Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223230 | XP_003593631.1 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 2.52e-105 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223230 | sp|O49453|Y4844_ARATH | 65.152 | 132 | 46 | 0 | 17 | 148 | 17 | 148 | 2.51e-58 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223230 | G7ISE9 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 1.20e-105 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0223230 | 0.846645 | 1.907299e-59 | -8.615850e-47 |
| Msa0017390 | Msa0223230 | 0.815710 | 8.041344e-52 | -8.615850e-47 |
| Msa0028930 | Msa0223230 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa0031820 | Msa0223230 | 0.816383 | 5.690397e-52 | -8.615850e-47 |
| Msa0032920 | Msa0223230 | -0.809733 | 1.635405e-50 | -8.615850e-47 |
| Msa0033880 | Msa0223230 | 0.823883 | 1.089932e-53 | -8.615850e-47 |
| Msa0035130 | Msa0223230 | 0.817338 | 3.472256e-52 | -8.615850e-47 |
| Msa0037160 | Msa0223230 | 0.839464 | 1.559887e-57 | -8.615850e-47 |
| Msa0039250 | Msa0223230 | 0.826181 | 3.122789e-54 | -8.615850e-47 |
| Msa0040690 | Msa0223230 | 0.809626 | 1.724604e-50 | -8.615850e-47 |
| Msa0048180 | Msa0223230 | 0.806156 | 9.433141e-50 | -8.615850e-47 |
| Msa0057590 | Msa0223230 | 0.801639 | 8.188002e-49 | -8.615850e-47 |
| Msa0065550 | Msa0223230 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0079110 | Msa0223230 | 0.826151 | 3.175207e-54 | -8.615850e-47 |
| Msa0081520 | Msa0223230 | 0.814350 | 1.611456e-51 | -8.615850e-47 |
| Msa0081650 | Msa0223230 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0090520 | Msa0223230 | 0.830267 | 3.234179e-55 | -8.615850e-47 |
| Msa0093850 | Msa0223230 | 0.860665 | 1.762961e-63 | -8.615850e-47 |
| Msa0098470 | Msa0223230 | 0.825937 | 3.569794e-54 | -8.615850e-47 |
| Msa0103250 | Msa0223230 | 0.819262 | 1.273837e-52 | -8.615850e-47 |
| Msa0106320 | Msa0223230 | 0.836866 | 7.277957e-57 | -8.615850e-47 |
| Msa0106620 | Msa0223230 | 0.844677 | 6.517298e-59 | -8.615850e-47 |
| Msa0106710 | Msa0223230 | 0.836520 | 8.918686e-57 | -8.615850e-47 |
| Msa0123510 | Msa0223230 | 0.810859 | 9.349565e-51 | -8.615850e-47 |
| Msa0124450 | Msa0223230 | 0.833340 | 5.642159e-56 | -8.615850e-47 |
| Msa0127100 | Msa0223230 | 0.822954 | 1.796286e-53 | -8.615850e-47 |
| Msa0127850 | Msa0223230 | 0.828195 | 1.028918e-54 | -8.615850e-47 |
| Msa0131330 | Msa0223230 | 0.823021 | 1.733181e-53 | -8.615850e-47 |
| Msa0133720 | Msa0223230 | 0.816495 | 5.370669e-52 | -8.615850e-47 |
| Msa0136120 | Msa0223230 | 0.812294 | 4.557181e-51 | -8.615850e-47 |
| Msa0137990 | Msa0223230 | 0.831644 | 1.484854e-55 | -8.615850e-47 |
| Msa0138360 | Msa0223230 | 0.811927 | 5.481402e-51 | -8.615850e-47 |
| Msa0147980 | Msa0223230 | 0.821103 | 4.823763e-53 | -8.615850e-47 |
| Msa0152870 | Msa0223230 | 0.828904 | 6.935911e-55 | -8.615850e-47 |
| Msa0166460 | Msa0223230 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0173890 | Msa0223230 | 0.830026 | 3.702295e-55 | -8.615850e-47 |
| Msa0174000 | Msa0223230 | 0.806149 | 9.461981e-50 | -8.615850e-47 |
| Msa0177210 | Msa0223230 | 0.815527 | 8.830869e-52 | -8.615850e-47 |
| Msa0178120 | Msa0223230 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0181230 | Msa0223230 | 0.824408 | 8.201946e-54 | -8.615850e-47 |
| Msa0183900 | Msa0223230 | 0.828156 | 1.051577e-54 | -8.615850e-47 |
| Msa0192480 | Msa0223230 | 0.989894 | 4.000600e-180 | -8.615850e-47 |
| Msa0197520 | Msa0223230 | 0.808512 | 2.985858e-50 | -8.615850e-47 |
| Msa0198800 | Msa0223230 | 0.808560 | 2.916895e-50 | -8.615850e-47 |
| Msa0199940 | Msa0223230 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa0205010 | Msa0223230 | 0.813922 | 2.003216e-51 | -8.615850e-47 |
| Msa0206000 | Msa0223230 | 0.814438 | 1.540689e-51 | -8.615850e-47 |
| Msa0207350 | Msa0223230 | 0.803722 | 3.043706e-49 | -8.615850e-47 |
| Msa0217700 | Msa0223230 | 0.811001 | 8.708023e-51 | -8.615850e-47 |
| Msa0221000 | Msa0223230 | 0.834331 | 3.187649e-56 | -8.615850e-47 |
| Msa0223230 | Msa0225220 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0223230 | Msa0237210 | 0.812245 | 4.671083e-51 | -8.615850e-47 |
| Msa0223230 | Msa0240900 | 0.814714 | 1.338658e-51 | -8.615850e-47 |
| Msa0223230 | Msa0241630 | 0.850210 | 1.967355e-60 | -8.615850e-47 |
| Msa0223230 | Msa0241830 | 0.829545 | 4.848135e-55 | -8.615850e-47 |
| Msa0223230 | Msa0244980 | 0.809134 | 2.198235e-50 | -8.615850e-47 |
| Msa0223230 | Msa0249540 | 0.812697 | 3.720482e-51 | -8.615850e-47 |
| Msa0223230 | Msa0249580 | 0.825768 | 3.915749e-54 | -8.615850e-47 |
| Msa0223230 | Msa0257520 | 0.803881 | 2.821583e-49 | -8.615850e-47 |
| Msa0223230 | Msa0261170 | 0.809225 | 2.102042e-50 | -8.615850e-47 |
| Msa0223230 | Msa0274980 | 0.824645 | 7.216556e-54 | -8.615850e-47 |
| Msa0223230 | Msa0277450 | 0.812012 | 5.251217e-51 | -8.615850e-47 |
| Msa0223230 | Msa0279850 | 0.835740 | 1.406966e-56 | -8.615850e-47 |
| Msa0223230 | Msa0281470 | 0.802880 | 4.547840e-49 | -8.615850e-47 |
| Msa0223230 | Msa0296250 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0223230 | Msa0300270 | 0.825833 | 3.778658e-54 | -8.615850e-47 |
| Msa0223230 | Msa0300320 | 0.843789 | 1.128574e-58 | -8.615850e-47 |
| Msa0223230 | Msa0305780 | 0.823059 | 1.698257e-53 | -8.615850e-47 |
