Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225660 | XP_013462551.1 | 99.225 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225660 | sp|Q96452|1433C_SOYBN | 83.462 | 260 | 38 | 4 | 1 | 257 | 1 | 258 | 4.21e-154 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225660 | I3T8Q5 | 99.225 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0103240 | Msa1225660 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa0659030 | Msa1225660 | 0.811054 | 8.482313e-51 | -8.615850e-47 |
| Msa0666230 | Msa1225660 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0683780 | Msa1225660 | 0.835433 | 1.682830e-56 | -8.615850e-47 |
| Msa0704660 | Msa1225660 | 0.802283 | 6.038319e-49 | -8.615850e-47 |
| Msa0705000 | Msa1225660 | 0.808701 | 2.721294e-50 | -8.615850e-47 |
| Msa0705040 | Msa1225660 | 0.815393 | 9.462147e-52 | -8.615850e-47 |
| Msa0709780 | Msa1225660 | 0.821437 | 4.040308e-53 | -8.615850e-47 |
| Msa0780930 | Msa1225660 | 0.817627 | 2.989772e-52 | -8.615850e-47 |
| Msa0785130 | Msa1225660 | 0.807833 | 4.166178e-50 | -8.615850e-47 |
| Msa0808800 | Msa1225660 | 0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa0192480 | Msa1225660 | 0.817661 | 2.937445e-52 | -8.615850e-47 |
| Msa0223230 | Msa1225660 | 0.807146 | 5.829669e-50 | -8.615850e-47 |
| Msa1225660 | Msa1227690 | 0.817370 | 3.416049e-52 | -8.615850e-47 |
| Msa1225660 | Msa1321680 | 0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa1225660 | Msa1329540 | 0.814084 | 1.844564e-51 | -8.615850e-47 |
| Msa1225660 | Msa1333560 | 0.813099 | 3.038265e-51 | -8.615850e-47 |
| Msa1225660 | Msa1413180 | 0.985296 | 3.977015e-163 | -8.615850e-47 |
| Msa1225660 | Msa1428810 | 0.833272 | 5.866696e-56 | -8.615850e-47 |
| Msa1225660 | Msa1429500 | 0.985104 | 1.531450e-162 | -8.615850e-47 |
| Msa1225660 | Msa1457400 | 0.809478 | 1.854970e-50 | -8.615850e-47 |
| Msa0423750 | Msa1225660 | 0.820304 | 7.360166e-53 | -8.615850e-47 |
| Msa1040580 | Msa1225660 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0313880 | Msa1225660 | 0.843831 | 1.099958e-58 | -8.615850e-47 |
| Msa1131560 | Msa1225660 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
| Msa1143650 | Msa1225660 | 0.804939 | 1.697808e-49 | -8.615850e-47 |
| Msa1145240 | Msa1225660 | 0.844641 | 6.666610e-59 | -8.615850e-47 |
| Msa1169040 | Msa1225660 | 0.807002 | 6.251425e-50 | -8.615850e-47 |
| Msa1206090 | Msa1225660 | 0.808254 | 3.389950e-50 | -8.615850e-47 |
| Msa0534750 | Msa1225660 | 0.808651 | 2.789583e-50 | -8.615850e-47 |
| Msa0966270 | Msa1225660 | 0.807626 | 4.612033e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225660 | MtrunA17_Chr2g0283791 | 99.225 | 258 | 2 | 0 | 1 | 258 | 1 | 258 | 0.0 | 527 |
| Msa1225660 | MtrunA17_Chr2g0325591 | 81.102 | 254 | 47 | 1 | 6 | 258 | 8 | 261 | 4.40e-156 | 434 |
| Msa1225660 | MtrunA17_Chr8g0379011 | 85.124 | 242 | 33 | 2 | 1 | 239 | 1 | 242 | 2.25e-153 | 427 |
| Msa1225660 | MtrunA17_Chr2g0316011 | 78.689 | 244 | 50 | 2 | 6 | 248 | 9 | 251 | 1.10e-144 | 405 |
| Msa1225660 | MtrunA17_Chr5g0418971 | 76.596 | 235 | 54 | 1 | 9 | 242 | 11 | 245 | 1.64e-135 | 382 |
| Msa1225660 | MtrunA17_Chr5g0426551 | 69.412 | 255 | 71 | 3 | 3 | 254 | 6 | 256 | 1.88e-126 | 359 |
| Msa1225660 | MtrunA17_Chr3g0132301 | 69.841 | 252 | 72 | 3 | 3 | 251 | 6 | 256 | 2.30e-124 | 354 |
| Msa1225660 | MtrunA17_Chr4g0043141 | 70.763 | 236 | 49 | 2 | 24 | 239 | 1 | 236 | 1.72e-120 | 343 |
| Msa1225660 | MtrunA17_Chr3g0133161 | 64.979 | 237 | 79 | 2 | 6 | 238 | 12 | 248 | 2.00e-109 | 316 |
| Msa1225660 | MtrunA17_Chr1g0164601 | 53.219 | 233 | 102 | 4 | 6 | 234 | 12 | 241 | 5.55e-74 | 226 |
| Msa1225660 | MtrunA17_Chr3g0082111 | 52.361 | 233 | 104 | 4 | 6 | 234 | 42 | 271 | 2.21e-71 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1225660 | AT2G42590.2 | 78.261 | 253 | 53 | 2 | 8 | 258 | 10 | 262 | 4.74e-146 | 409 |
| Msa1225660 | AT2G42590.3 | 77.559 | 254 | 54 | 2 | 8 | 258 | 10 | 263 | 1.29e-145 | 409 |
| Msa1225660 | AT2G42590.1 | 77.559 | 254 | 54 | 2 | 8 | 258 | 10 | 263 | 1.47e-145 | 408 |
| Msa1225660 | AT1G26480.1 | 73.256 | 258 | 62 | 2 | 6 | 256 | 11 | 268 | 1.28e-140 | 395 |
| Msa1225660 | AT1G34760.2 | 76.891 | 238 | 53 | 2 | 9 | 245 | 9 | 245 | 4.26e-133 | 376 |
| Msa1225660 | AT1G34760.1 | 76.891 | 238 | 53 | 2 | 9 | 245 | 9 | 245 | 5.46e-133 | 376 |
| Msa1225660 | AT1G22300.2 | 76.829 | 246 | 56 | 1 | 1 | 245 | 1 | 246 | 5.43e-132 | 373 |
| Msa1225660 | AT1G22300.1 | 76.829 | 246 | 56 | 1 | 1 | 245 | 1 | 246 | 6.20e-132 | 373 |
| Msa1225660 | AT1G22300.3 | 80.172 | 232 | 45 | 1 | 9 | 239 | 9 | 240 | 6.34e-131 | 370 |
| Msa1225660 | AT1G78300.1 | 68.504 | 254 | 77 | 2 | 1 | 251 | 1 | 254 | 2.46e-124 | 354 |
| Msa1225660 | AT1G35160.1 | 68.077 | 260 | 79 | 3 | 2 | 258 | 8 | 266 | 2.44e-123 | 352 |
| Msa1225660 | AT3G02520.1 | 67.939 | 262 | 80 | 3 | 1 | 258 | 1 | 262 | 1.12e-122 | 350 |
| Msa1225660 | AT3G02520.2 | 67.939 | 262 | 80 | 3 | 1 | 258 | 1 | 262 | 1.12e-122 | 350 |
| Msa1225660 | AT4G09000.1 | 68.254 | 252 | 72 | 3 | 1 | 244 | 1 | 252 | 3.26e-122 | 349 |
| Msa1225660 | AT5G38480.1 | 71.200 | 250 | 68 | 4 | 1 | 247 | 1 | 249 | 4.05e-122 | 348 |
| Msa1225660 | AT5G38480.3 | 71.371 | 248 | 67 | 4 | 1 | 245 | 1 | 247 | 1.72e-121 | 347 |
| Msa1225660 | AT5G38480.2 | 71.371 | 248 | 67 | 4 | 1 | 245 | 1 | 247 | 1.72e-121 | 347 |
| Msa1225660 | AT4G09000.2 | 70.370 | 243 | 64 | 3 | 1 | 235 | 1 | 243 | 1.91e-120 | 347 |
| Msa1225660 | AT1G35160.2 | 70.886 | 237 | 66 | 2 | 2 | 235 | 8 | 244 | 3.62e-120 | 345 |
