AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1413180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413180 MtrunA17_Chr2g0283791 99.225 258 2 0 1 258 1 258 0.0 527
Msa1413180 MtrunA17_Chr2g0325591 81.102 254 47 1 6 258 8 261 4.40e-156 434
Msa1413180 MtrunA17_Chr8g0379011 85.124 242 33 2 1 239 1 242 2.25e-153 427
Msa1413180 MtrunA17_Chr2g0316011 78.689 244 50 2 6 248 9 251 1.10e-144 405
Msa1413180 MtrunA17_Chr5g0418971 76.596 235 54 1 9 242 11 245 1.64e-135 382
Msa1413180 MtrunA17_Chr5g0426551 69.412 255 71 3 3 254 6 256 1.88e-126 359
Msa1413180 MtrunA17_Chr3g0132301 69.841 252 72 3 3 251 6 256 2.30e-124 354
Msa1413180 MtrunA17_Chr4g0043141 70.763 236 49 2 24 239 1 236 1.72e-120 343
Msa1413180 MtrunA17_Chr3g0133161 64.979 237 79 2 6 238 12 248 2.00e-109 316
Msa1413180 MtrunA17_Chr1g0164601 53.219 233 102 4 6 234 12 241 5.55e-74 226
Msa1413180 MtrunA17_Chr3g0082111 52.361 233 104 4 6 234 42 271 2.21e-71 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1413180 AT2G42590.2 78.261 253 53 2 8 258 10 262 4.74e-146 409
Msa1413180 AT2G42590.3 77.559 254 54 2 8 258 10 263 1.29e-145 409
Msa1413180 AT2G42590.1 77.559 254 54 2 8 258 10 263 1.47e-145 408
Msa1413180 AT1G26480.1 73.256 258 62 2 6 256 11 268 1.28e-140 395
Msa1413180 AT1G34760.2 76.891 238 53 2 9 245 9 245 4.26e-133 376
Msa1413180 AT1G34760.1 76.891 238 53 2 9 245 9 245 5.46e-133 376
Msa1413180 AT1G22300.2 76.829 246 56 1 1 245 1 246 5.43e-132 373
Msa1413180 AT1G22300.1 76.829 246 56 1 1 245 1 246 6.20e-132 373
Msa1413180 AT1G22300.3 80.172 232 45 1 9 239 9 240 6.34e-131 370
Msa1413180 AT1G78300.1 68.504 254 77 2 1 251 1 254 2.46e-124 354
Msa1413180 AT1G35160.1 68.077 260 79 3 2 258 8 266 2.44e-123 352
Msa1413180 AT3G02520.1 67.939 262 80 3 1 258 1 262 1.12e-122 350
Msa1413180 AT3G02520.2 67.939 262 80 3 1 258 1 262 1.12e-122 350
Msa1413180 AT4G09000.1 68.254 252 72 3 1 244 1 252 3.26e-122 349
Msa1413180 AT5G38480.1 71.200 250 68 4 1 247 1 249 4.05e-122 348
Msa1413180 AT5G38480.3 71.371 248 67 4 1 245 1 247 1.72e-121 347
Msa1413180 AT5G38480.2 71.371 248 67 4 1 245 1 247 1.72e-121 347
Msa1413180 AT4G09000.2 70.370 243 64 3 1 235 1 243 1.91e-120 347
Msa1413180 AT1G35160.2 70.886 237 66 2 2 235 8 244 3.62e-120 345
Msa1413180 AT5G65430.1 67.373 236 73 2 7 238 9 244 4.81e-114 328
Msa1413180 AT5G10450.1 67.373 236 73 2 7 238 9 244 5.36e-114 327
Msa1413180 AT5G65430.2 67.811 233 71 2 7 235 9 241 2.98e-113 325
Msa1413180 AT5G10450.2 67.811 233 71 2 7 235 9 241 4.09e-113 325
Msa1413180 AT5G65430.3 67.811 233 71 2 7 235 9 241 9.83e-113 325
Msa1413180 AT5G10450.3 67.811 233 71 2 7 235 9 241 1.19e-112 324
Msa1413180 AT5G10450.4 67.811 233 71 2 7 235 9 241 1.87e-112 325
Msa1413180 AT5G16050.1 63.813 257 81 3 9 253 11 267 1.08e-111 322
Msa1413180 AT5G16050.2 63.813 257 81 3 9 253 11 267 1.08e-111 322
Msa1413180 AT1G78220.1 49.362 235 117 1 1 233 1 235 1.28e-76 233
Msa1413180 AT1G22290.1 48.598 214 85 6 1 208 1 195 1.35e-52 169
Msa1413180 AT1G22290.2 48.387 217 87 6 1 211 1 198 2.53e-52 169
Msa1413180 AT2G10450.1 60.465 43 17 0 202 244 17 59 7.69e-11 57.4

Find 94 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATAAGCGATTAAATAAA+AGG 0.167615 tig0024012:+66353 None:intergenic
AGACTCTGTTGGTCAATTTC+AGG 0.210851 tig0024012:+66465 None:intergenic
GATTGAATTGAATTTGAAAA+AGG 0.215402 tig0024012:+66238 None:intergenic
TTGAAAATGCGGAACGGTTT+TGG 0.239836 tig0024012:+66123 None:intergenic
CATCTTATTCCGAATTCTTC+TGG 0.256329 tig0024012:-65687 Msa1413180:CDS
GATGACTGTAATAATTTAAT+TGG 0.256916 tig0024012:-62521 Msa1413180:three_prime_UTR
TTTGCAATTTCTCTGCATTC+AGG 0.259034 tig0024012:-66427 Msa1413180:five_prime_UTR
TTGGAGCACGTAGGGCTTCT+TGG 0.262919 tig0024012:-65848 Msa1413180:CDS
GAGTATTTCTTTCCTATTCA+TGG 0.280824 tig0024012:-66395 Msa1413180:five_prime_UTR
TAATATTAGATATACCTTTC+AGG 0.295110 tig0024012:+64652 None:intergenic
TTCGGCTTGTTCAGCGAGTT+TGG 0.337013 tig0024012:+66050 None:intergenic
AGGCGATTATTATCGTTATC+TGG 0.341220 tig0024012:-65524 Msa1413180:CDS
TAACGCAACATTGGAATTGC+TGG 0.345151 tig0024012:+62581 None:intergenic
GAAACTCAATGTTGAATTAA+CGG 0.348481 tig0024012:-65913 Msa1413180:CDS
TCAATCTTTGAAAGCGTATC+AGG 0.360445 tig0024012:-65461 Msa1413180:intron
GTTGCTTACAAGAATGTTGT+TGG 0.372901 tig0024012:-65867 Msa1413180:CDS
TGGCGGTGTAGACGAAGTTT+TGG 0.385645 tig0024012:+66070 None:intergenic
AGTCACTTTAGTCCATGAAT+AGG 0.389302 tig0024012:+66383 None:intergenic
AAATAAGCGATTAAATAAAA+GGG 0.395068 tig0024012:+66354 None:intergenic
