Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862280 | XP_003617481.1 | 97.945 | 292 | 3 | 1 | 1 | 292 | 1 | 289 | 0.0 | 591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862280 | sp|P87027|SPG1_SCHPO | 47.059 | 187 | 99 | 0 | 106 | 292 | 9 | 195 | 8.73e-63 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862280 | G7K3G2 | 97.945 | 292 | 3 | 1 | 1 | 292 | 1 | 289 | 0.0 | 591 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003630 | Msa0862280 | 0.804140 | 2.492179e-49 | -8.615850e-47 |
| Msa0005270 | Msa0862280 | 0.806109 | 9.649235e-50 | -8.615850e-47 |
| Msa0012710 | Msa0862280 | 0.818261 | 2.149978e-52 | -8.615850e-47 |
| Msa0015090 | Msa0862280 | 0.820530 | 6.534735e-53 | -8.615850e-47 |
| Msa0017320 | Msa0862280 | 0.838855 | 2.243648e-57 | -8.615850e-47 |
| Msa0032080 | Msa0862280 | 0.803905 | 2.788216e-49 | -8.615850e-47 |
| Msa0033850 | Msa0862280 | 0.821995 | 3.000474e-53 | -8.615850e-47 |
| Msa0043980 | Msa0862280 | 0.811951 | 5.413521e-51 | -8.615850e-47 |
| Msa0049750 | Msa0862280 | 0.818454 | 1.943772e-52 | -8.615850e-47 |
| Msa0051210 | Msa0862280 | 0.806836 | 6.777361e-50 | -8.615850e-47 |
| Msa0051450 | Msa0862280 | 0.814111 | 1.819414e-51 | -8.615850e-47 |
| Msa0052860 | Msa0862280 | 0.814282 | 1.668080e-51 | -8.615850e-47 |
| Msa0058310 | Msa0862280 | 0.814755 | 1.310727e-51 | -8.615850e-47 |
| Msa0061500 | Msa0862280 | 0.823264 | 1.520909e-53 | -8.615850e-47 |
| Msa0065650 | Msa0862280 | 0.820427 | 6.900562e-53 | -8.615850e-47 |
| Msa0081620 | Msa0862280 | 0.818200 | 2.218869e-52 | -8.615850e-47 |
| Msa0081630 | Msa0862280 | 0.819093 | 1.391886e-52 | -8.615850e-47 |
| Msa0081650 | Msa0862280 | 0.813905 | 2.020323e-51 | -8.615850e-47 |
| Msa0092410 | Msa0862280 | 0.836933 | 6.996489e-57 | -8.615850e-47 |
| Msa0101830 | Msa0862280 | 0.816168 | 6.354665e-52 | -8.615850e-47 |
| Msa0104230 | Msa0862280 | 0.803277 | 3.763523e-49 | -8.615850e-47 |
| Msa0111080 | Msa0862280 | 0.832603 | 8.601760e-56 | -8.615850e-47 |
| Msa0614920 | Msa0862280 | 0.817457 | 3.266046e-52 | -8.615850e-47 |
| Msa0620620 | Msa0862280 | 0.800758 | 1.239968e-48 | -8.615850e-47 |
| Msa0627350 | Msa0862280 | 0.800627 | 1.318995e-48 | -8.615850e-47 |
| Msa0654620 | Msa0862280 | 0.838503 | 2.766462e-57 | -8.615850e-47 |
| Msa0679550 | Msa0862280 | 0.830110 | 3.531643e-55 | -8.615850e-47 |
| Msa0679810 | Msa0862280 | 0.804879 | 1.747212e-49 | -8.615850e-47 |
| Msa0689780 | Msa0862280 | 0.805236 | 1.471531e-49 | -8.615850e-47 |
| Msa0692650 | Msa0862280 | 0.808181 | 3.513624e-50 | -8.615850e-47 |
| Msa0705990 | Msa0862280 | 0.834566 | 2.784005e-56 | -8.615850e-47 |
| Msa0714990 | Msa0862280 | 0.801367 | 9.308512e-49 | -8.615850e-47 |
| Msa0715410 | Msa0862280 | 0.805586 | 1.242643e-49 | -8.615850e-47 |
| Msa0721340 | Msa0862280 | 0.846321 | 2.337316e-59 | -8.615850e-47 |
| Msa0731180 | Msa0862280 | 0.832388 | 9.727620e-56 | -8.615850e-47 |
| Msa0741070 | Msa0862280 | 0.827223 | 1.761327e-54 | -8.615850e-47 |
