AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236420 MtrunA17_Chr8g0346441 97.515 1006 25 0 1 1006 1 1006 0.0 2004
Msa1236420 MtrunA17_Chr7g0275961 70.547 1005 292 2 2 1006 1 1001 0.0 1430
Msa1236420 MtrunA17_Chr1g0188041 28.233 1013 677 20 11 996 8 997 6.93e-106 353
Msa1236420 MtrunA17_Chr3g0084371 34.337 664 420 6 345 1006 184 833 1.75e-103 343
Msa1236420 MtrunA17_Chr3g0144071 27.960 794 518 24 257 1006 27 810 3.72e-71 253
Msa1236420 MtrunA17_Chr4g0031431 24.329 596 394 18 37 590 27 607 1.08e-20 97.8
Msa1236420 MtrunA17_Chr7g0248251 25.052 483 318 13 81 555 98 544 5.56e-20 95.5
Msa1236420 MtrunA17_Chr7g0237931 25.414 362 223 8 261 601 239 574 4.94e-19 92.4
Msa1236420 MtrunA17_Chr4g0044411 24.725 364 228 8 261 612 275 604 2.21e-16 84.0
Msa1236420 MtrunA17_Chr2g0284461 23.355 471 302 10 89 510 112 572 2.61e-16 84.0
Msa1236420 MtrunA17_Chr7g0234671 26.471 340 213 12 263 595 82 391 9.52e-16 81.3
Msa1236420 MtrunA17_Chr8g0373031 23.209 349 214 9 23 325 1 341 6.15e-15 79.7
Msa1236420 MtrunA17_Chr3g0106931 24.926 337 206 13 19 338 6 312 3.42e-14 77.4
Msa1236420 MtrunA17_Chr4g0048811 26.991 226 125 5 261 483 7 195 7.15e-14 73.9
Msa1236420 MtrunA17_Chr5g0434171 25.431 232 141 7 263 467 39 265 9.19e-14 74.7
Msa1236420 MtrunA17_Chr4g0013091 22.676 441 272 16 88 478 145 566 9.53e-14 75.9
Msa1236420 MtrunA17_Chr4g0059201 23.409 487 322 16 93 541 150 623 2.96e-13 73.9
Msa1236420 MtrunA17_Chr5g0413681 21.513 423 288 11 93 498 109 504 6.98e-13 72.8
Msa1236420 MtrunA17_Chr1g0199321 27.946 297 175 8 263 550 251 517 9.37e-13 72.4
Msa1236420 MtrunA17_Chr3g0129811 24.699 332 180 10 263 566 87 376 2.09e-12 70.9
Msa1236420 MtrunA17_Chr3g0079051 32.335 167 89 5 174 328 653 807 2.68e-12 71.2
Msa1236420 MtrunA17_Chr2g0280671 24.302 358 242 9 260 596 16 365 3.70e-12 69.3
Msa1236420 MtrunA17_Chr8g0384041 43.077 65 37 0 263 327 14 78 8.35e-12 68.6
Msa1236420 MtrunA17_Chr3g0110121 39.726 73 44 0 262 334 39 111 2.92e-11 67.0
Msa1236420 MtrunA17_Chr8g0390311 28.467 137 94 3 194 329 333 466 2.93e-11 68.2
Msa1236420 MtrunA17_Chr5g0437411 26.490 302 177 8 263 525 297 592 2.94e-11 67.8
Msa1236420 MtrunA17_Chr7g0214471 46.269 67 35 1 261 326 597 663 3.39e-11 67.8
Msa1236420 MtrunA17_Chr4g0044631 39.474 76 39 1 257 325 5 80 4.45e-11 66.2
Msa1236420 MtrunA17_Chr1g0183781 23.457 324 220 10 10 325 4 307 6.81e-11 66.6
Msa1236420 MtrunA17_Chr3g0117851 26.667 225 148 5 263 487 279 486 7.58e-11 66.2
Msa1236420 MtrunA17_Chr1g0152291 31.429 140 86 3 263 402 49 178 8.28e-11 65.5
Msa1236420 MtrunA17_Chr7g0261371 28.824 170 111 3 162 331 154 313 9.77e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236420 AT1G76390.1 28.535 785 518 25 261 1006 27 807 4.53e-62 227
Msa1236420 AT1G76390.2 28.535 785 518 25 261 1006 27 807 4.53e-62 227
Msa1236420 AT1G20780.1 27.821 780 522 22 261 1006 25 797 5.91e-58 214
Msa1236420 AT1G20780.2 27.821 780 522 22 261 1006 25 797 5.91e-58 214
Msa1236420 AT1G20780.3 27.821 780 522 22 261 1006 25 797 5.91e-58 214
Msa1236420 AT1G68940.1 24.412 893 596 27 170 1006 216 1085 1.56e-51 197
Msa1236420 AT1G68940.2 25.123 812 544 24 170 935 216 1009 7.89e-50 192
Msa1236420 AT1G68940.3 25.123 812 544 24 170 935 163 956 1.01e-49 192
Msa1236420 AT5G42340.1 26.104 521 303 18 16 492 54 536 7.93e-22 102
Msa1236420 AT3G46510.1 22.973 518 335 13 13 486 6 503 1.23e-19 95.1
Msa1236420 AT1G29340.1 24.411 467 300 10 89 509 124 583 3.08e-19 94.0
Msa1236420 AT1G60190.1 23.577 492 327 14 13 465 27 508 4.63e-18 90.1
Msa1236420 AT5G67340.1 22.735 585 373 15 50 591 48 596 4.80e-18 90.1
Msa1236420 AT5G67340.2 22.735 585 373 15 50 591 48 596 4.80e-18 90.1
Msa1236420 AT1G71020.2 25.824 364 226 11 261 612 97 428 1.61e-17 87.4
Msa1236420 AT1G71020.1 25.824 364 226 11 261 612 245 576 3.05e-17 87.0
Msa1236420 AT1G23030.1 26.361 349 231 7 263 590 245 588 8.76e-17 85.5
Msa1236420 AT2G28830.1 29.845 258 152 6 256 486 181 436 3.87e-16 83.6
Msa1236420 AT1G24330.1 22.876 612 344 18 20 512 3 605 1.07e-15 82.4
Msa1236420 AT1G24330.2 22.876 612 344 18 20 512 3 605 1.07e-15 82.4
Msa1236420 AT5G01830.1 22.976 457 295 16 88 505 109 547 5.24e-15 80.1
Msa1236420 AT1G67530.3 24.709 344 211 10 25 329 8 342 1.14e-14 78.6
Msa1236420 AT1G67530.2 24.709 344 211 10 25 329 8 342 2.30e-14 78.2
Msa1236420 AT1G67530.1 24.709 344 211 10 25 329 8 342 2.30e-14 78.2
Msa1236420 AT1G67530.4 24.709 344 211 10 25 329 8 342 2.30e-14 78.2
Msa1236420 AT3G54790.3 25.279 269 160 10 91 348 86 324 1.77e-13 75.5
Msa1236420 AT3G54790.1 25.279 269 160 10 91 348 86 324 1.77e-13 75.5
Msa1236420 AT3G54790.2 25.279 269 160 10 91 348 50 288 2.67e-13 74.7
Msa1236420 AT1G49780.1 42.105 76 37 1 257 325 5 80 7.24e-13 72.4
Msa1236420 AT3G07360.1 23.971 413 231 14 187 587 4 345 7.35e-13 72.4
Msa1236420 AT4G36550.1 45.070 71 39 0 261 331 221 291 1.99e-12 72.0
Msa1236420 AT1G10560.1 24.854 342 226 10 14 332 28 361 2.52e-12 71.6
Msa1236420 AT5G51270.2 36.937 111 52 3 223 329 708 804 1.78e-11 68.9
Msa1236420 AT5G51270.1 36.937 111 52 3 223 329 708 804 1.78e-11 68.9
Msa1236420 AT3G61390.4 42.647 68 39 0 258 325 277 344 3.72e-11 66.6
Msa1236420 AT2G23140.1 29.143 175 111 4 156 329 141 303 3.99e-11 67.8
Msa1236420 AT2G23140.1 27.604 192 138 1 401 591 527 718 8.23e-11 66.6
Msa1236420 AT2G23140.2 29.143 175 111 4 156 329 138 300 4.02e-11 67.8
Msa1236420 AT2G23140.2 27.604 192 138 1 401 591 524 715 8.50e-11 66.6
Msa1236420 AT2G23140.4 29.143 175 111 4 156 329 138 300 4.02e-11 67.8
Msa1236420 AT2G23140.4 27.604 192 138 1 401 591 524 715 8.50e-11 66.6
Msa1236420 AT3G61390.2 42.647 68 39 0 258 325 352 419 5.22e-11 66.6
Msa1236420 AT5G64660.1 41.538 65 38 0 263 327 14 78 6.46e-11 66.2
Msa1236420 AT5G09800.1 41.538 65 38 0 263 327 15 79 9.42e-11 65.5