| Msa0223230 | Msa0307270 | 0.816888 | 4.383321e-52 | -8.615850e-47 |
| Msa0223230 | Msa0315690 | 0.822480 | 2.316734e-53 | -8.615850e-47 |
| Msa0223230 | Msa0317970 | 0.826705 | 2.342778e-54 | -8.615850e-47 |
| Msa0223230 | Msa0322240 | 0.811520 | 6.720408e-51 | -8.615850e-47 |
| Msa0223230 | Msa0322560 | 0.833065 | 6.605551e-56 | -8.615850e-47 |
| Msa0223230 | Msa0322900 | 0.838965 | 2.102155e-57 | -8.615850e-47 |
| Msa0223230 | Msa0326120 | 0.800243 | 1.579484e-48 | -8.615850e-47 |
| Msa0223230 | Msa0326590 | 0.834265 | 3.313034e-56 | -8.615850e-47 |
| Msa0223230 | Msa0337700 | 0.831438 | 1.669607e-55 | -8.615850e-47 |
| Msa0223230 | Msa0341690 | 0.874620 | 5.858589e-68 | -8.615850e-47 |
| Msa0223230 | Msa0342010 | 0.825939 | 3.565039e-54 | -8.615850e-47 |
| Msa0223230 | Msa0357900 | 0.808260 | 3.379490e-50 | -8.615850e-47 |
| Msa0223230 | Msa0358890 | 0.803213 | 3.880259e-49 | -8.615850e-47 |
| Msa0223230 | Msa0372810 | 0.807890 | 4.052518e-50 | -8.615850e-47 |
| Msa0223230 | Msa0378720 | 0.810582 | 1.072920e-50 | -8.615850e-47 |
| Msa0223230 | Msa0378970 | 0.828048 | 1.116545e-54 | -8.615850e-47 |
| Msa0223230 | Msa0406770 | 0.802049 | 6.746995e-49 | -8.615850e-47 |
| Msa0223230 | Msa0419720 | 0.836113 | 1.131876e-56 | -8.615850e-47 |
| Msa0223230 | Msa0428580 | 0.826325 | 2.886753e-54 | -8.615850e-47 |
| Msa0223230 | Msa0435370 | 0.803862 | 2.846399e-49 | -8.615850e-47 |
| Msa0223230 | Msa0451070 | 0.805406 | 1.355966e-49 | -8.615850e-47 |
| Msa0223230 | Msa0474940 | 0.806993 | 6.279121e-50 | -8.615850e-47 |
| Msa0223230 | Msa0479200 | 0.828524 | 8.571887e-55 | -8.615850e-47 |
| Msa0223230 | Msa0480780 | 0.803719 | 3.048677e-49 | -8.615850e-47 |
| Msa0223230 | Msa0485240 | 0.801520 | 8.663608e-49 | -8.615850e-47 |
| Msa0223230 | Msa0511770 | 0.802058 | 6.715681e-49 | -8.615850e-47 |
| Msa0223230 | Msa0518030 | 0.844842 | 5.882984e-59 | -8.615850e-47 |
| Msa0223230 | Msa0527020 | 0.815763 | 7.825976e-52 | -8.615850e-47 |
| Msa0223230 | Msa0527190 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0223230 | Msa0531250 | 0.825685 | 4.096798e-54 | -8.615850e-47 |
| Msa0223230 | Msa0531650 | 0.809040 | 2.303060e-50 | -8.615850e-47 |
| Msa0223230 | Msa0532980 | 0.841413 | 4.824437e-58 | -8.615850e-47 |
| Msa0223230 | Msa0547990 | 0.846936 | 1.588043e-59 | -8.615850e-47 |
| Msa0223230 | Msa0556010 | 0.811073 | 8.402729e-51 | -8.615850e-47 |
| Msa0223230 | Msa0560500 | 0.811529 | 6.690828e-51 | -8.615850e-47 |
| Msa0223230 | Msa0576680 | 0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa0223230 | Msa0581690 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
| Msa0223230 | Msa0582480 | 0.816428 | 5.557396e-52 | -8.615850e-47 |
| Msa0223230 | Msa0583500 | 0.824367 | 8.385833e-54 | -8.615850e-47 |
| Msa0223230 | Msa0584550 | 0.811369 | 7.247988e-51 | -8.615850e-47 |
| Msa0223230 | Msa0588090 | 0.840929 | 6.465007e-58 | -8.615850e-47 |
| Msa0223230 | Msa0593700 | 0.809066 | 2.273221e-50 | -8.615850e-47 |
| Msa0223230 | Msa0610250 | 0.805610 | 1.228245e-49 | -8.615850e-47 |
| Msa0223230 | Msa0618950 | 0.811089 | 8.334353e-51 | -8.615850e-47 |
| Msa0223230 | Msa0628420 | 0.838208 | 3.297000e-57 | -8.615850e-47 |
| Msa0223230 | Msa0638480 | 0.805269 | 1.447964e-49 | -8.615850e-47 |
| Msa0223230 | Msa0644030 | 0.832611 | 8.565867e-56 | -8.615850e-47 |
| Msa0223230 | Msa0658040 | 0.816418 | 5.587926e-52 | -8.615850e-47 |
| Msa0223230 | Msa0658590 | 0.824923 | 6.203552e-54 | -8.615850e-47 |
| Msa0223230 | Msa0666230 | 0.808201 | 3.479089e-50 | -8.615850e-47 |
| Msa0223230 | Msa0667770 | 0.813723 | 2.216000e-51 | -8.615850e-47 |
| Msa0223230 | Msa0667790 | 0.826258 | 2.994337e-54 | -8.615850e-47 |
| Msa0223230 | Msa0673270 | 0.801437 | 9.009935e-49 | -8.615850e-47 |
| Msa0223230 | Msa0704890 | 0.802661 | 5.045566e-49 | -8.615850e-47 |
| Msa0223230 | Msa0710270 | 0.801518 | 8.671317e-49 | -8.615850e-47 |
| Msa0223230 | Msa0712560 | 0.801947 | 7.080729e-49 | -8.615850e-47 |
| Msa0223230 | Msa0744100 | 0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa0223230 | Msa0780930 | 0.831967 | 1.236166e-55 | -8.615850e-47 |
| Msa0223230 | Msa0797930 | 0.823145 | 1.621899e-53 | -8.615850e-47 |
| Msa0223230 | Msa0810030 | 0.806348 | 8.591916e-50 | -8.615850e-47 |
| Msa0223230 | Msa0819540 | 0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0223230 | Msa0822500 | 0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa0223230 | Msa0825270 | 0.805032 | 1.623306e-49 | -8.615850e-47 |
| Msa0223230 | Msa0832120 | 0.802060 | 6.711701e-49 | -8.615850e-47 |
| Msa0223230 | Msa0849440 | 0.820018 | 8.562601e-53 | -8.615850e-47 |
| Msa0223230 | Msa0861510 | 0.806588 | 7.648823e-50 | -8.615850e-47 |
| Msa0223230 | Msa0861600 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0223230 | Msa0865030 | 0.807706 | 4.433760e-50 | -8.615850e-47 |
| Msa0223230 | Msa0906780 | 0.805406 | 1.355433e-49 | -8.615850e-47 |
| Msa0223230 | Msa0934140 | 0.804449 | 2.149260e-49 | -8.615850e-47 |
| Msa0223230 | Msa0940580 | 0.800965 | 1.125160e-48 | -8.615850e-47 |
| Msa0223230 | Msa0944200 | 0.808746 | 2.661247e-50 | -8.615850e-47 |
| Msa0223230 | Msa0944660 | 0.806750 | 7.067853e-50 | -8.615850e-47 |
| Msa0223230 | Msa0945240 | 0.804951 | 1.688364e-49 | -8.615850e-47 |
| Msa0223230 | Msa0962070 | 0.805787 | 1.127573e-49 | -8.615850e-47 |
