Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192480 | XP_003593631.1 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 2.52e-105 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192480 | sp|O49453|Y4844_ARATH | 65.152 | 132 | 46 | 0 | 17 | 148 | 17 | 148 | 2.51e-58 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192480 | G7ISE9 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.20e-105 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0192480 | 0.841268 | 5.266982e-58 | -8.615850e-47 |
| Msa0017390 | Msa0192480 | 0.807158 | 5.793979e-50 | -8.615850e-47 |
| Msa0028930 | Msa0192480 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
| Msa0031820 | Msa0192480 | 0.812988 | 3.212822e-51 | -8.615850e-47 |
| Msa0032920 | Msa0192480 | -0.807633 | 4.594452e-50 | -8.615850e-47 |
| Msa0033880 | Msa0192480 | 0.833107 | 6.448775e-56 | -8.615850e-47 |
| Msa0035130 | Msa0192480 | 0.811816 | 5.794627e-51 | -8.615850e-47 |
| Msa0037160 | Msa0192480 | 0.830933 | 2.221805e-55 | -8.615850e-47 |
| Msa0039250 | Msa0192480 | 0.830248 | 3.267982e-55 | -8.615850e-47 |
| Msa0040690 | Msa0192480 | 0.806350 | 8.586178e-50 | -8.615850e-47 |
| Msa0048180 | Msa0192480 | 0.813298 | 2.747293e-51 | -8.615850e-47 |
| Msa0057610 | Msa0192480 | 0.807403 | 5.142785e-50 | -8.615850e-47 |
| Msa0079110 | Msa0192480 | 0.814089 | 1.839849e-51 | -8.615850e-47 |
| Msa0081520 | Msa0192480 | 0.813200 | 2.886704e-51 | -8.615850e-47 |
| Msa0081650 | Msa0192480 | 0.807542 | 4.803293e-50 | -8.615850e-47 |
| Msa0090520 | Msa0192480 | 0.833743 | 4.476162e-56 | -8.615850e-47 |
| Msa0093850 | Msa0192480 | 0.863669 | 2.110975e-64 | -8.615850e-47 |
| Msa0098470 | Msa0192480 | 0.822300 | 2.550008e-53 | -8.615850e-47 |
| Msa0103240 | Msa0192480 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0103250 | Msa0192480 | 0.805795 | 1.123132e-49 | -8.615850e-47 |
| Msa0106320 | Msa0192480 | 0.831914 | 1.273915e-55 | -8.615850e-47 |
| Msa0106620 | Msa0192480 | 0.832929 | 7.139155e-56 | -8.615850e-47 |
| Msa0106710 | Msa0192480 | 0.826194 | 3.101599e-54 | -8.615850e-47 |
| Msa0123510 | Msa0192480 | 0.825094 | 5.652717e-54 | -8.615850e-47 |
| Msa0124450 | Msa0192480 | 0.824760 | 6.776785e-54 | -8.615850e-47 |
| Msa0127100 | Msa0192480 | 0.817194 | 3.742805e-52 | -8.615850e-47 |
| Msa0127850 | Msa0192480 | 0.838597 | 2.616698e-57 | -8.615850e-47 |
| Msa0131330 | Msa0192480 | 0.807501 | 4.900373e-50 | -8.615850e-47 |
| Msa0133720 | Msa0192480 | 0.815875 | 7.387881e-52 | -8.615850e-47 |
| Msa0136120 | Msa0192480 | 0.816200 | 6.251501e-52 | -8.615850e-47 |
| Msa0137990 | Msa0192480 | 0.834624 | 2.691026e-56 | -8.615850e-47 |
| Msa0138360 | Msa0192480 | 0.817006 | 4.124521e-52 | -8.615850e-47 |
| Msa0147980 | Msa0192480 | 0.828462 | 8.871108e-55 | -8.615850e-47 |
| Msa0152870 | Msa0192480 | 0.828590 | 8.259465e-55 | -8.615850e-47 |
| Msa0166460 | Msa0192480 | 0.801827 | 7.492971e-49 | -8.615850e-47 |
| Msa0171850 | Msa0192480 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0173890 | Msa0192480 | 0.831447 | 1.660342e-55 | -8.615850e-47 |
| Msa0174000 | Msa0192480 | 0.812590 | 3.926695e-51 | -8.615850e-47 |
| Msa0177210 | Msa0192480 | 0.810139 | 1.336941e-50 | -8.615850e-47 |
| Msa0178120 | Msa0192480 | 0.821014 | 5.058028e-53 | -8.615850e-47 |
| Msa0181230 | Msa0192480 | 0.814278 | 1.671261e-51 | -8.615850e-47 |
| Msa0183900 | Msa0192480 | 0.833345 | 5.626546e-56 | -8.615850e-47 |
| Msa0188350 | Msa0192480 | 0.805369 | 1.380206e-49 | -8.615850e-47 |
| Msa0192480 | Msa0197520 | 0.807516 | 4.865172e-50 | -8.615850e-47 |
| Msa0192480 | Msa0198800 | 0.800909 | 1.154912e-48 | -8.615850e-47 |
| Msa0192480 | Msa0205010 | 0.807400 | 5.149114e-50 | -8.615850e-47 |
| Msa0192480 | Msa0221000 | 0.830848 | 2.330520e-55 | -8.615850e-47 |
| Msa0192480 | Msa0223230 | 0.989894 | 4.000600e-180 | -8.615850e-47 |
| Msa0192480 | Msa0237210 | 0.806336 | 8.644099e-50 | -8.615850e-47 |
| Msa0192480 | Msa0240900 | 0.812325 | 4.488457e-51 | -8.615850e-47 |
| Msa0192480 | Msa0241630 | 0.817644 | 2.963133e-52 | -8.615850e-47 |
| Msa0192480 | Msa0241830 | 0.829510 | 4.944782e-55 | -8.615850e-47 |
| Msa0192480 | Msa0244980 | 0.808289 | 3.331781e-50 | -8.615850e-47 |
| Msa0192480 | Msa0249540 | 0.823267 | 1.518241e-53 | -8.615850e-47 |
| Msa0192480 | Msa0249580 | 0.824299 | 8.702085e-54 | -8.615850e-47 |
| Msa0192480 | Msa0261170 | 0.813444 | 2.551553e-51 | -8.615850e-47 |
| Msa0192480 | Msa0274980 | 0.812200 | 4.778717e-51 | -8.615850e-47 |
| Msa0192480 | Msa0277450 | 0.811028 | 8.590622e-51 | -8.615850e-47 |
| Msa0192480 | Msa0279850 | 0.828080 | 1.096456e-54 | -8.615850e-47 |
| Msa0192480 | Msa0281470 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0192480 | Msa0296250 | 0.817449 | 3.278365e-52 | -8.615850e-47 |
| Msa0192480 | Msa0300270 | 0.814959 | 1.181419e-51 | -8.615850e-47 |
| Msa0192480 | Msa0300320 | 0.834225 | 3.389785e-56 | -8.615850e-47 |
| Msa0192480 | Msa0305780 | 0.821116 | 4.791641e-53 | -8.615850e-47 |