Find 205 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATTCACTTCTTCAAAA+TGG 0.172179 8_2:+15352735 Msa1236420:five_prime_UTR
TTCTCGCGCCAAATCATATT+TGG 0.186259 8_2:-15354801 None:intergenic
TGAGTTATCTGATCAATTTC+TGG 0.187668 8_2:-15356374 None:intergenic
TAAGGAACTTAGTTCTTATT+TGG 0.189177 8_2:+15353508 Msa1236420:CDS
TATGGAGAAAGCTGGATTTA+AGG 0.218387 8_2:+15353817 Msa1236420:CDS
GCATACACACATCAAGTTTA+TGG 0.223246 8_2:+15355457 Msa1236420:CDS
CTATTTCCTCAGATTATTAC+TGG 0.252412 8_2:+15357319 Msa1236420:three_prime_UTR
TATCAGATTTAGACCTTGTT+TGG 0.255235 8_2:+15353150 Msa1236420:five_prime_UTR
CGCGGAGTCTCAAAACATTT+TGG 0.257727 8_2:-15357418 None:intergenic
CAAGTTCTTATACAAATTCT+TGG 0.261077 8_2:+15354520 Msa1236420:CDS
TTTAATTTCTTCCAATATTC+CGG 0.265541 8_2:-15353780 None:intergenic
TGGAGTCTGTGAGGCTTCTT+TGG 0.269871 8_2:+15356829 Msa1236420:CDS
ACAGCTTATTTAAGTTCTTA+TGG 0.270154 8_2:+15353177 Msa1236420:five_prime_UTR
TCTATCTTTCCATTCTTCTA+TGG 0.273578 8_2:-15354350 None:intergenic
ATTGATTCATGGGAACAAAA+AGG 0.288419 8_2:+15353331 Msa1236420:five_prime_UTR
AAGCAAAGAAGAGTTCAATT+TGG 0.293163 8_2:-15352715 None:intergenic
GTTCTTACATAATGATCTTC+AGG 0.295740 8_2:+15355320 Msa1236420:CDS
ACTTTATAGCACTTGCTCTT+AGG 0.295870 8_2:-15356205 None:intergenic
AATATTGGAAGAAATTAAAA+AGG 0.297339 8_2:+15353784 Msa1236420:CDS
AGACTCCGCGTTTCCGCATT+TGG 0.306915 8_2:+15357431 Msa1236420:three_prime_UTR
GTTCTATGTAGAAAACAATT+TGG 0.307397 8_2:+15353078 Msa1236420:intron
TTCTCAGCTCCGAGCGAAAT+TGG 0.307554 8_2:+15356704 Msa1236420:CDS
AAGTCCATTTCTGTTTAAAC+TGG 0.309308 8_2:-15355379 None:intergenic
TGAATTATCCAAATATGATT+TGG 0.309894 8_2:+15354793 Msa1236420:CDS
GGTTGTGTCACACTGATTAA+AGG 0.311802 8_2:-15355588 None:intergenic
TTCCTCAATTCTTTCAAAAT+CGG 0.318543 8_2:-15353542 None:intergenic
TCAAGGTTGCATACTTCTAT+TGG 0.318559 8_2:+15354838 Msa1236420:CDS
TTTGCGAAACGGCAATCTTT+AGG 0.329672 8_2:+15354124 Msa1236420:CDS
GGATCAAATCATTGCTTTGT+TGG 0.331319 8_2:+15354054 Msa1236420:CDS
AAGTACACCACCGTCAAATA+AGG 0.337044 8_2:-15355280 None:intergenic
TGCTCGTGTTGATAAGAAAA+AGG 0.337238 8_2:+15354015 Msa1236420:CDS
TCACACAACCTAACCAATTC+TGG 0.340227 8_2:-15356167 None:intergenic
TTAGTGCAGTTGCTTGAAAT+TGG 0.341628 8_2:+15356575 Msa1236420:CDS
AATCTTGGAGAATCTGATTA+TGG 0.345438 8_2:+15356809 Msa1236420:CDS
GGCCAATACATTAGCCGAAA+TGG 0.346085 8_2:+15355233 Msa1236420:CDS
TTTCTTAGTTCTACCTCTCT+TGG 0.346307 8_2:+15356941 Msa1236420:CDS
TATGCAAATTGCAACCCTTT+TGG 0.346687 8_2:+15353291 Msa1236420:five_prime_UTR
TTGTTAGTGTTATTGATTCA+TGG 0.348618 8_2:+15353320 Msa1236420:five_prime_UTR
ATCTTTAGGTACTCGAATCT+TGG 0.353618 8_2:+15354138 Msa1236420:CDS
TGCAGCAAGTTGCATAATTA+TGG 0.355094 8_2:-15355493 None:intergenic
AGCAATTTGAGGTAATTAAC+AGG 0.359318 8_2:-15357541 None:intergenic
TTTATTTGTTAATGAATTGT+AGG 0.364173 8_2:+15353672 Msa1236420:CDS
GTTCGAGAAACCGTGATATA+AGG 0.366447 8_2:+15354542 Msa1236420:CDS
TTCCATTTCGGCTAATGTAT+TGG 0.367156 8_2:-15355235 None:intergenic
TCTCAAATCATAGAAACTAT+TGG 0.367335 8_2:+15353437 Msa1236420:CDS
TGACTGACACAAGGCGTAAA+AGG 0.371641 8_2:-15355637 None:intergenic
TGTGTTGGTGTGGTCATATC+TGG 0.371706 8_2:+15357347 Msa1236420:three_prime_UTR
CTTCTTCCTTTAGCCGCATC+AGG 0.373069 8_2:+15353749 Msa1236420:CDS
AGGTCTTTCAGCCGGAATAT+TGG 0.377612 8_2:+15353769 Msa1236420:CDS
TGAACATATTTATACATGAT+TGG 0.386278 8_2:-15356422 None:intergenic
GGAATTAACTGACCACAATA+AGG 0.387274 8_2:+15355254 Msa1236420:CDS
AGACCGATTCCGAAGCAAAA+AGG 0.388092 8_2:+15356668 Msa1236420:CDS
TTCTTAGTTCTACCTCTCTT+GGG 0.394620 8_2:+15356942 Msa1236420:CDS
ATTCATTGAACAGAAGGGTT+TGG 0.398094 8_2:+15353263 Msa1236420:five_prime_UTR
GAAAATCGAGTCAGGGATAA+GGG 0.403660 8_2:+15353868 Msa1236420:CDS
CATACACACATCAAGTTTAT+GGG 0.404356 8_2:+15355458 Msa1236420:CDS
AGATGATGTAAAGATGATTA+TGG 0.405222 8_2:+15355212 Msa1236420:CDS
CTATCCAGTTTAAACAGAAA+TGG 0.406424 8_2:+15355375 Msa1236420:CDS
TCATATCTGGTGTCCGTGTC+TGG 0.411523 8_2:+15357360 Msa1236420:three_prime_UTR
CTAGTAACAAAACCGGCGTT+TGG 0.413747 8_2:-15355536 None:intergenic
GTGGTCAGTTAATTCCATTT+CGG 0.414212 8_2:-15355247 None:intergenic
CATGTGGAATAGCCTTCTTT+TGG 0.416221 8_2:+15357204 Msa1236420:three_prime_UTR
CTTCATCAGATGAGGATTGT+AGG 0.416308 8_2:-15356313 None:intergenic
CAGCTATACCAGAATTGGTT+AGG 0.419391 8_2:+15356159 Msa1236420:CDS
CACTAACAAATGTTGCCAAA+AGG 0.419520 8_2:-15353306 None:intergenic
CAAAAGGGTTCTCAAATTCA+TGG 0.420706 8_2:+15352831 Msa1236420:five_prime_UTR
TGATCTGATGAAGTTTCAAC+AGG 0.425758 8_2:-15354211 None:intergenic
AGCTGCAAACCTACTTGCTC+TGG 0.425914 8_2:+15353628 Msa1236420:CDS
TCTGATCAATTTCTGGAAGA+TGG 0.428541 8_2:-15356367 None:intergenic
GTGCTCAGCTATACCAGAAT+TGG 0.431004 8_2:+15356154 Msa1236420:intron
CCATTCTCTTGGACGACGTC+AGG 0.431093 8_2:+15354739 Msa1236420:CDS
TAGATTCTTAAGAGCCTTTG+TGG 0.431900 8_2:-15355355 None:intergenic
AGAAAATCGAGTCAGGGATA+AGG 0.432371 8_2:+15353867 Msa1236420:CDS
TATTTCAGTTTCCTTTCGTT+CGG 0.443580 8_2:-15354100 None:intergenic
GGACCACTCACAAGAAATCT+TGG 0.446995 8_2:+15356794 Msa1236420:CDS
ACTAACAAATGTTGCCAAAA+GGG 0.447272 8_2:-15353305 None:intergenic
TGTTAGTGTTATTGATTCAT+GGG 0.452202 8_2:+15353321 Msa1236420:five_prime_UTR
TCCTATCACACATGATGTTA+TGG 0.452740 8_2:+15354183 Msa1236420:CDS
TCTCTCTTTAAGTCTTTCTC+AGG 0.453038 8_2:+15352860 Msa1236420:five_prime_UTR
TCAAATGTACAAGCAATTTG+AGG 0.454416 8_2:-15357552 None:intergenic
TTCGCGATTCATAATATCAA+TGG 0.454754 8_2:-15353600 None:intergenic
AAAGGCTGAAGCTATGCAAA+TGG 0.456067 8_2:+15354033 Msa1236420:CDS
AGAAGAAAATAGGTGCAAGT+TGG 0.458164 8_2:-15352943 None:intergenic
AATCTCATTGCTAACGCTGT+TGG 0.459825 8_2:+15353929 Msa1236420:CDS
GCACTGAAACTTCATATTCA+AGG 0.466646 8_2:+15357247 Msa1236420:three_prime_UTR
AGTCTCTACATGCTTTAGAA+AGG 0.467873 8_2:+15356975 Msa1236420:CDS