| Msa0223230 | Msa0997430 | 0.838321 | 3.082577e-57 | -8.615850e-47 |
| Msa0223230 | Msa1004890 | 0.804468 | 2.129229e-49 | -8.615850e-47 |
| Msa0223230 | Msa1006840 | 0.817370 | 3.416049e-52 | -8.615850e-47 |
| Msa0223230 | Msa1012740 | 0.839646 | 1.399122e-57 | -8.615850e-47 |
| Msa0223230 | Msa1028590 | 0.803375 | 3.593047e-49 | -8.615850e-47 |
| Msa0223230 | Msa1034500 | 0.815394 | 9.456045e-52 | -8.615850e-47 |
| Msa0223230 | Msa1034720 | 0.801714 | 7.905351e-49 | -8.615850e-47 |
| Msa0223230 | Msa1034860 | 0.812051 | 5.148692e-51 | -8.615850e-47 |
| Msa0223230 | Msa1040840 | 0.848305 | 6.672100e-60 | -8.615850e-47 |
| Msa0223230 | Msa1071050 | 0.825506 | 4.516167e-54 | -8.615850e-47 |
| Msa0223230 | Msa1073490 | 0.804725 | 1.881730e-49 | -8.615850e-47 |
| Msa0223230 | Msa1076560 | 0.824326 | 8.576671e-54 | -8.615850e-47 |
| Msa0223230 | Msa1079230 | 0.837196 | 5.994087e-57 | -8.615850e-47 |
| Msa0223230 | Msa1080640 | 0.831271 | 1.835339e-55 | -8.615850e-47 |
| Msa0223230 | Msa1080960 | 0.814191 | 1.746880e-51 | -8.615850e-47 |
| Msa0223230 | Msa1082690 | 0.810454 | 1.143379e-50 | -8.615850e-47 |
| Msa0223230 | Msa1089450 | 0.829653 | 4.562813e-55 | -8.615850e-47 |
| Msa0223230 | Msa1118450 | 0.830900 | 2.262811e-55 | -8.615850e-47 |
| Msa0223230 | Msa1119090 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0223230 | Msa1119190 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0223230 | Msa1123350 | 0.814587 | 1.428353e-51 | -8.615850e-47 |
| Msa0223230 | Msa1124110 | 0.806631 | 7.489964e-50 | -8.615850e-47 |
| Msa0223230 | Msa1126450 | 0.814053 | 1.873726e-51 | -8.615850e-47 |
| Msa0223230 | Msa1127590 | 0.827108 | 1.876749e-54 | -8.615850e-47 |
| Msa0223230 | Msa1132480 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
| Msa0223230 | Msa1135890 | 0.840666 | 7.578433e-58 | -8.615850e-47 |
| Msa0223230 | Msa1145240 | 0.964138 | 5.962436e-123 | -8.615850e-47 |
| Msa0223230 | Msa1145810 | 0.830826 | 2.359772e-55 | -8.615850e-47 |
| Msa0223230 | Msa1168950 | 0.812272 | 4.607833e-51 | -8.615850e-47 |
| Msa0223230 | Msa1169040 | 0.820937 | 5.267992e-53 | -8.615850e-47 |
| Msa0223230 | Msa1179630 | 0.825306 | 5.037738e-54 | -8.615850e-47 |
| Msa0223230 | Msa1206090 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
| Msa0223230 | Msa1206230 | 0.827252 | 1.733675e-54 | -8.615850e-47 |
| Msa0223230 | Msa1206850 | 0.801202 | 1.006224e-48 | -8.615850e-47 |
| Msa0223230 | Msa1218450 | 0.814203 | 1.736388e-51 | -8.615850e-47 |
| Msa0223230 | Msa1219000 | 0.852628 | 4.073958e-61 | -8.615850e-47 |
| Msa0223230 | Msa1225660 | 0.807146 | 5.829669e-50 | -8.615850e-47 |
| Msa0223230 | Msa1226470 | 0.827191 | 1.792445e-54 | -8.615850e-47 |
| Msa0223230 | Msa1256850 | 0.814999 | 1.157410e-51 | -8.615850e-47 |
| Msa0223230 | Msa1262890 | 0.818600 | 1.800793e-52 | -8.615850e-47 |
| Msa0223230 | Msa1275590 | 0.804529 | 2.067987e-49 | -8.615850e-47 |
| Msa0223230 | Msa1276660 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0223230 | Msa1297970 | 0.833023 | 6.767166e-56 | -8.615850e-47 |
| Msa0223230 | Msa1307180 | 0.804802 | 1.813740e-49 | -8.615850e-47 |
| Msa0223230 | Msa1307560 | 0.803030 | 4.234784e-49 | -8.615850e-47 |
| Msa0223230 | Msa1315750 | 0.825468 | 4.610843e-54 | -8.615850e-47 |
| Msa0223230 | Msa1329540 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa0223230 | Msa1330270 | 0.805298 | 1.428153e-49 | -8.615850e-47 |
| Msa0223230 | Msa1332760 | 0.862124 | 6.326539e-64 | -8.615850e-47 |
| Msa0223230 | Msa1348090 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa0223230 | Msa1349520 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa0223230 | Msa1358480 | 0.820672 | 6.060187e-53 | -8.615850e-47 |
| Msa0223230 | Msa1360980 | 0.840358 | 9.126773e-58 | -8.615850e-47 |
| Msa0223230 | Msa1369150 | 0.813201 | 2.885343e-51 | -8.615850e-47 |
| Msa0223230 | Msa1369890 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0223230 | Msa1373820 | 0.818483 | 1.914357e-52 | -8.615850e-47 |
| Msa0223230 | Msa1380400 | 0.801044 | 1.084297e-48 | -8.615850e-47 |
| Msa0223230 | Msa1383530 | 0.812401 | 4.319389e-51 | -8.615850e-47 |
| Msa0223230 | Msa1386710 | 0.802607 | 5.178544e-49 | -8.615850e-47 |
| Msa0223230 | Msa1407190 | 0.813745 | 2.191089e-51 | -8.615850e-47 |
| Msa0223230 | Msa1411950 | 0.822170 | 2.734025e-53 | -8.615850e-47 |
| Msa0223230 | Msa1413180 | 0.829409 | 5.231535e-55 | -8.615850e-47 |
| Msa0223230 | Msa1418240 | 0.803685 | 3.098627e-49 | -8.615850e-47 |
| Msa0223230 | Msa1421560 | 0.806619 | 7.532662e-50 | -8.615850e-47 |
| Msa0223230 | Msa1425880 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0223230 | Msa1429500 | 0.821997 | 2.997771e-53 | -8.615850e-47 |
| Msa0223230 | Msa1432130 | 0.815554 | 8.711950e-52 | -8.615850e-47 |
| Msa0223230 | Msa1440310 | 0.839155 | 1.876714e-57 | -8.615850e-47 |
| Msa0223230 | Msa1447180 | 0.812365 | 4.398415e-51 | -8.615850e-47 |
| Msa0223230 | Msa1463900 | 0.814578 | 1.434785e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223230 | MtrunA17_Chr2g0282661 | 98.684 | 152 | 2 | 0 | 1 | 152 | 1 | 152 | 2.31e-109 | 307 |
| Msa0223230 | MtrunA17_Chr2g0324821 | 66.667 | 144 | 40 | 2 | 12 | 152 | 2 | 140 | 3.33e-65 | 195 |
| Msa0223230 | MtrunA17_Chr5g0413571 | 65.217 | 138 | 42 | 2 | 13 | 150 | 4 | 135 | 3.93e-60 | 182 |