| Msa1225660 | AT5G65430.1 | 67.373 | 236 | 73 | 2 | 7 | 238 | 9 | 244 | 4.81e-114 | 328 |
| Msa1225660 | AT5G10450.1 | 67.373 | 236 | 73 | 2 | 7 | 238 | 9 | 244 | 5.36e-114 | 327 |
| Msa1225660 | AT5G65430.2 | 67.811 | 233 | 71 | 2 | 7 | 235 | 9 | 241 | 2.98e-113 | 325 |
| Msa1225660 | AT5G10450.2 | 67.811 | 233 | 71 | 2 | 7 | 235 | 9 | 241 | 4.09e-113 | 325 |
| Msa1225660 | AT5G65430.3 | 67.811 | 233 | 71 | 2 | 7 | 235 | 9 | 241 | 9.83e-113 | 325 |
| Msa1225660 | AT5G10450.3 | 67.811 | 233 | 71 | 2 | 7 | 235 | 9 | 241 | 1.19e-112 | 324 |
| Msa1225660 | AT5G10450.4 | 67.811 | 233 | 71 | 2 | 7 | 235 | 9 | 241 | 1.87e-112 | 325 |
| Msa1225660 | AT5G16050.1 | 63.813 | 257 | 81 | 3 | 9 | 253 | 11 | 267 | 1.08e-111 | 322 |
| Msa1225660 | AT5G16050.2 | 63.813 | 257 | 81 | 3 | 9 | 253 | 11 | 267 | 1.08e-111 | 322 |
| Msa1225660 | AT1G78220.1 | 49.362 | 235 | 117 | 1 | 1 | 233 | 1 | 235 | 1.28e-76 | 233 |
| Msa1225660 | AT1G22290.1 | 48.598 | 214 | 85 | 6 | 1 | 208 | 1 | 195 | 1.35e-52 | 169 |
| Msa1225660 | AT1G22290.2 | 48.387 | 217 | 87 | 6 | 1 | 211 | 1 | 198 | 2.53e-52 | 169 |
| Msa1225660 | AT2G10450.1 | 60.465 | 43 | 17 | 0 | 202 | 244 | 17 | 59 | 7.69e-11 | 57.4 |
Find 94 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATAAGCGATTAAATAAA+AGG | 0.167615 | 8_1:-91119958 | None:intergenic |
| AGACTCTGTTGGTCAATTTC+AGG | 0.210851 | 8_1:-91119846 | None:intergenic |
| GATTGAATTGAATTTGAAAA+AGG | 0.215402 | 8_1:-91120073 | None:intergenic |
| TTGAAAATGCGGAACGGTTT+TGG | 0.239836 | 8_1:-91120188 | None:intergenic |
| CATCTTATTCCGAATTCTTC+TGG | 0.256329 | 8_1:+91120624 | Msa1225660:CDS |
| GATGACTGTAATAATTTAAT+TGG | 0.256916 | 8_1:+91123790 | Msa1225660:three_prime_UTR |
| TTTGCAATTTCTCTGCATTC+AGG | 0.259034 | 8_1:+91119884 | Msa1225660:five_prime_UTR |
| TTGGAGCACGTAGGGCTTCT+TGG | 0.262919 | 8_1:+91120463 | Msa1225660:CDS |
| GAGTATTTCTTTCCTATTCA+TGG | 0.280824 | 8_1:+91119916 | Msa1225660:five_prime_UTR |
| TAATATTAGATATACCTTTC+AGG | 0.295110 | 8_1:-91121659 | None:intergenic |
| TTCGGCTTGTTCAGCGAGTT+TGG | 0.337013 | 8_1:-91120261 | None:intergenic |
| AGGCGATTATTATCGTTATC+TGG | 0.341220 | 8_1:+91120787 | Msa1225660:CDS |
| TAACGCAACATTGGAATTGC+TGG | 0.345151 | 8_1:-91123730 | None:intergenic |
| GAAACTCAATGTTGAATTAA+CGG | 0.348481 | 8_1:+91120398 | Msa1225660:CDS |
| TCAATCTTTGAAAGCGTATC+AGG | 0.360445 | 8_1:+91120850 | Msa1225660:CDS |
| GTTGCTTACAAGAATGTTGT+TGG | 0.372901 | 8_1:+91120444 | Msa1225660:CDS |
| TGGCGGTGTAGACGAAGTTT+TGG | 0.385645 | 8_1:-91120241 | None:intergenic |
| AGTCACTTTAGTCCATGAAT+AGG | 0.389302 | 8_1:-91119928 | None:intergenic |
| AAATAAGCGATTAAATAAAA+GGG | 0.395068 | 8_1:-91119957 | None:intergenic |
| ACTAGTCTCTATGCAAGTTC+TGG | 0.395577 | 8_1:+91123580 | Msa1225660:three_prime_UTR |
| GGCTTGTCACCTTGCCAAGC+AGG | 0.427559 | 8_1:+91121774 | Msa1225660:CDS |
| TTGCAATTTCTCTGCATTCA+GGG | 0.435934 | 8_1:+91119885 | Msa1225660:five_prime_UTR |
| TTAGATTCACCAGAAGAATT+CGG | 0.439019 | 8_1:-91120633 | None:intergenic |
| GACCAACAGAGTCTACATTC+AGG | 0.440512 | 8_1:+91119855 | Msa1225660:five_prime_UTR |
| ACATCCCATCAGACTGGGTT+TGG | 0.444485 | 8_1:+91121595 | Msa1225660:CDS |
| GACTCTGTTGGTCAATTTCA+GGG | 0.457499 | 8_1:-91119845 | None:intergenic |
| TGTCAGAAGTCCACAATGTC+AGG | 0.458840 | 8_1:-91121885 | None:intergenic |
| CTAGGAAAATTATAAACCCT+GGG | 0.458990 | 8_1:+91123686 | Msa1225660:three_prime_UTR |
| TGCTACATCAAATGCCTGCT+TGG | 0.461423 | 8_1:-91121788 | None:intergenic |
| ATGAAGAAGAAGGGAGAATG+AGG | 0.462657 | 8_1:-91120154 | None:intergenic |
| GATGTTACCTTCGTAGCGTT+CGG | 0.465455 | 8_1:-91120279 | None:intergenic |
| CAAATCTCAACGATCTTCCA+TGG | 0.468609 | 8_1:+91120208 | Msa1225660:exon |
| AATAAGCGATTAAATAAAAG+GGG | 0.470246 | 8_1:-91119956 | None:intergenic |
| ATCTCCTGCAGGAGGAGCTC+GGG | 0.473781 | 8_1:-91123428 | None:intergenic |
| CATTGTCAAATGAAAGCCCC+AGG | 0.479493 | 8_1:-91123703 | None:intergenic |
| TTTGCATGCAGTAAAGTGAC+AGG | 0.485969 | 8_1:+91123524 | Msa1225660:intron |
| CACTGATCATGCAGCTTCTG+AGG | 0.487882 | 8_1:+91121857 | Msa1225660:CDS |
| ACCTCTGCATTATCTCCTGC+AGG | 0.493629 | 8_1:-91123439 | None:intergenic |
| ATCAATATCGACTCAAACAA+AGG | 0.497937 | 8_1:+91120093 | Msa1225660:five_prime_UTR |
| TTTAACAGTCGAGGAACAAA+AGG | 0.499669 | 8_1:+91123396 | Msa1225660:intron |
| CTCAGCCTCTGCAGCAGTGG+AGG | 0.505948 | 8_1:-91121561 | None:intergenic |
| TATCTCCTGCAGGAGGAGCT+CGG | 0.507940 | 8_1:-91123429 | None:intergenic |
| TGATGTAGCAATCGCTGAGT+TGG | 0.508758 | 8_1:+91121801 | Msa1225660:CDS |
| GAATGTTGTTGGAGCACGTA+GGG | 0.515655 | 8_1:+91120455 | Msa1225660:CDS |
| TCTAGGAAAATTATAAACCC+TGG | 0.515873 | 8_1:+91123685 | Msa1225660:three_prime_UTR |
| GGAAGCCTCCACTGCTGCAG+AGG | 0.516556 | 8_1:+91121556 | Msa1225660:intron |
| ACCAACAGAGTCTACATTCA+GGG | 0.519786 | 8_1:+91119856 | Msa1225660:five_prime_UTR |
| TTGAATTAACGGTTGAAGAG+AGG | 0.519994 | 8_1:+91120409 | Msa1225660:CDS |
| TCTGCCCGAGCTCCTCCTGC+AGG | 0.522343 | 8_1:+91123424 | Msa1225660:CDS |
| CAAAGCCAAACCCAGTCTGA+TGG | 0.529750 | 8_1:-91121600 | None:intergenic |
| AGCAGCGAGAAGAAGCGAAA+GGG | 0.529966 | 8_1:+91120505 | Msa1225660:CDS |
| TCCCACACATCCCATCAGAC+TGG | 0.532289 | 8_1:+91121589 | Msa1225660:CDS |
| AAAAGCATCTAACGCAACAT+TGG | 0.535046 | 8_1:-91123739 | None:intergenic |
| AGTCTCTATGCAAGTTCTGG+TGG | 0.543018 | 8_1:+91123583 | Msa1225660:three_prime_UTR |
| GAGCACGTAGGGCTTCTTGG+AGG | 0.551251 | 8_1:+91120466 | Msa1225660:CDS |