ACTAGTCTCTATGCAAGTTC+TGG 0.395577 tig0024012:-62731 Msa1413180:three_prime_UTR
GGCTTGTCACCTTGCCAAGC+AGG 0.427559 tig0024012:-64537 Msa1413180:CDS
TTGCAATTTCTCTGCATTCA+GGG 0.435934 tig0024012:-66426 Msa1413180:five_prime_UTR
TTAGATTCACCAGAAGAATT+CGG 0.439019 tig0024012:+65678 None:intergenic
GACCAACAGAGTCTACATTC+AGG 0.440512 tig0024012:-66456 Msa1413180:five_prime_UTR
ACATCCCATCAGACTGGGTT+TGG 0.444485 tig0024012:-64716 Msa1413180:CDS
GACTCTGTTGGTCAATTTCA+GGG 0.457499 tig0024012:+66466 None:intergenic
TGTCAGAAGTCCACAATGTC+AGG 0.458840 tig0024012:+64426 None:intergenic
CTAGGAAAATTATAAACCCT+GGG 0.458990 tig0024012:-62625 Msa1413180:three_prime_UTR
TGCTACATCAAATGCCTGCT+TGG 0.461423 tig0024012:+64523 None:intergenic
ATGAAGAAGAAGGGAGAATG+AGG 0.462657 tig0024012:+66157 None:intergenic
GATGTTACCTTCGTAGCGTT+CGG 0.465455 tig0024012:+66032 None:intergenic
CAAATCTCAACGATCTTCCA+TGG 0.468609 tig0024012:-66103 Msa1413180:exon
AATAAGCGATTAAATAAAAG+GGG 0.470246 tig0024012:+66355 None:intergenic
ATCTCCTGCAGGAGGAGCTC+GGG 0.473781 tig0024012:+62883 None:intergenic
CATTGTCAAATGAAAGCCCC+AGG 0.479493 tig0024012:+62608 None:intergenic
TTTGCATGCAGTAAAGTGAC+AGG 0.485969 tig0024012:-62787 Msa1413180:intron
CACTGATCATGCAGCTTCTG+AGG 0.487882 tig0024012:-64454 Msa1413180:CDS
ACCTCTGCATTATCTCCTGC+AGG 0.493629 tig0024012:+62872 None:intergenic
ATCAATATCGACTCAAACAA+AGG 0.497937 tig0024012:-66218 Msa1413180:five_prime_UTR
TTTAACAGTCGAGGAACAAA+AGG 0.499669 tig0024012:-62915 Msa1413180:intron
CTCAGCCTCTGCAGCAGTGG+AGG 0.505948 tig0024012:+64750 None:intergenic
TATCTCCTGCAGGAGGAGCT+CGG 0.507940 tig0024012:+62882 None:intergenic
TGATGTAGCAATCGCTGAGT+TGG 0.508758 tig0024012:-64510 Msa1413180:CDS
GAATGTTGTTGGAGCACGTA+GGG 0.515655 tig0024012:-65856 Msa1413180:CDS
TCTAGGAAAATTATAAACCC+TGG 0.515873 tig0024012:-62626 Msa1413180:three_prime_UTR
GGAAGCCTCCACTGCTGCAG+AGG 0.516556 tig0024012:-64755 Msa1413180:CDS
ACCAACAGAGTCTACATTCA+GGG 0.519786 tig0024012:-66455 Msa1413180:five_prime_UTR
TTGAATTAACGGTTGAAGAG+AGG 0.519994 tig0024012:-65902 Msa1413180:CDS
TCTGCCCGAGCTCCTCCTGC+AGG 0.522343 tig0024012:-62887 Msa1413180:CDS
CAAAGCCAAACCCAGTCTGA+TGG 0.529750 tig0024012:+64711 None:intergenic
AGCAGCGAGAAGAAGCGAAA+GGG 0.529966 tig0024012:-65806 Msa1413180:CDS
TCCCACACATCCCATCAGAC+TGG 0.532289 tig0024012:-64722 Msa1413180:CDS
AAAAGCATCTAACGCAACAT+TGG 0.535046 tig0024012:+62572 None:intergenic
AGTCTCTATGCAAGTTCTGG+TGG 0.543018 tig0024012:-62728 Msa1413180:three_prime_UTR
GAGCACGTAGGGCTTCTTGG+AGG 0.551251 tig0024012:-65845 Msa1413180:CDS
GGAGTGATGTGAATGTCAAT+CGG 0.556097 tig0024012:-65785 Msa1413180:CDS
TAACTCAGCCTCTGCAGCAG+TGG 0.556950 tig0024012:+64747 None:intergenic
CATCAAATGCCTGCTTGGCA+AGG 0.559534 tig0024012:+64528 None:intergenic
TGTGAATGTCAATCGGATCA+AGG 0.560657 tig0024012:-65778 Msa1413180:CDS
TGAAGAAGAAGGGAGAATGA+GGG 0.564163 tig0024012:+66158 None:intergenic
AAAGCCAAACCCAGTCTGAT+GGG 0.565776 tig0024012:+64712 None:intergenic
TGAACAGTAAGTCTGTCTCT+AGG 0.566393 tig0024012:-62643 Msa1413180:three_prime_UTR
CCCACACATCCCATCAGACT+GGG 0.567720 tig0024012:-64721 Msa1413180:CDS
GTTTGGGTGATGAAGAAGAA+GGG 0.573430 tig0024012:+66148 None:intergenic
TCAATCGGATCAAGGAGTAT+CGG 0.575135 tig0024012:-65770 Msa1413180:CDS
AAATCTTGAACTCTCCTGAA+AGG 0.575438 tig0024012:-64666 Msa1413180:intron
GGCTTGTTCAGCGAGTTTGG+CGG 0.577446 tig0024012:+66053 None:intergenic
ATCGTTGAGATTTGAAAATG+CGG 0.579565 tig0024012:+66112 None:intergenic
GAGCGGTGATGAGAGGAAAG+AGG 0.579801 tig0024012:-65491 Msa1413180:CDS
AGTTTAAGAGCGGTGATGAG+AGG 0.596754 tig0024012:-65498 Msa1413180:CDS
ACTGATCATGCAGCTTCTGA+GGG 0.597947 tig0024012:-64453 Msa1413180:CDS
AATGATGAAATCATCTAAGG+TGG 0.601059 tig0024012:+62462 None:intergenic
CCCAGTCTGATGGGATGTGT+GGG 0.603776 tig0024012:+64721 None:intergenic
ATTCCTACAACTAGAAAACA+TGG 0.606234 tig0024012:+62695 None:intergenic
ACCCAGTCTGATGGGATGTG+TGG 0.607248 tig0024012:+64720 None:intergenic
ACTTCTGACATTCCTGAGGA+AGG 0.613131 tig0024012:-64413 Msa1413180:CDS
TCCCTGAATGTAGACTCTGT+TGG 0.618734 tig0024012:+66454 None:intergenic
GAGCAGCGAGAAGAAGCGAA+AGG 0.628936 tig0024012:-65807 Msa1413180:CDS
GGTTTGGGTGATGAAGAAGA+AGG 0.633297 tig0024012:+66147 None:intergenic
TGAGGGACAACCTGACATTG+TGG 0.634685 tig0024012:-64436 Msa1413180:CDS
GTGGACTTCTGACATTCCTG+AGG 0.637259 tig0024012:-64417 Msa1413180:CDS
TCTGACATTCCTGAGGAAGG+AGG 0.638467 tig0024012:-64410 Msa1413180:intron