| Msa0742150 | Msa0862280 | 0.903984 | 1.969618e-79 | -8.615850e-47 |
| Msa0750810 | Msa0862280 | 0.803260 | 3.794162e-49 | -8.615850e-47 |
| Msa0750850 | Msa0862280 | 0.811757 | 5.966543e-51 | -8.615850e-47 |
| Msa0764920 | Msa0862280 | 0.813400 | 2.608987e-51 | -8.615850e-47 |
| Msa0771580 | Msa0862280 | 0.836499 | 9.031536e-57 | -8.615850e-47 |
| Msa0775560 | Msa0862280 | 0.821608 | 3.688216e-53 | -8.615850e-47 |
| Msa0779260 | Msa0862280 | 0.823069 | 1.689305e-53 | -8.615850e-47 |
| Msa0786070 | Msa0862280 | 0.929296 | 8.518671e-93 | -8.615850e-47 |
| Msa0794210 | Msa0862280 | 0.827808 | 1.275014e-54 | -8.615850e-47 |
| Msa0805910 | Msa0862280 | 0.802828 | 4.661942e-49 | -8.615850e-47 |
| Msa0805920 | Msa0862280 | 0.850294 | 1.863277e-60 | -8.615850e-47 |
| Msa0809140 | Msa0862280 | 0.809366 | 1.960247e-50 | -8.615850e-47 |
| Msa0811040 | Msa0862280 | 0.809736 | 1.633029e-50 | -8.615850e-47 |
| Msa0812950 | Msa0862280 | 0.845782 | 3.275691e-59 | -8.615850e-47 |
| Msa0823440 | Msa0862280 | 0.868363 | 6.903430e-66 | -8.615850e-47 |
| Msa0836650 | Msa0862280 | 0.814538 | 1.463755e-51 | -8.615850e-47 |
| Msa0130520 | Msa0862280 | 0.810307 | 1.229999e-50 | -8.615850e-47 |
| Msa0136630 | Msa0862280 | 0.801207 | 1.003753e-48 | -8.615850e-47 |
| Msa0138020 | Msa0862280 | 0.839325 | 1.695042e-57 | -8.615850e-47 |
| Msa0138640 | Msa0862280 | 0.813746 | 2.190001e-51 | -8.615850e-47 |
| Msa0139000 | Msa0862280 | 0.803907 | 2.785696e-49 | -8.615850e-47 |
| Msa0142280 | Msa0862280 | 0.825554 | 4.400842e-54 | -8.615850e-47 |
| Msa0142500 | Msa0862280 | 0.811226 | 7.782982e-51 | -8.615850e-47 |
| Msa0152560 | Msa0862280 | 0.842186 | 3.016184e-58 | -8.615850e-47 |
| Msa0154920 | Msa0862280 | 0.832438 | 9.454639e-56 | -8.615850e-47 |
| Msa0172080 | Msa0862280 | 0.800835 | 1.195978e-48 | -8.615850e-47 |
| Msa0173960 | Msa0862280 | 0.812224 | 4.722232e-51 | -8.615850e-47 |
| Msa0176030 | Msa0862280 | 0.800358 | 1.496509e-48 | -8.615850e-47 |
| Msa0178510 | Msa0862280 | 0.812413 | 4.293135e-51 | -8.615850e-47 |
| Msa0185300 | Msa0862280 | 0.801353 | 9.372135e-49 | -8.615850e-47 |
| Msa0186950 | Msa0862280 | 0.814744 | 1.318259e-51 | -8.615850e-47 |
| Msa0187490 | Msa0862280 | 0.835471 | 1.645711e-56 | -8.615850e-47 |
| Msa0187830 | Msa0862280 | 0.808520 | 2.974435e-50 | -8.615850e-47 |
| Msa0196670 | Msa0862280 | 0.800022 | 1.751373e-48 | -8.615850e-47 |
| Msa0197610 | Msa0862280 | 0.826632 | 2.438252e-54 | -8.615850e-47 |
| Msa0200850 | Msa0862280 | 0.819897 | 9.122751e-53 | -8.615850e-47 |
| Msa0202580 | Msa0862280 | 0.801281 | 9.695036e-49 | -8.615850e-47 |
| Msa0202930 | Msa0862280 | 0.838550 | 2.689864e-57 | -8.615850e-47 |
| Msa0206010 | Msa0862280 | 0.808389 | 3.173197e-50 | -8.615850e-47 |
| Msa0222980 | Msa0862280 | 0.825456 | 4.642496e-54 | -8.615850e-47 |
| Msa0233370 | Msa0862280 | 0.825465 | 4.618768e-54 | -8.615850e-47 |
| Msa0236070 | Msa0862280 | 0.844267 | 8.402694e-59 | -8.615850e-47 |
