGAATATGCATCTCATGCAGTGCCTGTTAATTTCTTCTGCAGAATAACAGAGTTGGACATATCACTAAATGAAAATTCGTTGGATGTGCTTCTCTTCATGATTGGGGAATTGAAATTATCCGGTCCTTATTCAATACAAAGCTCTGTGATTCTGGCTAATTTCTGCAAGGTGGAGAATCAGTCAGGGTTGAATCTTCTTTTTCACTTTGATCAGCAACGAGTAACAATTCCCCGAAAACAGTCTGCCTCCATTTTATTAAGGAGGCTCTGTGATTTCAAAATTCAAGATTCAGATGCTGCAATATCTGTTTCTATCCAACTTGCTGATGGCGGTTCCTTTGCAACTTCTCCTATCCGTCTCTTACTTCCACGAACCCAGACTCTTGCTTGGAGAACCCAAATTATGCCAAGAGAAGGTTCAAGAACTTTCCCTGGGCCGATACTCGTGGTTAACATTTCTAGGAATTCAGAGGTTGGTTTGTCATTTGTGGTTTCTCCGTTGATTAGAATACACAATGAAACTGGATTTTCAATGGAACTTCAATTCCAGCGACCTGTTCCATTGGAAGATGAGTTTGCATCTGTCTTGTTAAAACCAGGAGATTCTATAGATGATTCTATGGCTACATTTGATGCAATAAACTTCTCTGGGGGCGTAAAGAGGGCTTTAATGTCTTTAAGTGTTGGTAACTTCTTATTTGCACTTAGACCTAAAATGACCGAGGAATTTAGTAACTCTGAAACTTCTCTTTCACTGGAATGGTCGGATTATATTAAAGGCGGGAAAGCTGTCCGCCTGTCTGGAATATTTGACAAATTGAACTACAGAGTTCGCAAGGCATTATTTGTAAAATCAGTTAAATGTTCCTTTAGCACAGTACATTGCAAACTCATGTCTGAGGGTTTATGTGTTGCCGATATGCATTTTCTCATTCAGACAATTGCTAAAGATGTCCCTGTTGCACAACCCGAAAAGTCTGCTGCTGTGTTAAAAAATGAGAGTTCAAAAGTTTCATTGATAGAGCAGAAAGAAATATATCTTCTTCCTACCGCAACAATATCATGTGGTTCGACAGCTGATTTTTATGCCAATCCAGCGGTTATATACTTCACTGTTACTTTAACTTCTTCTAATTCAAGTTCCAAGCCAGTAAATAGTAGGGATTGCGTGAAAAAGTTACTGAAGCAGAACACTGAAGTCCAACATCTTGATATAAATTTGGACTTTGATGGAGGAAAATTTTCTGCAACCTTGAGATTGTACCGGGGAAACAGGGGCATGCTGGAGGTTGTTGTTTTTACATCGTATTCCGTGAAGAATGAGACAGACCTTCCAGTTTACGTTCTTGCAACTAAAAGATGGCCTCTATCCAGGATTGAATTAGAAAATTTAAAGTCGAACATTCCTTCAGAGCTAGGATTATGTTTGCTTCCAAAGTCAACCAGATCATGGTTCTTGAAATCTGAAAGAGTGCAACTGAGATTACTGGAGGACCATACATCTGAGGCACCGCTAGACTTGGGTTCGTTATCAGGCCTTATAGAAATAAGCTTTAAAAAAGAAGAAGGATCTGGGATTAAATCTGTAACGAAGCTTGGAGTGTCTATTGGTCCTTCTTTAGGAGAGATTGTTGTGCCATCACAGATGGTGACTTTGGTTCCACGATATGTTATTTGTAATAAATCAGAACAAAGTATTACTGTTCGCCAATACTATTTTCAGCTGTCTGTGAAGGATGAGGTGGAAGGTGTTATCTCCATTAACAGCAAACAGAGAATGTCACTGCCACTGAAGGAAGGACTTACCAAGAAAAGAGAGTTCAGTGTATTTGAGCGGTTAATCAGAAAACACAGAATTGACAGTGACAATTCATTGTTATATGTTCAGATTCAAACAAATGAGCCTGGATTGGGATGGTCTGGGCCAGTGTGTCTAGCTTCACTAGGACATTTTTTCCTGAAATTCAGAAAAGAAGGTACAACGTCAGACAACAAAATGACACAATTTGCAGCTGTTCATGTGGCAGAAGAAGCTTCTACTCTTGTTTTGAGTTTCTACAAGCCACCAAATTCAAGTCTGCCTTATCGAATTCAAAATTGTTTGCACAGCTTATCAATAACTTACTATCAAAAGGGTTCATTAGAGCCAGAGGTACTTGGACCTGCAGGAAGCGCTGATTATGTCTGGGATGATTTAACTCTTCCTCATAGACTGGTTGTCCGCATCAATGATAGTCTTCAATTACGAGAGATTAAGTTGGATAAGGTGAGAGCATGGACACCTTTTTATAAACTTGGGCAACAACGAGTTTTGGCCACGCGTTTGCTTTCAGACAAAAGATCAAGAGATCAGAATGCGAGTTTCAGTGAGCGTGATGGCCTTGAGATGACAAAAGTGGGATATGAAATATATGCAGAGGGACCAACCCGAGTTTTGCGAATTTGTGAGATCTCTGATAGTTTCAAGAGAGATACAGTTATTGATTTGTGTGCAAAATTTCAACTGAGAGTTTCTCAGCTTGCAGTTCACATACTTGAACATGTAACACAGGAAGATGAAAATGAGCGCAAAGATTTTACACCAATTGTAGCCGTGAAGTTGGGGAATCTTCACATGATTACTGTTTCTAATAATCATCAGAAATATAACCAGTTCATTATACAGCACATGAACTTGGAGCTTAAGTGGAATGGAGCTCCTTTTGCATCAATGCTTCGCAGACATCAATTGGATTTCAGTGACCCAAATGATTGTGTACTGAAGGTTGTTTTTGTTATACTCACGTCCAGTTCAAATGTGAAGCAATTTAGATACTCATCAATTTTTCTTCAGCCAATTGATTTGAACCTTGATGAGGAAACATTGATGAAACTTGCTTCATTTTGGAGAACATCTCTAAGTGACGCAGAGAGTCAGCGGATTTACTTTGATCATTTTGAAATCTATCCAATAAAGGTGCCTTCCATAAAAAATATGGTTGTAGAACTGAATGGGGTTCTGATAACCCATGCTCTGATTACAATGCGTGAATTATTTATTAAATGTGCACAGCACTATTCATGGTATGCTATGAGAGCCATATATATTGCTAAAGGAAGTCCCTTACTTCCGCCGGATTTTGTTTCTATTTTTGATGACCTGGCTTCATCATCTCTTGATGTCTTCTTTGATCCGTCACATGGGTTGGCAAATCTTCCAGGATTAACTTTAGGTACTTTCAAATTGATAAGTAAATGTATCAAAGGGGAAGGTTTCTCAGGGACAAAACGCTACTTTGGTGATCTAGGGAAAACTTTGAAATCAGCAGGTTCCAATATAGCTTTTGCAGCTGTAGCAGAGATATCAGACTCTATTCTGAGAGGGGCAGAAGCAAATGGTTTTGACGGATTGATGAGTGGATTTCACCAAGGCATTCTAAAATTGGCTATGGAGCCATCAGTTCTGGGAACTGCTTTGATGGAAGGTGGTCCTGATAGAAAGATATTGCTTGATCGAAGTCCAGGGGTTGATGAGCTATACATTGAAGGATATATCCAAGCCATGCTGGATACAGTTTATAGACAAGAATATCTTAGAGTCAGAGTTATTGACAATCAGGTTATCCTGAAGAACCTACCACCAAATCATTCTCTTATCAATGACATCATGGATCGTGTTAAGGAGTTCCTTGTCAGTAAGGCATTACTAAAAGGAGATCCCTCAACTATTTCGAACCCTTTACGCCGTCTTCGTGGAGAAACTGAATGGAGAATAGGACCAACTTTATTGACATTGTGCGAGCATCTTTTTGTTAGCTTTGCAATACGCATGCTGCGAAGGCAGGCTAACAAGTTTGTTTCGAGCATTAAACTGGAAAAGAAGTCATCAGAGGGTGGTGATCATGCAGATGAGCCTGCAAACTCTATTATCCAAAAAGTGCAGAAAGTGAACATCATTCAGAAATGGGGCATCACCAGATTTGTCATGTCTGGTTTGTTGGCATATATTGATGGCCGTTTATGCCGTAGTATTCCCAATCCTGTAGTGCGGAGAGTGGTTAGTGGTTTTATGTTAAGTTATATTGACCAACATGATGAAAAATAA