ATTGTCAAATGAAAGCCCCA+GGG 0.641003 tig0024012:+62609 None:intergenic
GAACAAGCCGAACGCTACGA+AGG 0.646756 tig0024012:-66039 Msa1413180:intron
TGAGATTTGAAAATGCGGAA+CGG 0.660786 tig0024012:+66117 None:intergenic
ATAAGCGATTAAATAAAAGG+GGG 0.662193 tig0024012:+66356 None:intergenic
TGAGTTGGATTCTCTCAATG+AGG 0.669995 tig0024012:-64495 Msa1413180:CDS
TATCTGGCTGAGTTTAAGAG+CGG 0.685496 tig0024012:-65508 Msa1413180:CDS
AGTCTGATGGGATGTGTGGG+AGG 0.685644 tig0024012:+64724 None:intergenic
TCTGCATTATCTCCTGCAGG+AGG 0.689694 tig0024012:+62875 None:intergenic
TCCTGCAGGAGATAATGCAG+AGG 0.691697 tig0024012:-62873 Msa1413180:intron
GTTCAATTAAAACATCCTAG+TGG 0.694491 tig0024012:+62661 None:intergenic
TAGGAAAATTATAAACCCTG+GGG 0.717526 tig0024012:-62624 Msa1413180:three_prime_UTR
AGAATGTTGTTGGAGCACGT+AGG 0.773880 tig0024012:-65857 Msa1413180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGCGATTAAATAAAA+GGG + tig0024012:62597-62616 None:intergenic 15.0%
!! TAAATAAGCGATTAAATAAA+AGG + tig0024012:62598-62617 None:intergenic 15.0%
!!! TATCGAAATTGAATTTTATA+AGG + tig0024012:62646-62665 None:intergenic 15.0%
!!! TTATAAAAGGTGTTTTTATT+GGG - tig0024012:63783-63802 Msa1413180:intron 15.0%
!!! TTTTATAGTAAACAATCATT+AGG + tig0024012:63883-63902 None:intergenic 15.0%
!!! ATATAATGACTCAATTTTAA+TGG + tig0024012:65189-65208 None:intergenic 15.0%
!! TAAAATTGAGTCATTATATA+TGG - tig0024012:65190-65209 Msa1413180:intron 15.0%
!! AAAATTGAGTCATTATATAT+GGG - tig0024012:65191-65210 Msa1413180:intron 15.0%
!!! ATATATGGGAAATAAAATTT+TGG - tig0024012:65205-65224 Msa1413180:intron 15.0%
!!! TATATGGGAAATAAAATTTT+GGG - tig0024012:65206-65225 Msa1413180:intron 15.0%
!!! AATATATTTTGGACATATAT+TGG + tig0024012:65702-65721 None:intergenic 15.0%
!! GTCCAAAATATATTAAATAT+CGG - tig0024012:65708-65727 Msa1413180:CDS 15.0%
!! AATAAGCGATTAAATAAAAG+GGG + tig0024012:62596-62615 None:intergenic 20.0%
!! GATTGAATTGAATTTGAAAA+AGG + tig0024012:62713-62732 None:intergenic 20.0%
!!! CAAAATGTAGGTTTATTTTT+TGG - tig0024012:63305-63324 Msa1413180:intron 20.0%
!! TATTGCCTAAAACTTATAAA+AGG - tig0024012:63770-63789 Msa1413180:intron 20.0%
!!! AAACACCTTTTATAAGTTTT+AGG + tig0024012:63778-63797 None:intergenic 20.0%
!!! CTTATAAAAGGTGTTTTTAT+TGG - tig0024012:63782-63801 Msa1413180:intron 20.0%
!! TAATATTAGATATACCTTTC+AGG + tig0024012:64299-64318 None:intergenic 20.0%
!!! AATAAAAAACAAAGCATTTC+AGG + tig0024012:64620-64639 None:intergenic 20.0%
!! TGAAGTTATGTAAATTCATA+AGG + tig0024012:64880-64899 None:intergenic 20.0%
!! GTTAAAATTGAGTCATTATA+GGG - tig0024012:65451-65470 Msa1413180:intron 20.0%
!! TTAAAATTGAGTCATTATAG+GGG - tig0024012:65452-65471 Msa1413180:intron 20.0%
!! AAATAATATGCATACGAATT+AGG + tig0024012:65944-65963 None:intergenic 20.0%
!! TGCAAAATATAACTTTGTTA+AGG + tig0024012:66147-66166 None:intergenic 20.0%
!! GATGACTGTAATAATTTAAT+TGG - tig0024012:66427-66446 Msa1413180:five_prime_UTR 20.0%
! ATAAGCGATTAAATAAAAGG+GGG + tig0024012:62595-62614 None:intergenic 25.0%
!!! TGCTTTGTTTCTTTTAGAAA+TGG - tig0024012:62990-63009 Msa1413180:intron 25.0%
! GAAACTCAATGTTGAATTAA+CGG - tig0024012:63035-63054 Msa1413180:intron 25.0%
! TGTGTTCTATTACAAAATGT+AGG - tig0024012:63293-63312 Msa1413180:intron 25.0%
!! ATTCCATCTAATCTTGTTAT+AGG - tig0024012:63734-63753 Msa1413180:intron 25.0%
! AAACCTATAACAAGATTAGA+TGG + tig0024012:63740-63759 None:intergenic 25.0%
! AACTGTTATATACACTTCAT+AGG - tig0024012:63851-63870 Msa1413180:intron 25.0%
! ACTGTTATATACACTTCATA+GGG - tig0024012:63852-63871 Msa1413180:intron 25.0%
! AAAAAAATTCTTGAGTGAAC+TGG + tig0024012:64119-64138 None:intergenic 25.0%
! TCATACATGAAAATAATTGC+AGG - tig0024012:64172-64191 Msa1413180:intron 25.0%
!! TAGAGATTCCAACTAATTTT+TGG - tig0024012:64769-64788 Msa1413180:intron 25.0%
! TGAATTATGTTCATGTTTCA+TGG + tig0024012:64834-64853 None:intergenic 25.0%
!!! ATTTTTCAACAAAAACTGTC+AGG + tig0024012:64922-64941 None:intergenic 25.0%
!!! TAAAATTTTGGGTTTTTGCA+CGG - tig0024012:65217-65236 Msa1413180:intron 25.0%
!!! TCAATTTTAACGATACTTCT+GGG + tig0024012:65442-65461 None:intergenic 25.0%
! CGTTAAAATTGAGTCATTAT+AGG - tig0024012:65450-65469 Msa1413180:intron 25.0%
!! GGCCGATATTTAATATATTT+TGG + tig0024012:65713-65732 None:intergenic 25.0%
!!! AGAATCATAAACTTTTGAGT+TGG + tig0024012:65741-65760 None:intergenic 25.0%
! ATTCAGGAAAATTGATTGAA+GGG + tig0024012:66003-66022 None:intergenic 25.0%
! AATTCAGGAAAATTGATTGA+AGG + tig0024012:66004-66023 None:intergenic 25.0%
!! TCCATGAATCTTATGTTTTT+CGG + tig0024012:66409-66428 None:intergenic 25.0%