| Msa0364790 | Msa0862280 | 0.814374 | 1.591989e-51 | -8.615850e-47 |
| Msa0371950 | Msa0862280 | 0.803978 | 2.692398e-49 | -8.615850e-47 |
| Msa0376910 | Msa0862280 | 0.809310 | 2.015657e-50 | -8.615850e-47 |
| Msa0397270 | Msa0862280 | 0.810569 | 1.080165e-50 | -8.615850e-47 |
| Msa0403490 | Msa0862280 | 0.835834 | 1.332007e-56 | -8.615850e-47 |
| Msa0408300 | Msa0862280 | 0.800215 | 1.600045e-48 | -8.615850e-47 |
| Msa0422180 | Msa0862280 | 0.812995 | 3.201652e-51 | -8.615850e-47 |
| Msa0427580 | Msa0862280 | 0.809499 | 1.835862e-50 | -8.615850e-47 |
| Msa0438040 | Msa0862280 | 0.812700 | 3.714879e-51 | -8.615850e-47 |
| Msa0457990 | Msa0862280 | 0.813920 | 2.004817e-51 | -8.615850e-47 |
| Msa0471900 | Msa0862280 | 0.808231 | 3.429223e-50 | -8.615850e-47 |
| Msa0477260 | Msa0862280 | 0.801258 | 9.802117e-49 | -8.615850e-47 |
| Msa0481280 | Msa0862280 | 0.820881 | 5.425631e-53 | -8.615850e-47 |
| Msa0240270 | Msa0862280 | 0.837259 | 5.776268e-57 | -8.615850e-47 |
| Msa0243480 | Msa0862280 | 0.825750 | 3.952665e-54 | -8.615850e-47 |
| Msa0244140 | Msa0862280 | 0.824649 | 7.198815e-54 | -8.615850e-47 |
| Msa0244190 | Msa0862280 | 0.827257 | 1.728408e-54 | -8.615850e-47 |
| Msa0245540 | Msa0862280 | 0.800119 | 1.673626e-48 | -8.615850e-47 |
| Msa0253180 | Msa0862280 | 0.813663 | 2.284381e-51 | -8.615850e-47 |
| Msa0257500 | Msa0862280 | 0.813112 | 3.017726e-51 | -8.615850e-47 |
| Msa0262370 | Msa0862280 | 0.813515 | 2.461892e-51 | -8.615850e-47 |
| Msa0264310 | Msa0862280 | 0.824150 | 9.431358e-54 | -8.615850e-47 |
| Msa0269560 | Msa0862280 | 0.837406 | 5.295362e-57 | -8.615850e-47 |
| Msa0274350 | Msa0862280 | 0.802864 | 4.582366e-49 | -8.615850e-47 |
| Msa0282720 | Msa0862280 | 0.800562 | 1.359673e-48 | -8.615850e-47 |
| Msa0284450 | Msa0862280 | 0.864581 | 1.097288e-64 | -8.615850e-47 |
| Msa0300150 | Msa0862280 | 0.809458 | 1.873980e-50 | -8.615850e-47 |
| Msa0307310 | Msa0862280 | 0.825288 | 5.086507e-54 | -8.615850e-47 |
| Msa0307560 | Msa0862280 | 0.815161 | 1.065519e-51 | -8.615850e-47 |
| Msa0310440 | Msa0862280 | 0.804825 | 1.793528e-49 | -8.615850e-47 |
| Msa0311470 | Msa0862280 | 0.802916 | 4.469693e-49 | -8.615850e-47 |
| Msa0314250 | Msa0862280 | 0.806186 | 9.293733e-50 | -8.615850e-47 |
| Msa0319290 | Msa0862280 | 0.808653 | 2.787120e-50 | -8.615850e-47 |
| Msa0321080 | Msa0862280 | 0.849444 | 3.221898e-60 | -8.615850e-47 |
| Msa0322680 | Msa0862280 | 0.821981 | 3.023752e-53 | -8.615850e-47 |
| Msa0326110 | Msa0862280 | 0.809630 | 1.721208e-50 | -8.615850e-47 |
| Msa0329430 | Msa0862280 | 0.805632 | 1.215708e-49 | -8.615850e-47 |
| Msa0347750 | Msa0862280 | 0.818938 | 1.509040e-52 | -8.615850e-47 |
| Msa0482940 | Msa0862280 | 0.802382 | 5.762100e-49 | -8.615850e-47 |
| Msa0485490 | Msa0862280 | 0.815485 | 9.026339e-52 | -8.615850e-47 |
| Msa0514610 | Msa0862280 | 0.811158 | 8.050935e-51 | -8.615850e-47 |
| Msa0518170 | Msa0862280 | 0.812773 | 3.580557e-51 | -8.615850e-47 |