| Msa0192480 | Msa0307270 | 0.816659 | 4.934216e-52 | -8.615850e-47 |
| Msa0192480 | Msa0315690 | 0.815734 | 7.943200e-52 | -8.615850e-47 |
| Msa0192480 | Msa0317970 | 0.823786 | 1.148492e-53 | -8.615850e-47 |
| Msa0192480 | Msa0322240 | 0.802288 | 6.023916e-49 | -8.615850e-47 |
| Msa0192480 | Msa0322560 | 0.803941 | 2.740733e-49 | -8.615850e-47 |
| Msa0192480 | Msa0322900 | 0.840842 | 6.813437e-58 | -8.615850e-47 |
| Msa0192480 | Msa0326590 | 0.829536 | 4.872536e-55 | -8.615850e-47 |
| Msa0192480 | Msa0337700 | 0.822944 | 1.805862e-53 | -8.615850e-47 |
| Msa0192480 | Msa0341690 | 0.876485 | 1.345046e-68 | -8.615850e-47 |
| Msa0192480 | Msa0342010 | 0.813361 | 2.661167e-51 | -8.615850e-47 |
| Msa0192480 | Msa0357900 | 0.804442 | 2.156432e-49 | -8.615850e-47 |
| Msa0192480 | Msa0378720 | 0.801758 | 7.741858e-49 | -8.615850e-47 |
| Msa0192480 | Msa0378970 | 0.825747 | 3.961019e-54 | -8.615850e-47 |
| Msa0192480 | Msa0405650 | 0.801254 | 9.820364e-49 | -8.615850e-47 |
| Msa0192480 | Msa0419720 | 0.841799 | 3.815509e-58 | -8.615850e-47 |
| Msa0192480 | Msa0423750 | 0.811076 | 8.386901e-51 | -8.615850e-47 |
| Msa0192480 | Msa0428580 | 0.823705 | 1.199524e-53 | -8.615850e-47 |
| Msa0192480 | Msa0435370 | 0.805958 | 1.038153e-49 | -8.615850e-47 |
| Msa0192480 | Msa0474940 | 0.803177 | 3.947771e-49 | -8.615850e-47 |
| Msa0192480 | Msa0479200 | 0.825040 | 5.821697e-54 | -8.615850e-47 |
| Msa0192480 | Msa0511770 | 0.810148 | 1.331262e-50 | -8.615850e-47 |
| Msa0192480 | Msa0518030 | 0.845387 | 4.193535e-59 | -8.615850e-47 |
| Msa0192480 | Msa0527020 | 0.814958 | 1.181700e-51 | -8.615850e-47 |
| Msa0192480 | Msa0527190 | 0.808797 | 2.596063e-50 | -8.615850e-47 |
| Msa0192480 | Msa0531250 | 0.825263 | 5.156612e-54 | -8.615850e-47 |
| Msa0192480 | Msa0531650 | 0.823378 | 1.430913e-53 | -8.615850e-47 |
| Msa0192480 | Msa0532980 | 0.833436 | 5.340466e-56 | -8.615850e-47 |
| Msa0192480 | Msa0547990 | 0.853506 | 2.284141e-61 | -8.615850e-47 |
| Msa0192480 | Msa0556010 | 0.807933 | 3.968059e-50 | -8.615850e-47 |
| Msa0192480 | Msa0560500 | 0.809458 | 1.873538e-50 | -8.615850e-47 |
| Msa0192480 | Msa0581690 | 0.811627 | 6.369803e-51 | -8.615850e-47 |
| Msa0192480 | Msa0582480 | 0.812551 | 4.004573e-51 | -8.615850e-47 |
| Msa0192480 | Msa0583500 | 0.820404 | 6.983482e-53 | -8.615850e-47 |
| Msa0192480 | Msa0584550 | 0.809623 | 1.726872e-50 | -8.615850e-47 |
| Msa0192480 | Msa0588090 | 0.836034 | 1.185447e-56 | -8.615850e-47 |
| Msa0192480 | Msa0593700 | 0.815530 | 8.819474e-52 | -8.615850e-47 |
| Msa0192480 | Msa0618950 | 0.815571 | 8.633552e-52 | -8.615850e-47 |
| Msa0192480 | Msa0628420 | 0.837997 | 3.734660e-57 | -8.615850e-47 |
| Msa0192480 | Msa0633570 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0192480 | Msa0638480 | 0.810451 | 1.145178e-50 | -8.615850e-47 |
| Msa0192480 | Msa0644030 | 0.840534 | 8.207340e-58 | -8.615850e-47 |
| Msa0192480 | Msa0658040 | 0.808618 | 2.834876e-50 | -8.615850e-47 |
| Msa0192480 | Msa0658590 | 0.814725 | 1.330766e-51 | -8.615850e-47 |
| Msa0192480 | Msa0666230 | 0.818466 | 1.932055e-52 | -8.615850e-47 |
| Msa0192480 | Msa0667770 | 0.802263 | 6.096272e-49 | -8.615850e-47 |
| Msa0192480 | Msa0667790 | 0.818627 | 1.776086e-52 | -8.615850e-47 |
| Msa0192480 | Msa0672100 | 0.807200 | 5.677726e-50 | -8.615850e-47 |
| Msa0192480 | Msa0673270 | 0.808703 | 2.719167e-50 | -8.615850e-47 |
| Msa0192480 | Msa0704890 | 0.800896 | 1.162146e-48 | -8.615850e-47 |
| Msa0192480 | Msa0744100 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0192480 | Msa0780930 | 0.827417 | 1.583028e-54 | -8.615850e-47 |
| Msa0192480 | Msa0785130 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0192480 | Msa0797930 | 0.809464 | 1.867716e-50 | -8.615850e-47 |
| Msa0192480 | Msa0808800 | 0.805725 | 1.162049e-49 | -8.615850e-47 |
| Msa0192480 | Msa0819540 | 0.803760 | 2.988705e-49 | -8.615850e-47 |
| Msa0192480 | Msa0825270 | 0.806439 | 8.221440e-50 | -8.615850e-47 |
| Msa0192480 | Msa0849440 | 0.821268 | 4.420253e-53 | -8.615850e-47 |
| Msa0192480 | Msa0865030 | 0.808462 | 3.061085e-50 | -8.615850e-47 |
| Msa0192480 | Msa0906780 | 0.804769 | 1.842529e-49 | -8.615850e-47 |
| Msa0192480 | Msa0934140 | 0.800835 | 1.195999e-48 | -8.615850e-47 |
| Msa0192480 | Msa0944200 | 0.806225 | 9.121579e-50 | -8.615850e-47 |
| Msa0192480 | Msa0945240 | 0.800604 | 1.333410e-48 | -8.615850e-47 |
| Msa0192480 | Msa0962070 | 0.804000 | 2.664464e-49 | -8.615850e-47 |
| Msa0192480 | Msa0980540 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0192480 | Msa0997430 | 0.841315 | 5.120388e-58 | -8.615850e-47 |
| Msa0192480 | Msa1006840 | 0.822663 | 2.099529e-53 | -8.615850e-47 |
| Msa0192480 | Msa1012740 | 0.828734 | 7.625095e-55 | -8.615850e-47 |
| Msa0192480 | Msa1034500 | 0.809848 | 1.544400e-50 | -8.615850e-47 |
| Msa0192480 | Msa1034860 | 0.803672 | 3.117583e-49 | -8.615850e-47 |
| Msa0192480 | Msa1040840 | 0.845884 | 3.073670e-59 | -8.615850e-47 |
| Msa0192480 | Msa1071050 | 0.809553 | 1.787275e-50 | -8.615850e-47 |