GAGTATTTCTTTCCTATTCA+TGG - tig0024012:62553-62572 Msa1413180:three_prime_UTR 30.0%
!! ATCAATATCGACTCAAACAA+AGG - tig0024012:62730-62749 Msa1413180:three_prime_UTR 30.0%
ATCGTTGAGATTTGAAAATG+CGG + tig0024012:62839-62858 None:intergenic 30.0%
GAAAAAAGTTGAATCAGAGT+TGG - tig0024012:63200-63219 Msa1413180:intron 30.0%
TTAGATTCACCAGAAGAATT+CGG + tig0024012:63273-63292 None:intergenic 30.0%
! TTTTGCATTCGAATTCATTG+TGG - tig0024012:63826-63845 Msa1413180:intron 30.0%
CTGTTATATACACTTCATAG+GGG - tig0024012:63853-63872 Msa1413180:intron 30.0%
TTCATCTTCAAATCAATCAC+AGG + tig0024012:63911-63930 None:intergenic 30.0%
!! ATTGATTTGAAGATGAAGTG+AGG - tig0024012:63914-63933 Msa1413180:intron 30.0%
!!! TGATCTATGATTGGTTTTCA+TGG - tig0024012:64007-64026 Msa1413180:intron 30.0%
!!! GATGGTTTTTCAAGTAAAAG+AGG + tig0024012:64038-64057 None:intergenic 30.0%
AAAAACCATCATCTTGTCTA+GGG - tig0024012:64048-64067 Msa1413180:intron 30.0%
!!! ACTCAAGAATTTTTTTGCAC+TGG - tig0024012:64123-64142 Msa1413180:intron 30.0%
ATGAACACATAAAAACTGAG+GGG + tig0024012:64348-64367 None:intergenic 30.0%
CATGAACACATAAAAACTGA+GGG + tig0024012:64349-64368 None:intergenic 30.0%
! AGTTTTTATGTGTTCATGGT+AGG - tig0024012:64351-64370 Msa1413180:intron 30.0%
! ACTGTTTTCTTTCGTATTTC+AGG - tig0024012:64389-64408 Msa1413180:intron 30.0%
! CTGTTTTCTTTCGTATTTCA+GGG - tig0024012:64390-64409 Msa1413180:intron 30.0%
TATGCTAATTTGATATGCAG+AGG - tig0024012:64582-64601 Msa1413180:intron 30.0%
ACTAACAACTAACAATCACA+TGG + tig0024012:64721-64740 None:intergenic 30.0%
CTTCTGATCCAAAAATTAGT+TGG + tig0024012:64780-64799 None:intergenic 30.0%
! AAAACAAGATCTAGTTCCAT+TGG + tig0024012:64808-64827 None:intergenic 30.0%
!! CTCAATTTTAACGATACTTC+TGG + tig0024012:65443-65462 None:intergenic 30.0%
! AGTCATTATAGGGGAAATTT+TGG - tig0024012:65461-65480 Msa1413180:intron 30.0%
! GTCATTATAGGGGAAATTTT+GGG - tig0024012:65462-65481 Msa1413180:CDS 30.0%
AATAAACCTACTTTCCCTAT+TGG - tig0024012:65497-65516 Msa1413180:CDS 30.0%
TATGAATCACAGTTCCAATA+GGG + tig0024012:65514-65533 None:intergenic 30.0%
TTATGAATCACAGTTCCAAT+AGG + tig0024012:65515-65534 None:intergenic 30.0%
AAGTAACAATGGCAAAATTG+AGG + tig0024012:65896-65915 None:intergenic 30.0%
GTTTGAAAGGAAAGTAACAA+TGG + tig0024012:65907-65926 None:intergenic 30.0%
GTTAAAAAGGAAGGAAATTC+AGG + tig0024012:66019-66038 None:intergenic 30.0%
! TAAAGTGACAGGTTTTACTA+GGG - tig0024012:66172-66191 Msa1413180:five_prime_UTR 30.0%
!!! TTTCCATGTTTTCTAGTTGT+AGG - tig0024012:66250-66269 Msa1413180:five_prime_UTR 30.0%
ATTCCTACAACTAGAAAACA+TGG + tig0024012:66256-66275 None:intergenic 30.0%
GTTCAATTAAAACATCCTAG+TGG + tig0024012:66290-66309 None:intergenic 30.0%
TCTAGGAAAATTATAAACCC+TGG - tig0024012:66322-66341 Msa1413180:five_prime_UTR 30.0%
CTAGGAAAATTATAAACCCT+GGG - tig0024012:66323-66342 Msa1413180:five_prime_UTR 30.0%
TAGGAAAATTATAAACCCTG+GGG - tig0024012:66324-66343 Msa1413180:five_prime_UTR 30.0%
! CCATGAATCTTATGTTTTTC+GGG + tig0024012:66408-66427 None:intergenic 30.0%
TTTGCAATTTCTCTGCATTC+AGG - tig0024012:62521-62540 Msa1413180:three_prime_UTR 35.0%
TTGCAATTTCTCTGCATTCA+GGG - tig0024012:62522-62541 Msa1413180:three_prime_UTR 35.0%
! AGTCACTTTAGTCCATGAAT+AGG + tig0024012:62568-62587 None:intergenic 35.0%
TGAGATTTGAAAATGCGGAA+CGG + tig0024012:62834-62853 None:intergenic 35.0%
!!! TGTAGACGAAGTTTTGGTTA+GGG + tig0024012:62875-62894 None:intergenic 35.0%
TTGAATTAACGGTTGAAGAG+AGG - tig0024012:63046-63065 Msa1413180:intron 35.0%
GTTGCTTACAAGAATGTTGT+TGG - tig0024012:63081-63100 Msa1413180:intron 35.0%
CATCTTATTCCGAATTCTTC+TGG - tig0024012:63261-63280 Msa1413180:intron 35.0%
TTCGTGTTTGATTGTGTTGT+AGG - tig0024012:63399-63418 Msa1413180:intron 35.0%
GTTTGATTGTGTTGTAGGAA+AGG - tig0024012:63404-63423 Msa1413180:intron 35.0%
AGGCGATTATTATCGTTATC+TGG - tig0024012:63424-63443 Msa1413180:intron 35.0%
! TCAATCTTTGAAAGCGTATC+AGG - tig0024012:63487-63506 Msa1413180:intron 35.0%
CAGGTATTCTACACAATTGT+CGG - tig0024012:63506-63525 Msa1413180:intron 35.0%
AGGTATTCTACACAATTGTC+GGG - tig0024012:63507-63526 Msa1413180:intron 35.0%
CTTGAAAGCTTAATCATGCT+TGG - tig0024012:63580-63599 Msa1413180:intron 35.0%
! TGAAGTGAGGTGTTATATGT+TGG - tig0024012:63927-63946 Msa1413180:intron 35.0%
ACCAATCATAGATCAGTCTT+GGG + tig0024012:64002-64021 None:intergenic 35.0%
AACCAATCATAGATCAGTCT+TGG + tig0024012:64003-64022 None:intergenic 35.0%
GAAAAACCATCATCTTGTCT+AGG - tig0024012:64047-64066 Msa1413180:intron 35.0%