| GGAGTGATGTGAATGTCAAT+CGG | 0.556097 | 8_1:+91120526 | Msa1225660:CDS |
| TAACTCAGCCTCTGCAGCAG+TGG | 0.556950 | 8_1:-91121564 | None:intergenic |
| CATCAAATGCCTGCTTGGCA+AGG | 0.559534 | 8_1:-91121783 | None:intergenic |
| TGTGAATGTCAATCGGATCA+AGG | 0.560657 | 8_1:+91120533 | Msa1225660:CDS |
| TGAAGAAGAAGGGAGAATGA+GGG | 0.564163 | 8_1:-91120153 | None:intergenic |
| AAAGCCAAACCCAGTCTGAT+GGG | 0.565776 | 8_1:-91121599 | None:intergenic |
| TGAACAGTAAGTCTGTCTCT+AGG | 0.566393 | 8_1:+91123668 | Msa1225660:three_prime_UTR |
| CCCACACATCCCATCAGACT+GGG | 0.567720 | 8_1:+91121590 | Msa1225660:CDS |
| GTTTGGGTGATGAAGAAGAA+GGG | 0.573430 | 8_1:-91120163 | None:intergenic |
| TCAATCGGATCAAGGAGTAT+CGG | 0.575135 | 8_1:+91120541 | Msa1225660:CDS |
| AAATCTTGAACTCTCCTGAA+AGG | 0.575438 | 8_1:+91121645 | Msa1225660:CDS |
| GGCTTGTTCAGCGAGTTTGG+CGG | 0.577446 | 8_1:-91120258 | None:intergenic |
| ATCGTTGAGATTTGAAAATG+CGG | 0.579565 | 8_1:-91120199 | None:intergenic |
| GAGCGGTGATGAGAGGAAAG+AGG | 0.579801 | 8_1:+91120820 | Msa1225660:CDS |
| AGTTTAAGAGCGGTGATGAG+AGG | 0.596754 | 8_1:+91120813 | Msa1225660:CDS |
| ACTGATCATGCAGCTTCTGA+GGG | 0.597947 | 8_1:+91121858 | Msa1225660:CDS |
| AATGATGAAATCATCTAAGG+TGG | 0.601059 | 8_1:-91123849 | None:intergenic |
| CCCAGTCTGATGGGATGTGT+GGG | 0.603776 | 8_1:-91121590 | None:intergenic |
| ATTCCTACAACTAGAAAACA+TGG | 0.606234 | 8_1:-91123616 | None:intergenic |
| ACCCAGTCTGATGGGATGTG+TGG | 0.607248 | 8_1:-91121591 | None:intergenic |
| ACTTCTGACATTCCTGAGGA+AGG | 0.613131 | 8_1:+91121898 | Msa1225660:CDS |
| TCCCTGAATGTAGACTCTGT+TGG | 0.618734 | 8_1:-91119857 | None:intergenic |
| GAGCAGCGAGAAGAAGCGAA+AGG | 0.628936 | 8_1:+91120504 | Msa1225660:CDS |
| GGTTTGGGTGATGAAGAAGA+AGG | 0.633297 | 8_1:-91120164 | None:intergenic |
| TGAGGGACAACCTGACATTG+TGG | 0.634685 | 8_1:+91121875 | Msa1225660:CDS |
| GTGGACTTCTGACATTCCTG+AGG | 0.637259 | 8_1:+91121894 | Msa1225660:CDS |
| TCTGACATTCCTGAGGAAGG+AGG | 0.638467 | 8_1:+91121901 | Msa1225660:CDS |
| ATTGTCAAATGAAAGCCCCA+GGG | 0.641003 | 8_1:-91123702 | None:intergenic |
| GAACAAGCCGAACGCTACGA+AGG | 0.646756 | 8_1:+91120272 | Msa1225660:CDS |
| TGAGATTTGAAAATGCGGAA+CGG | 0.660786 | 8_1:-91120194 | None:intergenic |
| ATAAGCGATTAAATAAAAGG+GGG | 0.662193 | 8_1:-91119955 | None:intergenic |
| TGAGTTGGATTCTCTCAATG+AGG | 0.669995 | 8_1:+91121816 | Msa1225660:CDS |
| TATCTGGCTGAGTTTAAGAG+CGG | 0.685496 | 8_1:+91120803 | Msa1225660:CDS |
| AGTCTGATGGGATGTGTGGG+AGG | 0.685644 | 8_1:-91121587 | None:intergenic |
| TCTGCATTATCTCCTGCAGG+AGG | 0.689694 | 8_1:-91123436 | None:intergenic |
| TCCTGCAGGAGATAATGCAG+AGG | 0.691697 | 8_1:+91123438 | Msa1225660:CDS |
| GTTCAATTAAAACATCCTAG+TGG | 0.694491 | 8_1:-91123650 | None:intergenic |
| TAGGAAAATTATAAACCCTG+GGG | 0.717526 | 8_1:+91123687 | Msa1225660:three_prime_UTR |
| AGAATGTTGTTGGAGCACGT+AGG | 0.773880 | 8_1:+91120454 | Msa1225660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGCGATTAAATAAAA+GGG | - | chr8_1:91119960-91119979 | None:intergenic | 15.0% |
| !! | TAAATAAGCGATTAAATAAA+AGG | - | chr8_1:91119961-91119980 | None:intergenic | 15.0% |
| !!! | TATCGAAATTGAATTTTATA+AGG | - | chr8_1:91120009-91120028 | None:intergenic | 15.0% |
| !!! | TTATAAAAGGTGTTTTTATT+GGG | + | chr8_1:91121146-91121165 | Msa1225660:intron | 15.0% |
| !!! | TTTTATAGTAAACAATCATT+AGG | - | chr8_1:91121246-91121265 | None:intergenic | 15.0% |
| !!! | ATATAATGACTCAATTTTAA+TGG | - | chr8_1:91122552-91122571 | None:intergenic | 15.0% |
| !! | TAAAATTGAGTCATTATATA+TGG | + | chr8_1:91122553-91122572 | Msa1225660:intron | 15.0% |
| !! | AAAATTGAGTCATTATATAT+GGG | + | chr8_1:91122554-91122573 | Msa1225660:intron | 15.0% |
| !!! | ATATATGGGAAATAAAATTT+TGG | + | chr8_1:91122568-91122587 | Msa1225660:intron | 15.0% |
| !!! | TATATGGGAAATAAAATTTT+GGG | + | chr8_1:91122569-91122588 | Msa1225660:intron | 15.0% |
| !!! | AATATATTTTGGACATATAT+TGG | - | chr8_1:91123065-91123084 | None:intergenic | 15.0% |
| !! | GTCCAAAATATATTAAATAT+CGG | + | chr8_1:91123071-91123090 | Msa1225660:intron | 15.0% |
| !! | AATAAGCGATTAAATAAAAG+GGG | - | chr8_1:91119959-91119978 | None:intergenic | 20.0% |
| !! | GATTGAATTGAATTTGAAAA+AGG | - | chr8_1:91120076-91120095 | None:intergenic | 20.0% |
| !!! | CAAAATGTAGGTTTATTTTT+TGG | + | chr8_1:91120668-91120687 | Msa1225660:intron | 20.0% |
| !! | TATTGCCTAAAACTTATAAA+AGG | + | chr8_1:91121133-91121152 | Msa1225660:intron | 20.0% |
| !!! | AAACACCTTTTATAAGTTTT+AGG | - | chr8_1:91121141-91121160 | None:intergenic | 20.0% |
| !!! | CTTATAAAAGGTGTTTTTAT+TGG | + | chr8_1:91121145-91121164 | Msa1225660:intron | 20.0% |
| !! | TAATATTAGATATACCTTTC+AGG | - | chr8_1:91121662-91121681 | None:intergenic | 20.0% |
| !!! | AATAAAAAACAAAGCATTTC+AGG | - | chr8_1:91121983-91122002 | None:intergenic | 20.0% |
| !! | TGAAGTTATGTAAATTCATA+AGG | - | chr8_1:91122243-91122262 | None:intergenic | 20.0% |
| !! | GTTAAAATTGAGTCATTATA+GGG | + | chr8_1:91122814-91122833 | Msa1225660:intron | 20.0% |
| !! | TTAAAATTGAGTCATTATAG+GGG | + | chr8_1:91122815-91122834 | Msa1225660:intron | 20.0% |
| !! | AAATAATATGCATACGAATT+AGG | - | chr8_1:91123307-91123326 | None:intergenic | 20.0% |
| !! | TGCAAAATATAACTTTGTTA+AGG | - | chr8_1:91123510-91123529 | None:intergenic | 20.0% |
| !! | GATGACTGTAATAATTTAAT+TGG | + | chr8_1:91123790-91123809 | Msa1225660:three_prime_UTR | 20.0% |
| ! | ATAAGCGATTAAATAAAAGG+GGG | - | chr8_1:91119958-91119977 | None:intergenic | 25.0% |