ATCAACATTCTCTACTATGA+TGG 0.468562 8_2:-15356261 None:intergenic
GAATCGATAGTCCATTCTCT+TGG 0.470166 8_2:+15354728 Msa1236420:CDS
ACCATAACATCATGTGTGAT+AGG 0.470871 8_2:-15354184 None:intergenic
GAAATTGGCTGTAAAGTTCA+TGG 0.472815 8_2:+15356719 Msa1236420:CDS
GTTGTGTCACACTGATTAAA+GGG 0.473597 8_2:-15355587 None:intergenic
CCTGACGTCGTCCAAGAGAA+TGG 0.475497 8_2:-15354739 None:intergenic
TGGATTTAAGGCTGCGGTAG+CGG 0.475565 8_2:+15353829 Msa1236420:CDS
CTCAAAACCGATGTATCTAA+AGG 0.478675 8_2:-15354304 None:intergenic
ATTGTAGGTCGATTGTAAAT+CGG 0.479909 8_2:+15353687 Msa1236420:CDS
GAAGAGTTCAATTTGGAAAG+TGG 0.480659 8_2:-15352708 None:intergenic
GAACACATTGGAAAAGTTCA+AGG 0.482125 8_2:+15354821 Msa1236420:CDS
AGATGTGTATATATAAAGAT+AGG 0.483572 8_2:+15357482 Msa1236420:three_prime_UTR
TCACACTGATTAAAGGGAAA+AGG 0.486884 8_2:-15355581 None:intergenic
TGTGATAATATGGAGAAAGC+TGG 0.488266 8_2:+15353809 Msa1236420:CDS
TAAAGATGCAACTGAAGTAT+TGG 0.488860 8_2:+15354895 Msa1236420:CDS
GCAGAGTTCAAACAGTTGTA+TGG 0.490896 8_2:+15357010 Msa1236420:CDS
AGAGGAAATACATTCTGCTA+TGG 0.492784 8_2:+15356334 Msa1236420:CDS
CTATTGGTGACTATGTCTAA+TGG 0.493151 8_2:+15354854 Msa1236420:CDS
TATAAAGATAGGAGCTCCAT+TGG 0.493151 8_2:+15357493 Msa1236420:three_prime_UTR
AGAGAAGTGCAATAGAGAAG+TGG 0.495497 8_2:+15354242 Msa1236420:CDS
GCGAGCAGAGAGAGCAACAC+AGG 0.499770 8_2:+15354470 Msa1236420:CDS
ATAGAGAAGTGGTTTGAAGA+AGG 0.503302 8_2:+15354253 Msa1236420:CDS
GCTTTATTAACATTGATTGA+AGG 0.507058 8_2:+15356854 Msa1236420:CDS
TCAGAATCTAGTAACAAAAC+CGG 0.507158 8_2:-15355543 None:intergenic
TGCCAATACTCTTGCTGACA+TGG 0.507732 8_2:-15357092 None:intergenic
TGTAAGAACAAGTGAAGAAG+AGG 0.509834 8_2:-15355306 None:intergenic
GCCGCATCAGGTCTTTCAGC+CGG 0.509865 8_2:+15353761 Msa1236420:CDS
AGAGAGAGCAACACAGGGAA+TGG 0.509905 8_2:+15354476 Msa1236420:CDS
AGAAACATTCATTGAACAGA+AGG 0.511801 8_2:+15353257 Msa1236420:five_prime_UTR
GAAAGACCTGATGCGGCTAA+AGG 0.513497 8_2:-15353755 None:intergenic
AACTGAAATACTTTGCGAAA+CGG 0.517151 8_2:+15354113 Msa1236420:CDS
ATCCATGTCAGCAAGAGTAT+TGG 0.518034 8_2:+15357090 Msa1236420:CDS
AGTTTCAGTGCTACATACAT+AGG 0.518093 8_2:-15357235 None:intergenic
TTTCCTTTCGTTCGGTGATG+AGG 0.520051 8_2:-15354092 None:intergenic
CACAAGTGTGAAGGTCATAT+CGG 0.522103 8_2:-15357281 None:intergenic
AGTTACTCCTTTGAAGATCT+CGG 0.524906 8_2:-15356457 None:intergenic
TTATTACTGGTGCTATGTGT+TGG 0.525138 8_2:+15357332 Msa1236420:three_prime_UTR
ACAATCCTCATCTGATGAAG+AGG 0.529667 8_2:+15356316 Msa1236420:CDS
AAAAGATAATGAAGAAGCTA+AGG 0.530212 8_2:+15354597 Msa1236420:CDS
TTACTGCAACGTCTCTCCAC+AGG 0.531709 8_2:+15354980 Msa1236420:CDS
TGAAACAATCCATAGAAGAA+TGG 0.531982 8_2:+15354341 Msa1236420:CDS
GAGGAAATACATTCTGCTAT+GGG 0.532753 8_2:+15356335 Msa1236420:CDS
TCTCCAAGATTTCTTGTGAG+TGG 0.533221 8_2:-15356797 None:intergenic
TTGATGTGTGTATGCTATGA+TGG 0.534750 8_2:-15355449 None:intergenic
AACTTAGTCGAGAAAGCAGT+TGG 0.540179 8_2:+15356476 Msa1236420:CDS
AAATGAGAAGTCGACGATGA+AGG 0.546935 8_2:+15353958 Msa1236420:CDS
AATAAGGAGTCCTTATTTGA+CGG 0.547052 8_2:+15355270 Msa1236420:CDS
GTTGATTCCTTTAGATACAT+CGG 0.548864 8_2:+15354297 Msa1236420:CDS
GACTTAACTCAGAGGAGTAA+TGG 0.550076 8_2:+15357058 Msa1236420:CDS
TAGGTTAAAACACCAAAAGA+AGG 0.550348 8_2:-15357216 None:intergenic
TATTTCCTCTTCATCAGATG+AGG 0.554394 8_2:-15356321 None:intergenic
TTGGACGACGTCAGGAGGAA+AGG 0.555434 8_2:+15354747 Msa1236420:CDS
TTCTCTTGGACGACGTCAGG+AGG 0.555553 8_2:+15354742 Msa1236420:CDS
TGAGAAATTGCAGTTGAGGT+AGG 0.556553 8_2:-15353419 None:intergenic
GAAGGTGAAAGACTAGAGAG+TGG 0.557912 8_2:+15356872 Msa1236420:CDS
GAAACATTCATTGAACAGAA+GGG 0.558272 8_2:+15353258 Msa1236420:five_prime_UTR
CAGTTCCAACACACTTGGAG+TGG 0.563324 8_2:+15356516 Msa1236420:CDS
ACTCAATGGATTCTAGATGC+TGG 0.565189 8_2:+15356392 Msa1236420:CDS
CAGCCTCATCACCGAACGAA+AGG 0.569243 8_2:+15354089 Msa1236420:CDS
TGATCAGAATGTTATACTGA+TGG 0.569744 8_2:+15354934 Msa1236420:CDS
TAGCTTAGCTTGCATAGCAA+AGG 0.569883 8_2:-15357179 None:intergenic
TTAATCAGTGTGACACAACC+TGG 0.570231 8_2:+15355591 Msa1236420:CDS
GAGCATGATTCCTTATATCA+CGG 0.577282 8_2:-15354552 None:intergenic
GATTTGAGAAATTGCAGTTG+AGG 0.578462 8_2:-15353423 None:intergenic
ATTGCTGCATTGTAAGATGA+TGG 0.578760 8_2:+15353373 Msa1236420:exon
TGGAACTGTAAAACGACGTA+AGG 0.584828 8_2:-15356501 None:intergenic
TGTGTATGCTATGATGGTAA+AGG 0.588633 8_2:-15355443 None:intergenic
TCTAAAGGAATCAACGTCAA+AGG 0.588862 8_2:-15354289 None:intergenic
AACTAGAGGCATTTGAGCTG+AGG 0.594631 8_2:-15357035 None:intergenic
TCCGGCTGAAAGACCTGATG+CGG 0.596788 8_2:-15353762 None:intergenic
TATCAAGACGAAGCTAAATG+AGG 0.597576 8_2:+15355674 Msa1236420:CDS
GAATGTTATACTGATGGCAA+AGG 0.598582 8_2:+15354940 Msa1236420:CDS
ATCAAGTGTGGAACCAGACA+CGG 0.598838 8_2:-15357373 None:intergenic
GGTGAAAGACTAGAGAGTGG+TGG 0.599671 8_2:+15356875 Msa1236420:CDS
ATATTCAGAGAAAGCAAACA+AGG 0.601328 8_2:-15352906 None:intergenic
GGACAATAAAATGACTGTAG+AGG 0.605850 8_2:-15354163 None:intergenic
CAAATAAGGACTCCTTATTG+TGG 0.607893 8_2:-15355266 None:intergenic
ACTTTACAGCCAATTTCGCT+CGG 0.608017 8_2:-15356713 None:intergenic
GAAAGCTGGATTTAAGGCTG+CGG 0.609553 8_2:+15353823 Msa1236420:CDS
GTAGAGACCGAGATCTTCAA+AGG 0.609913 8_2:+15356450 Msa1236420:CDS
AAATTGATCAGATAACTCAA+TGG 0.612214 8_2:+15356378 Msa1236420:CDS
GTACATCATTAGCACTGCAT+AGG 0.612506 8_2:-15353466 None:intergenic
CTCTCAAGATATCCAAACGC+CGG 0.616232 8_2:+15355524 Msa1236420:CDS
TTGGCTGTAAAGTTCATGGA+GGG 0.616439 8_2:+15356723 Msa1236420:CDS
ATAAGCTGTTTATCCAAACA+AGG 0.616722 8_2:-15353163 None:intergenic
CGAGCAGAGAGAGCAACACA+GGG 0.621568 8_2:+15354471 Msa1236420:CDS
CTCTGAGTTAAGTCAACTAG+AGG 0.627340 8_2:-15357049 None:intergenic
ACTGGTGCTATGTGTTGGTG+TGG 0.628438 8_2:+15357337 Msa1236420:three_prime_UTR
GAGGAACATCATATCAAGTG+TGG 0.630097 8_2:-15357385 None:intergenic