AAAACCATCATCTTGTCTAG+GGG - tig0024012:64049-64068 Msa1413180:intron 35.0%
AAATCTTGAACTCTCCTGAA+AGG - tig0024012:64282-64301 Msa1413180:intron 35.0%
TGAACACATAAAAACTGAGG+GGG + tig0024012:64347-64366 None:intergenic 35.0%
CCATGAACACATAAAAACTG+AGG + tig0024012:64350-64369 None:intergenic 35.0%
! CCTCAGTTTTTATGTGTTCA+TGG - tig0024012:64347-64366 Msa1413180:intron 35.0%
! GATATTTTCCTTAGTCAGAC+AGG - tig0024012:64650-64669 Msa1413180:intron 35.0%
AGTTGGAATCTCTATCAAGT+GGG + tig0024012:64763-64782 None:intergenic 35.0%
TAGTTGGAATCTCTATCAAG+TGG + tig0024012:64764-64783 None:intergenic 35.0%
!!! GAGTTTTTAGAACTACTTGC+AGG + tig0024012:64957-64976 None:intergenic 35.0%
TGTGTCTATGTTTCCAATTG+CGG - tig0024012:64990-65009 Msa1413180:intron 35.0%
!! TCAATTTTAATGGTGCTCCT+GGG + tig0024012:65179-65198 None:intergenic 35.0%
GATTCCAATTCAAGACAAGA+AGG + tig0024012:65365-65384 None:intergenic 35.0%
TCTTGTCTTGAATTGGAATC+TGG - tig0024012:65365-65384 Msa1413180:intron 35.0%
TTAGAATGAGGGAAAGTTGA+GGG + tig0024012:65596-65615 None:intergenic 35.0%
ATTAGAATGAGGGAAAGTTG+AGG + tig0024012:65597-65616 None:intergenic 35.0%
TGTCACAGCTATTAGAATGA+GGG + tig0024012:65607-65626 None:intergenic 35.0%
TTGTCACAGCTATTAGAATG+AGG + tig0024012:65608-65627 None:intergenic 35.0%
!!! TAAACTTTTGAGTTGGTGCT+TGG + tig0024012:65734-65753 None:intergenic 35.0%
TCATCATTAACTTCCAGCAT+TGG - tig0024012:65775-65794 Msa1413180:CDS 35.0%
CATCATTAACTTCCAGCATT+GGG - tig0024012:65776-65795 Msa1413180:CDS 35.0%
TGTCTTTAGTGTTTCCTTTC+TGG - tig0024012:65818-65837 Msa1413180:CDS 35.0%
! CGAGTTTAAAACAACCAGAA+AGG + tig0024012:65835-65854 None:intergenic 35.0%
GAAAATTGATTGAAGGGCAA+AGG + tig0024012:65997-66016 None:intergenic 35.0%
TTGTTCCTCGACTGTTAAAA+AGG + tig0024012:66032-66051 None:intergenic 35.0%
TTTAACAGTCGAGGAACAAA+AGG - tig0024012:66033-66052 Msa1413180:intron 35.0%
! GTAAAGTGACAGGTTTTACT+AGG - tig0024012:66171-66190 Msa1413180:five_prime_UTR 35.0%
! AAAGTGACAGGTTTTACTAG+GGG - tig0024012:66173-66192 Msa1413180:five_prime_UTR 35.0%
!!! GAATTTTAAAGCTCACCACT+AGG - tig0024012:66272-66291 Msa1413180:five_prime_UTR 35.0%
!! AAAAGCATCTAACGCAACAT+TGG + tig0024012:66379-66398 None:intergenic 35.0%
CCCGAAAAACATAAGATTCA+TGG - tig0024012:66405-66424 Msa1413180:five_prime_UTR 35.0%
GACTCTGTTGGTCAATTTCA+GGG + tig0024012:62485-62504 None:intergenic 40.0%
AGACTCTGTTGGTCAATTTC+AGG + tig0024012:62486-62505 None:intergenic 40.0%
ACCAACAGAGTCTACATTCA+GGG - tig0024012:62493-62512 Msa1413180:three_prime_UTR 40.0%
TGAAGAAGAAGGGAGAATGA+GGG + tig0024012:62793-62812 None:intergenic 40.0%
ATGAAGAAGAAGGGAGAATG+AGG + tig0024012:62794-62813 None:intergenic 40.0%
GTTTGGGTGATGAAGAAGAA+GGG + tig0024012:62803-62822 None:intergenic 40.0%
! TTGAAAATGCGGAACGGTTT+TGG + tig0024012:62828-62847 None:intergenic 40.0%
CAAATCTCAACGATCTTCCA+TGG - tig0024012:62845-62864 Msa1413180:intron 40.0%
!!! GTAGACGAAGTTTTGGTTAG+GGG + tig0024012:62874-62893 None:intergenic 40.0%
!!! GTGTAGACGAAGTTTTGGTT+AGG + tig0024012:62876-62895 None:intergenic 40.0%
GGAGTGATGTGAATGTCAAT+CGG - tig0024012:63163-63182 Msa1413180:intron 40.0%
TGTGAATGTCAATCGGATCA+AGG - tig0024012:63170-63189 Msa1413180:intron 40.0%
! TCAATCGGATCAAGGAGTAT+CGG - tig0024012:63178-63197 Msa1413180:intron 40.0%
! TTTTTGCTCGCGCTGAAATT+TGG - tig0024012:63354-63373 Msa1413180:intron 40.0%
TATCTGGCTGAGTTTAAGAG+CGG - tig0024012:63440-63459 Msa1413180:intron 40.0%
GGTATTCTACACAATTGTCG+GGG - tig0024012:63508-63527 Msa1413180:intron 40.0%
! TATGTTGGTGCTTAGTCTTC+AGG - tig0024012:63942-63961 Msa1413180:intron 40.0%
TCCCAAGACTGATCTATGAT+TGG - tig0024012:63998-64017 Msa1413180:intron 40.0%
GAACACATAAAAACTGAGGG+GGG + tig0024012:64346-64365 None:intergenic 40.0%
TTTATGTGTTCATGGTAGGC+TGG - tig0024012:64355-64374 Msa1413180:intron 40.0%
! TGAGTTGGATTCTCTCAATG+AGG - tig0024012:64453-64472 Msa1413180:CDS 40.0%
! ATTTTCCTTAGTCAGACAGG+AGG - tig0024012:64653-64672 Msa1413180:intron 40.0%
TGGATCAGAAGAAGATCCAA+TGG - tig0024012:64789-64808 Msa1413180:intron 40.0%
TTCACAATCCTGTAGAAAGC+AGG - tig0024012:64896-64915 Msa1413180:intron 40.0%
TGTTGTGGTCTAAAAAACCC+AGG - tig0024012:65159-65178 Msa1413180:intron 40.0%
!! CTCAATTTTAATGGTGCTCC+TGG + tig0024012:65180-65199 None:intergenic 40.0%
TCCAATTCAAGACAAGAAGG+CGG + tig0024012:65362-65381 None:intergenic 40.0%
GGTTATCTCAGCCAAAACAT+TGG + tig0024012:65421-65440 None:intergenic 40.0%
ACAGTTCCAATAGGGAAAGT+AGG + tig0024012:65506-65525 None:intergenic 40.0%
!! CTGATTGATGATGGTTGAGA+AGG + tig0024012:65639-65658 None:intergenic 40.0%