| !!! | TGCTTTGTTTCTTTTAGAAA+TGG | + | chr8_1:91120353-91120372 | Msa1225660:intron | 25.0% |
| ! | GAAACTCAATGTTGAATTAA+CGG | + | chr8_1:91120398-91120417 | Msa1225660:CDS | 25.0% |
| ! | TGTGTTCTATTACAAAATGT+AGG | + | chr8_1:91120656-91120675 | Msa1225660:intron | 25.0% |
| !! | ATTCCATCTAATCTTGTTAT+AGG | + | chr8_1:91121097-91121116 | Msa1225660:intron | 25.0% |
| ! | AAACCTATAACAAGATTAGA+TGG | - | chr8_1:91121103-91121122 | None:intergenic | 25.0% |
| ! | AACTGTTATATACACTTCAT+AGG | + | chr8_1:91121214-91121233 | Msa1225660:intron | 25.0% |
| ! | ACTGTTATATACACTTCATA+GGG | + | chr8_1:91121215-91121234 | Msa1225660:intron | 25.0% |
| ! | AAAAAAATTCTTGAGTGAAC+TGG | - | chr8_1:91121482-91121501 | None:intergenic | 25.0% |
| ! | TCATACATGAAAATAATTGC+AGG | + | chr8_1:91121535-91121554 | Msa1225660:intron | 25.0% |
| !! | TAGAGATTCCAACTAATTTT+TGG | + | chr8_1:91122132-91122151 | Msa1225660:intron | 25.0% |
| ! | TGAATTATGTTCATGTTTCA+TGG | - | chr8_1:91122197-91122216 | None:intergenic | 25.0% |
| !!! | ATTTTTCAACAAAAACTGTC+AGG | - | chr8_1:91122285-91122304 | None:intergenic | 25.0% |
| !!! | TAAAATTTTGGGTTTTTGCA+CGG | + | chr8_1:91122580-91122599 | Msa1225660:intron | 25.0% |
| !!! | TCAATTTTAACGATACTTCT+GGG | - | chr8_1:91122805-91122824 | None:intergenic | 25.0% |
| ! | CGTTAAAATTGAGTCATTAT+AGG | + | chr8_1:91122813-91122832 | Msa1225660:intron | 25.0% |
| !! | GGCCGATATTTAATATATTT+TGG | - | chr8_1:91123076-91123095 | None:intergenic | 25.0% |
| !!! | AGAATCATAAACTTTTGAGT+TGG | - | chr8_1:91123104-91123123 | None:intergenic | 25.0% |
| ! | ATTCAGGAAAATTGATTGAA+GGG | - | chr8_1:91123366-91123385 | None:intergenic | 25.0% |
| ! | AATTCAGGAAAATTGATTGA+AGG | - | chr8_1:91123367-91123386 | None:intergenic | 25.0% |
| !! | TCCATGAATCTTATGTTTTT+CGG | - | chr8_1:91123772-91123791 | None:intergenic | 25.0% |
| GAGTATTTCTTTCCTATTCA+TGG | + | chr8_1:91119916-91119935 | Msa1225660:five_prime_UTR | 30.0% | |
| !! | ATCAATATCGACTCAAACAA+AGG | + | chr8_1:91120093-91120112 | Msa1225660:five_prime_UTR | 30.0% |
| ATCGTTGAGATTTGAAAATG+CGG | - | chr8_1:91120202-91120221 | None:intergenic | 30.0% | |
| GAAAAAAGTTGAATCAGAGT+TGG | + | chr8_1:91120563-91120582 | Msa1225660:CDS | 30.0% | |
| TTAGATTCACCAGAAGAATT+CGG | - | chr8_1:91120636-91120655 | None:intergenic | 30.0% | |
| ! | TTTTGCATTCGAATTCATTG+TGG | + | chr8_1:91121189-91121208 | Msa1225660:intron | 30.0% |
| CTGTTATATACACTTCATAG+GGG | + | chr8_1:91121216-91121235 | Msa1225660:intron | 30.0% | |
| TTCATCTTCAAATCAATCAC+AGG | - | chr8_1:91121274-91121293 | None:intergenic | 30.0% | |
| !! | ATTGATTTGAAGATGAAGTG+AGG | + | chr8_1:91121277-91121296 | Msa1225660:intron | 30.0% |
| !!! | TGATCTATGATTGGTTTTCA+TGG | + | chr8_1:91121370-91121389 | Msa1225660:intron | 30.0% |
| !!! | GATGGTTTTTCAAGTAAAAG+AGG | - | chr8_1:91121401-91121420 | None:intergenic | 30.0% |
| AAAAACCATCATCTTGTCTA+GGG | + | chr8_1:91121411-91121430 | Msa1225660:intron | 30.0% | |
| !!! | ACTCAAGAATTTTTTTGCAC+TGG | + | chr8_1:91121486-91121505 | Msa1225660:intron | 30.0% |
| ATGAACACATAAAAACTGAG+GGG | - | chr8_1:91121711-91121730 | None:intergenic | 30.0% | |
| CATGAACACATAAAAACTGA+GGG | - | chr8_1:91121712-91121731 | None:intergenic | 30.0% | |
| ! | AGTTTTTATGTGTTCATGGT+AGG | + | chr8_1:91121714-91121733 | Msa1225660:intron | 30.0% |
| ! | ACTGTTTTCTTTCGTATTTC+AGG | + | chr8_1:91121752-91121771 | Msa1225660:intron | 30.0% |
| ! | CTGTTTTCTTTCGTATTTCA+GGG | + | chr8_1:91121753-91121772 | Msa1225660:intron | 30.0% |
| TATGCTAATTTGATATGCAG+AGG | + | chr8_1:91121945-91121964 | Msa1225660:intron | 30.0% | |
| ACTAACAACTAACAATCACA+TGG | - | chr8_1:91122084-91122103 | None:intergenic | 30.0% | |
| CTTCTGATCCAAAAATTAGT+TGG | - | chr8_1:91122143-91122162 | None:intergenic | 30.0% | |
| ! | AAAACAAGATCTAGTTCCAT+TGG | - | chr8_1:91122171-91122190 | None:intergenic | 30.0% |
| !! | CTCAATTTTAACGATACTTC+TGG | - | chr8_1:91122806-91122825 | None:intergenic | 30.0% |
| ! | AGTCATTATAGGGGAAATTT+TGG | + | chr8_1:91122824-91122843 | Msa1225660:intron | 30.0% |
| ! | GTCATTATAGGGGAAATTTT+GGG | + | chr8_1:91122825-91122844 | Msa1225660:intron | 30.0% |
| AATAAACCTACTTTCCCTAT+TGG | + | chr8_1:91122860-91122879 | Msa1225660:intron | 30.0% | |
| TATGAATCACAGTTCCAATA+GGG | - | chr8_1:91122877-91122896 | None:intergenic | 30.0% | |
| TTATGAATCACAGTTCCAAT+AGG | - | chr8_1:91122878-91122897 | None:intergenic | 30.0% | |
| AAGTAACAATGGCAAAATTG+AGG | - | chr8_1:91123259-91123278 | None:intergenic | 30.0% | |
| GTTTGAAAGGAAAGTAACAA+TGG | - | chr8_1:91123270-91123289 | None:intergenic | 30.0% | |
| GTTAAAAAGGAAGGAAATTC+AGG | - | chr8_1:91123382-91123401 | None:intergenic | 30.0% | |
| ! | TAAAGTGACAGGTTTTACTA+GGG | + | chr8_1:91123535-91123554 | Msa1225660:exon | 30.0% |
| !!! | TTTCCATGTTTTCTAGTTGT+AGG | + | chr8_1:91123613-91123632 | Msa1225660:three_prime_UTR | 30.0% |
| ATTCCTACAACTAGAAAACA+TGG | - | chr8_1:91123619-91123638 | None:intergenic | 30.0% | |
| GTTCAATTAAAACATCCTAG+TGG | - | chr8_1:91123653-91123672 | None:intergenic | 30.0% | |
| TCTAGGAAAATTATAAACCC+TGG | + | chr8_1:91123685-91123704 | Msa1225660:three_prime_UTR | 30.0% | |
| CTAGGAAAATTATAAACCCT+GGG | + | chr8_1:91123686-91123705 | Msa1225660:three_prime_UTR | 30.0% | |
| TAGGAAAATTATAAACCCTG+GGG | + | chr8_1:91123687-91123706 | Msa1225660:three_prime_UTR | 30.0% | |
| ! | CCATGAATCTTATGTTTTTC+GGG | - | chr8_1:91123771-91123790 | None:intergenic | 30.0% |