| Msa0192480 | Msa1073490 | 0.804172 | 2.453717e-49 | -8.615850e-47 |
| Msa0192480 | Msa1076560 | 0.818622 | 1.780766e-52 | -8.615850e-47 |
| Msa0192480 | Msa1079230 | 0.834802 | 2.428355e-56 | -8.615850e-47 |
| Msa0192480 | Msa1080640 | 0.826218 | 3.061202e-54 | -8.615850e-47 |
| Msa0192480 | Msa1089450 | 0.829862 | 4.058204e-55 | -8.615850e-47 |
| Msa0192480 | Msa1118450 | 0.815603 | 8.495285e-52 | -8.615850e-47 |
| Msa0192480 | Msa1123350 | 0.821344 | 4.245458e-53 | -8.615850e-47 |
| Msa0192480 | Msa1124110 | 0.804490 | 2.107199e-49 | -8.615850e-47 |
| Msa0192480 | Msa1126450 | 0.809536 | 1.802877e-50 | -8.615850e-47 |
| Msa0192480 | Msa1127590 | 0.832088 | 1.153985e-55 | -8.615850e-47 |
| Msa0192480 | Msa1135890 | 0.846602 | 1.959360e-59 | -8.615850e-47 |
| Msa0192480 | Msa1145240 | 0.969497 | 3.285496e-130 | -8.615850e-47 |
| Msa0192480 | Msa1145810 | 0.819274 | 1.265621e-52 | -8.615850e-47 |
| Msa0192480 | Msa1168950 | 0.808232 | 3.427052e-50 | -8.615850e-47 |
| Msa0192480 | Msa1169040 | 0.819806 | 9.570448e-53 | -8.615850e-47 |
| Msa0192480 | Msa1179630 | 0.807486 | 4.938170e-50 | -8.615850e-47 |
| Msa0192480 | Msa1206090 | 0.812031 | 5.201329e-51 | -8.615850e-47 |
| Msa0192480 | Msa1206230 | 0.820099 | 8.200856e-53 | -8.615850e-47 |
| Msa0192480 | Msa1206650 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0192480 | Msa1218450 | 0.806329 | 8.673717e-50 | -8.615850e-47 |
| Msa0192480 | Msa1219000 | 0.838148 | 3.416045e-57 | -8.615850e-47 |
| Msa0192480 | Msa1225660 | 0.817661 | 2.937445e-52 | -8.615850e-47 |
| Msa0192480 | Msa1226470 | 0.817642 | 2.966006e-52 | -8.615850e-47 |
| Msa0192480 | Msa1235250 | 0.801739 | 7.811816e-49 | -8.615850e-47 |
| Msa0192480 | Msa1256850 | 0.805877 | 1.079844e-49 | -8.615850e-47 |
| Msa0192480 | Msa1262890 | 0.817896 | 2.599059e-52 | -8.615850e-47 |
| Msa0192480 | Msa1277080 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0192480 | Msa1297970 | 0.827379 | 1.616163e-54 | -8.615850e-47 |
| Msa0192480 | Msa1307180 | 0.805462 | 1.319654e-49 | -8.615850e-47 |
| Msa0192480 | Msa1315750 | 0.818448 | 1.949914e-52 | -8.615850e-47 |
| Msa0192480 | Msa1329540 | 0.812942 | 3.289278e-51 | -8.615850e-47 |
| Msa0192480 | Msa1332760 | 0.852291 | 5.081932e-61 | -8.615850e-47 |
| Msa0192480 | Msa1335160 | 0.800376 | 1.483676e-48 | -8.615850e-47 |
| Msa0192480 | Msa1344310 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
| Msa0192480 | Msa1348090 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
| Msa0192480 | Msa1358480 | 0.821801 | 3.328807e-53 | -8.615850e-47 |
| Msa0192480 | Msa1360980 | 0.835457 | 1.659553e-56 | -8.615850e-47 |
| Msa0192480 | Msa1369150 | 0.808253 | 3.392046e-50 | -8.615850e-47 |
| Msa0192480 | Msa1373820 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0192480 | Msa1383530 | 0.804609 | 1.990013e-49 | -8.615850e-47 |
| Msa0192480 | Msa1386710 | 0.801780 | 7.660022e-49 | -8.615850e-47 |
| Msa0192480 | Msa1407190 | 0.805584 | 1.244268e-49 | -8.615850e-47 |
| Msa0192480 | Msa1411950 | 0.824947 | 6.124266e-54 | -8.615850e-47 |
| Msa0192480 | Msa1413180 | 0.841915 | 3.555544e-58 | -8.615850e-47 |
| Msa0192480 | Msa1421560 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0192480 | Msa1425880 | 0.803984 | 2.684769e-49 | -8.615850e-47 |
| Msa0192480 | Msa1429500 | 0.833904 | 4.078883e-56 | -8.615850e-47 |
| Msa0192480 | Msa1432130 | 0.806628 | 7.500451e-50 | -8.615850e-47 |
| Msa0192480 | Msa1432480 | 0.810008 | 1.426693e-50 | -8.615850e-47 |
| Msa0192480 | Msa1440310 | 0.826982 | 2.011567e-54 | -8.615850e-47 |
| Msa0192480 | Msa1443930 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0192480 | Msa1447180 | 0.806935 | 6.458826e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192480 | MtrunA17_Chr2g0282661 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 2.31e-109 | 307 |
| Msa0192480 | MtrunA17_Chr2g0324821 | 66.667 | 144 | 40 | 2 | 12 | 152 | 2 | 140 | 3.33e-65 | 195 |
| Msa0192480 | MtrunA17_Chr5g0413571 | 65.217 | 138 | 42 | 2 | 13 | 150 | 4 | 135 | 3.93e-60 | 182 |
| Msa0192480 | MtrunA17_Chr8g0365411 | 54.348 | 138 | 24 | 1 | 14 | 151 | 5 | 103 | 3.06e-46 | 146 |
| Msa0192480 | MtrunA17_Chr6g0476691 | 60.000 | 105 | 35 | 1 | 47 | 151 | 2 | 99 | 2.23e-38 | 126 |
| Msa0192480 | MtrunA17_Chr5g0438061 | 38.462 | 130 | 65 | 2 | 20 | 148 | 103 | 218 | 1.42e-20 | 84.0 |
| Msa0192480 | MtrunA17_Chr5g0438041 | 39.259 | 135 | 63 | 4 | 20 | 149 | 5 | 125 | 1.78e-20 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192480 | AT2G33845.1 | 68.382 | 136 | 38 | 1 | 17 | 152 | 52 | 182 | 1.95e-64 | 195 |
| Msa0192480 | AT1G23750.1 | 63.121 | 141 | 46 | 1 | 11 | 151 | 3 | 137 | 6.09e-63 | 189 |
| Msa0192480 | AT4G28440.1 | 65.152 | 132 | 46 | 0 | 17 | 148 | 17 | 148 | 2.56e-59 | 181 |
| Msa0192480 | AT1G10590.2 | 61.940 | 134 | 46 | 3 | 16 | 148 | 7 | 136 | 2.22e-56 | 173 |
| Msa0192480 | AT1G10590.1 | 61.940 | 134 | 46 | 3 | 16 | 148 | 7 | 136 | 2.22e-56 | 173 |
| Msa0192480 | AT1G10590.3 | 61.940 | 134 | 46 | 3 | 16 | 148 | 21 | 150 | 3.61e-56 | 173 |