TCTCAACCATCATCAATCAG+TGG - tig0024012:65639-65658 Msa1413180:intron 40.0%
! TCATCTCTCAATCCCAGTTT+TGG - tig0024012:65663-65682 Msa1413180:CDS 40.0%
! CATCTCTCAATCCCAGTTTT+GGG - tig0024012:65664-65683 Msa1413180:CDS 40.0%
! ATCTCTCAATCCCAGTTTTG+GGG - tig0024012:65665-65684 Msa1413180:CDS 40.0%
! ATACGAATTAGGAAGTGCGA+AGG + tig0024012:65933-65952 None:intergenic 40.0%
AATTGATTGAAGGGCAAAGG+CGG + tig0024012:65994-66013 None:intergenic 40.0%
! TCCTTCCTTTTTAACAGTCG+AGG - tig0024012:66024-66043 Msa1413180:intron 40.0%
TCCTCGACTGTTAAAAAGGA+AGG + tig0024012:66028-66047 None:intergenic 40.0%
TTACCTGAGAGATTGTCTTC+TGG - tig0024012:66110-66129 Msa1413180:five_prime_UTR 40.0%
AAACCAGAAGACAATCTCTC+AGG + tig0024012:66116-66135 None:intergenic 40.0%
TTTGCATGCAGTAAAGTGAC+AGG - tig0024012:66161-66180 Msa1413180:five_prime_UTR 40.0%
! ACTAGTCTCTATGCAAGTTC+TGG - tig0024012:66217-66236 Msa1413180:five_prime_UTR 40.0%
TGAACAGTAAGTCTGTCTCT+AGG - tig0024012:66305-66324 Msa1413180:five_prime_UTR 40.0%
ATTGTCAAATGAAAGCCCCA+GGG + tig0024012:66342-66361 None:intergenic 40.0%
TAACGCAACATTGGAATTGC+TGG + tig0024012:66370-66389 None:intergenic 40.0%
GACCAACAGAGTCTACATTC+AGG - tig0024012:62492-62511 Msa1413180:three_prime_UTR 45.0%
TCCCTGAATGTAGACTCTGT+TGG + tig0024012:62497-62516 None:intergenic 45.0%
GGTTTGGGTGATGAAGAAGA+AGG + tig0024012:62804-62823 None:intergenic 45.0%
!! AAAATGCGGAACGGTTTTGG+TGG + tig0024012:62825-62844 None:intergenic 45.0%
GATGTTACCTTCGTAGCGTT+CGG + tig0024012:62919-62938 None:intergenic 45.0%
AGAATGTTGTTGGAGCACGT+AGG - tig0024012:63091-63110 Msa1413180:intron 45.0%
GAATGTTGTTGGAGCACGTA+GGG - tig0024012:63092-63111 Msa1413180:intron 45.0%
AGTTTAAGAGCGGTGATGAG+AGG - tig0024012:63450-63469 Msa1413180:intron 45.0%
TCTTCAATAAAGCAGTCCGC+AGG - tig0024012:63666-63685 Msa1413180:intron 45.0%
ACTTCCCCTAGACAAGATGA+TGG + tig0024012:64056-64075 None:intergenic 45.0%
AAAGCCAAACCCAGTCTGAT+GGG + tig0024012:64239-64258 None:intergenic 45.0%
TGCTACATCAAATGCCTGCT+TGG + tig0024012:64428-64447 None:intergenic 45.0%
TGATGTAGCAATCGCTGAGT+TGG - tig0024012:64438-64457 Msa1413180:CDS 45.0%
ACTGATCATGCAGCTTCTGA+GGG - tig0024012:64495-64514 Msa1413180:CDS 45.0%
TGTCAGAAGTCCACAATGTC+AGG + tig0024012:64525-64544 None:intergenic 45.0%
ACTTCTGACATTCCTGAGGA+AGG - tig0024012:64535-64554 Msa1413180:CDS 45.0%
! TAGTTTTCACCTCCTTCCTC+AGG + tig0024012:64550-64569 None:intergenic 45.0%
GGAATCTCTATCAAGTGGGT+GGG + tig0024012:64759-64778 None:intergenic 45.0%
TGGAATCTCTATCAAGTGGG+TGG + tig0024012:64760-64779 None:intergenic 45.0%
!!! TGGCATCTGGTTTTGCATCT+TGG - tig0024012:65113-65132 Msa1413180:intron 45.0%
!!! GGCATCTGGTTTTGCATCTT+GGG - tig0024012:65114-65133 Msa1413180:intron 45.0%
AGAAGTTGCACAGACAAGAG+GGG + tig0024012:65257-65276 None:intergenic 45.0%
GAGAAGTTGCACAGACAAGA+GGG + tig0024012:65258-65277 None:intergenic 45.0%
AGAGAAGTTGCACAGACAAG+AGG + tig0024012:65259-65278 None:intergenic 45.0%
TTGTCAATAGTGCCGCATTG+CGG - tig0024012:65278-65297 Msa1413180:intron 45.0%
!!! TGGAATCTGGTTTTGCGTCT+TGG - tig0024012:65378-65397 Msa1413180:intron 45.0%
!!! GGAATCTGGTTTTGCGTCTT+GGG - tig0024012:65379-65398 Msa1413180:intron 45.0%
! GGAAAAGATGGTGGCAGTTT+GGG + tig0024012:65549-65568 None:intergenic 45.0%
! TGGAAAAGATGGTGGCAGTT+TGG + tig0024012:65550-65569 None:intergenic 45.0%
GTACAATAAACCACTGCTGC+TGG + tig0024012:65570-65589 None:intergenic 45.0%
AATGAGGGAAAGTTGAGGGT+TGG + tig0024012:65592-65611 None:intergenic 45.0%
! GATGAGCCACTGATTGATGA+TGG + tig0024012:65648-65667 None:intergenic 45.0%
CGATGTTAGACCCCAAAACT+GGG + tig0024012:65678-65697 None:intergenic 45.0%
!!! CCAGTTTTGGGGTCTAACAT+CGG - tig0024012:65676-65695 Msa1413180:CDS 45.0%
ATACCACTAAGACCCAATGC+TGG + tig0024012:65791-65810 None:intergenic 45.0%
AGTGCGAAGGCAAGTTTGAA+AGG + tig0024012:65920-65939 None:intergenic 45.0%
! CAGGTTTTACTAGGGGTTTG+TGG - tig0024012:66180-66199 Msa1413180:five_prime_UTR 45.0%
! AGTCTCTATGCAAGTTCTGG+TGG - tig0024012:66220-66239 Msa1413180:five_prime_UTR 45.0%
CATTGTCAAATGAAAGCCCC+AGG + tig0024012:66343-66362 None:intergenic 45.0%
!! CGGAACGGTTTTGGTGGTTT+GGG + tig0024012:62819-62838 None:intergenic 50.0%
!!! GTTTTGGTTAGGGGAAGCCA+TGG + tig0024012:62865-62884 None:intergenic 50.0%
! TGGCGGTGTAGACGAAGTTT+TGG + tig0024012:62881-62900 None:intergenic 50.0%
! TTCGGCTTGTTCAGCGAGTT+TGG + tig0024012:62901-62920 None:intergenic 50.0%
AGCAGCGAGAAGAAGCGAAA+GGG - tig0024012:63142-63161 Msa1413180:intron 50.0%