| TTTGCAATTTCTCTGCATTC+AGG | + | chr8_1:91119884-91119903 | Msa1225660:five_prime_UTR | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | + | chr8_1:91119885-91119904 | Msa1225660:five_prime_UTR | 35.0% | |
| ! | AGTCACTTTAGTCCATGAAT+AGG | - | chr8_1:91119931-91119950 | None:intergenic | 35.0% |
| TGAGATTTGAAAATGCGGAA+CGG | - | chr8_1:91120197-91120216 | None:intergenic | 35.0% | |
| !!! | TGTAGACGAAGTTTTGGTTA+GGG | - | chr8_1:91120238-91120257 | None:intergenic | 35.0% |
| TTGAATTAACGGTTGAAGAG+AGG | + | chr8_1:91120409-91120428 | Msa1225660:CDS | 35.0% | |
| GTTGCTTACAAGAATGTTGT+TGG | + | chr8_1:91120444-91120463 | Msa1225660:CDS | 35.0% | |
| CATCTTATTCCGAATTCTTC+TGG | + | chr8_1:91120624-91120643 | Msa1225660:CDS | 35.0% | |
| TTCGTGTTTGATTGTGTTGT+AGG | + | chr8_1:91120762-91120781 | Msa1225660:intron | 35.0% | |
| GTTTGATTGTGTTGTAGGAA+AGG | + | chr8_1:91120767-91120786 | Msa1225660:intron | 35.0% | |
| AGGCGATTATTATCGTTATC+TGG | + | chr8_1:91120787-91120806 | Msa1225660:CDS | 35.0% | |
| ! | TCAATCTTTGAAAGCGTATC+AGG | + | chr8_1:91120850-91120869 | Msa1225660:CDS | 35.0% |
| CAGGTATTCTACACAATTGT+CGG | + | chr8_1:91120869-91120888 | Msa1225660:intron | 35.0% | |
| AGGTATTCTACACAATTGTC+GGG | + | chr8_1:91120870-91120889 | Msa1225660:intron | 35.0% | |
| CTTGAAAGCTTAATCATGCT+TGG | + | chr8_1:91120943-91120962 | Msa1225660:intron | 35.0% | |
| ! | TGAAGTGAGGTGTTATATGT+TGG | + | chr8_1:91121290-91121309 | Msa1225660:intron | 35.0% |
| ACCAATCATAGATCAGTCTT+GGG | - | chr8_1:91121365-91121384 | None:intergenic | 35.0% | |
| AACCAATCATAGATCAGTCT+TGG | - | chr8_1:91121366-91121385 | None:intergenic | 35.0% | |
| GAAAAACCATCATCTTGTCT+AGG | + | chr8_1:91121410-91121429 | Msa1225660:intron | 35.0% | |
| AAAACCATCATCTTGTCTAG+GGG | + | chr8_1:91121412-91121431 | Msa1225660:intron | 35.0% | |
| AAATCTTGAACTCTCCTGAA+AGG | + | chr8_1:91121645-91121664 | Msa1225660:CDS | 35.0% | |
| TGAACACATAAAAACTGAGG+GGG | - | chr8_1:91121710-91121729 | None:intergenic | 35.0% | |
| CCATGAACACATAAAAACTG+AGG | - | chr8_1:91121713-91121732 | None:intergenic | 35.0% | |
| ! | CCTCAGTTTTTATGTGTTCA+TGG | + | chr8_1:91121710-91121729 | Msa1225660:intron | 35.0% |
| ! | GATATTTTCCTTAGTCAGAC+AGG | + | chr8_1:91122013-91122032 | Msa1225660:intron | 35.0% |
| AGTTGGAATCTCTATCAAGT+GGG | - | chr8_1:91122126-91122145 | None:intergenic | 35.0% | |
| TAGTTGGAATCTCTATCAAG+TGG | - | chr8_1:91122127-91122146 | None:intergenic | 35.0% | |
| !!! | GAGTTTTTAGAACTACTTGC+AGG | - | chr8_1:91122320-91122339 | None:intergenic | 35.0% |
| TGTGTCTATGTTTCCAATTG+CGG | + | chr8_1:91122353-91122372 | Msa1225660:intron | 35.0% | |
| !! | TCAATTTTAATGGTGCTCCT+GGG | - | chr8_1:91122542-91122561 | None:intergenic | 35.0% |
| GATTCCAATTCAAGACAAGA+AGG | - | chr8_1:91122728-91122747 | None:intergenic | 35.0% | |
| TCTTGTCTTGAATTGGAATC+TGG | + | chr8_1:91122728-91122747 | Msa1225660:intron | 35.0% | |
| TTAGAATGAGGGAAAGTTGA+GGG | - | chr8_1:91122959-91122978 | None:intergenic | 35.0% | |
| ATTAGAATGAGGGAAAGTTG+AGG | - | chr8_1:91122960-91122979 | None:intergenic | 35.0% | |
| TGTCACAGCTATTAGAATGA+GGG | - | chr8_1:91122970-91122989 | None:intergenic | 35.0% | |
| TTGTCACAGCTATTAGAATG+AGG | - | chr8_1:91122971-91122990 | None:intergenic | 35.0% | |
| !!! | TAAACTTTTGAGTTGGTGCT+TGG | - | chr8_1:91123097-91123116 | None:intergenic | 35.0% |
| TCATCATTAACTTCCAGCAT+TGG | + | chr8_1:91123138-91123157 | Msa1225660:intron | 35.0% | |
| CATCATTAACTTCCAGCATT+GGG | + | chr8_1:91123139-91123158 | Msa1225660:intron | 35.0% | |
| TGTCTTTAGTGTTTCCTTTC+TGG | + | chr8_1:91123181-91123200 | Msa1225660:intron | 35.0% | |
| ! | CGAGTTTAAAACAACCAGAA+AGG | - | chr8_1:91123198-91123217 | None:intergenic | 35.0% |
| GAAAATTGATTGAAGGGCAA+AGG | - | chr8_1:91123360-91123379 | None:intergenic | 35.0% | |
| TTGTTCCTCGACTGTTAAAA+AGG | - | chr8_1:91123395-91123414 | None:intergenic | 35.0% | |
| TTTAACAGTCGAGGAACAAA+AGG | + | chr8_1:91123396-91123415 | Msa1225660:intron | 35.0% | |
| ! | GTAAAGTGACAGGTTTTACT+AGG | + | chr8_1:91123534-91123553 | Msa1225660:intron | 35.0% |
| ! | AAAGTGACAGGTTTTACTAG+GGG | + | chr8_1:91123536-91123555 | Msa1225660:exon | 35.0% |
| !!! | GAATTTTAAAGCTCACCACT+AGG | + | chr8_1:91123635-91123654 | Msa1225660:three_prime_UTR | 35.0% |
| !! | AAAAGCATCTAACGCAACAT+TGG | - | chr8_1:91123742-91123761 | None:intergenic | 35.0% |
| CCCGAAAAACATAAGATTCA+TGG | + | chr8_1:91123768-91123787 | Msa1225660:three_prime_UTR | 35.0% | |
| GACTCTGTTGGTCAATTTCA+GGG | - | chr8_1:91119848-91119867 | None:intergenic | 40.0% | |
| AGACTCTGTTGGTCAATTTC+AGG | - | chr8_1:91119849-91119868 | None:intergenic | 40.0% | |
| ACCAACAGAGTCTACATTCA+GGG | + | chr8_1:91119856-91119875 | Msa1225660:five_prime_UTR | 40.0% | |
| TGAAGAAGAAGGGAGAATGA+GGG | - | chr8_1:91120156-91120175 | None:intergenic | 40.0% | |
| ATGAAGAAGAAGGGAGAATG+AGG | - | chr8_1:91120157-91120176 | None:intergenic | 40.0% | |
| GTTTGGGTGATGAAGAAGAA+GGG | - | chr8_1:91120166-91120185 | None:intergenic | 40.0% | |
| ! | TTGAAAATGCGGAACGGTTT+TGG | - | chr8_1:91120191-91120210 | None:intergenic | 40.0% |
| CAAATCTCAACGATCTTCCA+TGG | + | chr8_1:91120208-91120227 | Msa1225660:exon | 40.0% | |
| !!! | GTAGACGAAGTTTTGGTTAG+GGG | - | chr8_1:91120237-91120256 | None:intergenic | 40.0% |
| !!! | GTGTAGACGAAGTTTTGGTT+AGG | - | chr8_1:91120239-91120258 | None:intergenic | 40.0% |
| GGAGTGATGTGAATGTCAAT+CGG | + | chr8_1:91120526-91120545 | Msa1225660:CDS | 40.0% | |
| TGTGAATGTCAATCGGATCA+AGG | + | chr8_1:91120533-91120552 | Msa1225660:CDS | 40.0% | |