| Msa0192480 | AT1G03810.1 | 60.902 | 133 | 49 | 1 | 17 | 149 | 14 | 143 | 3.20e-54 | 168 |
| Msa0192480 | AT1G23750.2 | 68.571 | 105 | 27 | 1 | 47 | 151 | 2 | 100 | 1.34e-47 | 149 |
Find 37 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAGATTGACATGTTTA+AGG | 0.167888 | 2_1:+8315713 | Msa0192480:CDS |
| AGACAATGGACTATAAAATT+TGG | 0.261459 | 2_1:-8316102 | None:intergenic |
| TCCGAAACTGTTCTGCAAAA+AGG | 0.301507 | 2_1:+8314441 | Msa0192480:CDS |
| ATGAAGTCAAGCATGTTAAA+AGG | 0.324760 | 2_1:-8315961 | None:intergenic |
| AAAGTGTGTCCGTTTGTTCC+TGG | 0.370124 | 2_1:-8314399 | None:intergenic |
| GCAAAGATTGACATGTTTAA+GGG | 0.371017 | 2_1:+8315714 | Msa0192480:CDS |
| ATCTCTCATTGAATATGAAT+TGG | 0.375517 | 2_1:+8315821 | Msa0192480:CDS |
| ATTCATATTCAATGAGAGAT+AGG | 0.377306 | 2_1:-8315818 | None:intergenic |
| TGAGGCTGGCCGTTGACAAA+TGG | 0.402663 | 2_1:+8315742 | Msa0192480:CDS |
| GAGGCTGGCCGTTGACAAAT+GGG | 0.404101 | 2_1:+8315743 | Msa0192480:CDS |
| CTGATATGGCAAAACTTAAC+TGG | 0.406337 | 2_1:+8315904 | Msa0192480:three_prime_UTR |
| TGCAGAGTTCGTTGTTAAAG+AGG | 0.437457 | 2_1:+8315788 | Msa0192480:CDS |
| AATGTTGTTTCACATGAAGA+TGG | 0.450601 | 2_1:+8314324 | Msa0192480:CDS |
| AAAACCCACTTTCACAAAAG+TGG | 0.453220 | 2_1:+8314365 | Msa0192480:CDS |
| CATTGCAGTTGAGCTTATGA+AGG | 0.477921 | 2_1:+8315665 | Msa0192480:intron |
| AGAGTAATTCATAGTTAAAG+AGG | 0.491467 | 2_1:+8315857 | Msa0192480:exon |
| TCTTTAACAACGAACTCTGC+AGG | 0.492103 | 2_1:-8315786 | None:intergenic |
| GCAGTTGAGCTTATGAAGGC+TGG | 0.493996 | 2_1:+8315669 | Msa0192480:intron |
| TGTCTCATCGGTGATGAAAC+TGG | 0.501588 | 2_1:+8314525 | Msa0192480:CDS |
| TATCAGCACAAACAAAAGAT+AGG | 0.506308 | 2_1:-8315887 | None:intergenic |
| CAGATGAAACCAGGAACAAA+CGG | 0.508711 | 2_1:+8314390 | Msa0192480:CDS |
| CGGACACACTTTGATTGCTA+AGG | 0.513860 | 2_1:+8314410 | Msa0192480:CDS |
| TGCTTATAATTGCAAGACAA+TGG | 0.553952 | 2_1:-8316116 | None:intergenic |
| CTTATCTCTGAGTGTCTCAT+CGG | 0.563970 | 2_1:+8314513 | Msa0192480:CDS |
| TTCACCGCTCGCAATGAACA+AGG | 0.567422 | 2_1:+8314558 | Msa0192480:CDS |
| ATTGCGAGCGGTGAAAATGA+TGG | 0.574482 | 2_1:-8314550 | None:intergenic |
| GTTTAAGGGATCAATGAGGC+TGG | 0.582292 | 2_1:+8315728 | Msa0192480:CDS |
| GGCTGGCCGTTGACAAATGG+GGG | 0.597410 | 2_1:+8315745 | Msa0192480:CDS |
| AGACACTCAGAGATAAGAGT+AGG | 0.601286 | 2_1:-8314507 | None:intergenic |
| CTTTAACAACGAACTCTGCA+GGG | 0.601895 | 2_1:-8315785 | None:intergenic |
| GAGTAATTCATAGTTAAAGA+GGG | 0.610715 | 2_1:+8315858 | Msa0192480:exon |
| ATACCACGAGAAGATGAAGA+AGG | 0.617287 | 2_1:-8314477 | None:intergenic |
| AGAACCTTGTTCATTGCGAG+CGG | 0.622173 | 2_1:-8314562 | None:intergenic |
| AGACCTTCTTCATCTTCTCG+TGG | 0.632890 | 2_1:+8314474 | Msa0192480:CDS |
| AGGCTGGCCGTTGACAAATG+GGG | 0.640279 | 2_1:+8315744 | Msa0192480:CDS |
| AAAGTGGATCAGATGAAACC+AGG | 0.663122 | 2_1:+8314381 | Msa0192480:CDS |
| ACATGTTTAAGGGATCAATG+AGG | 0.703797 | 2_1:+8315724 | Msa0192480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTCTTCTTCATT+TGG | + | chr2_1:8314673-8314692 | Msa0192480:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTCATTT+GGG | + | chr2_1:8314674-8314693 | Msa0192480:intron | 15.0% |
| !!! | TAAGATATGTTTTTATTGAT+TGG | + | chr2_1:8315582-8315601 | Msa0192480:intron | 15.0% |
| !!! | ATTTTTTTTTCTTCTTCATT+TGG | + | chr2_1:8314673-8314692 | Msa0192480:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTCATTT+GGG | + | chr2_1:8314674-8314693 | Msa0192480:intron | 15.0% |
| !!! | TAAGATATGTTTTTATTGAT+TGG | + | chr2_1:8315582-8315601 | Msa0192480:intron | 15.0% |
| !! | AAAACTGAAAAACAAAACAA+TGG | + | chr2_1:8314293-8314312 | Msa0192480:exon | 20.0% |
| !!! | CAGTTATCATTTTTAAGAAT+GGG | - | chr2_1:8314618-8314637 | None:intergenic | 20.0% |
| !!! | ACAGTTATCATTTTTAAGAA+TGG | - | chr2_1:8314619-8314638 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTCATTTG+GGG | + | chr2_1:8314675-8314694 | Msa0192480:intron | 20.0% |
| !!! | ATGAACACTAATTTAGATTT+TGG | - | chr2_1:8314751-8314770 | None:intergenic | 20.0% |
| !! | AATCTAAATTAGTGTTCATA+AGG | + | chr2_1:8314752-8314771 | Msa0192480:intron | 20.0% |
| !! | ATAAAAATGCTGATAAAAAG+GGG | - | chr2_1:8314875-8314894 | None:intergenic | 20.0% |
| !! | CATAAAAATGCTGATAAAAA+GGG | - | chr2_1:8314876-8314895 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGAGTTTAGAG+AGG | + | chr2_1:8314981-8315000 | Msa0192480:intron | 20.0% |
| !! | TTATGAAACTTATGATTCAT+TGG | + | chr2_1:8315030-8315049 | Msa0192480:intron | 20.0% |
| !!! | TTGTAGTTTATTTTCTTCAT+GGG | + | chr2_1:8315448-8315467 | Msa0192480:intron | 20.0% |
| !!! | GTTTTTATTGATTGGATATT+AGG | + | chr2_1:8315590-8315609 | Msa0192480:intron | 20.0% |
| !! | AAAACTGAAAAACAAAACAA+TGG | + | chr2_1:8314293-8314312 | Msa0192480:exon | 20.0% |
| !!! | CAGTTATCATTTTTAAGAAT+GGG | - | chr2_1:8314618-8314637 | None:intergenic | 20.0% |
| !!! | ACAGTTATCATTTTTAAGAA+TGG | - | chr2_1:8314619-8314638 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTCATTTG+GGG | + | chr2_1:8314675-8314694 | Msa0192480:intron | 20.0% |