ATAAAGCAGTCCGCAGGACT+TGG - tig0024012:63672-63691 Msa1413180:intron 50.0%
! TGGTGCTTAGTCTTCAGGCA+TGG - tig0024012:63947-63966 Msa1413180:intron 50.0%
ACATCCCATCAGACTGGGTT+TGG - tig0024012:64232-64251 Msa1413180:intron 50.0%
CAAAGCCAAACCCAGTCTGA+TGG + tig0024012:64240-64259 None:intergenic 50.0%
CATCAAATGCCTGCTTGGCA+AGG + tig0024012:64423-64442 None:intergenic 50.0%
CACTGATCATGCAGCTTCTG+AGG - tig0024012:64494-64513 Msa1413180:CDS 50.0%
TGAGGGACAACCTGACATTG+TGG - tig0024012:64512-64531 Msa1413180:CDS 50.0%
GTGGACTTCTGACATTCCTG+AGG - tig0024012:64531-64550 Msa1413180:CDS 50.0%
TCTGACATTCCTGAGGAAGG+AGG - tig0024012:64538-64557 Msa1413180:CDS 50.0%
CACATCCTCCTGTCTGACTA+AGG + tig0024012:64661-64680 None:intergenic 50.0%
TCTCTATCAAGTGGGTGGGA+GGG + tig0024012:64755-64774 None:intergenic 50.0%
ATCTCTATCAAGTGGGTGGG+AGG + tig0024012:64756-64775 None:intergenic 50.0%
ATTACCGTGGCGTGAAACAG+TGG - tig0024012:65016-65035 Msa1413180:intron 50.0%
ATGTGTCGTGTGGTCCAGAA+TGG - tig0024012:65054-65073 Msa1413180:intron 50.0%
CAACAGACGCAACTCCATTC+TGG + tig0024012:65071-65090 None:intergenic 50.0%
GATGCCAAGACAAGACACGA+AGG + tig0024012:65100-65119 None:intergenic 50.0%
TCGTGTCTTGTCTTGGCATC+TGG - tig0024012:65100-65119 Msa1413180:intron 50.0%
!! ATAGGAGCGTCACAGTGTTG+TGG - tig0024012:65144-65163 Msa1413180:intron 50.0%
GCACAGACAAGAGGGGAAAT+AGG + tig0024012:65250-65269 None:intergenic 50.0%
TGTCAATAGTGCCGCATTGC+GGG - tig0024012:65279-65298 Msa1413180:intron 50.0%
GCCGCCTTCTTGTCTTGAAT+TGG - tig0024012:65358-65377 Msa1413180:intron 50.0%
!!! GGATAGGAGCGCCAATGTTT+TGG - tig0024012:65407-65426 Msa1413180:intron 50.0%
! AAGATGGTGGCAGTTTGGGA+CGG + tig0024012:65545-65564 None:intergenic 50.0%
ACTGCTGCTGGAAAAGATGG+TGG + tig0024012:65558-65577 None:intergenic 50.0%
! ACCATCTTTTCCAGCAGCAG+TGG - tig0024012:65557-65576 Msa1413180:intron 50.0%
ACCACTGCTGCTGGAAAAGA+TGG + tig0024012:65561-65580 None:intergenic 50.0%
! GATGATGGTTGAGAAGGAGC+AGG + tig0024012:65633-65652 None:intergenic 50.0%
CCGATGTTAGACCCCAAAAC+TGG + tig0024012:65679-65698 None:intergenic 50.0%
! CTTCCAGCATTGGGTCTTAG+TGG - tig0024012:65785-65804 Msa1413180:CDS 50.0%
TCTGCATTATCTCCTGCAGG+AGG + tig0024012:66076-66095 None:intergenic 50.0%
TCCTGCAGGAGATAATGCAG+AGG - tig0024012:66075-66094 Msa1413180:CDS 50.0%
ACCTCTGCATTATCTCCTGC+AGG + tig0024012:66079-66098 None:intergenic 50.0%
!! GCGGAACGGTTTTGGTGGTT+TGG + tig0024012:62820-62839 None:intergenic 55.0%
! GGCTTGTTCAGCGAGTTTGG+CGG + tig0024012:62898-62917 None:intergenic 55.0%
GAACAAGCCGAACGCTACGA+AGG - tig0024012:62909-62928 Msa1413180:CDS 55.0%
TTGGAGCACGTAGGGCTTCT+TGG - tig0024012:63100-63119 Msa1413180:intron 55.0%
GAGCAGCGAGAAGAAGCGAA+AGG - tig0024012:63141-63160 Msa1413180:intron 55.0%
GAGCGGTGATGAGAGGAAAG+AGG - tig0024012:63457-63476 Msa1413180:intron 55.0%
!! GTCCGCAGGACTTGGCTTTT+CGG - tig0024012:63680-63699 Msa1413180:intron 55.0%
!! TCCGCAGGACTTGGCTTTTC+GGG - tig0024012:63681-63700 Msa1413180:intron 55.0%
TCCCGAAAAGCCAAGTCCTG+CGG + tig0024012:63685-63704 None:intergenic 55.0%
TAACTCAGCCTCTGCAGCAG+TGG + tig0024012:64204-64223 None:intergenic 55.0%
AGTCTGATGGGATGTGTGGG+AGG + tig0024012:64227-64246 None:intergenic 55.0%
TCCCACACATCCCATCAGAC+TGG - tig0024012:64226-64245 Msa1413180:intron 55.0%
CCCAGTCTGATGGGATGTGT+GGG + tig0024012:64230-64249 None:intergenic 55.0%
CCCACACATCCCATCAGACT+GGG - tig0024012:64227-64246 Msa1413180:intron 55.0%
ACCCAGTCTGATGGGATGTG+TGG + tig0024012:64231-64250 None:intergenic 55.0%
CTGTCAGGCCTGCTTTCTAC+AGG + tig0024012:64907-64926 None:intergenic 55.0%
CTAGCCACTGTTTCACGCCA+CGG + tig0024012:65023-65042 None:intergenic 55.0%
TCTGGACCACACGACACATC+TGG + tig0024012:65053-65072 None:intergenic 55.0%
GCCAAGACAAGACACGAAGG+CGG + tig0024012:65097-65116 None:intergenic 55.0%
TGCATCTTGGGTCCTGCGAT+AGG - tig0024012:65126-65145 Msa1413180:intron 55.0%
GTCAATAGTGCCGCATTGCG+GGG - tig0024012:65280-65299 Msa1413180:intron 55.0%
TCAATAGTGCCGCATTGCGG+GGG - tig0024012:65281-65300 Msa1413180:intron 55.0%
ACAGCCGCAACTCCATTCTG+GGG + tig0024012:65334-65353 None:intergenic 55.0%
GACAGCCGCAACTCCATTCT+GGG + tig0024012:65335-65354 None:intergenic 55.0%
!! TGGTTTTGCGTCTTGGGTGC+TGG - tig0024012:65385-65404 Msa1413180:intron 55.0%
! GGTTTTGCGTCTTGGGTGCT+GGG - tig0024012:65386-65405 Msa1413180:intron 55.0%
TATCTCCTGCAGGAGGAGCT+CGG + tig0024012:66069-66088 None:intergenic 55.0%
GAGCACGTAGGGCTTCTTGG+AGG - tig0024012:63103-63122 Msa1413180:intron 60.0%