| ! | TCAATCGGATCAAGGAGTAT+CGG | + | chr8_1:91120541-91120560 | Msa1225660:CDS | 40.0% |
| ! | TTTTTGCTCGCGCTGAAATT+TGG | + | chr8_1:91120717-91120736 | Msa1225660:intron | 40.0% |
| TATCTGGCTGAGTTTAAGAG+CGG | + | chr8_1:91120803-91120822 | Msa1225660:CDS | 40.0% | |
| GGTATTCTACACAATTGTCG+GGG | + | chr8_1:91120871-91120890 | Msa1225660:intron | 40.0% | |
| ! | TATGTTGGTGCTTAGTCTTC+AGG | + | chr8_1:91121305-91121324 | Msa1225660:intron | 40.0% |
| TCCCAAGACTGATCTATGAT+TGG | + | chr8_1:91121361-91121380 | Msa1225660:intron | 40.0% | |
| GAACACATAAAAACTGAGGG+GGG | - | chr8_1:91121709-91121728 | None:intergenic | 40.0% | |
| TTTATGTGTTCATGGTAGGC+TGG | + | chr8_1:91121718-91121737 | Msa1225660:intron | 40.0% | |
| ! | TGAGTTGGATTCTCTCAATG+AGG | + | chr8_1:91121816-91121835 | Msa1225660:CDS | 40.0% |
| ! | ATTTTCCTTAGTCAGACAGG+AGG | + | chr8_1:91122016-91122035 | Msa1225660:intron | 40.0% |
| TGGATCAGAAGAAGATCCAA+TGG | + | chr8_1:91122152-91122171 | Msa1225660:intron | 40.0% | |
| TTCACAATCCTGTAGAAAGC+AGG | + | chr8_1:91122259-91122278 | Msa1225660:intron | 40.0% | |
| TGTTGTGGTCTAAAAAACCC+AGG | + | chr8_1:91122522-91122541 | Msa1225660:intron | 40.0% | |
| !! | CTCAATTTTAATGGTGCTCC+TGG | - | chr8_1:91122543-91122562 | None:intergenic | 40.0% |
| TCCAATTCAAGACAAGAAGG+CGG | - | chr8_1:91122725-91122744 | None:intergenic | 40.0% | |
| GGTTATCTCAGCCAAAACAT+TGG | - | chr8_1:91122784-91122803 | None:intergenic | 40.0% | |
| ACAGTTCCAATAGGGAAAGT+AGG | - | chr8_1:91122869-91122888 | None:intergenic | 40.0% | |
| !! | CTGATTGATGATGGTTGAGA+AGG | - | chr8_1:91123002-91123021 | None:intergenic | 40.0% |
| TCTCAACCATCATCAATCAG+TGG | + | chr8_1:91123002-91123021 | Msa1225660:intron | 40.0% | |
| ! | TCATCTCTCAATCCCAGTTT+TGG | + | chr8_1:91123026-91123045 | Msa1225660:intron | 40.0% |
| ! | CATCTCTCAATCCCAGTTTT+GGG | + | chr8_1:91123027-91123046 | Msa1225660:intron | 40.0% |
| ! | ATCTCTCAATCCCAGTTTTG+GGG | + | chr8_1:91123028-91123047 | Msa1225660:intron | 40.0% |
| ! | ATACGAATTAGGAAGTGCGA+AGG | - | chr8_1:91123296-91123315 | None:intergenic | 40.0% |
| AATTGATTGAAGGGCAAAGG+CGG | - | chr8_1:91123357-91123376 | None:intergenic | 40.0% | |
| ! | TCCTTCCTTTTTAACAGTCG+AGG | + | chr8_1:91123387-91123406 | Msa1225660:intron | 40.0% |
| TCCTCGACTGTTAAAAAGGA+AGG | - | chr8_1:91123391-91123410 | None:intergenic | 40.0% | |
| TTACCTGAGAGATTGTCTTC+TGG | + | chr8_1:91123473-91123492 | Msa1225660:intron | 40.0% | |
| AAACCAGAAGACAATCTCTC+AGG | - | chr8_1:91123479-91123498 | None:intergenic | 40.0% | |
| TTTGCATGCAGTAAAGTGAC+AGG | + | chr8_1:91123524-91123543 | Msa1225660:intron | 40.0% | |
| ! | ACTAGTCTCTATGCAAGTTC+TGG | + | chr8_1:91123580-91123599 | Msa1225660:three_prime_UTR | 40.0% |
| TGAACAGTAAGTCTGTCTCT+AGG | + | chr8_1:91123668-91123687 | Msa1225660:three_prime_UTR | 40.0% | |
| ATTGTCAAATGAAAGCCCCA+GGG | - | chr8_1:91123705-91123724 | None:intergenic | 40.0% | |
| TAACGCAACATTGGAATTGC+TGG | - | chr8_1:91123733-91123752 | None:intergenic | 40.0% | |
| GACCAACAGAGTCTACATTC+AGG | + | chr8_1:91119855-91119874 | Msa1225660:five_prime_UTR | 45.0% | |
| TCCCTGAATGTAGACTCTGT+TGG | - | chr8_1:91119860-91119879 | None:intergenic | 45.0% | |
| GGTTTGGGTGATGAAGAAGA+AGG | - | chr8_1:91120167-91120186 | None:intergenic | 45.0% | |
| !! | AAAATGCGGAACGGTTTTGG+TGG | - | chr8_1:91120188-91120207 | None:intergenic | 45.0% |
| GATGTTACCTTCGTAGCGTT+CGG | - | chr8_1:91120282-91120301 | None:intergenic | 45.0% | |
| AGAATGTTGTTGGAGCACGT+AGG | + | chr8_1:91120454-91120473 | Msa1225660:CDS | 45.0% | |
| GAATGTTGTTGGAGCACGTA+GGG | + | chr8_1:91120455-91120474 | Msa1225660:CDS | 45.0% | |
| AGTTTAAGAGCGGTGATGAG+AGG | + | chr8_1:91120813-91120832 | Msa1225660:CDS | 45.0% | |
| TCTTCAATAAAGCAGTCCGC+AGG | + | chr8_1:91121029-91121048 | Msa1225660:intron | 45.0% | |
| ACTTCCCCTAGACAAGATGA+TGG | - | chr8_1:91121419-91121438 | None:intergenic | 45.0% | |
| AAAGCCAAACCCAGTCTGAT+GGG | - | chr8_1:91121602-91121621 | None:intergenic | 45.0% | |
| TGCTACATCAAATGCCTGCT+TGG | - | chr8_1:91121791-91121810 | None:intergenic | 45.0% | |
| TGATGTAGCAATCGCTGAGT+TGG | + | chr8_1:91121801-91121820 | Msa1225660:CDS | 45.0% | |
| ACTGATCATGCAGCTTCTGA+GGG | + | chr8_1:91121858-91121877 | Msa1225660:CDS | 45.0% | |
| TGTCAGAAGTCCACAATGTC+AGG | - | chr8_1:91121888-91121907 | None:intergenic | 45.0% | |
| ACTTCTGACATTCCTGAGGA+AGG | + | chr8_1:91121898-91121917 | Msa1225660:CDS | 45.0% | |
| ! | TAGTTTTCACCTCCTTCCTC+AGG | - | chr8_1:91121913-91121932 | None:intergenic | 45.0% |
| GGAATCTCTATCAAGTGGGT+GGG | - | chr8_1:91122122-91122141 | None:intergenic | 45.0% | |
| TGGAATCTCTATCAAGTGGG+TGG | - | chr8_1:91122123-91122142 | None:intergenic | 45.0% | |
| !!! | TGGCATCTGGTTTTGCATCT+TGG | + | chr8_1:91122476-91122495 | Msa1225660:intron | 45.0% |
| !!! | GGCATCTGGTTTTGCATCTT+GGG | + | chr8_1:91122477-91122496 | Msa1225660:intron | 45.0% |
| AGAAGTTGCACAGACAAGAG+GGG | - | chr8_1:91122620-91122639 | None:intergenic | 45.0% | |
| GAGAAGTTGCACAGACAAGA+GGG | - | chr8_1:91122621-91122640 | None:intergenic | 45.0% | |
| AGAGAAGTTGCACAGACAAG+AGG | - | chr8_1:91122622-91122641 | None:intergenic | 45.0% | |
| TTGTCAATAGTGCCGCATTG+CGG | + | chr8_1:91122641-91122660 | Msa1225660:intron | 45.0% | |
| !!! | TGGAATCTGGTTTTGCGTCT+TGG | + | chr8_1:91122741-91122760 | Msa1225660:intron | 45.0% |
| !!! | GGAATCTGGTTTTGCGTCTT+GGG | + | chr8_1:91122742-91122761 | Msa1225660:intron | 45.0% |
| ! | GGAAAAGATGGTGGCAGTTT+GGG | - | chr8_1:91122912-91122931 | None:intergenic | 45.0% |
| ! | TGGAAAAGATGGTGGCAGTT+TGG | - | chr8_1:91122913-91122932 | None:intergenic | 45.0% |
| GTACAATAAACCACTGCTGC+TGG | - | chr8_1:91122933-91122952 | None:intergenic | 45.0% | |
| AATGAGGGAAAGTTGAGGGT+TGG | - | chr8_1:91122955-91122974 | None:intergenic | 45.0% | |
| ! | GATGAGCCACTGATTGATGA+TGG | - | chr8_1:91123011-91123030 | None:intergenic | 45.0% |
| CGATGTTAGACCCCAAAACT+GGG | - | chr8_1:91123041-91123060 | None:intergenic | 45.0% | |
| !!! | CCAGTTTTGGGGTCTAACAT+CGG | + | chr8_1:91123039-91123058 | Msa1225660:intron | 45.0% |
| ATACCACTAAGACCCAATGC+TGG | - | chr8_1:91123154-91123173 | None:intergenic | 45.0% | |
| AGTGCGAAGGCAAGTTTGAA+AGG | - | chr8_1:91123283-91123302 | None:intergenic | 45.0% | |
| ! | CAGGTTTTACTAGGGGTTTG+TGG | + | chr8_1:91123543-91123562 | Msa1225660:three_prime_UTR | 45.0% |
| ! | AGTCTCTATGCAAGTTCTGG+TGG | + | chr8_1:91123583-91123602 | Msa1225660:three_prime_UTR | 45.0% |
| CATTGTCAAATGAAAGCCCC+AGG | - | chr8_1:91123706-91123725 | None:intergenic | 45.0% | |
| !! | CGGAACGGTTTTGGTGGTTT+GGG | - | chr8_1:91120182-91120201 | None:intergenic | 50.0% |
| !!! | GTTTTGGTTAGGGGAAGCCA+TGG | - | chr8_1:91120228-91120247 | None:intergenic | 50.0% |
| ! | TGGCGGTGTAGACGAAGTTT+TGG | - | chr8_1:91120244-91120263 | None:intergenic | 50.0% |
| ! | TTCGGCTTGTTCAGCGAGTT+TGG | - | chr8_1:91120264-91120283 | None:intergenic | 50.0% |
| AGCAGCGAGAAGAAGCGAAA+GGG | + | chr8_1:91120505-91120524 | Msa1225660:CDS | 50.0% | |
| ATAAAGCAGTCCGCAGGACT+TGG | + | chr8_1:91121035-91121054 | Msa1225660:intron | 50.0% | |
| ! | TGGTGCTTAGTCTTCAGGCA+TGG | + | chr8_1:91121310-91121329 | Msa1225660:intron | 50.0% |
| ACATCCCATCAGACTGGGTT+TGG | + | chr8_1:91121595-91121614 | Msa1225660:CDS | 50.0% | |
| CAAAGCCAAACCCAGTCTGA+TGG | - | chr8_1:91121603-91121622 | None:intergenic | 50.0% | |
| CATCAAATGCCTGCTTGGCA+AGG | - | chr8_1:91121786-91121805 | None:intergenic | 50.0% | |
| CACTGATCATGCAGCTTCTG+AGG | + | chr8_1:91121857-91121876 | Msa1225660:CDS | 50.0% | |
| TGAGGGACAACCTGACATTG+TGG | + | chr8_1:91121875-91121894 | Msa1225660:CDS | 50.0% | |
| GTGGACTTCTGACATTCCTG+AGG | + | chr8_1:91121894-91121913 | Msa1225660:CDS | 50.0% | |
| TCTGACATTCCTGAGGAAGG+AGG | + | chr8_1:91121901-91121920 | Msa1225660:CDS | 50.0% | |
| CACATCCTCCTGTCTGACTA+AGG | - | chr8_1:91122024-91122043 | None:intergenic | 50.0% | |
| TCTCTATCAAGTGGGTGGGA+GGG | - | chr8_1:91122118-91122137 | None:intergenic | 50.0% | |
| ATCTCTATCAAGTGGGTGGG+AGG | - | chr8_1:91122119-91122138 | None:intergenic | 50.0% | |
| ATTACCGTGGCGTGAAACAG+TGG | + | chr8_1:91122379-91122398 | Msa1225660:intron | 50.0% | |
| ATGTGTCGTGTGGTCCAGAA+TGG | + | chr8_1:91122417-91122436 | Msa1225660:intron | 50.0% | |
| CAACAGACGCAACTCCATTC+TGG | - | chr8_1:91122434-91122453 | None:intergenic | 50.0% | |
| GATGCCAAGACAAGACACGA+AGG | - | chr8_1:91122463-91122482 | None:intergenic | 50.0% | |
| TCGTGTCTTGTCTTGGCATC+TGG | + | chr8_1:91122463-91122482 | Msa1225660:intron | 50.0% | |
| !! | ATAGGAGCGTCACAGTGTTG+TGG | + | chr8_1:91122507-91122526 | Msa1225660:intron | 50.0% |
| GCACAGACAAGAGGGGAAAT+AGG | - | chr8_1:91122613-91122632 | None:intergenic | 50.0% | |
| TGTCAATAGTGCCGCATTGC+GGG | + | chr8_1:91122642-91122661 | Msa1225660:intron | 50.0% | |
| GCCGCCTTCTTGTCTTGAAT+TGG | + | chr8_1:91122721-91122740 | Msa1225660:intron | 50.0% | |
| !!! | GGATAGGAGCGCCAATGTTT+TGG | + | chr8_1:91122770-91122789 | Msa1225660:intron | 50.0% |
| ! | AAGATGGTGGCAGTTTGGGA+CGG | - | chr8_1:91122908-91122927 | None:intergenic | 50.0% |
| ACTGCTGCTGGAAAAGATGG+TGG | - | chr8_1:91122921-91122940 | None:intergenic | 50.0% | |
| ! | ACCATCTTTTCCAGCAGCAG+TGG | + | chr8_1:91122920-91122939 | Msa1225660:intron | 50.0% |
| ACCACTGCTGCTGGAAAAGA+TGG | - | chr8_1:91122924-91122943 | None:intergenic | 50.0% | |
| ! | GATGATGGTTGAGAAGGAGC+AGG | - | chr8_1:91122996-91123015 | None:intergenic | 50.0% |
| CCGATGTTAGACCCCAAAAC+TGG | - | chr8_1:91123042-91123061 | None:intergenic | 50.0% | |
| ! | CTTCCAGCATTGGGTCTTAG+TGG | + | chr8_1:91123148-91123167 | Msa1225660:intron | 50.0% |
| TCTGCATTATCTCCTGCAGG+AGG | - | chr8_1:91123439-91123458 | None:intergenic | 50.0% | |
| TCCTGCAGGAGATAATGCAG+AGG | + | chr8_1:91123438-91123457 | Msa1225660:CDS | 50.0% | |
| ACCTCTGCATTATCTCCTGC+AGG | - | chr8_1:91123442-91123461 | None:intergenic | 50.0% | |
| !! | GCGGAACGGTTTTGGTGGTT+TGG | - | chr8_1:91120183-91120202 | None:intergenic | 55.0% |
| ! | GGCTTGTTCAGCGAGTTTGG+CGG | - | chr8_1:91120261-91120280 | None:intergenic | 55.0% |
| GAACAAGCCGAACGCTACGA+AGG | + | chr8_1:91120272-91120291 | Msa1225660:CDS | 55.0% | |
| TTGGAGCACGTAGGGCTTCT+TGG | + | chr8_1:91120463-91120482 | Msa1225660:CDS | 55.0% | |
| GAGCAGCGAGAAGAAGCGAA+AGG | + | chr8_1:91120504-91120523 | Msa1225660:CDS | 55.0% | |
| GAGCGGTGATGAGAGGAAAG+AGG | + | chr8_1:91120820-91120839 | Msa1225660:CDS | 55.0% | |
| !! | GTCCGCAGGACTTGGCTTTT+CGG | + | chr8_1:91121043-91121062 | Msa1225660:intron | 55.0% |
| !! | TCCGCAGGACTTGGCTTTTC+GGG | + | chr8_1:91121044-91121063 | Msa1225660:intron | 55.0% |
| TCCCGAAAAGCCAAGTCCTG+CGG | - | chr8_1:91121048-91121067 | None:intergenic | 55.0% | |
| TAACTCAGCCTCTGCAGCAG+TGG | - | chr8_1:91121567-91121586 | None:intergenic | 55.0% | |
| AGTCTGATGGGATGTGTGGG+AGG | - | chr8_1:91121590-91121609 | None:intergenic | 55.0% | |
| TCCCACACATCCCATCAGAC+TGG | + | chr8_1:91121589-91121608 | Msa1225660:CDS | 55.0% | |
| CCCAGTCTGATGGGATGTGT+GGG | - | chr8_1:91121593-91121612 | None:intergenic | 55.0% | |