GGTGAAAACAGTGGCCACAA+AGG 0.630926 8_2:+15355341 Msa1236420:CDS
ACTTGAAATGATTCGACAAG+GGG 0.632906 8_2:+15355398 Msa1236420:CDS
GACTTGAAATGATTCGACAA+GGG 0.634541 8_2:+15355397 Msa1236420:CDS
GGACTTGAAATGATTCGACA+AGG 0.635847 8_2:+15355396 Msa1236420:CDS
TCATGAGAGCAAGCCAAATG+CGG 0.637834 8_2:-15357444 None:intergenic
ATGTATAAATATGTTCAAGA+CGG 0.640844 8_2:+15356428 Msa1236420:CDS
TACGACATTCCAGAGCAAGT+AGG 0.646446 8_2:-15353637 None:intergenic
AAGGAGATAAGCAAGGCGCT+CGG 0.649353 8_2:+15353725 Msa1236420:CDS
CAAAAGAAGGCTATTCCACA+TGG 0.651320 8_2:-15357203 None:intergenic
AGACGAAGGTGACTGACACA+AGG 0.652496 8_2:-15355646 None:intergenic
GATTCATAATATCAATGGCA+CGG 0.654224 8_2:-15353595 None:intergenic
TATCACACATGATGTTATGG+TGG 0.655301 8_2:+15354186 Msa1236420:CDS
GCAAGCCAAATGCGGAAACG+CGG 0.659149 8_2:-15357436 None:intergenic
GATTTGGCGCGAGAACACAT+TGG 0.659835 8_2:+15354809 Msa1236420:CDS
CAGGGAATGGATGATACTTG+AGG 0.659956 8_2:+15354489 Msa1236420:CDS
AAGGAGTCCTTATTTGACGG+TGG 0.660568 8_2:+15355273 Msa1236420:CDS
ATCTGATTATGGAGTCTGTG+AGG 0.673837 8_2:+15356820 Msa1236420:CDS
GTCTTGATATTTGAAGACGA+AGG 0.676219 8_2:-15355660 None:intergenic
TGGCTGTAAAGTTCATGGAG+GGG 0.683620 8_2:+15356724 Msa1236420:CDS
ATAGCACCAGTAATAATCTG+AGG 0.683998 8_2:-15357325 None:intergenic
TCACACGAAGGAGATAAGCA+AGG 0.685403 8_2:+15353718 Msa1236420:CDS
CTCTAGTTGACTTAACTCAG+AGG 0.686980 8_2:+15357050 Msa1236420:CDS
TTGTGTAGTCACAAGTGTGA+AGG 0.692991 8_2:-15357290 None:intergenic
ATTGGCTGTAAAGTTCATGG+AGG 0.694336 8_2:+15356722 Msa1236420:CDS
TATTCAGAGAAAGCAAACAA+GGG 0.697299 8_2:-15352905 None:intergenic
TCGGTTAGAAAGTCACACGA+AGG 0.704541 8_2:+15353706 Msa1236420:CDS
TGATCTTCAGGTGAAAACAG+TGG 0.704631 8_2:+15355332 Msa1236420:CDS
TGCAAGCTAAGCTAACCATG+TGG 0.721667 8_2:+15357188 Msa1236420:three_prime_UTR
GGAATGTCGTAAGAAGAGCA+AGG 0.723044 8_2:+15353649 Msa1236420:CDS
TGGTAAAGGAGATCGAGCAA+CGG 0.729976 8_2:-15355429 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAAGAAATTTTATTATTAA+TGG - chr8_2:15356929-15356948 None:intergenic 10.0%
!!! TTTATTTGTTAATGAATTGT+AGG + chr8_2:15353672-15353691 Msa1236420:CDS 15.0%
!! AATATTGGAAGAAATTAAAA+AGG + chr8_2:15353784-15353803 Msa1236420:CDS 15.0%
!! ACTAGTATTAAAATAGAAAA+CGG - chr8_2:15354643-15354662 None:intergenic 15.0%
!!! TCATATCTTTTATAAGAAAA+AGG - chr8_2:15355065-15355084 None:intergenic 15.0%
!! AAAATATCATTTCTGATATT+TGG - chr8_2:15355113-15355132 None:intergenic 15.0%
!!! AATGACATTTTATAATTTTG+GGG - chr8_2:15355816-15355835 None:intergenic 15.0%
!!! GAATGACATTTTATAATTTT+GGG - chr8_2:15355817-15355836 None:intergenic 15.0%
!!! TGAATGACATTTTATAATTT+TGG - chr8_2:15355818-15355837 None:intergenic 15.0%
!!! TTTTTTTAATACAAATACTG+TGG + chr8_2:15357599-15357618 Msa1236420:three_prime_UTR 15.0%
!! GACATAAAAAAGAAGAAAAT+AGG - chr8_2:15352956-15352975 None:intergenic 20.0%
!! GTTACTATATCAAAAACTAA+TGG - chr8_2:15352995-15353014 None:intergenic 20.0%
!!! TGTGAATAAAGATAGTTTTA+AGG + chr8_2:15353490-15353509 Msa1236420:CDS 20.0%
!!! TTTAATTTCTTCCAATATTC+CGG - chr8_2:15353783-15353802 None:intergenic 20.0%
!! TAAAAAGGTTTGTGATAATA+TGG + chr8_2:15353799-15353818 Msa1236420:CDS 20.0%
!! AAAGAAAAAATACATCAGTT+TGG + chr8_2:15354400-15354419 Msa1236420:CDS 20.0%
!! TGAATTATCCAAATATGATT+TGG + chr8_2:15354793-15354812 Msa1236420:CDS 20.0%
!! ATAAGAAAAAGGATTAGAAA+TGG - chr8_2:15355054-15355073 None:intergenic 20.0%
!! TCGAAAACTATTTATAACTA+CGG - chr8_2:15355715-15355734 None:intergenic 20.0%
!! AGACAATAAAAGTTAACAAA+TGG + chr8_2:15355974-15355993 Msa1236420:intron 20.0%
!! ATGAAAATAGTTTCAACATT+TGG - chr8_2:15356080-15356099 None:intergenic 20.0%
!! TGAACATATTTATACATGAT+TGG - chr8_2:15356425-15356444 None:intergenic 20.0%
!! ATGTATAAATATGTTCAAGA+CGG + chr8_2:15356428-15356447 Msa1236420:CDS 20.0%
!! AGATGTGTATATATAAAGAT+AGG + chr8_2:15357482-15357501 Msa1236420:three_prime_UTR 20.0%
!!! ATGCATTGATTTTTTTCTTT+GGG + chr8_2:15357518-15357537 Msa1236420:three_prime_UTR 20.0%
! ATCTTAGCAAAAACAATGAA+AGG - chr8_2:15352782-15352801 None:intergenic 25.0%
!! AAAGTTTCTTTTGCTCAAAA+GGG + chr8_2:15352816-15352835 Msa1236420:five_prime_UTR 25.0%
! GTTCTATGTAGAAAACAATT+TGG + chr8_2:15353078-15353097 Msa1236420:intron 25.0%
!! ACAGCTTATTTAAGTTCTTA+TGG + chr8_2:15353177-15353196 Msa1236420:five_prime_UTR 25.0%
!!! TTGTTAGTGTTATTGATTCA+TGG + chr8_2:15353320-15353339 Msa1236420:five_prime_UTR 25.0%
!!! TGTTAGTGTTATTGATTCAT+GGG + chr8_2:15353321-15353340 Msa1236420:five_prime_UTR 25.0%
! TCTCAAATCATAGAAACTAT+TGG + chr8_2:15353437-15353456 Msa1236420:CDS 25.0%
!! TAAGGAACTTAGTTCTTATT+TGG + chr8_2:15353508-15353527 Msa1236420:CDS 25.0%
! TTCCTCAATTCTTTCAAAAT+CGG - chr8_2:15353545-15353564 None:intergenic 25.0%
!!! GATTGTTTCAAAGTTTTGTT+AGG - chr8_2:15354331-15354350 None:intergenic 25.0%
! CAAGTTCTTATACAAATTCT+TGG + chr8_2:15354520-15354539 Msa1236420:CDS 25.0%
! AAAAGATAATGAAGAAGCTA+AGG + chr8_2:15354597-15354616 Msa1236420:CDS 25.0%
! TAAATGATTAAACAAACCTG+TGG - chr8_2:15354999-15355018 None:intergenic 25.0%
! ATCTACATTAGTTGAATCAT+TGG + chr8_2:15355018-15355037 Msa1236420:intron 25.0%
! AAGATATGAATGCAACATAA+AGG + chr8_2:15355076-15355095 Msa1236420:intron 25.0%
! AGATGATGTAAAGATGATTA+TGG + chr8_2:15355212-15355231 Msa1236420:CDS 25.0%
! TTGCAAACATCAGTATAAAT+AGG + chr8_2:15355761-15355780 Msa1236420:intron 25.0%
!! TAAATTAGTTTCTTGTGAAG+TGG - chr8_2:15355933-15355952 None:intergenic 25.0%
!!! TATAAAGTTGTTTTCATGCT+TGG + chr8_2:15356220-15356239 Msa1236420:CDS 25.0%
! AAATTGATCAGATAACTCAA+TGG + chr8_2:15356378-15356397 Msa1236420:CDS 25.0%
!! GCTTTATTAACATTGATTGA+AGG + chr8_2:15356854-15356873 Msa1236420:CDS 25.0%
!!! TTTTAAGGAAGAAAAAATGC+TGG + chr8_2:15357148-15357167 Msa1236420:exon 25.0%