GGCTTGTCACCTTGCCAAGC+AGG - tig0024012:64411-64430 Msa1413180:CDS 60.0%
CCACGGTAATGCGCCGCAAT+TGG + tig0024012:65006-65025 None:intergenic 60.0%
CCAATTGCGGCGCATTACCG+TGG - tig0024012:65003-65022 Msa1413180:intron 60.0%
TGCCTGCCAGATGTGTCGTG+TGG - tig0024012:65044-65063 Msa1413180:intron 60.0%
GACCACACGACACATCTGGC+AGG + tig0024012:65049-65068 None:intergenic 60.0%
GCCGCCTTCGTGTCTTGTCT+TGG - tig0024012:65093-65112 Msa1413180:intron 60.0%
CACTGTGACGCTCCTATCGC+AGG + tig0024012:65141-65160 None:intergenic 60.0%
CAATAGTGCCGCATTGCGGG+GGG - tig0024012:65282-65301 Msa1413180:intron 60.0%
! GGCTACTTTGCCCCCCAGAA+TGG - tig0024012:65319-65338 Msa1413180:intron 60.0%
TGCCCCCCAGAATGGAGTTG+CGG - tig0024012:65327-65346 Msa1413180:intron 60.0%
AGCCGCAACTCCATTCTGGG+GGG + tig0024012:65332-65351 None:intergenic 60.0%
CAGCCGCAACTCCATTCTGG+GGG + tig0024012:65333-65352 None:intergenic 60.0%
CGACAGCCGCAACTCCATTC+TGG + tig0024012:65336-65355 None:intergenic 60.0%
!! TGCGTCTTGGGTGCTGGGAT+AGG - tig0024012:65391-65410 Msa1413180:intron 60.0%
ATCTCCTGCAGGAGGAGCTC+GGG + tig0024012:66068-66087 None:intergenic 60.0%
GGAAGCCTCCACTGCTGCAG+AGG - tig0024012:64193-64212 Msa1413180:intron 65.0%
CTCAGCCTCTGCAGCAGTGG+AGG + tig0024012:64201-64220 None:intergenic 65.0%
TAGTGCCGCATTGCGGGGGG+TGG - tig0024012:65285-65304 Msa1413180:intron 70.0%
AGTGCCGCATTGCGGGGGGT+GGG - tig0024012:65286-65305 Msa1413180:intron 70.0%
TCACCCCACCCCCCGCAATG+CGG + tig0024012:65293-65312 None:intergenic 70.0%
CGGGGGGTGGGGTGAAACAG+TGG - tig0024012:65298-65317 Msa1413180:intron 70.0%
TCTGCCCGAGCTCCTCCTGC+AGG - tig0024012:66061-66080 Msa1413180:CDS 70.0%
GTGCCGCATTGCGGGGGGTG+GGG - tig0024012:65287-65306 Msa1413180:intron 75.0%
Chromosome Type Strat End Strand Name
tig0024012 gene 62476 66494 62476 ID=Msa1413180;Name=Msa1413180
tig0024012 mRNA 62476 66494 62476 ID=Msa1413180-mRNA-1;Parent=Msa1413180;Name=Msa1413180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=388|1|1|1|0.83|0.85|7|320|258
tig0024012 exon 62476 62798 62476 ID=Msa1413180-mRNA-1:exon:20996;Parent=Msa1413180-mRNA-1
tig0024012 exon 62874 62929 62874 ID=Msa1413180-mRNA-1:exon:20995;Parent=Msa1413180-mRNA-1
tig0024012 exon 64411 64559 64411 ID=Msa1413180-mRNA-1:exon:20994;Parent=Msa1413180-mRNA-1
tig0024012 exon 64667 64776 64667 ID=Msa1413180-mRNA-1:exon:20993;Parent=Msa1413180-mRNA-1
tig0024012 exon 65462 65549 65462 ID=Msa1413180-mRNA-1:exon:20992;Parent=Msa1413180-mRNA-1
tig0024012 exon 65660 65963 65660 ID=Msa1413180-mRNA-1:exon:20991;Parent=Msa1413180-mRNA-1
tig0024012 exon 66040 66494 66040 ID=Msa1413180-mRNA-1:exon:20990;Parent=Msa1413180-mRNA-1
tig0024012 five_prime_UTR 66107 66494 66107 ID=Msa1413180-mRNA-1:five_prime_utr;Parent=Msa1413180-mRNA-1
tig0024012 CDS 66040 66106 66040 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 65660 65963 65660 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 65462 65549 65462 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 64667 64776 64667 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 64411 64559 64411 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 62874 62929 62874 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 CDS 62796 62798 62796 ID=Msa1413180-mRNA-1:cds;Parent=Msa1413180-mRNA-1
tig0024012 three_prime_UTR 62476 62795 62476 ID=Msa1413180-mRNA-1:three_prime_utr;Parent=Msa1413180-mRNA-1
Gene Sequence

>Msa1413180

ATGGCTTCCCCTAACCAAAACTTCGTCTACACCGCCAAACTCGCTGAACAAGCCGAACGCTACGAAGAAATGGTTGATGCGATGAAGAATGTTGCGAAACTCAATGTTGAATTAACGGTTGAAGAGAGGAATCTGTTATCAGTTGCTTACAAGAATGTTGTTGGAGCACGTAGGGCTTCTTGGAGGATTCTTTCGTCAATTGAGCAGCGAGAAGAAGCGAAAGGGAGTGATGTGAATGTCAATCGGATCAAGGAGTATCGGAAAAAAGTTGAATCAGAGTTGGCTGATGTTTGTAATGATATTATGACTGTGATTGATGATCATCTTATTCCGAATTCTTCTGGTGAATCTAATGTGTTCTATTACAAAATGAAAGGCGATTATTATCGTTATCTGGCTGAGTTTAAGAGCGGTGATGAGAGGAAAGAGGCTGCTGATCAATCTTTGAAAGCGTATCAGGAAGCCTCCACTGCTGCAGAGGCTGAGTTACCTCCCACACATCCCATCAGACTGGGTTTGGCTTTGAACTTCTCTGTGTTCTATTATGAAATCTTGAACTCTCCTGAAAGGGCTTGTCACCTTGCCAAGCAGGCATTTGATGTAGCAATCGCTGAGTTGGATTCTCTCAATGAGGAATCTTACAAAGACAGCACACTGATCATGCAGCTTCTGAGGGACAACCTGACATTGTGGACTTCTGACATTCCTGAGGAAGGAGTCGAGGAACAAAAGGCAGAATCTGCCCGAGCTCCTCCTGCAGGAGATAATGCAGAGTAA
Protein sequence

>Msa1413180

MASPNQNFVYTAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVAYKNVVGARRASWRILSSIEQREEAKGSDVNVNRIKEYRKKVESELADVCNDIMTVIDDHLIPNSSGESNVFYYKMKGDYYRYLAEFKSGDERKEAADQSLKAYQEASTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEEGVEEQKAESARAPPAGDNAE*