AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329540 MtrunA17_Chr4g0055081 100.000 206 0 0 1 206 1 206 2.83e-154 425
Msa1329540 MtrunA17_Chr5g0400131 91.304 207 17 1 1 206 1 207 1.13e-140 391
Msa1329540 MtrunA17_Chr8g0382221 84.541 207 31 1 1 206 1 207 2.06e-130 365
Msa1329540 MtrunA17_Chr3g0123971 85.024 207 29 2 1 206 1 206 1.53e-128 360
Msa1329540 MtrunA17_Chr1g0199331 45.732 164 88 1 9 171 31 194 2.71e-48 156
Msa1329540 MtrunA17_Chr8g0349711 43.478 161 91 0 10 170 7 167 3.54e-46 151
Msa1329540 MtrunA17_Chr5g0433561 41.615 161 94 0 11 171 12 172 4.63e-46 150
Msa1329540 MtrunA17_Chr3g0109721 41.615 161 94 0 11 171 12 172 6.84e-46 150
Msa1329540 MtrunA17_Chr8g0390561 43.125 160 91 0 11 170 11 170 2.32e-45 149
Msa1329540 MtrunA17_Chr8g0349681 44.099 161 90 0 10 170 176 336 1.83e-44 155
Msa1329540 MtrunA17_Chr8g0349681 42.857 161 92 0 10 170 385 545 4.11e-41 146
Msa1329540 MtrunA17_Chr8g0349681 41.250 160 94 0 10 169 14 173 1.07e-40 145
Msa1329540 MtrunA17_Chr2g0276931 42.857 161 92 0 10 170 10 170 2.29e-44 146
Msa1329540 MtrunA17_Chr2g0290891 34.286 210 119 2 10 206 7 210 4.60e-44 146
Msa1329540 MtrunA17_Chr6g0458081 39.130 161 98 0 10 170 7 167 2.65e-43 144
Msa1329540 MtrunA17_Chr4g0032201 34.634 205 122 2 10 205 13 214 2.88e-43 144
Msa1329540 MtrunA17_Chr3g0112681 35.450 189 113 1 10 189 13 201 2.72e-42 142
Msa1329540 MtrunA17_Chr4g0046261 34.197 193 109 1 10 184 14 206 6.21e-42 140
Msa1329540 MtrunA17_Chr8g0381841 38.961 154 94 0 10 163 18 171 8.54e-42 140
Msa1329540 MtrunA17_Chr7g0231131 39.490 157 95 0 10 166 16 172 9.15e-42 140
Msa1329540 MtrunA17_Chr4g0055651 39.752 161 97 0 10 170 9 169 1.04e-41 140
Msa1329540 MtrunA17_Chr1g0174281 38.217 157 97 0 10 166 16 172 1.51e-41 140
Msa1329540 MtrunA17_Chr2g0276941 38.710 155 95 0 10 164 16 170 3.16e-41 139
Msa1329540 MtrunA17_Chr3g0123821 37.662 154 96 0 10 163 17 170 3.41e-41 139
Msa1329540 MtrunA17_Chr8g0346421 38.854 157 96 0 10 166 27 183 6.82e-41 139
Msa1329540 MtrunA17_Chr7g0275991 38.854 157 96 0 10 166 21 177 8.29e-41 138
Msa1329540 MtrunA17_Chr4g0040781 33.161 193 111 1 10 184 14 206 8.85e-41 138
Msa1329540 MtrunA17_Chr7g0250531 36.181 199 118 2 10 205 9 201 1.09e-40 137
Msa1329540 MtrunA17_Chr1g0189361 38.854 157 96 0 10 166 15 171 1.53e-40 137
Msa1329540 MtrunA17_Chr7g0234201 40.260 154 92 0 10 163 14 167 1.99e-40 137
Msa1329540 MtrunA17_Chr8g0335471 39.130 161 98 0 10 170 9 169 2.03e-40 136
Msa1329540 MtrunA17_Chr8g0351861 38.312 154 95 0 10 163 17 170 2.42e-40 137
Msa1329540 MtrunA17_Chr2g0283131 38.217 157 97 0 10 166 14 170 3.13e-40 136
Msa1329540 MtrunA17_Chr2g0315551 36.943 157 99 0 10 166 14 170 7.67e-40 135
Msa1329540 MtrunA17_Chr4g0034871 37.981 208 106 6 11 206 10 206 9.40e-40 135
Msa1329540 MtrunA17_Chr6g0482721 39.610 154 93 0 10 163 13 166 2.84e-39 134
Msa1329540 MtrunA17_Chr2g0319951 36.306 157 100 0 10 166 14 170 6.96e-39 133
Msa1329540 MtrunA17_Chr2g0325091 33.178 214 113 3 10 205 12 213 1.12e-38 132
Msa1329540 MtrunA17_Chr4g0030911 36.224 196 123 2 11 204 17 212 1.15e-38 132
Msa1329540 MtrunA17_Chr1g0212521 35.176 199 125 3 11 206 17 214 1.97e-38 132
Msa1329540 MtrunA17_Chr7g0214241 37.580 157 98 0 10 166 16 172 3.11e-38 131
Msa1329540 MtrunA17_Chr1g0182321 39.412 170 98 2 3 167 5 174 3.11e-38 131
Msa1329540 MtrunA17_Chr1g0182301 39.412 170 98 2 3 167 5 174 5.17e-38 130
Msa1329540 MtrunA17_Chr4g0004661 37.931 203 114 3 11 206 66 263 9.48e-38 131
Msa1329540 MtrunA17_Chr7g0263071 40.506 158 93 1 11 167 17 174 1.47e-37 129
Msa1329540 MtrunA17_Chr2g0331691 36.946 203 116 3 11 206 12 209 4.16e-37 128
Msa1329540 MtrunA17_Chr8g0384311 42.138 159 89 3 10 166 14 171 1.62e-36 127
Msa1329540 MtrunA17_Chr6g0466301 34.975 203 119 4 11 206 10 206 4.28e-36 125
Msa1329540 MtrunA17_Chr6g0465491 34.975 203 119 4 11 206 10 206 4.28e-36 125
Msa1329540 MtrunA17_Chr1g0201121 33.498 203 123 3 11 206 10 207 5.22e-36 125
Msa1329540 MtrunA17_Chr1g0180291 37.374 198 118 5 10 204 15 209 7.77e-36 125
Msa1329540 MtrunA17_Chr1g0197331 35.859 198 121 4 10 204 16 210 7.08e-35 122
Msa1329540 MtrunA17_Chr2g0327911 40.000 160 92 3 11 167 17 175 1.12e-34 122
Msa1329540 MtrunA17_Chr7g0265001 36.000 200 119 5 10 204 17 212 1.53e-34 122
Msa1329540 MtrunA17_Chr3g0130271 41.875 160 89 4 10 166 13 171 5.02e-34 120
Msa1329540 MtrunA17_Chr8g0383261 34.135 208 113 7 11 206 14 209 1.87e-33 119
Msa1329540 MtrunA17_Chr8g0392931 36.943 157 99 0 10 166 15 171 6.46e-33 117
Msa1329540 MtrunA17_Chr1g0159481 38.994 159 94 3 10 166 18 175 8.71e-33 117
Msa1329540 MtrunA17_Chr3g0138121 30.102 196 130 4 10 201 14 206 3.36e-27 103
Msa1329540 MtrunA17_Chr3g0138101 30.052 193 128 4 10 198 14 203 4.38e-27 102
Msa1329540 MtrunA17_Chr3g0138111 32.738 168 110 3 10 177 14 178 1.52e-26 101
Msa1329540 MtrunA17_Chr3g0117931 36.970 165 90 5 11 163 10 172 1.24e-23 93.6
Msa1329540 MtrunA17_Chr2g0325101 35.758 165 92 5 11 163 8 170 1.71e-23 92.8
Msa1329540 MtrunA17_Chr8g0371501 33.333 165 96 5 11 163 8 170 5.55e-22 89.0
Msa1329540 MtrunA17_Chr6g0486041 33.939 165 95 5 11 163 8 170 2.27e-21 87.4
Msa1329540 MtrunA17_Chr5g0405791 32.727 165 97 5 11 163 8 170 3.20e-21 87.0
Msa1329540 MtrunA17_Chr4g0037021 32.121 165 98 5 11 163 8 170 1.38e-20 85.1
Msa1329540 MtrunA17_Chr4g0046211 35.385 130 81 3 11 139 8 135 2.44e-18 78.2
Msa1329540 MtrunA17_Chr6g0466161 27.513 189 121 5 26 206 7 187 9.27e-18 78.2
Msa1329540 MtrunA17_Chr6g0466431 37.500 96 51 1 11 106 10 96 1.42e-17 74.7
Msa1329540 MtrunA17_Chr6g0465611 37.500 96 51 1 11 106 10 96 1.42e-17 74.7
Msa1329540 MtrunA17_Chr6g0465471 30.667 150 95 3 26 167 7 155 1.56e-17 77.4
Msa1329540 MtrunA17_Chr5g0443631 26.316 171 120 3 5 170 100 269 9.66e-16 73.9
Msa1329540 MtrunA17_Chr4g0024431 24.260 169 122 2 7 170 89 256 1.00e-12 65.5
Msa1329540 MtrunA17_Chr1g0178291 30.769 156 99 4 12 166 431 578 1.45e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329540 AT2G44610.1 91.346 208 16 1 1 206 1 208 8.18e-141 392
Msa1329540 AT5G10260.1 85.507 207 29 1 1 206 1 207 7.13e-130 364
Msa1329540 AT2G22290.1 83.575 207 33 1 1 206 1 207 7.30e-126 353