!!! CATGCATTGATTTTTTTCTT+TGG + chr8_2:15357517-15357536 Msa1236420:three_prime_UTR 25.0%
AAGCAAAGAAGAGTTCAATT+TGG - chr8_2:15352718-15352737 None:intergenic 30.0%
CTTCATTCACTTCTTCAAAA+TGG + chr8_2:15352735-15352754 Msa1236420:five_prime_UTR 30.0%
! CAAAGTTTCTTTTGCTCAAA+AGG + chr8_2:15352815-15352834 Msa1236420:five_prime_UTR 30.0%
TATTCAGAGAAAGCAAACAA+GGG - chr8_2:15352908-15352927 None:intergenic 30.0%
ATATTCAGAGAAAGCAAACA+AGG - chr8_2:15352909-15352928 None:intergenic 30.0%
TATCAGATTTAGACCTTGTT+TGG + chr8_2:15353150-15353169 Msa1236420:five_prime_UTR 30.0%
ATAAGCTGTTTATCCAAACA+AGG - chr8_2:15353166-15353185 None:intergenic 30.0%
AGAAACATTCATTGAACAGA+AGG + chr8_2:15353257-15353276 Msa1236420:five_prime_UTR 30.0%
GAAACATTCATTGAACAGAA+GGG + chr8_2:15353258-15353277 Msa1236420:five_prime_UTR 30.0%
ACTAACAAATGTTGCCAAAA+GGG - chr8_2:15353308-15353327 None:intergenic 30.0%
! ATTGATTCATGGGAACAAAA+AGG + chr8_2:15353331-15353350 Msa1236420:five_prime_UTR 30.0%
GATTCATAATATCAATGGCA+CGG - chr8_2:15353598-15353617 None:intergenic 30.0%
TTCGCGATTCATAATATCAA+TGG - chr8_2:15353603-15353622 None:intergenic 30.0%
ATTGTAGGTCGATTGTAAAT+CGG + chr8_2:15353687-15353706 Msa1236420:CDS 30.0%
!! ATTTTAGAGAAAATCGAGTC+AGG + chr8_2:15353860-15353879 Msa1236420:CDS 30.0%
!! TTTTAGAGAAAATCGAGTCA+GGG + chr8_2:15353861-15353880 Msa1236420:CDS 30.0%
TATTTCAGTTTCCTTTCGTT+CGG - chr8_2:15354103-15354122 None:intergenic 30.0%
AACTGAAATACTTTGCGAAA+CGG + chr8_2:15354113-15354132 Msa1236420:CDS 30.0%
! GTTGATTCCTTTAGATACAT+CGG + chr8_2:15354297-15354316 Msa1236420:CDS 30.0%
TGAAACAATCCATAGAAGAA+TGG + chr8_2:15354341-15354360 Msa1236420:CDS 30.0%
TCTATCTTTCCATTCTTCTA+TGG - chr8_2:15354353-15354372 None:intergenic 30.0%
AAGTTGTCTAAAAACTCTCA+AGG + chr8_2:15354441-15354460 Msa1236420:CDS 30.0%
! TATCTTTTGCTAGAATGCAA+AGG - chr8_2:15354585-15354604 None:intergenic 30.0%
! AACTAAACTTTCTTTTCTGC+AGG + chr8_2:15354676-15354695 Msa1236420:intron 30.0%
TAAAGATGCAACTGAAGTAT+TGG + chr8_2:15354895-15354914 Msa1236420:CDS 30.0%
TGATCAGAATGTTATACTGA+TGG + chr8_2:15354934-15354953 Msa1236420:CDS 30.0%
AATGAGATAGAAACAGCTTA+TGG - chr8_2:15355178-15355197 None:intergenic 30.0%
! AATAAGGAGTCCTTATTTGA+CGG + chr8_2:15355270-15355289 Msa1236420:CDS 30.0%
GTTCTTACATAATGATCTTC+AGG + chr8_2:15355320-15355339 Msa1236420:CDS 30.0%
CTATCCAGTTTAAACAGAAA+TGG + chr8_2:15355375-15355394 Msa1236420:CDS 30.0%
AAGTCCATTTCTGTTTAAAC+TGG - chr8_2:15355382-15355401 None:intergenic 30.0%
CATACACACATCAAGTTTAT+GGG + chr8_2:15355458-15355477 Msa1236420:CDS 30.0%
TCAGAATCTAGTAACAAAAC+CGG - chr8_2:15355546-15355565 None:intergenic 30.0%
TTGCCAATTCGAAAAAATGA+GGG - chr8_2:15355787-15355806 None:intergenic 30.0%
TTTGCCAATTCGAAAAAATG+AGG - chr8_2:15355788-15355807 None:intergenic 30.0%
GATTGAAACTTTACGATCTT+TGG + chr8_2:15356005-15356024 Msa1236420:intron 30.0%
ATCAACATTCTCTACTATGA+TGG - chr8_2:15356264-15356283 None:intergenic 30.0%
TGAGTTATCTGATCAATTTC+TGG - chr8_2:15356377-15356396 None:intergenic 30.0%
CAAAAAATTGTAGCTGAAAC+TGG + chr8_2:15356539-15356558 Msa1236420:CDS 30.0%
! CAAGTCATCATTTTGTCTTT+TGG + chr8_2:15356757-15356776 Msa1236420:CDS 30.0%
AATCTTGGAGAATCTGATTA+TGG + chr8_2:15356809-15356828 Msa1236420:CDS 30.0%
! GATCAGTCTTCATACTTTTA+AGG + chr8_2:15357133-15357152 Msa1236420:CDS 30.0%
TAGGTTAAAACACCAAAAGA+AGG - chr8_2:15357219-15357238 None:intergenic 30.0%
CTATTTCCTCAGATTATTAC+TGG + chr8_2:15357319-15357338 Msa1236420:three_prime_UTR 30.0%
AAAAATCAATGCATGTCCAA+TGG - chr8_2:15357512-15357531 None:intergenic 30.0%
! AGCAATTTGAGGTAATTAAC+AGG - chr8_2:15357544-15357563 None:intergenic 30.0%
TCAAATGTACAAGCAATTTG+AGG - chr8_2:15357555-15357574 None:intergenic 30.0%
GAAGAGTTCAATTTGGAAAG+TGG - chr8_2:15352711-15352730 None:intergenic 35.0%
CAAAAGGGTTCTCAAATTCA+TGG + chr8_2:15352831-15352850 Msa1236420:five_prime_UTR 35.0%
TCTCTCTTTAAGTCTTTCTC+AGG + chr8_2:15352860-15352879 Msa1236420:five_prime_UTR 35.0%
AGAAGAAAATAGGTGCAAGT+TGG - chr8_2:15352946-15352965 None:intergenic 35.0%
ATTCATTGAACAGAAGGGTT+TGG + chr8_2:15353263-15353282 Msa1236420:five_prime_UTR 35.0%
! TATGCAAATTGCAACCCTTT+TGG + chr8_2:15353291-15353310 Msa1236420:five_prime_UTR 35.0%
CACTAACAAATGTTGCCAAA+AGG - chr8_2:15353309-15353328 None:intergenic 35.0%
ATTGCTGCATTGTAAGATGA+TGG + chr8_2:15353373-15353392 Msa1236420:exon 35.0%
! GTTGCAGATTTTCTTAGTTC+TGG + chr8_2:15353395-15353414 Msa1236420:CDS 35.0%
GATTTGAGAAATTGCAGTTG+AGG - chr8_2:15353426-15353445 None:intergenic 35.0%
TGAAAAAGTGAGTGATTCTG+AGG + chr8_2:15353565-15353584 Msa1236420:CDS 35.0%
TGTGATAATATGGAGAAAGC+TGG + chr8_2:15353809-15353828 Msa1236420:CDS 35.0%
TATGGAGAAAGCTGGATTTA+AGG + chr8_2:15353817-15353836 Msa1236420:CDS 35.0%
! TGCTCGTGTTGATAAGAAAA+AGG + chr8_2:15354015-15354034 Msa1236420:CDS 35.0%
GGATCAAATCATTGCTTTGT+TGG + chr8_2:15354054-15354073 Msa1236420:CDS 35.0%
ATCTTTAGGTACTCGAATCT+TGG + chr8_2:15354138-15354157 Msa1236420:CDS 35.0%
GGACAATAAAATGACTGTAG+AGG - chr8_2:15354166-15354185 None:intergenic 35.0%
TCCTATCACACATGATGTTA+TGG + chr8_2:15354183-15354202 Msa1236420:CDS 35.0%
ACCATAACATCATGTGTGAT+AGG - chr8_2:15354187-15354206 None:intergenic 35.0%
TATCACACATGATGTTATGG+TGG + chr8_2:15354186-15354205 Msa1236420:CDS 35.0%
TGATCTGATGAAGTTTCAAC+AGG - chr8_2:15354214-15354233 None:intergenic 35.0%
ATAGAGAAGTGGTTTGAAGA+AGG + chr8_2:15354253-15354272 Msa1236420:CDS 35.0%
TCTAAAGGAATCAACGTCAA+AGG - chr8_2:15354292-15354311 None:intergenic 35.0%
CTCAAAACCGATGTATCTAA+AGG - chr8_2:15354307-15354326 None:intergenic 35.0%
GAGCATGATTCCTTATATCA+CGG - chr8_2:15354555-15354574 None:intergenic 35.0%
GAACACATTGGAAAAGTTCA+AGG + chr8_2:15354821-15354840 Msa1236420:CDS 35.0%
TCAAGGTTGCATACTTCTAT+TGG + chr8_2:15354838-15354857 Msa1236420:CDS 35.0%
! CTATTGGTGACTATGTCTAA+TGG + chr8_2:15354854-15354873 Msa1236420:CDS 35.0%
GAATGTTATACTGATGGCAA+AGG + chr8_2:15354940-15354959 Msa1236420:CDS 35.0%
ATAGAAACAGCTTATGGTTC+TGG - chr8_2:15355172-15355191 None:intergenic 35.0%
TTCTATCTCATTATCTGTGC+AGG + chr8_2:15355186-15355205 Msa1236420:intron 35.0%
TTCCATTTCGGCTAATGTAT+TGG - chr8_2:15355238-15355257 None:intergenic 35.0%
GTGGTCAGTTAATTCCATTT+CGG - chr8_2:15355250-15355269 None:intergenic 35.0%
GGAATTAACTGACCACAATA+AGG + chr8_2:15355254-15355273 Msa1236420:CDS 35.0%
CAAATAAGGACTCCTTATTG+TGG - chr8_2:15355269-15355288 None:intergenic 35.0%
TGTAAGAACAAGTGAAGAAG+AGG - chr8_2:15355309-15355328 None:intergenic 35.0%
TAGATTCTTAAGAGCCTTTG+TGG - chr8_2:15355358-15355377 None:intergenic 35.0%
GACTTGAAATGATTCGACAA+GGG + chr8_2:15355397-15355416 Msa1236420:CDS 35.0%
ACTTGAAATGATTCGACAAG+GGG + chr8_2:15355398-15355417 Msa1236420:CDS 35.0%
TGTGTATGCTATGATGGTAA+AGG - chr8_2:15355446-15355465 None:intergenic 35.0%
TTGATGTGTGTATGCTATGA+TGG - chr8_2:15355452-15355471 None:intergenic 35.0%
GCATACACACATCAAGTTTA+TGG + chr8_2:15355457-15355476 Msa1236420:CDS 35.0%
TGCAGCAAGTTGCATAATTA+TGG - chr8_2:15355496-15355515 None:intergenic 35.0%
! TCACACTGATTAAAGGGAAA+AGG - chr8_2:15355584-15355603 None:intergenic 35.0%
! GTTGTGTCACACTGATTAAA+GGG - chr8_2:15355590-15355609 None:intergenic 35.0%
!! ATAATGTTTTGTTGCACACC+AGG - chr8_2:15355612-15355631 None:intergenic 35.0%
GTCTTGATATTTGAAGACGA+AGG - chr8_2:15355663-15355682 None:intergenic 35.0%
TATCAAGACGAAGCTAAATG+AGG + chr8_2:15355674-15355693 Msa1236420:CDS 35.0%
TAACGACAGAAGTTAACAGA+TGG - chr8_2:15355848-15355867 None:intergenic 35.0%
ATGTGAGATTAATGCGCAAT+TGG - chr8_2:15355904-15355923 None:intergenic 35.0%
ACTTTATAGCACTTGCTCTT+AGG - chr8_2:15356208-15356227 None:intergenic 35.0%
TATTTCCTCTTCATCAGATG+AGG - chr8_2:15356324-15356343 None:intergenic 35.0%
AGAGGAAATACATTCTGCTA+TGG + chr8_2:15356334-15356353 Msa1236420:CDS 35.0%
GAGGAAATACATTCTGCTAT+GGG + chr8_2:15356335-15356354 Msa1236420:CDS 35.0%
! TCTGATCAATTTCTGGAAGA+TGG - chr8_2:15356370-15356389 None:intergenic 35.0%
! AGTTACTCCTTTGAAGATCT+CGG - chr8_2:15356460-15356479 None:intergenic 35.0%
! TTTTACAGTTCCAACACACT+TGG + chr8_2:15356511-15356530 Msa1236420:CDS 35.0%
TTAGTGCAGTTGCTTGAAAT+TGG + chr8_2:15356575-15356594 Msa1236420:CDS 35.0%
!! CGCTGAATTTTCTAAAAGCT+CGG + chr8_2:15356634-15356653 Msa1236420:CDS 35.0%
! CATAGTAGTCCTTTTTGCTT+CGG - chr8_2:15356680-15356699 None:intergenic 35.0%
GAAATTGGCTGTAAAGTTCA+TGG + chr8_2:15356719-15356738 Msa1236420:CDS 35.0%
!! TTTCTTAGTTCTACCTCTCT+TGG + chr8_2:15356941-15356960 Msa1236420:CDS 35.0%
!! TTCTTAGTTCTACCTCTCTT+GGG + chr8_2:15356942-15356961 Msa1236420:CDS 35.0%
!! AGTCTCTACATGCTTTAGAA+AGG + chr8_2:15356975-15356994 Msa1236420:CDS 35.0%
AGTTTCAGTGCTACATACAT+AGG - chr8_2:15357238-15357257 None:intergenic 35.0%
GCACTGAAACTTCATATTCA+AGG + chr8_2:15357247-15357266 Msa1236420:three_prime_UTR 35.0%
ATAGCACCAGTAATAATCTG+AGG - chr8_2:15357328-15357347 None:intergenic 35.0%
!! TTATTACTGGTGCTATGTGT+TGG + chr8_2:15357332-15357351 Msa1236420:three_prime_UTR 35.0%
!! ACATTTTGGTCACAAGATTG+AGG - chr8_2:15357407-15357426 None:intergenic 35.0%
TATAAAGATAGGAGCTCCAT+TGG + chr8_2:15357493-15357512 Msa1236420:three_prime_UTR 35.0%
ACTGTGGTGCTTAAGAAAAA+AGG + chr8_2:15357615-15357634 Msa1236420:three_prime_UTR 35.0%
TGAGAAATTGCAGTTGAGGT+AGG - chr8_2:15353422-15353441 None:intergenic 40.0%
GTACATCATTAGCACTGCAT+AGG - chr8_2:15353469-15353488 None:intergenic 40.0%
!!! CGCCGATTTTGAAAGAATTG+AGG + chr8_2:15353540-15353559 Msa1236420:CDS 40.0%
AGAAAATCGAGTCAGGGATA+AGG + chr8_2:15353867-15353886 Msa1236420:CDS 40.0%
GAAAATCGAGTCAGGGATAA+GGG + chr8_2:15353868-15353887 Msa1236420:CDS 40.0%
AATCTCATTGCTAACGCTGT+TGG + chr8_2:15353929-15353948 Msa1236420:CDS 40.0%
AAATGAGAAGTCGACGATGA+AGG + chr8_2:15353958-15353977 Msa1236420:CDS 40.0%
AAAGGCTGAAGCTATGCAAA+TGG + chr8_2:15354033-15354052 Msa1236420:CDS 40.0%
TTTGCGAAACGGCAATCTTT+AGG + chr8_2:15354124-15354143 Msa1236420:CDS 40.0%
! AGAGAAGTGCAATAGAGAAG+TGG + chr8_2:15354242-15354261 Msa1236420:CDS 40.0%
GTTCGAGAAACCGTGATATA+AGG + chr8_2:15354542-15354561 Msa1236420:CDS 40.0%
GAATCGATAGTCCATTCTCT+TGG + chr8_2:15354728-15354747 Msa1236420:CDS 40.0%
TTCTCGCGCCAAATCATATT+TGG - chr8_2:15354804-15354823 None:intergenic 40.0%
AAGTACACCACCGTCAAATA+AGG - chr8_2:15355283-15355302 None:intergenic 40.0%
TGATCTTCAGGTGAAAACAG+TGG + chr8_2:15355332-15355351 Msa1236420:CDS 40.0%
GGACTTGAAATGATTCGACA+AGG + chr8_2:15355396-15355415 Msa1236420:CDS 40.0%
! GGTTGTGTCACACTGATTAA+AGG - chr8_2:15355591-15355610 None:intergenic 40.0%
TTAATCAGTGTGACACAACC+TGG + chr8_2:15355591-15355610 Msa1236420:CDS 40.0%
!!! AGGCCCTCATTTTTTCGAAT+TGG + chr8_2:15355781-15355800 Msa1236420:intron 40.0%
CTGTTAACTTCTGTCGTTAG+AGG + chr8_2:15355849-15355868 Msa1236420:intron 40.0%
CTATGATGTGGCACGTTAAT+TGG + chr8_2:15355872-15355891 Msa1236420:intron 40.0%
GATTAATGCGCAATTGGACA+TGG - chr8_2:15355898-15355917 None:intergenic 40.0%
! TGAGCACTGTTCATACATAG+GGG - chr8_2:15356141-15356160 None:intergenic 40.0%
! CTGAGCACTGTTCATACATA+GGG - chr8_2:15356142-15356161 None:intergenic 40.0%
CAGCTATACCAGAATTGGTT+AGG + chr8_2:15356159-15356178 Msa1236420:CDS 40.0%
TCACACAACCTAACCAATTC+TGG - chr8_2:15356170-15356189 None:intergenic 40.0%
CTTCATCAGATGAGGATTGT+AGG - chr8_2:15356316-15356335 None:intergenic 40.0%
ACAATCCTCATCTGATGAAG+AGG + chr8_2:15356316-15356335 Msa1236420:CDS 40.0%
! ACTCAATGGATTCTAGATGC+TGG + chr8_2:15356392-15356411 Msa1236420:CDS 40.0%
AACTTAGTCGAGAAAGCAGT+TGG + chr8_2:15356476-15356495 Msa1236420:CDS 40.0%
TGGAACTGTAAAACGACGTA+AGG - chr8_2:15356504-15356523 None:intergenic 40.0%
! AGTCCTTTTTGCTTCGGAAT+CGG - chr8_2:15356674-15356693 None:intergenic 40.0%