| !!! | ATGAACACTAATTTAGATTT+TGG | - | chr2_1:8314751-8314770 | None:intergenic | 20.0% |
| !! | AATCTAAATTAGTGTTCATA+AGG | + | chr2_1:8314752-8314771 | Msa0192480:intron | 20.0% |
| !! | ATAAAAATGCTGATAAAAAG+GGG | - | chr2_1:8314875-8314894 | None:intergenic | 20.0% |
| !! | CATAAAAATGCTGATAAAAA+GGG | - | chr2_1:8314876-8314895 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGAGTTTAGAG+AGG | + | chr2_1:8314981-8315000 | Msa0192480:intron | 20.0% |
| !! | TTATGAAACTTATGATTCAT+TGG | + | chr2_1:8315030-8315049 | Msa0192480:intron | 20.0% |
| !!! | TTGTAGTTTATTTTCTTCAT+GGG | + | chr2_1:8315448-8315467 | Msa0192480:intron | 20.0% |
| !!! | GTTTTTATTGATTGGATATT+AGG | + | chr2_1:8315590-8315609 | Msa0192480:intron | 20.0% |
| !!! | GATCTACATTTTTTGAGATT+AGG | + | chr2_1:8314710-8314729 | Msa0192480:intron | 25.0% |
| ! | GCATAAAAATGCTGATAAAA+AGG | - | chr2_1:8314877-8314896 | None:intergenic | 25.0% |
| !!! | ATTTTTAGCTCTTTATGTAC+TGG | + | chr2_1:8314926-8314945 | Msa0192480:intron | 25.0% |
| ! | CAATATAGAAAGAAATAGTC+AGG | - | chr2_1:8314961-8314980 | None:intergenic | 25.0% |
| !! | AAACTTATGATTCATTGGTT+GGG | + | chr2_1:8315035-8315054 | Msa0192480:intron | 25.0% |
| ! | CTTATTTCCATAACATCTAT+AGG | + | chr2_1:8315285-8315304 | Msa0192480:intron | 25.0% |
| ! | TCTACAACATGGTAATATAA+AGG | - | chr2_1:8315353-8315372 | None:intergenic | 25.0% |
| ! | TTATAGTATAACCATGTAAG+TGG | - | chr2_1:8315397-8315416 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAGT+AGG | + | chr2_1:8315424-8315443 | Msa0192480:intron | 25.0% |
| !!! | CTTGTAGTTTATTTTCTTCA+TGG | + | chr2_1:8315447-8315466 | Msa0192480:intron | 25.0% |
| !!! | TGTAGTTTATTTTCTTCATG+GGG | + | chr2_1:8315449-8315468 | Msa0192480:intron | 25.0% |
| !! | ACATCAATAGTTTCTTTTAG+TGG | + | chr2_1:8315551-8315570 | Msa0192480:intron | 25.0% |
| ! | TATTAGGACTAATCAGTATA+AGG | + | chr2_1:8315606-8315625 | Msa0192480:intron | 25.0% |
| ! | ATTCATATTCAATGAGAGAT+AGG | - | chr2_1:8315821-8315840 | None:intergenic | 25.0% |
| ! | ATCTCTCATTGAATATGAAT+TGG | + | chr2_1:8315821-8315840 | Msa0192480:CDS | 25.0% |
| ! | AGAGTAATTCATAGTTAAAG+AGG | + | chr2_1:8315857-8315876 | Msa0192480:exon | 25.0% |
| ! | GAGTAATTCATAGTTAAAGA+GGG | + | chr2_1:8315858-8315877 | Msa0192480:exon | 25.0% |
| !! | CATTTTCACTTTAATTAGAC+TGG | + | chr2_1:8315933-8315952 | Msa0192480:three_prime_UTR | 25.0% |
| !! | ACTATCATATTTTTCTCAAG+TGG | - | chr2_1:8316053-8316072 | None:intergenic | 25.0% |
| !!! | AGACAATGGACTATAAAATT+TGG | - | chr2_1:8316105-8316124 | None:intergenic | 25.0% |
| !!! | GATCTACATTTTTTGAGATT+AGG | + | chr2_1:8314710-8314729 | Msa0192480:intron | 25.0% |
| ! | GCATAAAAATGCTGATAAAA+AGG | - | chr2_1:8314877-8314896 | None:intergenic | 25.0% |
| !!! | ATTTTTAGCTCTTTATGTAC+TGG | + | chr2_1:8314926-8314945 | Msa0192480:intron | 25.0% |
| ! | CAATATAGAAAGAAATAGTC+AGG | - | chr2_1:8314961-8314980 | None:intergenic | 25.0% |
| !! | AAACTTATGATTCATTGGTT+GGG | + | chr2_1:8315035-8315054 | Msa0192480:intron | 25.0% |
| ! | CTTATTTCCATAACATCTAT+AGG | + | chr2_1:8315285-8315304 | Msa0192480:intron | 25.0% |
| ! | TCTACAACATGGTAATATAA+AGG | - | chr2_1:8315353-8315372 | None:intergenic | 25.0% |
| ! | TTATAGTATAACCATGTAAG+TGG | - | chr2_1:8315397-8315416 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAGT+AGG | + | chr2_1:8315424-8315443 | Msa0192480:intron | 25.0% |
| !!! | CTTGTAGTTTATTTTCTTCA+TGG | + | chr2_1:8315447-8315466 | Msa0192480:intron | 25.0% |
| !!! | TGTAGTTTATTTTCTTCATG+GGG | + | chr2_1:8315449-8315468 | Msa0192480:intron | 25.0% |
| !! | ACATCAATAGTTTCTTTTAG+TGG | + | chr2_1:8315551-8315570 | Msa0192480:intron | 25.0% |
| ! | TATTAGGACTAATCAGTATA+AGG | + | chr2_1:8315606-8315625 | Msa0192480:intron | 25.0% |
| ! | ATTCATATTCAATGAGAGAT+AGG | - | chr2_1:8315821-8315840 | None:intergenic | 25.0% |
| ! | ATCTCTCATTGAATATGAAT+TGG | + | chr2_1:8315821-8315840 | Msa0192480:CDS | 25.0% |
| ! | AGAGTAATTCATAGTTAAAG+AGG | + | chr2_1:8315857-8315876 | Msa0192480:exon | 25.0% |
| ! | GAGTAATTCATAGTTAAAGA+GGG | + | chr2_1:8315858-8315877 | Msa0192480:exon | 25.0% |
| !! | CATTTTCACTTTAATTAGAC+TGG | + | chr2_1:8315933-8315952 | Msa0192480:three_prime_UTR | 25.0% |
| !! | ACTATCATATTTTTCTCAAG+TGG | - | chr2_1:8316053-8316072 | None:intergenic | 25.0% |
| !!! | AGACAATGGACTATAAAATT+TGG | - | chr2_1:8316105-8316124 | None:intergenic | 25.0% |
| !! | AATGTTGTTTCACATGAAGA+TGG | + | chr2_1:8314324-8314343 | Msa0192480:CDS | 30.0% |
| AAAAATGATAACTGTTCTCG+TGG | + | chr2_1:8314624-8314643 | Msa0192480:intron | 30.0% | |
| AAAATGATAACTGTTCTCGT+GGG | + | chr2_1:8314625-8314644 | Msa0192480:intron | 30.0% | |
| GGGGATCTAAAAATAAACAT+TGG | - | chr2_1:8314856-8314875 | None:intergenic | 30.0% | |
| TATTAAGAGTTTAGAGAGGA+AGG | + | chr2_1:8314985-8315004 | Msa0192480:intron | 30.0% | |
| GAAACTTATGATTCATTGGT+TGG | + | chr2_1:8315034-8315053 | Msa0192480:intron | 30.0% | |
| TAAACACTTGTGACACTATT+TGG | + | chr2_1:8315215-8315234 | Msa0192480:intron | 30.0% | |
| AAACACTTGTGACACTATTT+GGG | + | chr2_1:8315216-8315235 | Msa0192480:intron | 30.0% | |
| AAGCTATCCTATAGATGTTA+TGG | - | chr2_1:8315295-8315314 | None:intergenic | 30.0% | |
| !! | AACAAGCTATTTCTACAACA+TGG | - | chr2_1:8315364-8315383 | None:intergenic | 30.0% |
| AAATAAACTACAAGCCTACT+TGG | - | chr2_1:8315441-8315460 | None:intergenic | 30.0% | |
| AAGAAACTATTGATGTTGCA+GGG | - | chr2_1:8315547-8315566 | None:intergenic | 30.0% | |
| AAAGAAACTATTGATGTTGC+AGG | - | chr2_1:8315548-8315567 | None:intergenic | 30.0% | |
| TGCAAAGATTGACATGTTTA+AGG | + | chr2_1:8315713-8315732 | Msa0192480:CDS | 30.0% | |
| GCAAAGATTGACATGTTTAA+GGG | + | chr2_1:8315714-8315733 | Msa0192480:CDS | 30.0% | |
| TATCAGCACAAACAAAAGAT+AGG | - | chr2_1:8315890-8315909 | None:intergenic | 30.0% | |
| !! | ATCTTTTGTTTGTGCTGATA+TGG | + | chr2_1:8315890-8315909 | Msa0192480:three_prime_UTR | 30.0% |
| ATGAAGTCAAGCATGTTAAA+AGG | - | chr2_1:8315964-8315983 | None:intergenic | 30.0% | |
| ! | AACATGCTTGACTTCATTTT+AGG | + | chr2_1:8315967-8315986 | Msa0192480:three_prime_UTR | 30.0% |
| !! | AATGTTGTTTCACATGAAGA+TGG | + | chr2_1:8314324-8314343 | Msa0192480:CDS | 30.0% |
| AAAAATGATAACTGTTCTCG+TGG | + | chr2_1:8314624-8314643 | Msa0192480:intron | 30.0% | |
| AAAATGATAACTGTTCTCGT+GGG | + | chr2_1:8314625-8314644 | Msa0192480:intron | 30.0% | |
| GGGGATCTAAAAATAAACAT+TGG | - | chr2_1:8314856-8314875 | None:intergenic | 30.0% | |
| TATTAAGAGTTTAGAGAGGA+AGG | + | chr2_1:8314985-8315004 | Msa0192480:intron | 30.0% | |
| GAAACTTATGATTCATTGGT+TGG | + | chr2_1:8315034-8315053 | Msa0192480:intron | 30.0% | |
| TAAACACTTGTGACACTATT+TGG | + | chr2_1:8315215-8315234 | Msa0192480:intron | 30.0% | |
| AAACACTTGTGACACTATTT+GGG | + | chr2_1:8315216-8315235 | Msa0192480:intron | 30.0% | |
| AAGCTATCCTATAGATGTTA+TGG | - | chr2_1:8315295-8315314 | None:intergenic | 30.0% | |
| !! | AACAAGCTATTTCTACAACA+TGG | - | chr2_1:8315364-8315383 | None:intergenic | 30.0% |
| AAATAAACTACAAGCCTACT+TGG | - | chr2_1:8315441-8315460 | None:intergenic | 30.0% | |
| AAGAAACTATTGATGTTGCA+GGG | - | chr2_1:8315547-8315566 | None:intergenic | 30.0% | |
| AAAGAAACTATTGATGTTGC+AGG | - | chr2_1:8315548-8315567 | None:intergenic | 30.0% | |
| TGCAAAGATTGACATGTTTA+AGG | + | chr2_1:8315713-8315732 | Msa0192480:CDS | 30.0% | |
| GCAAAGATTGACATGTTTAA+GGG | + | chr2_1:8315714-8315733 | Msa0192480:CDS | 30.0% | |
| TATCAGCACAAACAAAAGAT+AGG | - | chr2_1:8315890-8315909 | None:intergenic | 30.0% | |
| !! | ATCTTTTGTTTGTGCTGATA+TGG | + | chr2_1:8315890-8315909 | Msa0192480:three_prime_UTR | 30.0% |
| ATGAAGTCAAGCATGTTAAA+AGG | - | chr2_1:8315964-8315983 | None:intergenic | 30.0% | |
| ! | AACATGCTTGACTTCATTTT+AGG | + | chr2_1:8315967-8315986 | Msa0192480:three_prime_UTR | 30.0% |
| AAAACCCACTTTCACAAAAG+TGG | + | chr2_1:8314365-8314384 | Msa0192480:CDS | 35.0% | |
| !! | TGATCCACTTTTGTGAAAGT+GGG | - | chr2_1:8314372-8314391 | None:intergenic | 35.0% |
| ! | ACCTTTTTGCAGAACAGTTT+CGG | - | chr2_1:8314445-8314464 | None:intergenic | 35.0% |
| GTGTTCATAAGGTTCTTAGT+TGG | + | chr2_1:8314763-8314782 | Msa0192480:intron | 35.0% | |
| AGTTTAGAGAGGAAGGAAAA+TGG | + | chr2_1:8315094-8315113 | Msa0192480:intron | 35.0% | |
| GTTTAGAGAGGAAGGAAAAT+GGG | + | chr2_1:8315095-8315114 | Msa0192480:intron | 35.0% | |
| TCATTCTCAATCATTCCTTC+AGG | + | chr2_1:8315131-8315150 | Msa0192480:intron | 35.0% | |
| CATTCTCAATCATTCCTTCA+GGG | + | chr2_1:8315132-8315151 | Msa0192480:intron | 35.0% | |
| AGCAAATCCTTGAGTAAGTA+GGG | + | chr2_1:8315155-8315174 | Msa0192480:intron | 35.0% | |
| TATGCAAATGCTTGTGCATA+AGG | - | chr2_1:8315483-8315502 | None:intergenic | 35.0% | |
| CACAAGCATTTGCATATAAG+TGG | + | chr2_1:8315487-8315506 | Msa0192480:intron | 35.0% | |
| ACATGTTTAAGGGATCAATG+AGG | + | chr2_1:8315724-8315743 | Msa0192480:CDS | 35.0% | |
| CTGATATGGCAAAACTTAAC+TGG | + | chr2_1:8315904-8315923 | Msa0192480:three_prime_UTR | 35.0% | |
| AAAACCCACTTTCACAAAAG+TGG | + | chr2_1:8314365-8314384 | Msa0192480:CDS | 35.0% | |
| !! | TGATCCACTTTTGTGAAAGT+GGG | - | chr2_1:8314372-8314391 | None:intergenic | 35.0% |
| ! | ACCTTTTTGCAGAACAGTTT+CGG | - | chr2_1:8314445-8314464 | None:intergenic | 35.0% |
| GTGTTCATAAGGTTCTTAGT+TGG | + | chr2_1:8314763-8314782 | Msa0192480:intron | 35.0% | |
| AGTTTAGAGAGGAAGGAAAA+TGG | + | chr2_1:8315094-8315113 | Msa0192480:intron | 35.0% | |
| GTTTAGAGAGGAAGGAAAAT+GGG | + | chr2_1:8315095-8315114 | Msa0192480:intron | 35.0% | |
| TCATTCTCAATCATTCCTTC+AGG | + | chr2_1:8315131-8315150 | Msa0192480:intron | 35.0% | |
| CATTCTCAATCATTCCTTCA+GGG | + | chr2_1:8315132-8315151 | Msa0192480:intron | 35.0% | |
| AGCAAATCCTTGAGTAAGTA+GGG | + | chr2_1:8315155-8315174 | Msa0192480:intron | 35.0% | |
| TATGCAAATGCTTGTGCATA+AGG | - | chr2_1:8315483-8315502 | None:intergenic | 35.0% | |
| CACAAGCATTTGCATATAAG+TGG | + | chr2_1:8315487-8315506 | Msa0192480:intron | 35.0% | |
| ACATGTTTAAGGGATCAATG+AGG | + | chr2_1:8315724-8315743 | Msa0192480:CDS | 35.0% | |
| CTGATATGGCAAAACTTAAC+TGG | + | chr2_1:8315904-8315923 | Msa0192480:three_prime_UTR | 35.0% | |
| !! | AAAGTGGGTTTTCTCTTTGC+GGG | - | chr2_1:8314357-8314376 | None:intergenic | 40.0% |
| !! | GAAAGTGGGTTTTCTCTTTG+CGG | - | chr2_1:8314358-8314377 | None:intergenic | 40.0% |
| !! | CTGATCCACTTTTGTGAAAG+TGG | - | chr2_1:8314373-8314392 | None:intergenic | 40.0% |
| AAAGTGGATCAGATGAAACC+AGG | + | chr2_1:8314381-8314400 | Msa0192480:CDS | 40.0% | |
| CAGATGAAACCAGGAACAAA+CGG | + | chr2_1:8314390-8314409 | Msa0192480:CDS | 40.0% | |
| ! | TTTTTGCAGAACAGTTTCGG+AGG | - | chr2_1:8314442-8314461 | None:intergenic | 40.0% |
| TCCGAAACTGTTCTGCAAAA+AGG | + | chr2_1:8314441-8314460 | Msa0192480:CDS | 40.0% | |
| GAAACTGTTCTGCAAAAAGG+TGG | + | chr2_1:8314444-8314463 | Msa0192480:CDS | 40.0% | |
| ATACCACGAGAAGATGAAGA+AGG | - | chr2_1:8314480-8314499 | None:intergenic | 40.0% | |
| AGACACTCAGAGATAAGAGT+AGG | - | chr2_1:8314510-8314529 | None:intergenic | 40.0% | |
| CTTATCTCTGAGTGTCTCAT+CGG | + | chr2_1:8314513-8314532 | Msa0192480:CDS | 40.0% | |
| ! | GGTGATTGTTACACCCATTT+TGG | + | chr2_1:8314784-8314803 | Msa0192480:intron | 40.0% |
| CCGAGTAACAACACCAAAAT+GGG | - | chr2_1:8314800-8314819 | None:intergenic | 40.0% | |
| !!! | CCCATTTTGGTGTTGTTACT+CGG | + | chr2_1:8314797-8314816 | Msa0192480:intron | 40.0% |
| TCCGAGTAACAACACCAAAA+TGG | - | chr2_1:8314801-8314820 | None:intergenic | 40.0% | |
| ! | TGATTCATTGGTTGGGCTTT+AGG | + | chr2_1:8315042-8315061 | Msa0192480:intron | 40.0% |
| ! | GATTCATTGGTTGGGCTTTA+GGG | + | chr2_1:8315043-8315062 | Msa0192480:intron | 40.0% |
| ! | ATTCATTGGTTGGGCTTTAG+GGG | + | chr2_1:8315044-8315063 | Msa0192480:intron | 40.0% |
| !! | TGGGCTTTAGGGGATAAAAA+TGG | + | chr2_1:8315054-8315073 | Msa0192480:intron | 40.0% |
| CTCTCTAAACTCATGAGACA+TGG | - | chr2_1:8315085-8315104 | None:intergenic | 40.0% | |
| CATGTCTCATGAGTTTAGAG+AGG | + | chr2_1:8315083-8315102 | Msa0192480:intron | 40.0% | |
| TCTCATGAGTTTAGAGAGGA+AGG | + | chr2_1:8315087-8315106 | Msa0192480:intron | 40.0% | |
| GAGCAAATCCTTGAGTAAGT+AGG | + | chr2_1:8315154-8315173 | Msa0192480:intron | 40.0% | |
| CAAACAACCCTACTTACTCA+AGG | - | chr2_1:8315165-8315184 | None:intergenic | 40.0% | |
| CTTGAGTAAGTAGGGTTGTT+TGG | + | chr2_1:8315163-8315182 | Msa0192480:intron | 40.0% | |
| GTAAGTAGGGTTGTTTGGAT+TGG | + | chr2_1:8315168-8315187 | Msa0192480:intron | 40.0% | |
| CATTGCAGTTGAGCTTATGA+AGG | + | chr2_1:8315665-8315684 | Msa0192480:intron | 40.0% | |
| CTTTAACAACGAACTCTGCA+GGG | - | chr2_1:8315788-8315807 | None:intergenic | 40.0% | |
| TCTTTAACAACGAACTCTGC+AGG | - | chr2_1:8315789-8315808 | None:intergenic | 40.0% | |
| TGCAGAGTTCGTTGTTAAAG+AGG | + | chr2_1:8315788-8315807 | Msa0192480:CDS | 40.0% | |
| !! | AAAGTGGGTTTTCTCTTTGC+GGG | - | chr2_1:8314357-8314376 | None:intergenic | 40.0% |
| !! | GAAAGTGGGTTTTCTCTTTG+CGG | - | chr2_1:8314358-8314377 | None:intergenic | 40.0% |
| !! | CTGATCCACTTTTGTGAAAG+TGG | - | chr2_1:8314373-8314392 | None:intergenic | 40.0% |
| AAAGTGGATCAGATGAAACC+AGG | + | chr2_1:8314381-8314400 | Msa0192480:CDS | 40.0% | |
| CAGATGAAACCAGGAACAAA+CGG | + | chr2_1:8314390-8314409 | Msa0192480:CDS | 40.0% | |
| ! | TTTTTGCAGAACAGTTTCGG+AGG | - | chr2_1:8314442-8314461 | None:intergenic | 40.0% |
| TCCGAAACTGTTCTGCAAAA+AGG | + | chr2_1:8314441-8314460 | Msa0192480:CDS | 40.0% | |
| GAAACTGTTCTGCAAAAAGG+TGG | + | chr2_1:8314444-8314463 | Msa0192480:CDS | 40.0% | |
| ATACCACGAGAAGATGAAGA+AGG | - | chr2_1:8314480-8314499 | None:intergenic | 40.0% | |
| AGACACTCAGAGATAAGAGT+AGG | - | chr2_1:8314510-8314529 | None:intergenic | 40.0% | |
| CTTATCTCTGAGTGTCTCAT+CGG | + | chr2_1:8314513-8314532 | Msa0192480:CDS | 40.0% | |
| ! | GGTGATTGTTACACCCATTT+TGG | + | chr2_1:8314784-8314803 | Msa0192480:intron | 40.0% |
| CCGAGTAACAACACCAAAAT+GGG | - | chr2_1:8314800-8314819 | None:intergenic | 40.0% | |
| !!! | CCCATTTTGGTGTTGTTACT+CGG | + | chr2_1:8314797-8314816 | Msa0192480:intron | 40.0% |
| TCCGAGTAACAACACCAAAA+TGG | - | chr2_1:8314801-8314820 | None:intergenic | 40.0% | |
| ! | TGATTCATTGGTTGGGCTTT+AGG | + | chr2_1:8315042-8315061 | Msa0192480:intron | 40.0% |
| ! | GATTCATTGGTTGGGCTTTA+GGG | + | chr2_1:8315043-8315062 | Msa0192480:intron | 40.0% |
| ! | ATTCATTGGTTGGGCTTTAG+GGG | + | chr2_1:8315044-8315063 | Msa0192480:intron | 40.0% |
| !! | TGGGCTTTAGGGGATAAAAA+TGG | + | chr2_1:8315054-8315073 | Msa0192480:intron | 40.0% |
| CTCTCTAAACTCATGAGACA+TGG | - | chr2_1:8315085-8315104 | None:intergenic | 40.0% | |
| CATGTCTCATGAGTTTAGAG+AGG | + | chr2_1:8315083-8315102 | Msa0192480:intron | 40.0% | |
| TCTCATGAGTTTAGAGAGGA+AGG | + | chr2_1:8315087-8315106 | Msa0192480:intron | 40.0% | |
| GAGCAAATCCTTGAGTAAGT+AGG | + | chr2_1:8315154-8315173 | Msa0192480:intron | 40.0% | |
| CAAACAACCCTACTTACTCA+AGG | - | chr2_1:8315165-8315184 | None:intergenic | 40.0% | |
| CTTGAGTAAGTAGGGTTGTT+TGG | + | chr2_1:8315163-8315182 | Msa0192480:intron | 40.0% | |
| GTAAGTAGGGTTGTTTGGAT+TGG | + | chr2_1:8315168-8315187 | Msa0192480:intron | 40.0% | |