| Msa0223230 | MtrunA17_Chr8g0365411 | 54.348 | 138 | 24 | 1 | 14 | 151 | 5 | 103 | 3.06e-46 | 146 |
| Msa0223230 | MtrunA17_Chr6g0476691 | 60.000 | 105 | 35 | 1 | 47 | 151 | 2 | 99 | 2.23e-38 | 126 |
| Msa0223230 | MtrunA17_Chr5g0438061 | 38.462 | 130 | 65 | 2 | 20 | 148 | 103 | 218 | 1.42e-20 | 84.0 |
| Msa0223230 | MtrunA17_Chr5g0438041 | 39.259 | 135 | 63 | 4 | 20 | 149 | 5 | 125 | 1.78e-20 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223230 | AT2G33845.1 | 68.382 | 136 | 38 | 1 | 17 | 152 | 52 | 182 | 1.95e-64 | 195 |
| Msa0223230 | AT1G23750.1 | 63.121 | 141 | 46 | 1 | 11 | 151 | 3 | 137 | 6.09e-63 | 189 |
| Msa0223230 | AT4G28440.1 | 65.152 | 132 | 46 | 0 | 17 | 148 | 17 | 148 | 2.56e-59 | 181 |
| Msa0223230 | AT1G10590.2 | 61.940 | 134 | 46 | 3 | 16 | 148 | 7 | 136 | 2.22e-56 | 173 |
| Msa0223230 | AT1G10590.1 | 61.940 | 134 | 46 | 3 | 16 | 148 | 7 | 136 | 2.22e-56 | 173 |
| Msa0223230 | AT1G10590.3 | 61.940 | 134 | 46 | 3 | 16 | 148 | 21 | 150 | 3.61e-56 | 173 |
| Msa0223230 | AT1G03810.1 | 60.902 | 133 | 49 | 1 | 17 | 149 | 14 | 143 | 3.20e-54 | 168 |
| Msa0223230 | AT1G23750.2 | 68.571 | 105 | 27 | 1 | 47 | 151 | 2 | 100 | 1.34e-47 | 149 |
Find 37 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAGATTGACATGTTTA+AGG | 0.167888 | 2_1:+72786192 | Msa0223230:CDS |
| AGACAATGGACTATAAAATT+TGG | 0.261459 | 2_1:-72786580 | None:intergenic |
| TCCGAAACTGTTCTGCAAAA+AGG | 0.301507 | 2_1:+72784920 | Msa0223230:CDS |
| ATGAAGTCAAGCATGTTAAA+AGG | 0.324760 | 2_1:-72786440 | None:intergenic |
| AAAGTGTGTCCGTTTGTTCC+TGG | 0.370124 | 2_1:-72784878 | None:intergenic |
| GCAAAGATTGACATGTTTAA+GGG | 0.371017 | 2_1:+72786193 | Msa0223230:CDS |
| ATCTCTCATTGAATATGAAT+TGG | 0.375517 | 2_1:+72786300 | Msa0223230:CDS |
| ATTCATATTCAATGAGAGAT+AGG | 0.377306 | 2_1:-72786297 | None:intergenic |
| TGAGGCTGGCCGTTGACAAA+TGG | 0.402663 | 2_1:+72786221 | Msa0223230:CDS |
| GAGGCTGGCCGTTGACAAAT+GGG | 0.404101 | 2_1:+72786222 | Msa0223230:CDS |
| CTGATATGGCAAAACTTAAC+TGG | 0.406337 | 2_1:+72786383 | Msa0223230:three_prime_UTR |
| TGCAGAGTTCGTTGTTAAAG+AGG | 0.437457 | 2_1:+72786267 | Msa0223230:CDS |
| AATGTTGTTTCACATGAAGA+TGG | 0.450601 | 2_1:+72784803 | Msa0223230:CDS |
| AAAACCCACTTTCACAAAAG+TGG | 0.453220 | 2_1:+72784844 | Msa0223230:CDS |
| CATTGCAGTTGAGCTTATGA+AGG | 0.477921 | 2_1:+72786144 | Msa0223230:intron |
| AGAGTAATTCATAGTTAAAG+AGG | 0.491467 | 2_1:+72786336 | Msa0223230:exon |
| TCTTTAACAACGAACTCTGC+AGG | 0.492103 | 2_1:-72786265 | None:intergenic |
| GCAGTTGAGCTTATGAAGGC+TGG | 0.493996 | 2_1:+72786148 | Msa0223230:intron |
| TGTCTCATCGGTGATGAAAC+TGG | 0.501588 | 2_1:+72785004 | Msa0223230:CDS |
| TATCAGCACAAACAAAAGAT+AGG | 0.506308 | 2_1:-72786366 | None:intergenic |
| CAGATGAAACCAGGAACAAA+CGG | 0.508711 | 2_1:+72784869 | Msa0223230:CDS |
| CGGACACACTTTGATTGCTA+AGG | 0.513860 | 2_1:+72784889 | Msa0223230:CDS |
| TGCTTATAATTGCAAGACAA+TGG | 0.553952 | 2_1:-72786594 | None:intergenic |
| CTTATCTCTGAGTGTCTCAT+CGG | 0.563970 | 2_1:+72784992 | Msa0223230:CDS |
| TTCACCGCTCGCAATGAACA+AGG | 0.567422 | 2_1:+72785037 | Msa0223230:CDS |
| ATTGCGAGCGGTGAAAATGA+TGG | 0.574482 | 2_1:-72785029 | None:intergenic |
| GTTTAAGGGATCAATGAGGC+TGG | 0.582292 | 2_1:+72786207 | Msa0223230:CDS |
| GGCTGGCCGTTGACAAATGG+GGG | 0.597410 | 2_1:+72786224 | Msa0223230:CDS |
| AGACACTCAGAGATAAGAGT+AGG | 0.601286 | 2_1:-72784986 | None:intergenic |
| CTTTAACAACGAACTCTGCA+GGG | 0.601895 | 2_1:-72786264 | None:intergenic |
| GAGTAATTCATAGTTAAAGA+GGG | 0.610715 | 2_1:+72786337 | Msa0223230:exon |
| ATACCACGAGAAGATGAAGA+AGG | 0.617287 | 2_1:-72784956 | None:intergenic |
| AGAACCTTGTTCATTGCGAG+CGG | 0.622173 | 2_1:-72785041 | None:intergenic |
| AGACCTTCTTCATCTTCTCG+TGG | 0.632890 | 2_1:+72784953 | Msa0223230:CDS |
| AGGCTGGCCGTTGACAAATG+GGG | 0.640279 | 2_1:+72786223 | Msa0223230:CDS |
| AAAGTGGATCAGATGAAACC+AGG | 0.663122 | 2_1:+72784860 | Msa0223230:CDS |
| ACATGTTTAAGGGATCAATG+AGG | 0.703797 | 2_1:+72786203 | Msa0223230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTCTTCTTCATT+TGG | + | chr2_1:72785152-72785171 | Msa0223230:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTCATTT+GGG | + | chr2_1:72785153-72785172 | Msa0223230:intron | 15.0% |
| !!! | TAAGATATGTTTTTATTGAT+TGG | + | chr2_1:72786061-72786080 | Msa0223230:intron | 15.0% |
| !!! | ATTTTTTTTTCTTCTTCATT+TGG | + | chr2_1:72785152-72785171 | Msa0223230:intron | 15.0% |
| !!! | TTTTTTTTTCTTCTTCATTT+GGG | + | chr2_1:72785153-72785172 | Msa0223230:intron | 15.0% |
| !!! | TAAGATATGTTTTTATTGAT+TGG | + | chr2_1:72786061-72786080 | Msa0223230:intron | 15.0% |
| !! | AAAACTGAAAAACAAAACAA+TGG | + | chr2_1:72784772-72784791 | Msa0223230:exon | 20.0% |
| !!! | CAGTTATCATTTTTAAGAAT+GGG | - | chr2_1:72785097-72785116 | None:intergenic | 20.0% |
| !!! | ACAGTTATCATTTTTAAGAA+TGG | - | chr2_1:72785098-72785117 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTCATTTG+GGG | + | chr2_1:72785154-72785173 | Msa0223230:intron | 20.0% |
| !!! | ATGAACACTAATTTAGATTT+TGG | - | chr2_1:72785230-72785249 | None:intergenic | 20.0% |
| !! | AATCTAAATTAGTGTTCATA+AGG | + | chr2_1:72785231-72785250 | Msa0223230:intron | 20.0% |
| !! | ATAAAAATGCTGATAAAAAG+GGG | - | chr2_1:72785354-72785373 | None:intergenic | 20.0% |