ACTTTACAGCCAATTTCGCT+CGG - chr8_2:15356716-15356735 None:intergenic 40.0%
ATTGGCTGTAAAGTTCATGG+AGG + chr8_2:15356722-15356741 Msa1236420:CDS 40.0%
TTGGCTGTAAAGTTCATGGA+GGG + chr8_2:15356723-15356742 Msa1236420:CDS 40.0%
TCTCCAAGATTTCTTGTGAG+TGG - chr8_2:15356800-15356819 None:intergenic 40.0%
ATCTGATTATGGAGTCTGTG+AGG + chr8_2:15356820-15356839 Msa1236420:CDS 40.0%
GCAGAGTTCAAACAGTTGTA+TGG + chr8_2:15357010-15357029 Msa1236420:CDS 40.0%
CTCTGAGTTAAGTCAACTAG+AGG - chr8_2:15357052-15357071 None:intergenic 40.0%
! CTCTAGTTGACTTAACTCAG+AGG + chr8_2:15357050-15357069 Msa1236420:CDS 40.0%
GACTTAACTCAGAGGAGTAA+TGG + chr8_2:15357058-15357077 Msa1236420:CDS 40.0%
! ATCCATGTCAGCAAGAGTAT+TGG + chr8_2:15357090-15357109 Msa1236420:CDS 40.0%
!! TAGCTTAGCTTGCATAGCAA+AGG - chr8_2:15357182-15357201 None:intergenic 40.0%
CAAAAGAAGGCTATTCCACA+TGG - chr8_2:15357206-15357225 None:intergenic 40.0%
! CATGTGGAATAGCCTTCTTT+TGG + chr8_2:15357204-15357223 Msa1236420:three_prime_UTR 40.0%
CACAAGTGTGAAGGTCATAT+CGG - chr8_2:15357284-15357303 None:intergenic 40.0%
TTGTGTAGTCACAAGTGTGA+AGG - chr8_2:15357293-15357312 None:intergenic 40.0%
GAGGAACATCATATCAAGTG+TGG - chr8_2:15357388-15357407 None:intergenic 40.0%
TACGACATTCCAGAGCAAGT+AGG - chr8_2:15353640-15353659 None:intergenic 45.0%
GGAATGTCGTAAGAAGAGCA+AGG + chr8_2:15353649-15353668 Msa1236420:CDS 45.0%
TCGGTTAGAAAGTCACACGA+AGG + chr8_2:15353706-15353725 Msa1236420:CDS 45.0%
TCACACGAAGGAGATAAGCA+AGG + chr8_2:15353718-15353737 Msa1236420:CDS 45.0%
AGGTCTTTCAGCCGGAATAT+TGG + chr8_2:15353769-15353788 Msa1236420:CDS 45.0%
! GAAAGCTGGATTTAAGGCTG+CGG + chr8_2:15353823-15353842 Msa1236420:CDS 45.0%
! TTTCCTTTCGTTCGGTGATG+AGG - chr8_2:15354095-15354114 None:intergenic 45.0%
CAGGGAATGGATGATACTTG+AGG + chr8_2:15354489-15354508 Msa1236420:CDS 45.0%
GGCCAATACATTAGCCGAAA+TGG + chr8_2:15355233-15355252 Msa1236420:CDS 45.0%
! AAGGAGTCCTTATTTGACGG+TGG + chr8_2:15355273-15355292 Msa1236420:CDS 45.0%
TGGTAAAGGAGATCGAGCAA+CGG - chr8_2:15355432-15355451 None:intergenic 45.0%
CTCTCAAGATATCCAAACGC+CGG + chr8_2:15355524-15355543 Msa1236420:CDS 45.0%
CTAGTAACAAAACCGGCGTT+TGG - chr8_2:15355539-15355558 None:intergenic 45.0%
TGACTGACACAAGGCGTAAA+AGG - chr8_2:15355640-15355659 None:intergenic 45.0%
TGTCGTTAGAGGCTATGATG+TGG + chr8_2:15355860-15355879 Msa1236420:intron 45.0%
! GAGCACTGTTCATACATAGG+GGG - chr8_2:15356140-15356159 None:intergenic 45.0%
! GCTGAGCACTGTTCATACAT+AGG - chr8_2:15356143-15356162 None:intergenic 45.0%
GTGCTCAGCTATACCAGAAT+TGG + chr8_2:15356154-15356173 Msa1236420:intron 45.0%
GTAGAGACCGAGATCTTCAA+AGG + chr8_2:15356450-15356469 Msa1236420:CDS 45.0%
! TTTTGCCACTCCAAGTGTGT+TGG - chr8_2:15356524-15356543 None:intergenic 45.0%
! AGACCGATTCCGAAGCAAAA+AGG + chr8_2:15356668-15356687 Msa1236420:CDS 45.0%
TGGCTGTAAAGTTCATGGAG+GGG + chr8_2:15356724-15356743 Msa1236420:CDS 45.0%
! CTTTTGGCAGCTGAAGCAAT+TGG + chr8_2:15356773-15356792 Msa1236420:CDS 45.0%
GGACCACTCACAAGAAATCT+TGG + chr8_2:15356794-15356813 Msa1236420:CDS 45.0%
GAAGGTGAAAGACTAGAGAG+TGG + chr8_2:15356872-15356891 Msa1236420:CDS 45.0%
! CTTTTCTTGCAACCCAAGAG+AGG - chr8_2:15356957-15356976 None:intergenic 45.0%
!! AACTAGAGGCATTTGAGCTG+AGG - chr8_2:15357038-15357057 None:intergenic 45.0%
TGCCAATACTCTTGCTGACA+TGG - chr8_2:15357095-15357114 None:intergenic 45.0%
TGCAAGCTAAGCTAACCATG+TGG + chr8_2:15357188-15357207 Msa1236420:three_prime_UTR 45.0%
! TGTGTTGGTGTGGTCATATC+TGG + chr8_2:15357347-15357366 Msa1236420:three_prime_UTR 45.0%
ATCAAGTGTGGAACCAGACA+CGG - chr8_2:15357376-15357395 None:intergenic 45.0%
! CGCGGAGTCTCAAAACATTT+TGG - chr8_2:15357421-15357440 None:intergenic 45.0%
TCATGAGAGCAAGCCAAATG+CGG - chr8_2:15357447-15357466 None:intergenic 45.0%
AGCTGCAAACCTACTTGCTC+TGG + chr8_2:15353628-15353647 Msa1236420:CDS 50.0%
! AAGGAGATAAGCAAGGCGCT+CGG + chr8_2:15353725-15353744 Msa1236420:CDS 50.0%
CTTCTTCCTTTAGCCGCATC+AGG + chr8_2:15353749-15353768 Msa1236420:CDS 50.0%
GAAAGACCTGATGCGGCTAA+AGG - chr8_2:15353758-15353777 None:intergenic 50.0%
! TGGATTTAAGGCTGCGGTAG+CGG + chr8_2:15353829-15353848 Msa1236420:CDS 50.0%
AGAGAGAGCAACACAGGGAA+TGG + chr8_2:15354476-15354495 Msa1236420:CDS 50.0%
GATTTGGCGCGAGAACACAT+TGG + chr8_2:15354809-15354828 Msa1236420:CDS 50.0%
TTACTGCAACGTCTCTCCAC+AGG + chr8_2:15354980-15354999 Msa1236420:CDS 50.0%
GGTGAAAACAGTGGCCACAA+AGG + chr8_2:15355341-15355360 Msa1236420:CDS 50.0%
AGACGAAGGTGACTGACACA+AGG - chr8_2:15355649-15355668 None:intergenic 50.0%
CAGTTCCAACACACTTGGAG+TGG + chr8_2:15356516-15356535 Msa1236420:CDS 50.0%
!! CGCTGCACGTTGTTTTGTCA+AGG - chr8_2:15356606-15356625 None:intergenic 50.0%
TTCTCAGCTCCGAGCGAAAT+TGG + chr8_2:15356704-15356723 Msa1236420:CDS 50.0%
TGGAGTCTGTGAGGCTTCTT+TGG + chr8_2:15356829-15356848 Msa1236420:CDS 50.0%
GGTGAAAGACTAGAGAGTGG+TGG + chr8_2:15356875-15356894 Msa1236420:CDS 50.0%
!! ACTGGTGCTATGTGTTGGTG+TGG + chr8_2:15357337-15357356 Msa1236420:three_prime_UTR 50.0%
TCATATCTGGTGTCCGTGTC+TGG + chr8_2:15357360-15357379 Msa1236420:three_prime_UTR 50.0%
TCCGGCTGAAAGACCTGATG+CGG - chr8_2:15353765-15353784 None:intergenic 55.0%
CAGCCTCATCACCGAACGAA+AGG + chr8_2:15354089-15354108 Msa1236420:CDS 55.0%
CGAGCAGAGAGAGCAACACA+GGG + chr8_2:15354471-15354490 Msa1236420:CDS 55.0%
CCTGACGTCGTCCAAGAGAA+TGG - chr8_2:15354742-15354761 None:intergenic 55.0%
CCATTCTCTTGGACGACGTC+AGG + chr8_2:15354739-15354758 Msa1236420:CDS 55.0%
TTCTCTTGGACGACGTCAGG+AGG + chr8_2:15354742-15354761 Msa1236420:CDS 55.0%
TTGGACGACGTCAGGAGGAA+AGG + chr8_2:15354747-15354766 Msa1236420:CDS 55.0%
AGACTCCGCGTTTCCGCATT+TGG + chr8_2:15357431-15357450 Msa1236420:three_prime_UTR 55.0%
GCAAGCCAAATGCGGAAACG+CGG - chr8_2:15357439-15357458 None:intergenic 55.0%
GCCGCATCAGGTCTTTCAGC+CGG + chr8_2:15353761-15353780 Msa1236420:CDS 60.0%