Protein sequence

>Msa1203360

MTLSVYEIQMILLMASSFSGVSSHNTTEVSERNHRSSSQVDNSLEAIVPDGAIVAIQDANQHMYFTVDGEENSFSIGGAIHYSLAGERALFRVKHCPQKGWKSTVLWFSLISLFAKNDMGVPLRLNYRPGSCFVDISCTNDGGCALWRVCPSEAESYEGVSDSEAFNLTRKRTFYLENKMNNSAIAFVDGALEFVKKPGSPIKFKVFNDLSVTSDVSETASYPRMALQTPLPTDAENTSSLGGKLPCIDIKIEKISLNIVHELSDTEDLFPLISLFLNDTQLTVQRLATKSRVISTSSASINYFDAQRNLWEELLHPVEISIFYRSNVQAQISEYASHAVPVNFFCRITELDISLNENSLDVLLFMIGELKLSGPYSIQSSVILANFCKVENQSGLNLLFHFDQQRVTIPRKQSASILLRRLCDFKIQDSDAAISVSIQLADGGSFATSPIRLLLPRTQTLAWRTQIMPREGSRTFPGPILVVNISRNSEVGLSFVVSPLIRIHNETGFSMELQFQRPVPLEDEFASVLLKPGDSIDDSMATFDAINFSGGVKRALMSLSVGNFLFALRPKMTEEFSNSETSLSLEWSDYIKGGKAVRLSGIFDKLNYRVRKALFVKSVKCSFSTVHCKLMSEGLCVADMHFLIQTIAKDVPVAQPEKSAAVLKNESSKVSLIEQKEIYLLPTATISCGSTADFYANPAVIYFTVTLTSSNSSSKPVNSRDCVKKLLKQNTEVQHLDINLDFDGGKFSATLRLYRGNRGMLEVVVFTSYSVKNETDLPVYVLATKRWPLSRIELENLKSNIPSELGLCLLPKSTRSWFLKSERVQLRLLEDHTSEAPLDLGSLSGLIEISFKKEEGSGIKSVTKLGVSIGPSLGEIVVPSQMVTLVPRYVICNKSEQSITVRQYYFQLSVKDEVEGVISINSKQRMSLPLKEGLTKKREFSVFERLIRKHRIDSDNSLLYVQIQTNEPGLGWSGPVCLASLGHFFLKFRKEGTTSDNKMTQFAAVHVAEEASTLVLSFYKPPNSSLPYRIQNCLHSLSITYYQKGSLEPEVLGPAGSADYVWDDLTLPHRLVVRINDSLQLREIKLDKVRAWTPFYKLGQQRVLATRLLSDKRSRDQNASFSERDGLEMTKVGYEIYAEGPTRVLRICEISDSFKRDTVIDLCAKFQLRVSQLAVHILEHVTQEDENERKDFTPIVAVKLGNLHMITVSNNHQKYNQFIIQHMNLELKWNGAPFASMLRRHQLDFSDPNDCVLKVVFVILTSSSNVKQFRYSSIFLQPIDLNLDEETLMKLASFWRTSLSDAESQRIYFDHFEIYPIKVPSIKNMVVELNGVLITHALITMRELFIKCAQHYSWYAMRAIYIAKGSPLLPPDFVSIFDDLASSSLDVFFDPSHGLANLPGLTLGTFKLISKCIKGEGFSGTKRYFGDLGKTLKSAGSNIAFAAVAEISDSILRGAEANGFDGLMSGFHQGILKLAMEPSVLGTALMEGGPDRKILLDRSPGVDELYIEGYIQAMLDTVYRQEYLRVRVIDNQVILKNLPPNHSLINDIMDRVKEFLVSKALLKGDPSTISNPLRRLRGETEWRIGPTLLTLCEHLFVSFAIRMLRRQANKFVSSIKLEKKSSEGGDHADEPANSIIQKVQKVNIIQKWGITRFVMSGLLAYIDGRLCRSIPNPVVRRVVSGFMLSYIDQHDEK*