| !! | CATAAAAATGCTGATAAAAA+GGG | - | chr2_1:72785355-72785374 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGAGTTTAGAG+AGG | + | chr2_1:72785460-72785479 | Msa0223230:intron | 20.0% |
| !! | TTATGAAACTTATGATTCAT+TGG | + | chr2_1:72785509-72785528 | Msa0223230:intron | 20.0% |
| !!! | GTTTTTATTGATTGGATATT+AGG | + | chr2_1:72786069-72786088 | Msa0223230:intron | 20.0% |
| !! | AAAACTGAAAAACAAAACAA+TGG | + | chr2_1:72784772-72784791 | Msa0223230:exon | 20.0% |
| !!! | CAGTTATCATTTTTAAGAAT+GGG | - | chr2_1:72785097-72785116 | None:intergenic | 20.0% |
| !!! | ACAGTTATCATTTTTAAGAA+TGG | - | chr2_1:72785098-72785117 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTCATTTG+GGG | + | chr2_1:72785154-72785173 | Msa0223230:intron | 20.0% |
| !!! | ATGAACACTAATTTAGATTT+TGG | - | chr2_1:72785230-72785249 | None:intergenic | 20.0% |
| !! | AATCTAAATTAGTGTTCATA+AGG | + | chr2_1:72785231-72785250 | Msa0223230:intron | 20.0% |
| !! | ATAAAAATGCTGATAAAAAG+GGG | - | chr2_1:72785354-72785373 | None:intergenic | 20.0% |
| !! | CATAAAAATGCTGATAAAAA+GGG | - | chr2_1:72785355-72785374 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGAGTTTAGAG+AGG | + | chr2_1:72785460-72785479 | Msa0223230:intron | 20.0% |
| !! | TTATGAAACTTATGATTCAT+TGG | + | chr2_1:72785509-72785528 | Msa0223230:intron | 20.0% |
| !!! | GTTTTTATTGATTGGATATT+AGG | + | chr2_1:72786069-72786088 | Msa0223230:intron | 20.0% |
| !!! | GATCTACATTTTTTGAGATT+AGG | + | chr2_1:72785189-72785208 | Msa0223230:intron | 25.0% |
| ! | GCATAAAAATGCTGATAAAA+AGG | - | chr2_1:72785356-72785375 | None:intergenic | 25.0% |
| !!! | ATTTTTAGCTCTTTATGTAC+TGG | + | chr2_1:72785405-72785424 | Msa0223230:intron | 25.0% |
| ! | CAATATAGAAAGAAATAGTC+AGG | - | chr2_1:72785440-72785459 | None:intergenic | 25.0% |
| !! | AAACTTATGATTCATTGGTT+GGG | + | chr2_1:72785514-72785533 | Msa0223230:intron | 25.0% |
| ! | CTTATTTCCATAACATCTAT+AGG | + | chr2_1:72785764-72785783 | Msa0223230:intron | 25.0% |
| ! | TCTACAACATGGTAATATAA+AGG | - | chr2_1:72785832-72785851 | None:intergenic | 25.0% |
| !!! | AATAAGCTATTTCTACAACA+TGG | - | chr2_1:72785843-72785862 | None:intergenic | 25.0% |
| ! | TTATAGTATAACCATGTAAG+TGG | - | chr2_1:72785876-72785895 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAGT+AGG | + | chr2_1:72785903-72785922 | Msa0223230:intron | 25.0% |
| !!! | TTGTAGTTTATTTTCTTCGT+GGG | + | chr2_1:72785927-72785946 | Msa0223230:intron | 25.0% |
| !! | ACATCAATAGTTTCTTTTAG+TGG | + | chr2_1:72786030-72786049 | Msa0223230:intron | 25.0% |
| ! | TATTAGGACTAATCAGTATA+AGG | + | chr2_1:72786085-72786104 | Msa0223230:intron | 25.0% |
| ! | ATTCATATTCAATGAGAGAT+AGG | - | chr2_1:72786300-72786319 | None:intergenic | 25.0% |
| ! | ATCTCTCATTGAATATGAAT+TGG | + | chr2_1:72786300-72786319 | Msa0223230:CDS | 25.0% |
| ! | AGAGTAATTCATAGTTAAAG+AGG | + | chr2_1:72786336-72786355 | Msa0223230:exon | 25.0% |
| ! | GAGTAATTCATAGTTAAAGA+GGG | + | chr2_1:72786337-72786356 | Msa0223230:exon | 25.0% |
| !! | CATTTTCACTTTAATTAGAC+TGG | + | chr2_1:72786412-72786431 | Msa0223230:three_prime_UTR | 25.0% |
| !!! | AGACAATGGACTATAAAATT+TGG | - | chr2_1:72786583-72786602 | None:intergenic | 25.0% |
| !!! | GATCTACATTTTTTGAGATT+AGG | + | chr2_1:72785189-72785208 | Msa0223230:intron | 25.0% |
| ! | GCATAAAAATGCTGATAAAA+AGG | - | chr2_1:72785356-72785375 | None:intergenic | 25.0% |
| !!! | ATTTTTAGCTCTTTATGTAC+TGG | + | chr2_1:72785405-72785424 | Msa0223230:intron | 25.0% |
| ! | CAATATAGAAAGAAATAGTC+AGG | - | chr2_1:72785440-72785459 | None:intergenic | 25.0% |
| !! | AAACTTATGATTCATTGGTT+GGG | + | chr2_1:72785514-72785533 | Msa0223230:intron | 25.0% |
| ! | CTTATTTCCATAACATCTAT+AGG | + | chr2_1:72785764-72785783 | Msa0223230:intron | 25.0% |
| ! | TCTACAACATGGTAATATAA+AGG | - | chr2_1:72785832-72785851 | None:intergenic | 25.0% |
| !!! | AATAAGCTATTTCTACAACA+TGG | - | chr2_1:72785843-72785862 | None:intergenic | 25.0% |
| ! | TTATAGTATAACCATGTAAG+TGG | - | chr2_1:72785876-72785895 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAGT+AGG | + | chr2_1:72785903-72785922 | Msa0223230:intron | 25.0% |
| !!! | TTGTAGTTTATTTTCTTCGT+GGG | + | chr2_1:72785927-72785946 | Msa0223230:intron | 25.0% |
| !! | ACATCAATAGTTTCTTTTAG+TGG | + | chr2_1:72786030-72786049 | Msa0223230:intron | 25.0% |
| ! | TATTAGGACTAATCAGTATA+AGG | + | chr2_1:72786085-72786104 | Msa0223230:intron | 25.0% |
| ! | ATTCATATTCAATGAGAGAT+AGG | - | chr2_1:72786300-72786319 | None:intergenic | 25.0% |
| ! | ATCTCTCATTGAATATGAAT+TGG | + | chr2_1:72786300-72786319 | Msa0223230:CDS | 25.0% |
| ! | AGAGTAATTCATAGTTAAAG+AGG | + | chr2_1:72786336-72786355 | Msa0223230:exon | 25.0% |
| ! | GAGTAATTCATAGTTAAAGA+GGG | + | chr2_1:72786337-72786356 | Msa0223230:exon | 25.0% |
| !! | CATTTTCACTTTAATTAGAC+TGG | + | chr2_1:72786412-72786431 | Msa0223230:three_prime_UTR | 25.0% |
| !!! | AGACAATGGACTATAAAATT+TGG | - | chr2_1:72786583-72786602 | None:intergenic | 25.0% |
| !! | AATGTTGTTTCACATGAAGA+TGG | + | chr2_1:72784803-72784822 | Msa0223230:CDS | 30.0% |
| AAAAATGATAACTGTTCTCG+TGG | + | chr2_1:72785103-72785122 | Msa0223230:intron | 30.0% | |
| AAAATGATAACTGTTCTCGT+GGG | + | chr2_1:72785104-72785123 | Msa0223230:intron | 30.0% | |
| GGGGATCTAAAAATAAACAT+TGG | - | chr2_1:72785335-72785354 | None:intergenic | 30.0% | |
| TATTAAGAGTTTAGAGAGGA+AGG | + | chr2_1:72785464-72785483 | Msa0223230:intron | 30.0% | |
| GAAACTTATGATTCATTGGT+TGG | + | chr2_1:72785513-72785532 | Msa0223230:intron | 30.0% | |
| TAAACACTTGTGACACTATT+TGG | + | chr2_1:72785694-72785713 | Msa0223230:intron | 30.0% | |
| AAACACTTGTGACACTATTT+GGG | + | chr2_1:72785695-72785714 | Msa0223230:intron | 30.0% | |
| AAGCTATCCTATAGATGTTA+TGG | - | chr2_1:72785774-72785793 | None:intergenic | 30.0% | |
| AAATAAACTACAAGCCTACT+TGG | - | chr2_1:72785920-72785939 | None:intergenic | 30.0% | |
| !! | CTTGTAGTTTATTTTCTTCG+TGG | + | chr2_1:72785926-72785945 | Msa0223230:intron | 30.0% |
| !! | TGTAGTTTATTTTCTTCGTG+GGG | + | chr2_1:72785928-72785947 | Msa0223230:intron | 30.0% |
| AAGAAACTATTGATGTTGCA+GGG | - | chr2_1:72786026-72786045 | None:intergenic | 30.0% | |
| AAAGAAACTATTGATGTTGC+AGG | - | chr2_1:72786027-72786046 | None:intergenic | 30.0% | |
| TGCAAAGATTGACATGTTTA+AGG | + | chr2_1:72786192-72786211 | Msa0223230:CDS | 30.0% | |
| GCAAAGATTGACATGTTTAA+GGG | + | chr2_1:72786193-72786212 | Msa0223230:CDS | 30.0% | |
| TATCAGCACAAACAAAAGAT+AGG | - | chr2_1:72786369-72786388 | None:intergenic | 30.0% | |
| !! | ATCTTTTGTTTGTGCTGATA+TGG | + | chr2_1:72786369-72786388 | Msa0223230:three_prime_UTR | 30.0% |
| ATGAAGTCAAGCATGTTAAA+AGG | - | chr2_1:72786443-72786462 | None:intergenic | 30.0% | |
| ! | AACATGCTTGACTTCATTTT+AGG | + | chr2_1:72786446-72786465 | Msa0223230:three_prime_UTR | 30.0% |
| ! | CACTATCATATTTTCTCAAG+TGG | - | chr2_1:72786532-72786551 | None:intergenic | 30.0% |
| !! | AATGTTGTTTCACATGAAGA+TGG | + | chr2_1:72784803-72784822 | Msa0223230:CDS | 30.0% |
| AAAAATGATAACTGTTCTCG+TGG | + | chr2_1:72785103-72785122 | Msa0223230:intron | 30.0% | |
| AAAATGATAACTGTTCTCGT+GGG | + | chr2_1:72785104-72785123 | Msa0223230:intron | 30.0% | |
| GGGGATCTAAAAATAAACAT+TGG | - | chr2_1:72785335-72785354 | None:intergenic | 30.0% | |
| TATTAAGAGTTTAGAGAGGA+AGG | + | chr2_1:72785464-72785483 | Msa0223230:intron | 30.0% | |
| GAAACTTATGATTCATTGGT+TGG | + | chr2_1:72785513-72785532 | Msa0223230:intron | 30.0% | |
| TAAACACTTGTGACACTATT+TGG | + | chr2_1:72785694-72785713 | Msa0223230:intron | 30.0% | |
| AAACACTTGTGACACTATTT+GGG | + | chr2_1:72785695-72785714 | Msa0223230:intron | 30.0% | |
| AAGCTATCCTATAGATGTTA+TGG | - | chr2_1:72785774-72785793 | None:intergenic | 30.0% | |
| AAATAAACTACAAGCCTACT+TGG | - | chr2_1:72785920-72785939 | None:intergenic | 30.0% | |
| !! | CTTGTAGTTTATTTTCTTCG+TGG | + | chr2_1:72785926-72785945 | Msa0223230:intron | 30.0% |
| !! | TGTAGTTTATTTTCTTCGTG+GGG | + | chr2_1:72785928-72785947 | Msa0223230:intron | 30.0% |
| AAGAAACTATTGATGTTGCA+GGG | - | chr2_1:72786026-72786045 | None:intergenic | 30.0% | |
| AAAGAAACTATTGATGTTGC+AGG | - | chr2_1:72786027-72786046 | None:intergenic | 30.0% | |
| TGCAAAGATTGACATGTTTA+AGG | + | chr2_1:72786192-72786211 | Msa0223230:CDS | 30.0% | |
| GCAAAGATTGACATGTTTAA+GGG | + | chr2_1:72786193-72786212 | Msa0223230:CDS | 30.0% | |
| TATCAGCACAAACAAAAGAT+AGG | - | chr2_1:72786369-72786388 | None:intergenic | 30.0% | |
| !! | ATCTTTTGTTTGTGCTGATA+TGG | + | chr2_1:72786369-72786388 | Msa0223230:three_prime_UTR | 30.0% |
| ATGAAGTCAAGCATGTTAAA+AGG | - | chr2_1:72786443-72786462 | None:intergenic | 30.0% | |
| ! | AACATGCTTGACTTCATTTT+AGG | + | chr2_1:72786446-72786465 | Msa0223230:three_prime_UTR | 30.0% |
| ! | CACTATCATATTTTCTCAAG+TGG | - | chr2_1:72786532-72786551 | None:intergenic | 30.0% |
| AAAACCCACTTTCACAAAAG+TGG | + | chr2_1:72784844-72784863 | Msa0223230:CDS | 35.0% | |
| !! | TGATCCACTTTTGTGAAAGT+GGG | - | chr2_1:72784851-72784870 | None:intergenic | 35.0% |
| ! | ACCTTTTTGCAGAACAGTTT+CGG | - | chr2_1:72784924-72784943 | None:intergenic | 35.0% |
| GTGTTCATAAGGTTCTTAGT+TGG | + | chr2_1:72785242-72785261 | Msa0223230:intron | 35.0% | |
| AGTTTAGAGAGGAAGGAAAA+TGG | + | chr2_1:72785573-72785592 | Msa0223230:intron | 35.0% | |
| GTTTAGAGAGGAAGGAAAAT+GGG | + | chr2_1:72785574-72785593 | Msa0223230:intron | 35.0% | |
| TCATTCTCAATCATTCCTTC+AGG | + | chr2_1:72785610-72785629 | Msa0223230:intron | 35.0% | |
| CATTCTCAATCATTCCTTCA+GGG | + | chr2_1:72785611-72785630 | Msa0223230:intron | 35.0% | |
| AGCAAATCCTTGAGTAAGTA+GGG | + | chr2_1:72785634-72785653 | Msa0223230:intron | 35.0% | |
| TATGCAAATGCTTGTGCATA+AGG | - | chr2_1:72785962-72785981 | None:intergenic | 35.0% | |
| CACAAGCATTTGCATATAAG+TGG | + | chr2_1:72785966-72785985 | Msa0223230:intron | 35.0% | |
| ACATGTTTAAGGGATCAATG+AGG | + | chr2_1:72786203-72786222 | Msa0223230:CDS | 35.0% | |
| CTGATATGGCAAAACTTAAC+TGG | + | chr2_1:72786383-72786402 | Msa0223230:three_prime_UTR | 35.0% | |
| AAAACCCACTTTCACAAAAG+TGG | + | chr2_1:72784844-72784863 | Msa0223230:CDS | 35.0% | |
| !! | TGATCCACTTTTGTGAAAGT+GGG | - | chr2_1:72784851-72784870 | None:intergenic | 35.0% |
| ! | ACCTTTTTGCAGAACAGTTT+CGG | - | chr2_1:72784924-72784943 | None:intergenic | 35.0% |
| GTGTTCATAAGGTTCTTAGT+TGG | + | chr2_1:72785242-72785261 | Msa0223230:intron | 35.0% | |
| AGTTTAGAGAGGAAGGAAAA+TGG | + | chr2_1:72785573-72785592 | Msa0223230:intron | 35.0% | |
| GTTTAGAGAGGAAGGAAAAT+GGG | + | chr2_1:72785574-72785593 | Msa0223230:intron | 35.0% | |
| TCATTCTCAATCATTCCTTC+AGG | + | chr2_1:72785610-72785629 | Msa0223230:intron | 35.0% | |
| CATTCTCAATCATTCCTTCA+GGG | + | chr2_1:72785611-72785630 | Msa0223230:intron | 35.0% | |
| AGCAAATCCTTGAGTAAGTA+GGG | + | chr2_1:72785634-72785653 | Msa0223230:intron | 35.0% | |
| TATGCAAATGCTTGTGCATA+AGG | - | chr2_1:72785962-72785981 | None:intergenic | 35.0% | |
| CACAAGCATTTGCATATAAG+TGG | + | chr2_1:72785966-72785985 | Msa0223230:intron | 35.0% | |
| ACATGTTTAAGGGATCAATG+AGG | + | chr2_1:72786203-72786222 | Msa0223230:CDS | 35.0% | |
| CTGATATGGCAAAACTTAAC+TGG | + | chr2_1:72786383-72786402 | Msa0223230:three_prime_UTR | 35.0% | |
| !! | AAAGTGGGTTTTCTCTTTGC+GGG | - | chr2_1:72784836-72784855 | None:intergenic | 40.0% |
| !! | GAAAGTGGGTTTTCTCTTTG+CGG | - | chr2_1:72784837-72784856 | None:intergenic | 40.0% |
| !! | CTGATCCACTTTTGTGAAAG+TGG | - | chr2_1:72784852-72784871 | None:intergenic | 40.0% |
| AAAGTGGATCAGATGAAACC+AGG | + | chr2_1:72784860-72784879 | Msa0223230:CDS | 40.0% | |
| CAGATGAAACCAGGAACAAA+CGG | + | chr2_1:72784869-72784888 | Msa0223230:CDS | 40.0% | |
| ! | TTTTTGCAGAACAGTTTCGG+AGG | - | chr2_1:72784921-72784940 | None:intergenic | 40.0% |
| TCCGAAACTGTTCTGCAAAA+AGG | + | chr2_1:72784920-72784939 | Msa0223230:CDS | 40.0% | |
| GAAACTGTTCTGCAAAAAGG+TGG | + | chr2_1:72784923-72784942 | Msa0223230:CDS | 40.0% | |
| ATACCACGAGAAGATGAAGA+AGG | - | chr2_1:72784959-72784978 | None:intergenic | 40.0% | |
| AGACACTCAGAGATAAGAGT+AGG | - | chr2_1:72784989-72785008 | None:intergenic | 40.0% | |
| CTTATCTCTGAGTGTCTCAT+CGG | + | chr2_1:72784992-72785011 | Msa0223230:CDS | 40.0% | |
| ! | GGTGATTGTTACACCCATTT+TGG | + | chr2_1:72785263-72785282 | Msa0223230:intron | 40.0% |
| CCGAGTAACAACACCAAAAT+GGG | - | chr2_1:72785279-72785298 | None:intergenic | 40.0% | |
| !!! | CCCATTTTGGTGTTGTTACT+CGG | + | chr2_1:72785276-72785295 | Msa0223230:intron | 40.0% |
| TCCGAGTAACAACACCAAAA+TGG | - | chr2_1:72785280-72785299 | None:intergenic | 40.0% | |
| ! | TGATTCATTGGTTGGGCTTT+AGG | + | chr2_1:72785521-72785540 | Msa0223230:intron | 40.0% |
| ! | GATTCATTGGTTGGGCTTTA+GGG | + | chr2_1:72785522-72785541 | Msa0223230:intron | 40.0% |
| ! | ATTCATTGGTTGGGCTTTAG+GGG | + | chr2_1:72785523-72785542 | Msa0223230:intron | 40.0% |
| !! | TGGGCTTTAGGGGATAAAAA+TGG | + | chr2_1:72785533-72785552 | Msa0223230:intron | 40.0% |
| CTCTCTAAACTCATGAGACA+TGG | - | chr2_1:72785564-72785583 | None:intergenic | 40.0% | |
| CATGTCTCATGAGTTTAGAG+AGG | + | chr2_1:72785562-72785581 | Msa0223230:intron | 40.0% | |
| TCTCATGAGTTTAGAGAGGA+AGG | + | chr2_1:72785566-72785585 | Msa0223230:intron | 40.0% | |
| GAGCAAATCCTTGAGTAAGT+AGG | + | chr2_1:72785633-72785652 | Msa0223230:intron | 40.0% | |
| CAAACAACCCTACTTACTCA+AGG | - | chr2_1:72785644-72785663 | None:intergenic | 40.0% | |
| CTTGAGTAAGTAGGGTTGTT+TGG | + | chr2_1:72785642-72785661 | Msa0223230:intron | 40.0% | |
| GTAAGTAGGGTTGTTTGGAT+TGG | + | chr2_1:72785647-72785666 | Msa0223230:intron | 40.0% | |
| CATTGCAGTTGAGCTTATGA+AGG | + | chr2_1:72786144-72786163 | Msa0223230:intron | 40.0% | |
| CTTTAACAACGAACTCTGCA+GGG | - | chr2_1:72786267-72786286 | None:intergenic | 40.0% | |
| TCTTTAACAACGAACTCTGC+AGG | - | chr2_1:72786268-72786287 | None:intergenic | 40.0% | |
| TGCAGAGTTCGTTGTTAAAG+AGG | + | chr2_1:72786267-72786286 | Msa0223230:CDS | 40.0% | |
| !! | AAAGTGGGTTTTCTCTTTGC+GGG | - | chr2_1:72784836-72784855 | None:intergenic | 40.0% |
| !! | GAAAGTGGGTTTTCTCTTTG+CGG | - | chr2_1:72784837-72784856 | None:intergenic | 40.0% |
| !! | CTGATCCACTTTTGTGAAAG+TGG | - | chr2_1:72784852-72784871 | None:intergenic | 40.0% |
| AAAGTGGATCAGATGAAACC+AGG | + | chr2_1:72784860-72784879 | Msa0223230:CDS | 40.0% | |
| CAGATGAAACCAGGAACAAA+CGG | + | chr2_1:72784869-72784888 | Msa0223230:CDS | 40.0% | |
| ! | TTTTTGCAGAACAGTTTCGG+AGG | - | chr2_1:72784921-72784940 | None:intergenic | 40.0% |
| TCCGAAACTGTTCTGCAAAA+AGG | + | chr2_1:72784920-72784939 | Msa0223230:CDS | 40.0% | |
| GAAACTGTTCTGCAAAAAGG+TGG | + | chr2_1:72784923-72784942 | Msa0223230:CDS | 40.0% | |
| ATACCACGAGAAGATGAAGA+AGG | - | chr2_1:72784959-72784978 | None:intergenic | 40.0% | |
| AGACACTCAGAGATAAGAGT+AGG | - | chr2_1:72784989-72785008 | None:intergenic | 40.0% | |
| CTTATCTCTGAGTGTCTCAT+CGG | + | chr2_1:72784992-72785011 | Msa0223230:CDS | 40.0% | |
| ! | GGTGATTGTTACACCCATTT+TGG | + | chr2_1:72785263-72785282 | Msa0223230:intron | 40.0% |
| CCGAGTAACAACACCAAAAT+GGG | - | chr2_1:72785279-72785298 | None:intergenic | 40.0% | |
| !!! | CCCATTTTGGTGTTGTTACT+CGG | + | chr2_1:72785276-72785295 | Msa0223230:intron | 40.0% |
| TCCGAGTAACAACACCAAAA+TGG | - | chr2_1:72785280-72785299 | None:intergenic | 40.0% | |
| ! | TGATTCATTGGTTGGGCTTT+AGG | + | chr2_1:72785521-72785540 | Msa0223230:intron | 40.0% |
| ! | GATTCATTGGTTGGGCTTTA+GGG | + | chr2_1:72785522-72785541 | Msa0223230:intron | 40.0% |
| ! | ATTCATTGGTTGGGCTTTAG+GGG | + | chr2_1:72785523-72785542 | Msa0223230:intron | 40.0% |
| !! | TGGGCTTTAGGGGATAAAAA+TGG | + | chr2_1:72785533-72785552 | Msa0223230:intron | 40.0% |
| CTCTCTAAACTCATGAGACA+TGG | - | chr2_1:72785564-72785583 | None:intergenic | 40.0% | |
| CATGTCTCATGAGTTTAGAG+AGG | + | chr2_1:72785562-72785581 | Msa0223230:intron | 40.0% | |
| TCTCATGAGTTTAGAGAGGA+AGG | + | chr2_1:72785566-72785585 | Msa0223230:intron | 40.0% | |
| GAGCAAATCCTTGAGTAAGT+AGG | + | chr2_1:72785633-72785652 | Msa0223230:intron | 40.0% | |
| CAAACAACCCTACTTACTCA+AGG | - | chr2_1:72785644-72785663 | None:intergenic | 40.0% | |