| CATTGCAGTTGAGCTTATGA+AGG | + | chr2_1:8315665-8315684 | Msa0192480:intron | 40.0% | |
| CTTTAACAACGAACTCTGCA+GGG | - | chr2_1:8315788-8315807 | None:intergenic | 40.0% | |
| TCTTTAACAACGAACTCTGC+AGG | - | chr2_1:8315789-8315808 | None:intergenic | 40.0% | |
| TGCAGAGTTCGTTGTTAAAG+AGG | + | chr2_1:8315788-8315807 | Msa0192480:CDS | 40.0% | |
| AAAGTGTGTCCGTTTGTTCC+TGG | - | chr2_1:8314402-8314421 | None:intergenic | 45.0% | |
| CGGACACACTTTGATTGCTA+AGG | + | chr2_1:8314410-8314429 | Msa0192480:CDS | 45.0% | |
| ACTGTTCTGCAAAAAGGTGG+AGG | + | chr2_1:8314447-8314466 | Msa0192480:CDS | 45.0% | |
| AGACCTTCTTCATCTTCTCG+TGG | + | chr2_1:8314474-8314493 | Msa0192480:CDS | 45.0% | |
| TGTCTCATCGGTGATGAAAC+TGG | + | chr2_1:8314525-8314544 | Msa0192480:CDS | 45.0% | |
| ATTGCGAGCGGTGAAAATGA+TGG | - | chr2_1:8314553-8314572 | None:intergenic | 45.0% | |
| AGAACCTTGTTCATTGCGAG+CGG | - | chr2_1:8314565-8314584 | None:intergenic | 45.0% | |
| AGAGGAAGGAAAATGGGAGT+AGG | + | chr2_1:8315101-8315120 | Msa0192480:intron | 45.0% | |
| TCGCAGTCGATTGCAAATTG+TGG | - | chr2_1:8315522-8315541 | None:intergenic | 45.0% | |
| GTTTAAGGGATCAATGAGGC+TGG | + | chr2_1:8315728-8315747 | Msa0192480:CDS | 45.0% | |
| AAAGTGTGTCCGTTTGTTCC+TGG | - | chr2_1:8314402-8314421 | None:intergenic | 45.0% | |
| CGGACACACTTTGATTGCTA+AGG | + | chr2_1:8314410-8314429 | Msa0192480:CDS | 45.0% | |
| ACTGTTCTGCAAAAAGGTGG+AGG | + | chr2_1:8314447-8314466 | Msa0192480:CDS | 45.0% | |
| AGACCTTCTTCATCTTCTCG+TGG | + | chr2_1:8314474-8314493 | Msa0192480:CDS | 45.0% | |
| TGTCTCATCGGTGATGAAAC+TGG | + | chr2_1:8314525-8314544 | Msa0192480:CDS | 45.0% | |
| ATTGCGAGCGGTGAAAATGA+TGG | - | chr2_1:8314553-8314572 | None:intergenic | 45.0% | |
| AGAACCTTGTTCATTGCGAG+CGG | - | chr2_1:8314565-8314584 | None:intergenic | 45.0% | |
| AGAGGAAGGAAAATGGGAGT+AGG | + | chr2_1:8315101-8315120 | Msa0192480:intron | 45.0% | |
| TCGCAGTCGATTGCAAATTG+TGG | - | chr2_1:8315522-8315541 | None:intergenic | 45.0% | |
| GTTTAAGGGATCAATGAGGC+TGG | + | chr2_1:8315728-8315747 | Msa0192480:CDS | 45.0% | |
| ! | GGGTTTTCTCTTTGCGGGTT+TGG | - | chr2_1:8314352-8314371 | None:intergenic | 50.0% |
| TTCACCGCTCGCAATGAACA+AGG | + | chr2_1:8314558-8314577 | Msa0192480:CDS | 50.0% | |
| ! | CTCAAGGATTTGCTCCCTGA+AGG | - | chr2_1:8315149-8315168 | None:intergenic | 50.0% |
| TCTTAAGCGCGCCACTTACA+TGG | + | chr2_1:8315383-8315402 | Msa0192480:intron | 50.0% | |
| GCAGTTGAGCTTATGAAGGC+TGG | + | chr2_1:8315669-8315688 | Msa0192480:intron | 50.0% | |
| AATGCGCCCCCATTTGTCAA+CGG | - | chr2_1:8315754-8315773 | None:intergenic | 50.0% | |
| ! | GGGTTTTCTCTTTGCGGGTT+TGG | - | chr2_1:8314352-8314371 | None:intergenic | 50.0% |
| TTCACCGCTCGCAATGAACA+AGG | + | chr2_1:8314558-8314577 | Msa0192480:CDS | 50.0% | |
| ! | CTCAAGGATTTGCTCCCTGA+AGG | - | chr2_1:8315149-8315168 | None:intergenic | 50.0% |
| TCTTAAGCGCGCCACTTACA+TGG | + | chr2_1:8315383-8315402 | Msa0192480:intron | 50.0% | |
| GCAGTTGAGCTTATGAAGGC+TGG | + | chr2_1:8315669-8315688 | Msa0192480:intron | 50.0% | |
| AATGCGCCCCCATTTGTCAA+CGG | - | chr2_1:8315754-8315773 | None:intergenic | 50.0% | |
| ! | TGAGGCTGGCCGTTGACAAA+TGG | + | chr2_1:8315742-8315761 | Msa0192480:CDS | 55.0% |
| ! | GAGGCTGGCCGTTGACAAAT+GGG | + | chr2_1:8315743-8315762 | Msa0192480:CDS | 55.0% |
| ! | AGGCTGGCCGTTGACAAATG+GGG | + | chr2_1:8315744-8315763 | Msa0192480:CDS | 55.0% |
| ! | TGACAAATGGGGGCGCATTG+AGG | + | chr2_1:8315755-8315774 | Msa0192480:CDS | 55.0% |
| ! | TGAGGCTGGCCGTTGACAAA+TGG | + | chr2_1:8315742-8315761 | Msa0192480:CDS | 55.0% |
| ! | GAGGCTGGCCGTTGACAAAT+GGG | + | chr2_1:8315743-8315762 | Msa0192480:CDS | 55.0% |
| ! | AGGCTGGCCGTTGACAAATG+GGG | + | chr2_1:8315744-8315763 | Msa0192480:CDS | 55.0% |
| ! | TGACAAATGGGGGCGCATTG+AGG | + | chr2_1:8315755-8315774 | Msa0192480:CDS | 55.0% |
| ! | GGCTGGCCGTTGACAAATGG+GGG | + | chr2_1:8315745-8315764 | Msa0192480:CDS | 60.0% |
| ! | GGCTGGCCGTTGACAAATGG+GGG | + | chr2_1:8315745-8315764 | Msa0192480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 8314169 | 8316125 | 8314169 | ID=Msa0192480;Name=Msa0192480 |
| chr2_1 | mRNA | 8314169 | 8316125 | 8314169 | ID=Msa0192480-mRNA-1;Parent=Msa0192480;Name=Msa0192480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=143|1|1|1|1|1|2|262|152 |
| chr2_1 | exon | 8314169 | 8314579 | 8314169 | ID=Msa0192480-mRNA-1:exon:3816;Parent=Msa0192480-mRNA-1 |
| chr2_1 | exon | 8315673 | 8316125 | 8315673 | ID=Msa0192480-mRNA-1:exon:3817;Parent=Msa0192480-mRNA-1 |
| chr2_1 | five_prime_UTR | 8314169 | 8314311 | 8314169 | ID=Msa0192480-mRNA-1:five_prime_utr;Parent=Msa0192480-mRNA-1 |
| chr2_1 | CDS | 8314312 | 8314579 | 8314312 | ID=Msa0192480-mRNA-1:cds;Parent=Msa0192480-mRNA-1 |
| chr2_1 | CDS | 8315673 | 8315863 | 8315673 | ID=Msa0192480-mRNA-1:cds;Parent=Msa0192480-mRNA-1 |
| chr2_1 | three_prime_UTR | 8315864 | 8316125 | 8315864 | ID=Msa0192480-mRNA-1:three_prime_utr;Parent=Msa0192480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