Msa1329540 AT4G39890.1 80.612 196 36 2 1 194 1 196 1.45e-112 320
Msa1329540 AT5G64990.1 74.372 199 49 1 10 206 8 206 1.20e-104 300
Msa1329540 AT5G64990.2 71.845 206 49 2 10 206 8 213 6.23e-102 293
Msa1329540 AT3G54840.1 46.341 164 87 1 9 171 33 196 4.47e-49 159
Msa1329540 AT3G54840.3 46.584 161 85 1 12 171 2 162 2.67e-48 155
Msa1329540 AT5G45130.1 42.236 161 93 0 11 171 12 172 1.09e-47 155
Msa1329540 AT3G54840.2 46.795 156 82 1 9 163 33 188 8.49e-47 153
Msa1329540 AT4G19640.1 40.994 161 95 0 11 171 12 172 2.05e-46 152
Msa1329540 AT5G45130.2 41.509 159 93 0 13 171 22 180 1.19e-45 150
Msa1329540 AT4G17160.1 40.741 162 96 0 9 170 6 167 1.82e-45 150
Msa1329540 AT4G17170.1 35.885 209 114 3 10 204 7 209 1.83e-44 147
Msa1329540 AT3G11730.1 41.615 161 94 0 10 170 9 169 1.30e-43 145
Msa1329540 AT1G09630.1 40.127 157 94 0 10 166 13 169 5.39e-43 144
Msa1329540 AT5G65270.1 36.943 157 99 0 10 166 18 174 3.04e-42 142
Msa1329540 AT3G12160.1 39.490 157 95 0 10 166 16 172 5.74e-42 141
Msa1329540 AT4G35860.1 37.888 161 100 0 10 170 7 167 6.23e-42 141
Msa1329540 AT1G07410.1 38.854 157 96 0 10 166 13 169 9.58e-42 140
Msa1329540 AT5G59150.1 37.888 161 100 0 10 170 13 173 1.29e-41 140
Msa1329540 AT1G28550.1 33.495 206 125 2 10 205 14 217 1.96e-41 140
Msa1329540 AT1G05810.1 36.139 202 124 2 10 206 13 214 3.51e-41 139
Msa1329540 AT4G39990.1 36.306 157 100 0 10 166 18 174 4.33e-41 139
Msa1329540 AT5G47520.1 38.854 157 96 0 10 166 15 171 4.69e-41 139
Msa1329540 AT3G15060.1 37.580 157 98 0 10 166 14 170 4.93e-41 139
Msa1329540 AT5G60860.1 33.161 193 111 1 10 184 14 206 5.26e-41 139
Msa1329540 AT4G17530.1 39.752 161 97 0 10 170 9 169 6.84e-41 138
Msa1329540 AT5G47200.1 39.752 161 97 0 10 170 9 169 7.06e-41 138
Msa1329540 AT3G46830.1 37.580 157 98 0 10 166 13 169 1.07e-40 138
Msa1329540 AT3G46830.2 37.580 157 98 0 10 166 13 169 1.07e-40 138
Msa1329540 AT1G05810.2 36.139 202 124 2 10 206 59 260 1.33e-40 139
Msa1329540 AT1G02130.1 39.130 161 98 0 10 170 9 169 1.41e-40 137
Msa1329540 AT4G18430.1 37.580 157 98 0 10 166 14 170 3.80e-40 136
Msa1329540 AT1G18200.1 40.909 154 91 0 10 163 14 167 4.28e-40 137
Msa1329540 AT5G47960.1 37.662 154 96 0 10 163 16 169 1.11e-39 135
Msa1329540 AT2G31680.1 38.854 157 96 0 10 166 13 169 1.12e-39 135
Msa1329540 AT3G07410.1 40.909 154 91 0 10 163 13 166 3.25e-39 134
Msa1329540 AT2G33870.1 32.039 206 128 2 10 205 14 217 4.14e-39 134
Msa1329540 AT1G16920.1 36.306 157 100 0 10 166 14 170 4.66e-39 134
Msa1329540 AT2G43130.1 37.580 157 98 0 10 166 13 169 8.08e-39 133
Msa1329540 AT1G06400.1 37.580 157 98 0 10 166 14 170 1.00e-38 133
Msa1329540 AT1G73640.1 38.961 154 94 0 10 163 14 167 1.04e-38 133
Msa1329540 AT1G52280.1 37.931 203 113 3 11 206 10 206 1.73e-38 132
Msa1329540 AT3G18820.1 38.462 208 105 6 11 206 10 206 2.88e-38 131
Msa1329540 AT4G19640.2 42.063 126 73 0 11 136 12 137 1.60e-37 127
Msa1329540 AT1G01200.1 39.490 157 93 2 10 164 29 185 2.24e-37 130
Msa1329540 AT5G45750.1 35.032 157 102 0 10 166 14 170 2.43e-37 129
Msa1329540 AT5G03530.2 35.859 198 124 3 10 205 14 210 3.95e-37 129
Msa1329540 AT5G03530.1 35.859 198 124 3 10 205 14 210 3.95e-37 129
Msa1329540 AT5G03520.1 35.238 210 130 3 1 204 3 212 5.46e-37 128
Msa1329540 AT3G46060.2 39.873 158 94 1 11 167 17 174 6.02e-37 128
Msa1329540 AT3G46060.3 39.873 158 94 1 11 167 17 174 6.02e-37 128
Msa1329540 AT3G46060.1 39.873 158 94 1 11 167 17 174 6.02e-37 128
Msa1329540 AT3G09900.1 37.500 216 122 4 1 205 3 216 8.58e-37 128
Msa1329540 AT5G59840.1 39.873 158 94 1 11 167 17 174 9.87e-37 128
Msa1329540 AT3G16100.1 37.931 203 113 3 11 206 10 206 1.07e-36 127
Msa1329540 AT4G19640.3 42.400 125 72 0 11 135 12 136 2.42e-36 126
Msa1329540 AT4G18800.1 34.395 157 103 0 10 166 14 170 4.22e-36 126
Msa1329540 AT3G53610.2 39.873 158 94 1 11 167 17 174 4.60e-36 126
Msa1329540 AT3G53610.3 39.873 158 94 1 11 167 17 174 4.60e-36 126
Msa1329540 AT3G53610.1 39.873 158 94 1 11 167 17 174 4.60e-36 126
Msa1329540 AT1G43890.3 39.080 174 101 4 10 181 14 184 1.52e-34 122
Msa1329540 AT1G43890.1 39.080 174 101 4 10 181 14 184 1.52e-34 122
Msa1329540 AT1G43890.2 39.080 174 101 4 10 181 14 184 1.52e-34 122
Msa1329540 AT1G49300.2 36.842 209 107 7 11 206 10 206 2.08e-34 121
Msa1329540 AT1G49300.1 36.842 209 107 7 11 206 10 206 2.08e-34 121
Msa1329540 AT2G21880.1 35.407 209 115 7 11 206 11 212 1.03e-33 120
Msa1329540 AT4G09720.1 33.990 203 121 6 11 206 10 206 1.08e-33 119
Msa1329540 AT3G09910.3 40.625 160 92 3 10 167 14 172 2.20e-33 119
Msa1329540 AT3G09910.1 40.625 160 92 3 10 167 14 172 2.20e-33 119
Msa1329540 AT3G09910.2 40.625 160 92 3 10 167 14 172 2.20e-33 119
Msa1329540 AT3G09910.5 40.625 160 92 3 10 167 14 172 4.09e-33 118
Msa1329540 AT3G09910.4 40.625 160 92 3 10 167 14 172 4.09e-33 118
Msa1329540 AT1G22740.1 36.842 209 104 9 11 206 10 203 9.31e-33 117
Msa1329540 AT4G09720.4 32.212 208 123 5 11 206 10 211 2.20e-32 116
Msa1329540 AT5G39620.1 34.450 209 117 6 9 206 5 204 8.09e-32 115
Msa1329540 AT4G09720.3 32.243 214 121 6 11 206 10 217 1.20e-31 115
Msa1329540 AT4G35860.2 41.525 118 69 0 53 170 4 121 1.56e-31 113
Msa1329540 AT5G03520.2 34.356 163 105 2 44 204 40 202 3.09e-28 105
Msa1329540 AT5G59150.2 37.288 118 74 0 53 170 5 122 3.40e-27 102
Msa1329540 AT5G55190.1 30.052 193 128 4 10 198 14 203 4.40e-27 103
Msa1329540 AT5G20020.1 32.738 168 110 3 10 177 14 178 9.05e-27 102
Msa1329540 AT2G21880.4 33.505 194 109 7 26 206 1 187 1.11e-26 101
Msa1329540 AT2G21880.3 33.505 194 109 7 26 206 1 187 1.11e-26 101
Msa1329540 AT5G20010.1 32.738 168 110 3 10 177 14 178 1.25e-26 102
Msa1329540 AT5G55080.1 30.270 185 122 4 7 187 11 192 3.38e-26 100
Msa1329540 AT4G09720.6 32.955 176 105 6 38 206 3 172 9.17e-25 95.9
Msa1329540 AT4G09720.5 32.955 176 105 6 38 206 3 172 9.17e-25 95.9
Msa1329540 AT4G09720.2 32.955 176 105 6 38 206 3 172 9.17e-25 95.9
Msa1329540 AT2G21880.2 32.057 209 114 8 11 206 11 204 3.12e-24 95.5
Msa1329540 AT2G44690.1 33.333 165 96 5 11 163 20 182 1.69e-23 93.6
Msa1329540 AT3G48040.1 36.364 165 91 5 11 163 10 172 8.16e-23 91.7
Msa1329540 AT4G35020.1 33.333 165 96 5 11 163 8 170 2.43e-22 90.1
Msa1329540 AT4G35020.2 33.333 165 96 5 11 163 8 170 2.43e-22 90.1
Msa1329540 AT4G35020.3 33.333 165 96 5 11 163 8 170 2.43e-22 90.1
Msa1329540 AT5G62880.1 35.758 165 92 5 11 163 10 172 1.32e-21 88.6
Msa1329540 AT3G51300.1 33.333 165 96 5 11 163 8 170 1.54e-21 88.2
Msa1329540 AT1G20090.1 32.727 165 97 5 11 163 7 169 2.52e-21 87.4
Msa1329540 AT1G75840.1 32.727 165 97 5 11 163 8 170 2.55e-21 87.4
Msa1329540 AT2G17800.2 32.727 165 97 5 11 163 8 170 2.10e-20 85.1
Msa1329540 AT2G17800.1 32.727 165 97 5 11 163 8 170 2.10e-20 85.1
Msa1329540 AT4G35950.1 32.727 165 97 5 11 163 8 170 2.59e-20 84.7
Msa1329540 AT3G48040.2 35.897 156 86 5 11 154 10 163 4.56e-20 84.0
Msa1329540 AT4G28950.1 31.902 163 99 5 11 163 8 168 8.80e-20 83.6
Msa1329540 AT5G45970.1 31.515 165 99 5 11 163 8 170 1.88e-19 82.8
Msa1329540 AT5G62880.2 35.256 156 87 5 11 154 10 163 6.65e-19 80.9
Msa1329540 AT4G35020.4 34.211 114 72 3 11 123 8 119 7.31e-15 69.3
Msa1329540 AT4G35020.5 34.211 114 72 3 11 123 8 119 7.31e-15 69.3
Msa1329540 AT5G46025.1 38.554 83 50 1 85 166 20 102 1.87e-14 67.4
Msa1329540 AT3G21700.3 25.581 172 121 3 5 170 102 272 9.36e-14 68.9
Msa1329540 AT3G51290.2 33.333 132 75 4 44 163 641 771 1.12e-13 69.7
Msa1329540 AT5G54840.1 25.904 166 115 5 11 170 103 266 2.12e-13 67.8
Msa1329540 AT3G21700.1 25.581 172 120 4 5 170 102 271 2.35e-11 62.0

Find 55 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATTGTTAAATGAATATT+TGG 0.191447 8_4:-48175361 Msa1329540:three_prime_UTR
CTGAATTACGTTAATCTAAA+TGG 0.232524 8_4:-48181166 Msa1329540:exon
CAATCCACTTTGATGTGTTT+AGG 0.293139 8_4:+48177557 None:intergenic
AGTATGATTGTATCTCTAAA+TGG 0.308860 8_4:+48175418 None:intergenic
AGCTCTCGCAAAGTACAAAT+TGG 0.308894 8_4:-48181133 Msa1329540:CDS
GTTGATAGTGTTTCCATTCC+AGG 0.321883 8_4:+48175778 None:intergenic
AATTCGACTAATTATCAAAT+AGG 0.328522 8_4:-48175387 Msa1329540:three_prime_UTR
GTCTTATTCCAAGCTACATT+AGG 0.335980 8_4:-48178344 Msa1329540:CDS
AAAATTGCTGCTGCTTTGCC+TGG 0.361096 8_4:-48175796 Msa1329540:CDS
CTTTATATTGAAGCCGGCTT+TGG 0.362026 8_4:+48176180 None:intergenic
CATTTGTTGCAATTTATAGA+AGG 0.381940 8_4:-48175449 Msa1329540:three_prime_UTR
TCTTATTCCAAGCTACATTA+GGG 0.382065 8_4:-48178343 Msa1329540:CDS
ATGTTATTGTTGTTCTTGTT+GGG 0.382429 8_4:-48177507 Msa1329540:CDS
CAAATTCGATAACACTTATC+AGG 0.389775 8_4:-48181052 Msa1329540:intron
TTCAGATTCAGATTCCGATT+TGG 0.390085 8_4:+48181184 None:intergenic
TGCTGCTGCTTTGCCTGGAA+TGG 0.398521 8_4:-48175791 Msa1329540:CDS
TACTTTGCGAGAGCTGAAAC+TGG 0.414423 8_4:+48181141 None:intergenic
TCTTCTTCCTCAAACCAAAT+CGG 0.419337 8_4:-48181198 Msa1329540:five_prime_UTR
GAACTGTTCGGCTGCAGTTA+TGG 0.433601 8_4:-48179458 Msa1329540:intron
CAAAGCCGGCTTCAATATAA+AGG 0.435143 8_4:-48176179 Msa1329540:intron
TCAGATTCCGATTTGGTTTG+AGG 0.442675 8_4:+48181191 None:intergenic
GATGTTATTGTTGTTCTTGT+TGG 0.450051 8_4:-48177508 Msa1329540:CDS
AGGCAAGTCTCCACGGAGGA+AGG 0.492452 8_4:-48176250 Msa1329540:CDS
GCAAGTCTCCACGGAGGAAG+GGG 0.501301 8_4:-48176248 Msa1329540:CDS
TTGAAGAGGTGCGCAGTGAG+AGG 0.501744 8_4:-48177537 Msa1329540:CDS
AAACTGACCTTGTGGAAAAG+AGG 0.510063 8_4:-48177480 Msa1329540:intron
GTGTACCTTTATATTGAAGC+CGG 0.511807 8_4:+48176174 None:intergenic
CATGACTCTCAACCTCAGTC+TGG 0.512275 8_4:-48175706 Msa1329540:CDS
CATGGCTGGTAGAAGACCTC+AGG 0.512690 8_4:+48175725 None:intergenic
GATTGTATCTCTAAATGGAT+TGG 0.517817 8_4:+48175423 None:intergenic
CTGTGCATGTGATGTTGTAA+TGG 0.521454 8_4:+48181245 None:intergenic
GGCAAGTCTCCACGGAGGAA+GGG 0.521811 8_4:-48176249 Msa1329540:CDS
GTGATGTTGTAATGGAAGAA+TGG 0.523860 8_4:+48181253 None:intergenic
GTGTAGGGATACAGCTGGAC+AGG 0.524147 8_4:-48178379 Msa1329540:intron
GATGAGTCCCTAATGTAGCT+TGG 0.527952 8_4:+48178336 None:intergenic
ATTGAAGCTAGTGCCAAAGC+CGG 0.545119 8_4:-48176193 Msa1329540:CDS
TGAAGAGGTGCGCAGTGAGA+GGG 0.545176 8_4:-48177536 Msa1329540:CDS
CTTTGCTTCCCCTTCCTCCG+TGG 0.556434 8_4:+48176240 None:intergenic
GAAGAGGTGCGCAGTGAGAG+GGG 0.574190 8_4:-48177535 Msa1329540:CDS
ATCTTGAAGATCGAACTGTT+CGG 0.579216 8_4:-48179470 Msa1329540:CDS
GAACAATTATAGAAAACAAG+TGG 0.583164 8_4:-48175550 Msa1329540:three_prime_UTR
GACTCTCAACCTCAGTCTGG+CGG 0.590457 8_4:-48175703 Msa1329540:CDS
CAGACTGAGGTTGAGAGTCA+TGG 0.594134 8_4:+48175707 None:intergenic
CTTTCCTAAACACATCAAAG+TGG 0.596398 8_4:-48177561 Msa1329540:CDS
ATTCTACAGGCAAGTCTCCA+CGG 0.605040 8_4:-48176257 Msa1329540:intron
CATGTGTGTAGGGATACAGC+TGG 0.611173 8_4:-48178384 Msa1329540:intron
CTGAGGTTGAGAGTCATGGC+TGG 0.612100 8_4:+48175711 None:intergenic
CACATCAAAGTGGATTGAAG+AGG 0.614834 8_4:-48177551 Msa1329540:CDS
CAAGAACATCCGCCAGACTG+AGG 0.645056 8_4:+48175694 None:intergenic
AACCACAAAACAAGAAGACA+TGG 0.648075 8_4:-48175758 Msa1329540:CDS
TTTCTCGGCGATCAATCCGT+CGG 0.655592 8_4:-48181108 Msa1329540:CDS
ACATGGTCGATGTGAACCTG+AGG 0.670721 8_4:-48175741 Msa1329540:CDS
CATGAAGCGAGTGATGATGC+TGG 0.674864 8_4:+48181080 None:intergenic
TGGGAACAAAACTGACCTTG+TGG 0.681829 8_4:-48177488 Msa1329540:CDS
CTACAGGCAAGTCTCCACGG+AGG 0.828398 8_4:-48176254 Msa1329540:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTAATAATA+AGG - chr8_4:48178584-48178603 Msa1329540:intron 0.0%
!!! TATTTTAACAAATTAACTTT+TGG - chr8_4:48177366-48177385 Msa1329540:intron 10.0%
!! AATAAAAAAATAAAAACTCA+AGG + chr8_4:48178473-48178492 None:intergenic 10.0%
!!! GTTTTTATTTTTTTATTTTC+TGG - chr8_4:48178476-48178495 Msa1329540:intron 10.0%
!!! ATTATTTGTTTCTTAAAAAA+TGG - chr8_4:48178549-48178568 Msa1329540:intron 10.0%
!!! TTATTTGTTTCTTAAAAAAT+GGG - chr8_4:48178550-48178569 Msa1329540:intron 10.0%
!!! AATACTTTTAATAAAAAAGA+GGG - chr8_4:48178817-48178836 Msa1329540:intron 10.0%
!! ATAATAATTAGTAATTAGAA+AGG + chr8_4:48179313-48179332 None:intergenic 10.0%
!!! TATTATCATTTTATCTTAAA+AGG + chr8_4:48179659-48179678 None:intergenic 10.0%
!!! TGCTTTAATTTTTTTTTTTT+TGG - chr8_4:48181037-48181056 Msa1329540:intron 10.0%
!! TAAATTGTTAAATGAATATT+TGG - chr8_4:48181296-48181315 Msa1329540:five_prime_UTR 10.0%