| CTTGAGTAAGTAGGGTTGTT+TGG | + | chr2_1:72785642-72785661 | Msa0223230:intron | 40.0% | |
| GTAAGTAGGGTTGTTTGGAT+TGG | + | chr2_1:72785647-72785666 | Msa0223230:intron | 40.0% | |
| CATTGCAGTTGAGCTTATGA+AGG | + | chr2_1:72786144-72786163 | Msa0223230:intron | 40.0% | |
| CTTTAACAACGAACTCTGCA+GGG | - | chr2_1:72786267-72786286 | None:intergenic | 40.0% | |
| TCTTTAACAACGAACTCTGC+AGG | - | chr2_1:72786268-72786287 | None:intergenic | 40.0% | |
| TGCAGAGTTCGTTGTTAAAG+AGG | + | chr2_1:72786267-72786286 | Msa0223230:CDS | 40.0% | |
| AAAGTGTGTCCGTTTGTTCC+TGG | - | chr2_1:72784881-72784900 | None:intergenic | 45.0% | |
| CGGACACACTTTGATTGCTA+AGG | + | chr2_1:72784889-72784908 | Msa0223230:CDS | 45.0% | |
| ACTGTTCTGCAAAAAGGTGG+AGG | + | chr2_1:72784926-72784945 | Msa0223230:CDS | 45.0% | |
| AGACCTTCTTCATCTTCTCG+TGG | + | chr2_1:72784953-72784972 | Msa0223230:CDS | 45.0% | |
| TGTCTCATCGGTGATGAAAC+TGG | + | chr2_1:72785004-72785023 | Msa0223230:CDS | 45.0% | |
| ATTGCGAGCGGTGAAAATGA+TGG | - | chr2_1:72785032-72785051 | None:intergenic | 45.0% | |
| AGAACCTTGTTCATTGCGAG+CGG | - | chr2_1:72785044-72785063 | None:intergenic | 45.0% | |
| AGAGGAAGGAAAATGGGAGT+AGG | + | chr2_1:72785580-72785599 | Msa0223230:intron | 45.0% | |
| TCGCAGTCGATTGCAAATTG+TGG | - | chr2_1:72786001-72786020 | None:intergenic | 45.0% | |
| GTTTAAGGGATCAATGAGGC+TGG | + | chr2_1:72786207-72786226 | Msa0223230:CDS | 45.0% | |
| AAAGTGTGTCCGTTTGTTCC+TGG | - | chr2_1:72784881-72784900 | None:intergenic | 45.0% | |
| CGGACACACTTTGATTGCTA+AGG | + | chr2_1:72784889-72784908 | Msa0223230:CDS | 45.0% | |
| ACTGTTCTGCAAAAAGGTGG+AGG | + | chr2_1:72784926-72784945 | Msa0223230:CDS | 45.0% | |
| AGACCTTCTTCATCTTCTCG+TGG | + | chr2_1:72784953-72784972 | Msa0223230:CDS | 45.0% | |
| TGTCTCATCGGTGATGAAAC+TGG | + | chr2_1:72785004-72785023 | Msa0223230:CDS | 45.0% | |
| ATTGCGAGCGGTGAAAATGA+TGG | - | chr2_1:72785032-72785051 | None:intergenic | 45.0% | |
| AGAACCTTGTTCATTGCGAG+CGG | - | chr2_1:72785044-72785063 | None:intergenic | 45.0% | |
| AGAGGAAGGAAAATGGGAGT+AGG | + | chr2_1:72785580-72785599 | Msa0223230:intron | 45.0% | |
| TCGCAGTCGATTGCAAATTG+TGG | - | chr2_1:72786001-72786020 | None:intergenic | 45.0% | |
| GTTTAAGGGATCAATGAGGC+TGG | + | chr2_1:72786207-72786226 | Msa0223230:CDS | 45.0% | |
| ! | GGGTTTTCTCTTTGCGGGTT+TGG | - | chr2_1:72784831-72784850 | None:intergenic | 50.0% |
| TTCACCGCTCGCAATGAACA+AGG | + | chr2_1:72785037-72785056 | Msa0223230:CDS | 50.0% | |
| ! | CTCAAGGATTTGCTCCCTGA+AGG | - | chr2_1:72785628-72785647 | None:intergenic | 50.0% |
| TCTTAAGCGCGCCACTTACA+TGG | + | chr2_1:72785862-72785881 | Msa0223230:intron | 50.0% | |
| GCAGTTGAGCTTATGAAGGC+TGG | + | chr2_1:72786148-72786167 | Msa0223230:intron | 50.0% | |
| AATGCGCCCCCATTTGTCAA+CGG | - | chr2_1:72786233-72786252 | None:intergenic | 50.0% | |
| ! | GGGTTTTCTCTTTGCGGGTT+TGG | - | chr2_1:72784831-72784850 | None:intergenic | 50.0% |
| TTCACCGCTCGCAATGAACA+AGG | + | chr2_1:72785037-72785056 | Msa0223230:CDS | 50.0% | |
| ! | CTCAAGGATTTGCTCCCTGA+AGG | - | chr2_1:72785628-72785647 | None:intergenic | 50.0% |
| TCTTAAGCGCGCCACTTACA+TGG | + | chr2_1:72785862-72785881 | Msa0223230:intron | 50.0% | |
| GCAGTTGAGCTTATGAAGGC+TGG | + | chr2_1:72786148-72786167 | Msa0223230:intron | 50.0% | |
| AATGCGCCCCCATTTGTCAA+CGG | - | chr2_1:72786233-72786252 | None:intergenic | 50.0% | |
| ! | TGAGGCTGGCCGTTGACAAA+TGG | + | chr2_1:72786221-72786240 | Msa0223230:CDS | 55.0% |
| ! | GAGGCTGGCCGTTGACAAAT+GGG | + | chr2_1:72786222-72786241 | Msa0223230:CDS | 55.0% |
| ! | AGGCTGGCCGTTGACAAATG+GGG | + | chr2_1:72786223-72786242 | Msa0223230:CDS | 55.0% |
| ! | TGACAAATGGGGGCGCATTG+AGG | + | chr2_1:72786234-72786253 | Msa0223230:CDS | 55.0% |
| ! | TGAGGCTGGCCGTTGACAAA+TGG | + | chr2_1:72786221-72786240 | Msa0223230:CDS | 55.0% |
| ! | GAGGCTGGCCGTTGACAAAT+GGG | + | chr2_1:72786222-72786241 | Msa0223230:CDS | 55.0% |
| ! | AGGCTGGCCGTTGACAAATG+GGG | + | chr2_1:72786223-72786242 | Msa0223230:CDS | 55.0% |
| ! | TGACAAATGGGGGCGCATTG+AGG | + | chr2_1:72786234-72786253 | Msa0223230:CDS | 55.0% |
| ! | GGCTGGCCGTTGACAAATGG+GGG | + | chr2_1:72786224-72786243 | Msa0223230:CDS | 60.0% |
| ! | GGCTGGCCGTTGACAAATGG+GGG | + | chr2_1:72786224-72786243 | Msa0223230:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 72784648 | 72786603 | 72784648 | ID=Msa0223230;Name=Msa0223230 |
| chr2_1 | mRNA | 72784648 | 72786603 | 72784648 | ID=Msa0223230-mRNA-1;Parent=Msa0223230;Name=Msa0223230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=143|1|1|1|1|1|2|261|152 |
| chr2_1 | exon | 72784648 | 72785058 | 72784648 | ID=Msa0223230-mRNA-1:exon:21043;Parent=Msa0223230-mRNA-1 |
| chr2_1 | exon | 72786152 | 72786603 | 72786152 | ID=Msa0223230-mRNA-1:exon:21044;Parent=Msa0223230-mRNA-1 |
| chr2_1 | five_prime_UTR | 72784648 | 72784790 | 72784648 | ID=Msa0223230-mRNA-1:five_prime_utr;Parent=Msa0223230-mRNA-1 |
| chr2_1 | CDS | 72784791 | 72785058 | 72784791 | ID=Msa0223230-mRNA-1:cds;Parent=Msa0223230-mRNA-1 |
| chr2_1 | CDS | 72786152 | 72786342 | 72786152 | ID=Msa0223230-mRNA-1:cds;Parent=Msa0223230-mRNA-1 |
| chr2_1 | three_prime_UTR | 72786343 | 72786603 | 72786343 | ID=Msa0223230-mRNA-1:three_prime_utr;Parent=Msa0223230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