GCGAGCAGAGAGAGCAACAC+AGG + chr8_2:15354470-15354489 Msa1236420:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 15352700 15357640 15352700 ID=Msa1236420;Name=Msa1236420
chr8_2 mRNA 15352700 15357640 15352700 ID=Msa1236420-mRNA-1;Parent=Msa1236420;Name=Msa1236420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=632|1|1|1|0.75|0.6|5|487|1006
chr8_2 exon 15352700 15353021 15352700 ID=Msa1236420-mRNA-1:exon:5787;Parent=Msa1236420-mRNA-1
chr8_2 exon 15353079 15354618 15353079 ID=Msa1236420-mRNA-1:exon:5788;Parent=Msa1236420-mRNA-1
chr8_2 exon 15354698 15355001 15354698 ID=Msa1236420-mRNA-1:exon:5789;Parent=Msa1236420-mRNA-1
chr8_2 exon 15355208 15355695 15355208 ID=Msa1236420-mRNA-1:exon:5790;Parent=Msa1236420-mRNA-1
chr8_2 exon 15356155 15357640 15356155 ID=Msa1236420-mRNA-1:exon:5791;Parent=Msa1236420-mRNA-1
chr8_2 five_prime_UTR 15352700 15353021 15352700 ID=Msa1236420-mRNA-1:five_prime_utr;Parent=Msa1236420-mRNA-1
chr8_2 five_prime_UTR 15353079 15353388 15353079 ID=Msa1236420-mRNA-1:five_prime_utr;Parent=Msa1236420-mRNA-1
chr8_2 CDS 15353389 15354618 15353389 ID=Msa1236420-mRNA-1:cds;Parent=Msa1236420-mRNA-1
chr8_2 CDS 15354698 15355001 15354698 ID=Msa1236420-mRNA-1:cds;Parent=Msa1236420-mRNA-1
chr8_2 CDS 15355208 15355695 15355208 ID=Msa1236420-mRNA-1:cds;Parent=Msa1236420-mRNA-1
chr8_2 CDS 15356155 15357153 15356155 ID=Msa1236420-mRNA-1:cds;Parent=Msa1236420-mRNA-1
chr8_2 three_prime_UTR 15357154 15357640 15357154 ID=Msa1236420-mRNA-1:three_prime_utr;Parent=Msa1236420-mRNA-1
Gene Sequence

>Msa1236420

ATGATGGTTGCAGATTTTCTTAGTTCTGGTCCTACCTCAACTGCAATTTCTCAAATCATAGAAACTATTGGTGAGTTCCTATGCAGTGCTAATGATGTACTTGTGAATAAAGATAGTTTTAAGGAACTTAGTTCTTATTTGGAAAGAATTACGCCGATTTTGAAAGAATTGAGGAATGAAAAAGTGAGTGATTCTGAGGCATTCAACCGTGCCATTGATATTATGAATCGCGAAACGAAAGCTGCAAACCTACTTGCTCTGGAATGTCGTAAGAAGAGCAAGGTTTATTTGTTAATGAATTGTAGGTCGATTGTAAATCGGTTAGAAAGTCACACGAAGGAGATAAGCAAGGCGCTCGGTCTTCTTCCTTTAGCCGCATCAGGTCTTTCAGCCGGAATATTGGAAGAAATTAAAAAGGTTTGTGATAATATGGAGAAAGCTGGATTTAAGGCTGCGGTAGCGGAAGAAGAGATTTTAGAGAAAATCGAGTCAGGGATAAGGGAAAACAGTTTTGATCGTAAGCATGCAAATAATTTAATAAATCTCATTGCTAACGCTGTTGGAATTACAAATGAGAAGTCGACGATGAAGGCTGAACTTGAAGAGTTTAAAAAAGAAATCGAAAATGCTCGTGTTGATAAGAAAAAGGCTGAAGCTATGCAAATGGATCAAATCATTGCTTTGTTGGAAAGAGCTGATGCAGCCTCATCACCGAACGAAAGGAAACTGAAATACTTTGCGAAACGGCAATCTTTAGGTACTCGAATCTTGGAGCCTCTACAGTCATTTTATTGTCCTATCACACATGATGTTATGGTGGAACCTGTTGAAACTTCATCAGATCAAACATTTGAGAGAAGTGCAATAGAGAAGTGGTTTGAAGAAGGAAACAAGTTGTGTCCTTTGACGTTGATTCCTTTAGATACATCGGTTTTGAGACCTAACAAAACTTTGAAACAATCCATAGAAGAATGGAAAGATAGAAATACAATGATTACAATTGCTACTTTGAAAGAAAAAATACATCAGTTTGGAGATGATGATGAAGTGATAAGTTGTCTAAAAACTCTCAAGGATTTGTGCGAGCAGAGAGAGCAACACAGGGAATGGATGATACTTGAGGACTACATACAAGTTCTTATACAAATTCTTGGTTCGAGAAACCGTGATATAAGGAATCATGCTCTTGTCATCCTTTGCATTCTAGCAAAAGATAATGAAGAAGCTAAGGAAAGAATTGTAACAGTTGATAATGCGATTGAATCGATAGTCCATTCTCTTGGACGACGTCAGGAGGAAAGGAAGTTAGCAGTTGCATTACTGCTTGAATTATCCAAATATGATTTGGCGCGAGAACACATTGGAAAAGTTCAAGGTTGCATACTTCTATTGGTGACTATGTCTAATGGTGATGACAATCAAGCTGCTAAAGATGCAACTGAAGTATTGGATAATCTTTCATACTCTGATCAGAATGTTATACTGATGGCAAAGGCAAACTATTTCAAGCATTTACTGCAACGTCTCTCCACAGGAGCAGATGATGTAAAGATGATTATGGCCAATACATTAGCCGAAATGGAATTAACTGACCACAATAAGGAGTCCTTATTTGACGGTGGTGTACTTGCTCCTCTTCTTCACTTGTTCTTACATAATGATCTTCAGGTGAAAACAGTGGCCACAAAGGCTCTTAAGAATCTATCCAGTTTAAACAGAAATGGACTTGAAATGATTCGACAAGGGGCAGTGCGACCGTTGCTCGATCTCCTTTACCATCATAGCATACACACATCAAGTTTATGGGAAGATGTAGCAGCCATAATTATGCAACTTGCTGCATCAACTATCTCTCAAGATATCCAAACGCCGGTTTTGTTACTAGATTCTGATGATGATGTTTTTAACCTTTTCCCTTTAATCAGTGTGACACAACCTGGTGTGCAACAAAACATTATTCAGACCTTTTACGCCTTGTGTCAGTCACCTTCGTCTTCAAATATCAAGACGAAGCTAAATGAGTGCTCAGCTATACCAGAATTGGTTAGGTTGTGTGAGAATGAGAATCTAAACCTAAGAGCAAGTGCTATAAAGTTGTTTTCATGCTTGGTAGAGAGTTGTGATGAATCCATCATAGTAGAGAATGTTGATCAGAAATGCATCAATACTTTACTTCAGATCCTACAATCCTCATCTGATGAAGAGGAAATACATTCTGCTATGGGAATAATATGCCATCTTCCAGAAATTGATCAGATAACTCAATGGATTCTAGATGCTGGCGTACTTCCAATCATGTATAAATATGTTCAAGACGGTAGAGACCGAGATCTTCAAAGGAGTAACTTAGTCGAGAAAGCAGTTGGTGCCTTACGTCGTTTTACAGTTCCAACACACTTGGAGTGGCAAAAAATTGTAGCTGAAACTGGTATTATAACTGTTTTAGTGCAGTTGCTTGAAATTGGATCAACCTTGACAAAACAACGTGCAGCGTTATGTCTCGCTGAATTTTCTAAAAGCTCGGTTAGTCTCAGCAGACCGATTCCGAAGCAAAAAGGACTACTATGTTGTTTCTCAGCTCCGAGCGAAATTGGCTGTAAAGTTCATGGAGGGGTATGCACTGTCAAGTCATCATTTTGTCTTTTGGCAGCTGAAGCAATTGGACCACTCACAAGAAATCTTGGAGAATCTGATTATGGAGTCTGTGAGGCTTCTTTGGATGCTTTATTAACATTGATTGAAGGTGAAAGACTAGAGAGTGGTGGTAAAGTGCTTGCTAAAGCAAATGCAATACCATTAATAATAAAATTTCTTAGTTCTACCTCTCTTGGGTTGCAAGAAAAGTCTCTACATGCTTTAGAAAGGATTTTTCAGCTAGCAGAGTTCAAACAGTTGTATGGAGCCTCAGCTCAAATGCCTCTAGTTGACTTAACTCAGAGGAGTAATGGTAGAGTTAGATCCATGTCAGCAAGAGTATTGGCACATTTGAATGTTCTTCATGATCAGTCTTCATACTTTTAA
Protein sequence

>Msa1236420

MMVADFLSSGPTSTAISQIIETIGEFLCSANDVLVNKDSFKELSSYLERITPILKELRNEKVSDSEAFNRAIDIMNRETKAANLLALECRKKSKVYLLMNCRSIVNRLESHTKEISKALGLLPLAASGLSAGILEEIKKVCDNMEKAGFKAAVAEEEILEKIESGIRENSFDRKHANNLINLIANAVGITNEKSTMKAELEEFKKEIENARVDKKKAEAMQMDQIIALLERADAASSPNERKLKYFAKRQSLGTRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFEEGNKLCPLTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIHQFGDDDEVISCLKTLKDLCEQREQHREWMILEDYIQVLIQILGSRNRDIRNHALVILCILAKDNEEAKERIVTVDNAIESIVHSLGRRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAAKDATEVLDNLSYSDQNVILMAKANYFKHLLQRLSTGADDVKMIMANTLAEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALKNLSSLNRNGLEMIRQGAVRPLLDLLYHHSIHTSSLWEDVAAIIMQLAASTISQDIQTPVLLLDSDDDVFNLFPLISVTQPGVQQNIIQTFYALCQSPSSSNIKTKLNECSAIPELVRLCENENLNLRASAIKLFSCLVESCDESIIVENVDQKCINTLLQILQSSSDEEEIHSAMGIICHLPEIDQITQWILDAGVLPIMYKYVQDGRDRDLQRSNLVEKAVGALRRFTVPTHLEWQKIVAETGIITVLVQLLEIGSTLTKQRAALCLAEFSKSSVSLSRPIPKQKGLLCCFSAPSEIGCKVHGGVCTVKSSFCLLAAEAIGPLTRNLGESDYGVCEASLDALLTLIEGERLESGGKVLAKANAIPLIIKFLSSTSLGLQEKSLHALERIFQLAEFKQLYGASAQMPLVDLTQRSNGRVRSMSARVLAHLNVLHDQSSYF*