!! TATAGATGAAAAATTGAAAA+GGG + chr8_4:48175769-48175788 None:intergenic 15.0%
!! ATATAGATGAAAAATTGAAA+AGG + chr8_4:48175770-48175789 None:intergenic 15.0%
!!! ATTCATAATTTCTTTGAAAT+TGG + chr8_4:48175825-48175844 None:intergenic 15.0%
!! TATCTTTATGAGAAAAATTA+GGG + chr8_4:48176769-48176788 None:intergenic 15.0%
!! ATATCTTTATGAGAAAAATT+AGG + chr8_4:48176770-48176789 None:intergenic 15.0%
!! TATAAATGAATTTAGAGAAA+TGG + chr8_4:48177088-48177107 None:intergenic 15.0%
!!! ATTTGTTAAAATAATAGCAT+TGG + chr8_4:48177359-48177378 None:intergenic 15.0%
!!! CTTTAAATTTTAGAACTAAA+TGG + chr8_4:48177844-48177863 None:intergenic 15.0%
!! TTTACTTTATAGCATAAAAA+TGG - chr8_4:48177988-48178007 Msa1329540:intron 15.0%
!! TTACTTTATAGCATAAAAAT+GGG - chr8_4:48177989-48178008 Msa1329540:intron 15.0%
!! TAAATTGTTAATAAAGCAAT+AGG + chr8_4:48178406-48178425 None:intergenic 15.0%
!!! GAATACTTTTAATAAAAAAG+AGG - chr8_4:48178816-48178835 Msa1329540:intron 15.0%
!! ACTATTATTTCATTCTTTAA+AGG - chr8_4:48179409-48179428 Msa1329540:intron 15.0%
!! AGTAAAAATATTATCTAGAA+TGG - chr8_4:48179869-48179888 Msa1329540:intron 15.0%
!! ATGAAAATGATAGAAAAATG+GGG + chr8_4:48175687-48175706 None:intergenic 20.0%
!! CATGAAAATGATAGAAAAAT+GGG + chr8_4:48175688-48175707 None:intergenic 20.0%
!! TCATGAAAATGATAGAAAAA+TGG + chr8_4:48175689-48175708 None:intergenic 20.0%
!!! TTTCTTGTTATGATTTCTTA+TGG - chr8_4:48175884-48175903 Msa1329540:intron 20.0%
!! ATATTAATCCTATAACTCTA+TGG + chr8_4:48176936-48176955 None:intergenic 20.0%
!!! ACATATTTTAACACATTACA+AGG + chr8_4:48176969-48176988 None:intergenic 20.0%
!! TCTAAATTCATTTATATCTC+TGG - chr8_4:48177092-48177111 Msa1329540:intron 20.0%
!!! TAATTTGCATATTAAAGAAG+TGG + chr8_4:48177655-48177674 None:intergenic 20.0%
!! GATAATTAAATTATGATGCT+TGG + chr8_4:48177687-48177706 None:intergenic 20.0%
!! GATTTACTAAGATATTGAAT+TGG - chr8_4:48178504-48178523 Msa1329540:intron 20.0%
!!! TGTGTTATTTTTCTTTTGTT+TGG - chr8_4:48178686-48178705 Msa1329540:intron 20.0%
!!! CATGTTTTAATACTATTTCT+AGG + chr8_4:48179927-48179946 None:intergenic 20.0%
!!! GATAATATTCCTTTTATATG+TGG + chr8_4:48179969-48179988 None:intergenic 20.0%
!! TTGATGAATTTGGATAAATT+TGG - chr8_4:48179994-48180013 Msa1329540:intron 20.0%
!! ATAATTTATACAAGACAACA+AGG + chr8_4:48180165-48180184 None:intergenic 20.0%
!! TGATATTTGTAAAATATGTG+TGG + chr8_4:48180524-48180543 None:intergenic 20.0%
!! TTTATCAAACCTATTACTTT+AGG - chr8_4:48180827-48180846 Msa1329540:intron 20.0%
!!! TTTTTTTTTTGGTTGTGTAA+AGG - chr8_4:48181048-48181067 Msa1329540:intron 20.0%
!! ATAATTGTGAAAAACTTGAT+AGG - chr8_4:48181185-48181204 Msa1329540:five_prime_UTR 20.0%
!! AATTCGACTAATTATCAAAT+AGG - chr8_4:48181270-48181289 Msa1329540:five_prime_UTR 20.0%
! CTGAATTACGTTAATCTAAA+TGG - chr8_4:48175491-48175510 Msa1329540:three_prime_UTR 25.0%
!!! AAGTACAAATTGGTTTTTCT+CGG - chr8_4:48175534-48175553 Msa1329540:three_prime_UTR 25.0%
!!! GTTGAAAAAGTACTTGATAA+AGG + chr8_4:48175747-48175766 None:intergenic 25.0%
!! TTATAATTTTCCTCAGTCAA+TGG + chr8_4:48176349-48176368 None:intergenic 25.0%
! TATAATCTCTTTCAGTTATG+TGG - chr8_4:48176364-48176383 Msa1329540:intron 25.0%
!!! AACAGAAAGGTATTCATTTT+CGG + chr8_4:48176471-48176490 None:intergenic 25.0%
! CAATGTACATTCTAATACAT+AGG + chr8_4:48176656-48176675 None:intergenic 25.0%
!! TACTCATGTAAGCTAATTTT+CGG - chr8_4:48176856-48176875 Msa1329540:intron 25.0%
! GTAGCATGATAAACTTAATA+TGG + chr8_4:48177029-48177048 None:intergenic 25.0%
!! TATTTTTCCTTTTTCCTAAC+AGG - chr8_4:48177128-48177147 Msa1329540:intron 25.0%
! AACTGCAGAATATTCAAAAA+TGG + chr8_4:48177240-48177259 None:intergenic 25.0%
!! TTTTGAATATTCTGCAGTTA+CGG - chr8_4:48177241-48177260 Msa1329540:intron 25.0%
!! TCTAAAATGAAGCTATGAAT+GGG - chr8_4:48177329-48177348 Msa1329540:intron 25.0%
! ATTATGAGTTGCATCTAATA+AGG + chr8_4:48177412-48177431 None:intergenic 25.0%
! AACTAAAATAACTTCAGTGT+GGG + chr8_4:48177477-48177496 None:intergenic 25.0%
! AAACTAAAATAACTTCAGTG+TGG + chr8_4:48177478-48177497 None:intergenic 25.0%
! ATATATCTTTACATATGCTC+AGG + chr8_4:48177545-48177564 None:intergenic 25.0%
! TTTGTTTCCAATGATCTATT+TGG - chr8_4:48177735-48177754 Msa1329540:intron 25.0%
! TAGTATACCAAATAGATCAT+TGG + chr8_4:48177745-48177764 None:intergenic 25.0%
! GTTAGAATACTTAAAAGCAA+CGG + chr8_4:48177949-48177968 None:intergenic 25.0%
! TTTAATTATGAATGAGATGC+TGG - chr8_4:48178028-48178047 Msa1329540:intron 25.0%
! AAGTAAGACATAAACCAAAA+AGG + chr8_4:48178116-48178135 None:intergenic 25.0%
! GAAAAAACAGAGAAAGAAAA+GGG + chr8_4:48178766-48178785 None:intergenic 25.0%
!!! TCTTGAGAATTTCTAGTTTT+TGG + chr8_4:48178918-48178937 None:intergenic 25.0%
! TAAAATTGGCAATGGATAAT+AGG + chr8_4:48178965-48178984 None:intergenic 25.0%
! GAAATTCATAAAATTGGCAA+TGG + chr8_4:48178973-48178992 None:intergenic 25.0%
! TCCAGAGAAATTCATAAAAT+TGG + chr8_4:48178979-48178998 None:intergenic 25.0%
!! ATGTTATTGTTGTTCTTGTT+GGG - chr8_4:48179150-48179169 Msa1329540:intron 25.0%
! AGGTAATGAATAATCAATTG+TGG - chr8_4:48179197-48179216 Msa1329540:intron 25.0%
! GGAGGATAATTAATGTTTAA+TGG - chr8_4:48179506-48179525 Msa1329540:CDS 25.0%
! TATGAAGTTCCTAACTAAAT+AGG - chr8_4:48179555-48179574 Msa1329540:intron 25.0%
! TAACTATCACCTATTTAGTT+AGG + chr8_4:48179567-48179586 None:intergenic 25.0%
! TTTATCCAAATTCATCAAGT+CGG + chr8_4:48179992-48180011 None:intergenic 25.0%
! ATTATCTATAGCATCTCATT+GGG + chr8_4:48180308-48180327 None:intergenic 25.0%
! AATTATCTATAGCATCTCAT+TGG + chr8_4:48180309-48180328 None:intergenic 25.0%
! TATTCTTTACATGATTCTAC+AGG - chr8_4:48180387-48180406 Msa1329540:intron 25.0%
! TGTGGAAAATTGTAATAAGT+TGG + chr8_4:48180706-48180725 None:intergenic 25.0%
! GAACAATTATAGAAAACAAG+TGG - chr8_4:48181107-48181126 Msa1329540:CDS 25.0%
!! CATTTGTTGCAATTTATAGA+AGG - chr8_4:48181208-48181227 Msa1329540:five_prime_UTR 25.0%
! AGTATGATTGTATCTCTAAA+TGG + chr8_4:48181242-48181261 None:intergenic 25.0%
CAAATTCGATAACACTTATC+AGG - chr8_4:48175605-48175624 Msa1329540:three_prime_UTR 30.0%
AAATGAGAATGGATCTGAAA+TGG + chr8_4:48175633-48175652 None:intergenic 30.0%
TATAGCTCAAAATCACAGAT+TGG + chr8_4:48175994-48176013 None:intergenic 30.0%
AGTTTGGATAAGTATGTGTT+GGG - chr8_4:48176154-48176173 Msa1329540:intron 30.0%
ATTGACATTTGAGAGAGTTA+GGG - chr8_4:48176672-48176691 Msa1329540:intron 30.0%
! ATTAGCTTACATGAGTACAA+AGG + chr8_4:48176853-48176872 None:intergenic 30.0%
ATCCTATAACTCTATGGTTA+GGG + chr8_4:48176930-48176949 None:intergenic 30.0%
AATCCTATAACTCTATGGTT+AGG + chr8_4:48176931-48176950 None:intergenic 30.0%
ATAAACATTAGAAGGAAGGA+AGG + chr8_4:48177002-48177021 None:intergenic 30.0%
TTCCTTCCTTCTAATGTTTA+TGG - chr8_4:48177001-48177020 Msa1329540:intron 30.0%
ATCCATAAACATTAGAAGGA+AGG + chr8_4:48177006-48177025 None:intergenic 30.0%
ATGGATCCATAAACATTAGA+AGG + chr8_4:48177010-48177029 None:intergenic 30.0%
ATTAAGTTTATCATGCTACC+AGG - chr8_4:48177030-48177049 Msa1329540:intron 30.0%
! AAGATTTTCATAAGACAACC+TGG + chr8_4:48177051-48177070 None:intergenic 30.0%
CATTAGGGAAGAAAATAGAA+GGG - chr8_4:48177274-48177293 Msa1329540:intron 30.0%
ATTAGGGAAGAAAATAGAAG+GGG - chr8_4:48177275-48177294 Msa1329540:intron 30.0%
! GTCTAAAATGAAGCTATGAA+TGG - chr8_4:48177328-48177347 Msa1329540:intron 30.0%
AGAAGTGGATGAGAATAAAA+AGG + chr8_4:48177640-48177659 None:intergenic 30.0%
! TTATTCCTACTTTGCCTTTT+TGG - chr8_4:48178099-48178118 Msa1329540:intron 30.0%
ATAAACCAAAAAGGCAAAGT+AGG + chr8_4:48178107-48178126 None:intergenic 30.0%
CTGTAATGCTTATATATGGA+TGG + chr8_4:48178197-48178216 None:intergenic 30.0%
ACTGCTGTAATGCTTATATA+TGG + chr8_4:48178201-48178220 None:intergenic 30.0%
TCTTATTCCAAGCTACATTA+GGG - chr8_4:48178314-48178333 Msa1329540:CDS 30.0%
CTCAAAGGAATAACACTTAA+AGG + chr8_4:48178620-48178639 None:intergenic 30.0%
! TCCAGTTTTCACATTTTCAA+GGG - chr8_4:48178725-48178744 Msa1329540:intron 30.0%
GGAAAAAACAGAGAAAGAAA+AGG + chr8_4:48178767-48178786 None:intergenic 30.0%
TAATGTAGGCTAACAAAGAA+GGG + chr8_4:48178788-48178807 None:intergenic 30.0%
TTAATGTAGGCTAACAAAGA+AGG + chr8_4:48178789-48178808 None:intergenic 30.0%
GTATTCACTCACTTTAATGT+AGG + chr8_4:48178802-48178821 None:intergenic 30.0%
TAAAAAAGAGGGAGTGAATA+TGG - chr8_4:48178828-48178847 Msa1329540:intron 30.0%
GTGAATATGGAAAGAAAATG+TGG - chr8_4:48178841-48178860 Msa1329540:intron 30.0%
! GCCAATTTTATGAATTTCTC+TGG - chr8_4:48178975-48178994 Msa1329540:intron 30.0%
! GATGTTATTGTTGTTCTTGT+TGG - chr8_4:48179149-48179168 Msa1329540:intron 30.0%
TATAAGCTATCTGTTAGAGT+AGG + chr8_4:48179224-48179243 None:intergenic 30.0%
CTCTAACAGATAGCTTATAT+TGG - chr8_4:48179225-48179244 Msa1329540:intron 30.0%
AAGGAAAAAAATGCAAAACG+AGG + chr8_4:48179294-48179313 None:intergenic 30.0%
CAAGACATAGAGAAAGTTTA+CGG - chr8_4:48179339-48179358 Msa1329540:intron 30.0%
AAGACATAGAGAAAGTTTAC+GGG - chr8_4:48179340-48179359 Msa1329540:intron 30.0%
! CAATTTAAGGCTTGAAAAAG+CGG + chr8_4:48179594-48179613 None:intergenic 30.0%
! GGAATTCTAGAGACAATTTA+AGG + chr8_4:48179607-48179626 None:intergenic 30.0%
CGTAAATAGAAAGGGTTATA+CGG + chr8_4:48179700-48179719 None:intergenic 30.0%
TAATGCAGCGTAAATAGAAA+GGG + chr8_4:48179708-48179727 None:intergenic 30.0%
GAGAAAATTATGCAAGAATC+TGG - chr8_4:48179728-48179747 Msa1329540:intron 30.0%
AGAGATATATCCAGTGAAAA+GGG - chr8_4:48179837-48179856 Msa1329540:intron 30.0%
TTATCCAAATTCATCAAGTC+GGG + chr8_4:48179991-48180010 None:intergenic 30.0%
TAATTCCTTGCACTTATCTT+AGG + chr8_4:48180035-48180054 None:intergenic 30.0%
! TTATGACACCCTTATGATTT+TGG - chr8_4:48180217-48180236 Msa1329540:intron 30.0%
GGGAACTATAAATATAGAGT+AGG + chr8_4:48180288-48180307 None:intergenic 30.0%
!!! ATTTGCTTGTTTTACATACC+TGG - chr8_4:48180781-48180800 Msa1329540:intron 30.0%
!! AACTTTTCAAGACAACAACA+AGG + chr8_4:48180998-48181017 None:intergenic 30.0%
GATTGTATCTCTAAATGGAT+TGG + chr8_4:48181237-48181256 None:intergenic 30.0%
! GTGATGTTGTAATGGAAGAA+TGG + chr8_4:48175407-48175426 None:intergenic 35.0%
TCTTCTTCCTCAAACCAAAT+CGG - chr8_4:48175459-48175478 Msa1329540:three_prime_UTR 35.0%
TTCAGATTCAGATTCCGATT+TGG + chr8_4:48175476-48175495 None:intergenic 35.0%
GAAAAGGACGAAAATGAGAA+TGG + chr8_4:48175644-48175663 None:intergenic 35.0%
GTTTCATCGATCAAATCATG+AGG + chr8_4:48175953-48175972 None:intergenic 35.0%
GAGTTTGGATAAGTATGTGT+TGG - chr8_4:48176153-48176172 Msa1329540:intron 35.0%
! AGTATGTGTTGGGTTGTTTA+AGG - chr8_4:48176164-48176183 Msa1329540:intron 35.0%
! GTATGTGTTGGGTTGTTTAA+GGG - chr8_4:48176165-48176184 Msa1329540:intron 35.0%
GGTTGTTTAAGGGATTGTTT+GGG - chr8_4:48176175-48176194 Msa1329540:intron 35.0%
!! TTCAGTGGATGTGTTTTTGT+CGG - chr8_4:48176231-48176250 Msa1329540:CDS 35.0%
ATTATGAAGTGAGTAGGACT+TGG - chr8_4:48176257-48176276 Msa1329540:intron 35.0%
!!! TCAAGAAGGTTTTGAAGAGA+AGG - chr8_4:48176312-48176331 Msa1329540:intron 35.0%
!!! CAAGAAGGTTTTGAAGAGAA+GGG - chr8_4:48176313-48176332 Msa1329540:intron 35.0%
!! TCGTTGCGAGTTGATTAAAA+AGG + chr8_4:48176442-48176461 None:intergenic 35.0%
TAGCTCTCAAGAAAACAGAA+AGG + chr8_4:48176484-48176503 None:intergenic 35.0%
ATGATCCCAAAGTGAAAACA+CGG + chr8_4:48176520-48176539 None:intergenic 35.0%
!!! TGTTTTCACTTTGGGATCAT+AGG - chr8_4:48176520-48176539 Msa1329540:intron 35.0%
CATTGACATTTGAGAGAGTT+AGG - chr8_4:48176671-48176690 Msa1329540:intron 35.0%
CCAAGTAGATCTGATAGAAA+CGG + chr8_4:48176793-48176812 None:intergenic 35.0%
AACCCTAACCATAGAGTTAT+AGG - chr8_4:48176925-48176944 Msa1329540:intron 35.0%
ATTGTAGCCTGTTAGGAAAA+AGG + chr8_4:48177138-48177157 None:intergenic 35.0%
! TTTTCCTAACAGGCTACAAT+CGG - chr8_4:48177138-48177157 Msa1329540:intron 35.0%
ATCTTGAAGATCGAACTGTT+CGG - chr8_4:48177187-48177206 Msa1329540:intron 35.0%
GCATTAGGGAAGAAAATAGA+AGG - chr8_4:48177273-48177292 Msa1329540:intron 35.0%
TTAGGGAAGAAAATAGAAGG+GGG - chr8_4:48177276-48177295 Msa1329540:intron 35.0%
! TGTTATCTTGAGCTTTTGAC+TGG - chr8_4:48177500-48177519 Msa1329540:CDS 35.0%
GTGGATGAGAATAAAAAGGA+TGG + chr8_4:48177636-48177655 None:intergenic 35.0%
! AAAGTCTTTTGCCTTTGTCT+CGG - chr8_4:48177860-48177879 Msa1329540:intron 35.0%
CAGTGAGATTCAGAACTAAA+TGG + chr8_4:48177913-48177932 None:intergenic 35.0%
ACTTAAAAGCAACGGCAAAT+GGG + chr8_4:48177941-48177960 None:intergenic 35.0%
TACTTAAAAGCAACGGCAAA+TGG + chr8_4:48177942-48177961 None:intergenic 35.0%
ATGTTGGAATCTGCAACATT+TGG - chr8_4:48178056-48178075 Msa1329540:intron 35.0%
TGTTGGAATCTGCAACATTT+GGG - chr8_4:48178057-48178076 Msa1329540:intron 35.0%
CATATTGACAAACTAGAGTG+AGG - chr8_4:48178156-48178175 Msa1329540:intron 35.0%
AATTTGTGTTCCATGTGTGT+AGG - chr8_4:48178262-48178281 Msa1329540:intron 35.0%
ATTTGTGTTCCATGTGTGTA+GGG - chr8_4:48178263-48178282 Msa1329540:intron 35.0%
! GTCTTATTCCAAGCTACATT+AGG - chr8_4:48178313-48178332 Msa1329540:CDS 35.0%
TCCTTTGAGCAATATGTATG+TGG - chr8_4:48178631-48178650 Msa1329540:intron 35.0%
! GTCCAGTTTTCACATTTTCA+AGG - chr8_4:48178724-48178743 Msa1329540:intron 35.0%
AAAACAGAGAAAGAAAAGGG+AGG + chr8_4:48178763-48178782 None:intergenic 35.0%
CAGTATCACCTAATTGATAG+AGG + chr8_4:48178890-48178909 None:intergenic 35.0%
!! TTCACTTTTCAAGAACACTG+TGG - chr8_4:48179028-48179047 Msa1329540:intron 35.0%
!! TCACTTTTCAAGAACACTGT+GGG - chr8_4:48179029-48179048 Msa1329540:intron 35.0%
ACTCCGTATTCTTATGATGT+AGG - chr8_4:48179065-48179084 Msa1329540:intron 35.0%
CGACCTACATCATAAGAATA+CGG + chr8_4:48179071-48179090 None:intergenic 35.0%
CTTTCCTAAACACATCAAAG+TGG - chr8_4:48179096-48179115 Msa1329540:intron 35.0%
CAATCCACTTTGATGTGTTT+AGG + chr8_4:48179103-48179122 None:intergenic 35.0%
! TTCATTACCTCTTTTCCACA+AGG + chr8_4:48179187-48179206 None:intergenic 35.0%
! TCATTCTTTAAAGGCAAGAC+TGG - chr8_4:48179418-48179437 Msa1329540:intron 35.0%
! CATTCTTTAAAGGCAAGACT+GGG - chr8_4:48179419-48179438 Msa1329540:intron 35.0%
AAAAATCGCCAAGCATTCAA+AGG - chr8_4:48179485-48179504 Msa1329540:CDS 35.0%
ATTATCCTCCTTTGAATGCT+TGG + chr8_4:48179496-48179515 None:intergenic 35.0%
AATTGAGTCGATCATTCTCA+AGG + chr8_4:48179628-48179647 None:intergenic 35.0%
ATACGGATGTCTGATATATG+AGG + chr8_4:48179683-48179702 None:intergenic 35.0%
CTAATGCAGCGTAAATAGAA+AGG + chr8_4:48179709-48179728 None:intergenic 35.0%
!!! CAAGAATCTGGTTTTACTGA+AGG - chr8_4:48179740-48179759 Msa1329540:intron 35.0%
!! TAAAGCCCAAAAAAGTACCA+GGG + chr8_4:48179775-48179794 None:intergenic 35.0%
!! ATAAAGCCCAAAAAAGTACC+AGG + chr8_4:48179776-48179795 None:intergenic 35.0%
GAGAGATATATCCAGTGAAA+AGG - chr8_4:48179836-48179855 Msa1329540:intron 35.0%
TTATATGTGGTCTTCAGCAA+GGG + chr8_4:48179956-48179975 None:intergenic 35.0%
TTTATATGTGGTCTTCAGCA+AGG + chr8_4:48179957-48179976 None:intergenic 35.0%
TGCTGAAGACCACATATAAA+AGG - chr8_4:48179957-48179976 Msa1329540:intron 35.0%
! TTATCCCGACTTGATGAATT+TGG - chr8_4:48179984-48180003 Msa1329540:intron 35.0%
ATCATCCTAAGATAAGTGCA+AGG - chr8_4:48180027-48180046 Msa1329540:intron 35.0%
ACTAAAGCCAGGAGAAATAT+TGG + chr8_4:48180096-48180115 None:intergenic 35.0%
TTTGGGTGCCAAAATCATAA+GGG + chr8_4:48180228-48180247 None:intergenic 35.0%
AATCTTGCAAAGTCACCTTT+GGG + chr8_4:48180245-48180264 None:intergenic 35.0%
AAATCTTGCAAAGTCACCTT+TGG + chr8_4:48180246-48180265 None:intergenic 35.0%
! AATCTAGGATAAAAGAGGTG+AGG - chr8_4:48180343-48180362 Msa1329540:intron 35.0%
GTGTACCTTTATATTGAAGC+CGG + chr8_4:48180486-48180505 None:intergenic 35.0%
AATATGTGTGGCAACAGAAA+GGG + chr8_4:48180512-48180531 None:intergenic 35.0%
AAATATGTGTGGCAACAGAA+AGG + chr8_4:48180513-48180532 None:intergenic 35.0%
AAGACAATGCTAGGCAATTT+AGG + chr8_4:48180569-48180588 None:intergenic 35.0%
TAAATTGCCTAGCATTGTCT+TGG - chr8_4:48180568-48180587 Msa1329540:intron 35.0%
AAATTGCCTAGCATTGTCTT+GGG - chr8_4:48180569-48180588 Msa1329540:intron 35.0%
TGCAAAGTGCAATCAAAAGT+TGG - chr8_4:48180667-48180686 Msa1329540:intron 35.0%
GCATACAAGAAGCTAATTTG+TGG + chr8_4:48180724-48180743 None:intergenic 35.0%
!! TTGTTTTACATACCTGGTCT+TGG - chr8_4:48180787-48180806 Msa1329540:intron 35.0%
TCAAATTAAATGCCAAGACC+AGG + chr8_4:48180802-48180821 None:intergenic 35.0%
AACCACAAAACAAGAAGACA+TGG - chr8_4:48180899-48180918 Msa1329540:intron 35.0%
CTGTGCATGTGATGTTGTAA+TGG + chr8_4:48175415-48175434 None:intergenic 40.0%
!! TCAGATTCCGATTTGGTTTG+AGG + chr8_4:48175469-48175488 None:intergenic 40.0%
AGCTCTCGCAAAGTACAAAT+TGG - chr8_4:48175524-48175543 Msa1329540:three_prime_UTR 40.0%
GCTCAAAATCACAGATTGGT+TGG + chr8_4:48175990-48176009 None:intergenic 40.0%
GAGCTATAGTTTATGCTCGT+CGG - chr8_4:48176006-48176025 Msa1329540:intron 40.0%
AGTCATTCGACGAATCTTGA+AGG - chr8_4:48176049-48176068 Msa1329540:intron 40.0%
GTCATTCGACGAATCTTGAA+GGG - chr8_4:48176050-48176069 Msa1329540:intron 40.0%
TGCGAAGATTCAGAAGATGT+TGG - chr8_4:48176123-48176142 Msa1329540:intron 40.0%
GCGAAGATTCAGAAGATGTT+GGG - chr8_4:48176124-48176143 Msa1329540:intron 40.0%
CGAAGATTCAGAAGATGTTG+GGG - chr8_4:48176125-48176144 Msa1329540:intron 40.0%
GAAGATTCAGAAGATGTTGG+GGG - chr8_4:48176126-48176145 Msa1329540:intron 40.0%
GGGTTGTTTAAGGGATTGTT+TGG - chr8_4:48176174-48176193 Msa1329540:intron 40.0%
GACTATATAGTGATGCAGTG+TGG - chr8_4:48176197-48176216 Msa1329540:CDS 40.0%
!! TCAGTGGATGTGTTTTTGTC+GGG - chr8_4:48176232-48176251 Msa1329540:CDS 40.0%
! AGAGATCCGTGTTTTCACTT+TGG - chr8_4:48176511-48176530 Msa1329540:intron 40.0%
! GAGATCCGTGTTTTCACTTT+GGG - chr8_4:48176512-48176531 Msa1329540:intron 40.0%
!! TTCCTCATTAACTGACTTGC+CGG - chr8_4:48176586-48176605 Msa1329540:intron 40.0%
CCGTTTCTATCAGATCTACT+TGG - chr8_4:48176790-48176809 Msa1329540:intron 40.0%
GCTTACATGAGTACAAAGGT+AGG + chr8_4:48176849-48176868 None:intergenic 40.0%
AACTCTATGGTTAGGGTTGT+AGG + chr8_4:48176923-48176942 None:intergenic 40.0%
! AATACCGATTGTAGCCTGTT+AGG + chr8_4:48177145-48177164 None:intergenic 40.0%
AATATTCTGCAGTTACGGTG+AGG - chr8_4:48177246-48177265 Msa1329540:intron 40.0%
TAGGGAAGAAAATAGAAGGG+GGG - chr8_4:48177277-48177296 Msa1329540:intron 40.0%
CATAGCTTTCATGCAAGTGA+GGG - chr8_4:48177596-48177615 Msa1329540:intron 40.0%
CTGATTTATGTCCGAGACAA+AGG + chr8_4:48177874-48177893 None:intergenic 40.0%
CTCGGACATAAATCAGATTC+TGG - chr8_4:48177878-48177897 Msa1329540:intron 40.0%
GTTGGAATCTGCAACATTTG+GGG - chr8_4:48178058-48178077 Msa1329540:intron 40.0%
GCCACATACATATTGCTCAA+AGG + chr8_4:48178635-48178654 None:intergenic 40.0%
GCCCTTGAAAATGTGAAAAC+TGG + chr8_4:48178729-48178748 None:intergenic 40.0%
!! CACATCAAAGTGGATTGAAG+AGG - chr8_4:48179106-48179125 Msa1329540:intron 40.0%