| CCCACACATCCCATCAGACT+GGG | + | chr8_1:91121590-91121609 | Msa1225660:CDS | 55.0% | |
| ACCCAGTCTGATGGGATGTG+TGG | - | chr8_1:91121594-91121613 | None:intergenic | 55.0% | |
| CTGTCAGGCCTGCTTTCTAC+AGG | - | chr8_1:91122270-91122289 | None:intergenic | 55.0% | |
| CTAGCCACTGTTTCACGCCA+CGG | - | chr8_1:91122386-91122405 | None:intergenic | 55.0% | |
| TCTGGACCACACGACACATC+TGG | - | chr8_1:91122416-91122435 | None:intergenic | 55.0% | |
| GCCAAGACAAGACACGAAGG+CGG | - | chr8_1:91122460-91122479 | None:intergenic | 55.0% | |
| TGCATCTTGGGTCCTGCGAT+AGG | + | chr8_1:91122489-91122508 | Msa1225660:intron | 55.0% | |
| GTCAATAGTGCCGCATTGCG+GGG | + | chr8_1:91122643-91122662 | Msa1225660:intron | 55.0% | |
| TCAATAGTGCCGCATTGCGG+GGG | + | chr8_1:91122644-91122663 | Msa1225660:intron | 55.0% | |
| ACAGCCGCAACTCCATTCTG+GGG | - | chr8_1:91122697-91122716 | None:intergenic | 55.0% | |
| GACAGCCGCAACTCCATTCT+GGG | - | chr8_1:91122698-91122717 | None:intergenic | 55.0% | |
| !! | TGGTTTTGCGTCTTGGGTGC+TGG | + | chr8_1:91122748-91122767 | Msa1225660:intron | 55.0% |
| ! | GGTTTTGCGTCTTGGGTGCT+GGG | + | chr8_1:91122749-91122768 | Msa1225660:intron | 55.0% |
| TATCTCCTGCAGGAGGAGCT+CGG | - | chr8_1:91123432-91123451 | None:intergenic | 55.0% | |
| GAGCACGTAGGGCTTCTTGG+AGG | + | chr8_1:91120466-91120485 | Msa1225660:CDS | 60.0% | |
| GGCTTGTCACCTTGCCAAGC+AGG | + | chr8_1:91121774-91121793 | Msa1225660:CDS | 60.0% | |
| CCACGGTAATGCGCCGCAAT+TGG | - | chr8_1:91122369-91122388 | None:intergenic | 60.0% | |
| CCAATTGCGGCGCATTACCG+TGG | + | chr8_1:91122366-91122385 | Msa1225660:intron | 60.0% | |
| TGCCTGCCAGATGTGTCGTG+TGG | + | chr8_1:91122407-91122426 | Msa1225660:intron | 60.0% | |
| GACCACACGACACATCTGGC+AGG | - | chr8_1:91122412-91122431 | None:intergenic | 60.0% | |
| GCCGCCTTCGTGTCTTGTCT+TGG | + | chr8_1:91122456-91122475 | Msa1225660:intron | 60.0% | |
| CACTGTGACGCTCCTATCGC+AGG | - | chr8_1:91122504-91122523 | None:intergenic | 60.0% | |
| CAATAGTGCCGCATTGCGGG+GGG | + | chr8_1:91122645-91122664 | Msa1225660:intron | 60.0% | |
| ! | GGCTACTTTGCCCCCCAGAA+TGG | + | chr8_1:91122682-91122701 | Msa1225660:intron | 60.0% |
| TGCCCCCCAGAATGGAGTTG+CGG | + | chr8_1:91122690-91122709 | Msa1225660:intron | 60.0% | |
| AGCCGCAACTCCATTCTGGG+GGG | - | chr8_1:91122695-91122714 | None:intergenic | 60.0% | |
| CAGCCGCAACTCCATTCTGG+GGG | - | chr8_1:91122696-91122715 | None:intergenic | 60.0% | |
| CGACAGCCGCAACTCCATTC+TGG | - | chr8_1:91122699-91122718 | None:intergenic | 60.0% | |
| !! | TGCGTCTTGGGTGCTGGGAT+AGG | + | chr8_1:91122754-91122773 | Msa1225660:intron | 60.0% |
| ATCTCCTGCAGGAGGAGCTC+GGG | - | chr8_1:91123431-91123450 | None:intergenic | 60.0% | |
| GGAAGCCTCCACTGCTGCAG+AGG | + | chr8_1:91121556-91121575 | Msa1225660:intron | 65.0% | |
| CTCAGCCTCTGCAGCAGTGG+AGG | - | chr8_1:91121564-91121583 | None:intergenic | 65.0% | |
| TAGTGCCGCATTGCGGGGGG+TGG | + | chr8_1:91122648-91122667 | Msa1225660:intron | 70.0% | |
| AGTGCCGCATTGCGGGGGGT+GGG | + | chr8_1:91122649-91122668 | Msa1225660:intron | 70.0% | |
| TCACCCCACCCCCCGCAATG+CGG | - | chr8_1:91122656-91122675 | None:intergenic | 70.0% | |
| CGGGGGGTGGGGTGAAACAG+TGG | + | chr8_1:91122661-91122680 | Msa1225660:intron | 70.0% | |
| TCTGCCCGAGCTCCTCCTGC+AGG | + | chr8_1:91123424-91123443 | Msa1225660:CDS | 70.0% | |
| GTGCCGCATTGCGGGGGGTG+GGG | + | chr8_1:91122650-91122669 | Msa1225660:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 91119839 | 91123857 | 91119839 | ID=Msa1225660;Name=Msa1225660 |
| chr8_1 | mRNA | 91119839 | 91123857 | 91119839 | ID=Msa1225660-mRNA-1;Parent=Msa1225660;Name=Msa1225660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=388|1|1|1|0.83|0.85|7|320|258 |
| chr8_1 | exon | 91119839 | 91120293 | 91119839 | ID=Msa1225660-mRNA-1:exon:33233;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91120370 | 91120673 | 91120370 | ID=Msa1225660-mRNA-1:exon:33234;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91120784 | 91120871 | 91120784 | ID=Msa1225660-mRNA-1:exon:33235;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91121557 | 91121666 | 91121557 | ID=Msa1225660-mRNA-1:exon:33236;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91121774 | 91121922 | 91121774 | ID=Msa1225660-mRNA-1:exon:33237;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91123404 | 91123459 | 91123404 | ID=Msa1225660-mRNA-1:exon:33238;Parent=Msa1225660-mRNA-1 |
| chr8_1 | exon | 91123535 | 91123857 | 91123535 | ID=Msa1225660-mRNA-1:exon:33239;Parent=Msa1225660-mRNA-1 |
| chr8_1 | five_prime_UTR | 91119839 | 91120226 | 91119839 | ID=Msa1225660-mRNA-1:five_prime_utr;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91120227 | 91120293 | 91120227 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91120370 | 91120673 | 91120370 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91120784 | 91120871 | 91120784 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91121557 | 91121666 | 91121557 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91121774 | 91121922 | 91121774 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91123404 | 91123459 | 91123404 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | CDS | 91123535 | 91123537 | 91123535 | ID=Msa1225660-mRNA-1:cds;Parent=Msa1225660-mRNA-1 |
| chr8_1 | three_prime_UTR | 91123538 | 91123857 | 91123538 | ID=Msa1225660-mRNA-1:three_prime_utr;Parent=Msa1225660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