AAACTGACCTTGTGGAAAAG+AGG - chr8_4:48179177-48179196 Msa1329540:intron 40.0%
! GCTTATATTGGTCTGCTTCA+TGG - chr8_4:48179237-48179256 Msa1329540:intron 40.0%
TTAAAGGCAAGACTGGGATA+TGG - chr8_4:48179425-48179444 Msa1329540:intron 40.0%
TAAAGGCAAGACTGGGATAT+GGG - chr8_4:48179426-48179445 Msa1329540:intron 40.0%
!!! CATTGCCCTGGTACTTTTTT+GGG - chr8_4:48179767-48179786 Msa1329540:intron 40.0%
!!! GGCTTTGTGCATTTTTTGTG+TGG - chr8_4:48179890-48179909 Msa1329540:intron 40.0%
AAGGAGACCAATATTTCTCC+TGG - chr8_4:48180086-48180105 Msa1329540:intron 40.0%
CTTTAGTAGCGTGAATAGGT+TGG - chr8_4:48180109-48180128 Msa1329540:intron 40.0%
! ACACAGACGAAGTATCACAA+TGG + chr8_4:48180135-48180154 None:intergenic 40.0%
CTTTGGGTGCCAAAATCATA+AGG + chr8_4:48180229-48180248 None:intergenic 40.0%
!! CTTATGATTTTGGCACCCAA+AGG - chr8_4:48180227-48180246 Msa1329540:intron 40.0%
! CTTTATATTGAAGCCGGCTT+TGG + chr8_4:48180480-48180499 None:intergenic 40.0%
! CAAAGCCGGCTTCAATATAA+AGG - chr8_4:48180478-48180497 Msa1329540:intron 40.0%
ATATGTGTGGCAACAGAAAG+GGG + chr8_4:48180511-48180530 None:intergenic 40.0%
CTTGGGTGAGATGTTTCAAA+TGG - chr8_4:48180586-48180605 Msa1329540:intron 40.0%
!! AGCAGCAATTTTTCGGAACA+GGG + chr8_4:48180853-48180872 None:intergenic 40.0%
! GCAAAGCAGCAGCAATTTTT+CGG + chr8_4:48180860-48180879 None:intergenic 40.0%
!! GTTGATAGTGTTTCCATTCC+AGG + chr8_4:48180882-48180901 None:intergenic 40.0%
!!! GACCATGTCTTCTTGTTTTG+TGG + chr8_4:48180904-48180923 None:intergenic 40.0%
TACTTTGCGAGAGCTGAAAC+TGG + chr8_4:48175519-48175538 None:intergenic 45.0%
!!! GATGATGCTGGTTTTACCGA+CGG + chr8_4:48175568-48175587 None:intergenic 45.0%
TTCGTGCGATCTGAGTGAAA+AGG + chr8_4:48175660-48175679 None:intergenic 45.0%
AGATTCGTCGAATGACTCAC+CGG + chr8_4:48176046-48176065 None:intergenic 45.0%
TTCGACGAATCTTGAAGGGT+TGG - chr8_4:48176054-48176073 Msa1329540:intron 45.0%
! GATTGCAATGGAGTTGGCTT+TGG - chr8_4:48176081-48176100 Msa1329540:intron 45.0%
!! CAGTGGATGTGTTTTTGTCG+GGG - chr8_4:48176233-48176252 Msa1329540:CDS 45.0%
CGGGGAATTATGAAGTGAGT+AGG - chr8_4:48176251-48176270 Msa1329540:CDS 45.0%
GAGTAGGACTTGGATGAGTT+CGG - chr8_4:48176267-48176286 Msa1329540:intron 45.0%
GACTTGGATGAGTTCGGTTA+TGG - chr8_4:48176273-48176292 Msa1329540:intron 45.0%
!!! GAAGGTTTTGAAGAGAAGGG+TGG - chr8_4:48176316-48176335 Msa1329540:intron 45.0%
!! TCCTCATTAACTGACTTGCC+GGG - chr8_4:48176587-48176606 Msa1329540:intron 45.0%
AGTTAGGGCCTTTGAGCATT+GGG - chr8_4:48176687-48176706 Msa1329540:intron 45.0%
ATGCACTTCCCAATGCTCAA+AGG + chr8_4:48176698-48176717 None:intergenic 45.0%
CTATGGTTAGGGTTGTAGGA+GGG + chr8_4:48176919-48176938 None:intergenic 45.0%
TCTATGGTTAGGGTTGTAGG+AGG + chr8_4:48176920-48176939 None:intergenic 45.0%
GCTGCAGTTATGGTAAGATG+TGG - chr8_4:48177209-48177228 Msa1329540:intron 45.0%
TTACGGTGAGGAATGGCATT+AGG - chr8_4:48177258-48177277 Msa1329540:intron 45.0%
TACGGTGAGGAATGGCATTA+GGG - chr8_4:48177259-48177278 Msa1329540:intron 45.0%
AGGGAAGAAAATAGAAGGGG+GGG - chr8_4:48177278-48177297 Msa1329540:intron 45.0%
GCATAGCTTTCATGCAAGTG+AGG - chr8_4:48177595-48177614 Msa1329540:intron 45.0%
TGAGATGCTGGAAGTCATGT+TGG - chr8_4:48178040-48178059 Msa1329540:intron 45.0%
GATGAGTCCCTAATGTAGCT+TGG + chr8_4:48178324-48178343 None:intergenic 45.0%
AGAAAGAAAAGGGAGGAGGA+AGG + chr8_4:48178756-48178775 None:intergenic 45.0%
ACAGAGAAAGAAAAGGGAGG+AGG + chr8_4:48178760-48178779 None:intergenic 45.0%
!! TGGAGGCACCTCTATCAATT+AGG - chr8_4:48178879-48178898 Msa1329540:intron 45.0%
TGGCAATGGATAATAGGCAG+CGG + chr8_4:48178959-48178978 None:intergenic 45.0%
TGGGAACAAAACTGACCTTG+TGG - chr8_4:48179169-48179188 Msa1329540:intron 45.0%
AATCGCCAAGCATTCAAAGG+AGG - chr8_4:48179488-48179507 Msa1329540:CDS 45.0%
!!! GCATTGCCCTGGTACTTTTT+TGG - chr8_4:48179766-48179785 Msa1329540:intron 45.0%
TATCCAGTGAAAAGGGAGCA+AGG - chr8_4:48179844-48179863 Msa1329540:intron 45.0%
CCTTCTCGTAGTACTATCAC+AGG + chr8_4:48180070-48180089 None:intergenic 45.0%
CCTGTGATAGTACTACGAGA+AGG - chr8_4:48180067-48180086 Msa1329540:intron 45.0%
CTATTCACGCTACTAAAGCC+AGG + chr8_4:48180107-48180126 None:intergenic 45.0%
!! CTGGCTTTAGTAGCGTGAAT+AGG - chr8_4:48180105-48180124 Msa1329540:intron 45.0%
ATTCTACAGGCAAGTCTCCA+CGG - chr8_4:48180400-48180419 Msa1329540:intron 45.0%
ATTGAAGCTAGTGCCAAAGC+CGG - chr8_4:48180464-48180483 Msa1329540:intron 45.0%
ATCTCACCCAAGACAATGCT+AGG + chr8_4:48180578-48180597 None:intergenic 45.0%
GGAACAGGGCCTAAAGTAAT+AGG + chr8_4:48180839-48180858 None:intergenic 45.0%
!! CAGCAGCAATTTTTCGGAAC+AGG + chr8_4:48180854-48180873 None:intergenic 45.0%
!! AAAATTGCTGCTGCTTTGCC+TGG - chr8_4:48180861-48180880 Msa1329540:intron 45.0%
!! ATATATAAAAATACTAAATT+TGG - chr8_4:48177559-48177578 Msa1329540:CDS 5.0%
!! TATATAAAAATACTAAATTT+GGG - chr8_4:48177560-48177579 Msa1329540:CDS 5.0%
TTTCTCGGCGATCAATCCGT+CGG - chr8_4:48175549-48175568 Msa1329540:three_prime_UTR 50.0%
! CATGAAGCGAGTGATGATGC+TGG + chr8_4:48175580-48175599 None:intergenic 50.0%
!! TTTATGCTCGTCGGCTCTTC+CGG - chr8_4:48176015-48176034 Msa1329540:intron 50.0%
GAATGACTCACCGGAATCAC+CGG + chr8_4:48176037-48176056 None:intergenic 50.0%
!! AGGGTTGGCTGTGATTGCAA+TGG - chr8_4:48176069-48176088 Msa1329540:intron 50.0%
GGCTGTGATTGCAATGGAGT+TGG - chr8_4:48176075-48176094 Msa1329540:intron 50.0%
GATGTTGGGGGATGAGAGTT+TGG - chr8_4:48176138-48176157 Msa1329540:intron 50.0%
GTGGACGATAGTGAGTTCAG+TGG - chr8_4:48176216-48176235 Msa1329540:CDS 50.0%
GCTGCATCAACGTGTCAAGA+AGG - chr8_4:48176298-48176317 Msa1329540:intron 50.0%
! TGGAGTTTCGCCATTGACTG+AGG - chr8_4:48176336-48176355 Msa1329540:intron 50.0%
CACTACATTTGCAGCCACAG+GGG + chr8_4:48176419-48176438 None:intergenic 50.0%
GCACTACATTTGCAGCCACA+GGG + chr8_4:48176420-48176439 None:intergenic 50.0%
!! CCTCATTAACTGACTTGCCG+GGG - chr8_4:48176588-48176607 Msa1329540:intron 50.0%
CTAGTCATACTCCTAGTCCC+CGG + chr8_4:48176608-48176627 None:intergenic 50.0%
GAGTTAGGGCCTTTGAGCAT+TGG - chr8_4:48176686-48176705 Msa1329540:intron 50.0%
GAACTGTTCGGCTGCAGTTA+TGG - chr8_4:48177199-48177218 Msa1329540:intron 50.0%
TCTGCAGTTACGGTGAGGAA+TGG - chr8_4:48177251-48177270 Msa1329540:intron 50.0%
GGGAAGAAAATAGAAGGGGG+GGG - chr8_4:48177279-48177298 Msa1329540:intron 50.0%
GGAAGAAAATAGAAGGGGGG+GGG - chr8_4:48177280-48177299 Msa1329540:intron 50.0%
GAAGAAAATAGAAGGGGGGG+GGG - chr8_4:48177281-48177300 Msa1329540:intron 50.0%
AAGAAAATAGAAGGGGGGGG+GGG - chr8_4:48177282-48177301 Msa1329540:intron 50.0%
CAGCTGTATCCCTACACACA+TGG + chr8_4:48178275-48178294 None:intergenic 50.0%
CATGTGTGTAGGGATACAGC+TGG - chr8_4:48178273-48178292 Msa1329540:intron 50.0%
! TGACCTTGCTCCCTTTTCAC+TGG + chr8_4:48179850-48179869 None:intergenic 50.0%
ACATGGTCGATGTGAACCTG+AGG - chr8_4:48180916-48180935 Msa1329540:intron 50.0%
CAGACTGAGGTTGAGAGTCA+TGG + chr8_4:48180953-48180972 None:intergenic 50.0%
CATGACTCTCAACCTCAGTC+TGG - chr8_4:48180951-48180970 Msa1329540:intron 50.0%
CATCCATTTGTCCACCCCTG+TGG - chr8_4:48176402-48176421 Msa1329540:intron 55.0%
TACATTTGCAGCCACAGGGG+TGG + chr8_4:48176416-48176435 None:intergenic 55.0%
GGCACTACATTTGCAGCCAC+AGG + chr8_4:48176421-48176440 None:intergenic 55.0%
CCCCGGCAAGTCAGTTAATG+AGG + chr8_4:48176591-48176610 None:intergenic 55.0%
!! TAACTGACTTGCCGGGGACT+AGG - chr8_4:48176594-48176613 Msa1329540:intron 55.0%
AGAAAATAGAAGGGGGGGGG+GGG - chr8_4:48177283-48177302 Msa1329540:intron 55.0%
GTGTAGGGATACAGCTGGAC+AGG - chr8_4:48178278-48178297 Msa1329540:intron 55.0%
TGTGGCCTTCCTCAGTGTGT+TGG - chr8_4:48178859-48178878 Msa1329540:intron 55.0%
TGCCTCCAACACACTGAGGA+AGG + chr8_4:48178867-48178886 None:intergenic 55.0%
GGATAATAGGCAGCGGCTGT+TGG + chr8_4:48178952-48178971 None:intergenic 55.0%
! TTGAAGAGGTGCGCAGTGAG+AGG - chr8_4:48179120-48179139 Msa1329540:intron 55.0%
! TGAAGAGGTGCGCAGTGAGA+GGG - chr8_4:48179121-48179140 Msa1329540:intron 55.0%
ACTGAAGGACTGCATTGCCC+TGG - chr8_4:48179755-48179774 Msa1329540:intron 55.0%
TGTGTGGCAACAGAAAGGGG+AGG + chr8_4:48180508-48180527 None:intergenic 55.0%
!! TGCTGCTGCTTTGCCTGGAA+TGG - chr8_4:48180866-48180885 Msa1329540:intron 55.0%
CATGGCTGGTAGAAGACCTC+AGG + chr8_4:48180935-48180954 None:intergenic 55.0%
CTGAGGTTGAGAGTCATGGC+TGG + chr8_4:48180949-48180968 None:intergenic 55.0%
GACTCTCAACCTCAGTCTGG+CGG - chr8_4:48180954-48180973 Msa1329540:intron 55.0%
CAAGAACATCCGCCAGACTG+AGG + chr8_4:48180966-48180985 None:intergenic 55.0%
! GTCGGCTCTTCCGGTGATTC+CGG - chr8_4:48176024-48176043 Msa1329540:intron 60.0%
CAGCCACAGGGGTGGACAAA+TGG + chr8_4:48176408-48176427 None:intergenic 60.0%
GAAAATAGAAGGGGGGGGGG+GGG - chr8_4:48177284-48177303 Msa1329540:intron 60.0%
AAAATAGAAGGGGGGGGGGG+GGG - chr8_4:48177285-48177304 Msa1329540:intron 60.0%
! GGTGCAAGGGGCGCATTGTT+TGG - chr8_4:48177306-48177325 Msa1329540:intron 60.0%
GGCCTTCCTCAGTGTGTTGG+AGG - chr8_4:48178862-48178881 Msa1329540:intron 60.0%
! GAGGTGCCTCCAACACACTG+AGG + chr8_4:48178871-48178890 None:intergenic 60.0%
AGGCAGCGGCTGTTGGAGAA+AGG + chr8_4:48178945-48178964 None:intergenic 60.0%
! GAAGAGGTGCGCAGTGAGAG+GGG - chr8_4:48179122-48179141 Msa1329540:intron 60.0%
CTACAGGCAAGTCTCCACGG+AGG - chr8_4:48180403-48180422 Msa1329540:intron 60.0%
AGGCAAGTCTCCACGGAGGA+AGG - chr8_4:48180407-48180426 Msa1329540:intron 60.0%
GGCAAGTCTCCACGGAGGAA+GGG - chr8_4:48180408-48180427 Msa1329540:intron 60.0%
GCAAGTCTCCACGGAGGAAG+GGG - chr8_4:48180409-48180428 Msa1329540:intron 60.0%
CTTTGCTTCCCCTTCCTCCG+TGG + chr8_4:48180420-48180439 None:intergenic 60.0%
!! AAGGGGGGGGGGGGGGTGCA+AGG - chr8_4:48177292-48177311 Msa1329540:intron 80.0%
!! AGGGGGGGGGGGGGGTGCAA+GGG - chr8_4:48177293-48177312 Msa1329540:intron 80.0%
!! GGGGGGGGGGGGGGTGCAAG+GGG - chr8_4:48177294-48177313 Msa1329540:intron 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 48175343 48181336 48175343 ID=Msa1329540;Name=Msa1329540
chr8_4 mRNA 48175343 48181336 48175343 ID=Msa1329540-mRNA-1;Parent=Msa1329540;Name=Msa1329540-mRNA-1;_AED=0.15;_eAED=0.15;_QI=167|1|1|1|0.8|0.83|6|347|206
chr8_4 exon 48175343 48175830 48175343 ID=Msa1329540-mRNA-1:exon:13826;Parent=Msa1329540-mRNA-1
chr8_4 exon 48176180 48176270 48176180 ID=Msa1329540-mRNA-1:exon:13825;Parent=Msa1329540-mRNA-1
chr8_4 exon 48177481 48177592 48177481 ID=Msa1329540-mRNA-1:exon:13824;Parent=Msa1329540-mRNA-1
chr8_4 exon 48178307 48178395 48178307 ID=Msa1329540-mRNA-1:exon:13823;Parent=Msa1329540-mRNA-1
chr8_4 exon 48179459 48179529 48179459 ID=Msa1329540-mRNA-1:exon:13822;Parent=Msa1329540-mRNA-1
chr8_4 exon 48181053 48181336 48181053 ID=Msa1329540-mRNA-1:exon:13821;Parent=Msa1329540-mRNA-1
chr8_4 five_prime_UTR 48181170 48181336 48181170 ID=Msa1329540-mRNA-1:five_prime_utr;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48181053 48181169 48181053 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48179459 48179529 48179459 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48178307 48178395 48178307 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48177481 48177592 48177481 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48176180 48176270 48176180 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 CDS 48175690 48175830 48175690 ID=Msa1329540-mRNA-1:cds;Parent=Msa1329540-mRNA-1
chr8_4 three_prime_UTR 48175343 48175689 48175343 ID=Msa1329540-mRNA-1:three_prime_utr;Parent=Msa1329540-mRNA-1
Gene Sequence

>Msa1329540

ATGGCGCCAGTTTCAGCTCTCGCAAAGTACAAATTGGTTTTTCTCGGCGATCAATCCGTCGGTAAAACCAGCATCATCACTCGCTTCATGTACGACAAATTCGATAACACTTATCAGGCTACAATCGGTATTGATTTTCTATCAAAAACTATGTATCTTGAAGATCGAACTGTTCGGCTGCAGTTATGGGATACAGCTGGACAGGAGAGATTTAGAAGTCTTATTCCAAGCTACATTAGGGACTCATCTGTTGCTGTCATCGTTTATGATGTTGCAAGTCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTGAGAGGGGAAGTGATGTTATTGTTGTTCTTGTTGGGAACAAAACTGACCTTGTGGAAAAGAGGCAAGTCTCCACGGAGGAAGGGGAAGCAAAGTCTCGTGAGCTAAACGTTATGTTTATTGAAGCTAGTGCCAAAGCCGGCTTCAATATAAAGGCCCTGTTCCGAAAAATTGCTGCTGCTTTGCCTGGAATGGAAACACTATCAACCACAAAACAAGAAGACATGGTCGATGTGAACCTGAGGTCTTCTACCAGCCATGACTCTCAACCTCAGTCTGGCGGATGTTCTTGCTAA
Protein sequence

>Msa1329540

MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKTDLVEKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAALPGMETLSTTKQEDMVDVNLRSSTSHDSQPQSGGCSC*