| Msa0525610 | Msa0862280 | 0.813109 | 3.022495e-51 | -8.615850e-47 |
| Msa0530650 | Msa0862280 | 0.800897 | 1.161859e-48 | -8.615850e-47 |
| Msa0534870 | Msa0862280 | 0.801815 | 7.535040e-49 | -8.615850e-47 |
| Msa0545290 | Msa0862280 | 0.807777 | 4.282123e-50 | -8.615850e-47 |
| Msa0566350 | Msa0862280 | 0.837830 | 4.122365e-57 | -8.615850e-47 |
| Msa0566750 | Msa0862280 | 0.842778 | 2.100778e-58 | -8.615850e-47 |
| Msa0569780 | Msa0862280 | 0.816658 | 4.935814e-52 | -8.615850e-47 |
| Msa0587190 | Msa0862280 | 0.814596 | 1.421775e-51 | -8.615850e-47 |
| Msa0600890 | Msa0862280 | 0.810081 | 1.376360e-50 | -8.615850e-47 |
| Msa0844610 | Msa0862280 | 0.802167 | 6.379883e-49 | -8.615850e-47 |
| Msa0847470 | Msa0862280 | 0.810650 | 1.037296e-50 | -8.615850e-47 |
| Msa0853440 | Msa0862280 | 0.814936 | 1.194948e-51 | -8.615850e-47 |
| Msa0861470 | Msa0862280 | 0.807227 | 5.602951e-50 | -8.615850e-47 |
| Msa0861570 | Msa0862280 | 0.807700 | 4.446904e-50 | -8.615850e-47 |
| Msa0862280 | Msa0877710 | 0.823354 | 1.449468e-53 | -8.615850e-47 |
| Msa0862280 | Msa0880810 | 0.808431 | 3.108460e-50 | -8.615850e-47 |
| Msa0862280 | Msa0902830 | 0.815909 | 7.261803e-52 | -8.615850e-47 |
| Msa0862280 | Msa0932100 | 0.826187 | 3.112532e-54 | -8.615850e-47 |
| Msa0862280 | Msa0932190 | 0.818028 | 2.427003e-52 | -8.615850e-47 |
| Msa0862280 | Msa0970230 | 0.828692 | 7.806712e-55 | -8.615850e-47 |
| Msa0862280 | Msa0972810 | 0.834686 | 2.596840e-56 | -8.615850e-47 |
| Msa0862280 | Msa0980020 | 0.803698 | 3.078689e-49 | -8.615850e-47 |
| Msa0862280 | Msa0994370 | 0.814218 | 1.722683e-51 | -8.615850e-47 |
| Msa0862280 | Msa0998460 | 0.812422 | 4.273236e-51 | -8.615850e-47 |
| Msa0862280 | Msa1013070 | 0.815237 | 1.024596e-51 | -8.615850e-47 |
| Msa0862280 | Msa1023300 | 0.829531 | 4.887904e-55 | -8.615850e-47 |
| Msa0862280 | Msa1024680 | 0.807574 | 4.730797e-50 | -8.615850e-47 |
| Msa0862280 | Msa1026410 | 0.801030 | 1.091339e-48 | -8.615850e-47 |
| Msa0862280 | Msa1026640 | 0.821359 | 4.211492e-53 | -8.615850e-47 |
| Msa0862280 | Msa1042660 | 0.802421 | 5.656335e-49 | -8.615850e-47 |
| Msa0862280 | Msa1062030 | 0.821011 | 5.064665e-53 | -8.615850e-47 |
| Msa0862280 | Msa1063400 | 0.804028 | 2.629486e-49 | -8.615850e-47 |
| Msa0862280 | Msa1063420 | 0.824086 | 9.763258e-54 | -8.615850e-47 |
| Msa0862280 | Msa1065110 | 0.801940 | 7.102704e-49 | -8.615850e-47 |
| Msa0862280 | Msa1071320 | 0.809059 | 2.281673e-50 | -8.615850e-47 |
| Msa0862280 | Msa1077070 | 0.814332 | 1.625618e-51 | -8.615850e-47 |
| Msa0862280 | Msa1077340 | 0.827717 | 1.340841e-54 | -8.615850e-47 |
| Msa0862280 | Msa1094280 | 0.817490 | 3.210602e-52 | -8.615850e-47 |
| Msa0862280 | Msa1107260 | 0.821850 | 3.243327e-53 | -8.615850e-47 |
| Msa0862280 | Msa1115280 | 0.839425 | 1.596882e-57 | -8.615850e-47 |
| Msa0862280 | Msa1138530 | 0.808960 | 2.395662e-50 | -8.615850e-47 |
| Msa0862280 | Msa1143020 | 0.811066 | 8.431767e-51 | -8.615850e-47 |
| Msa0862280 | Msa1144040 | 0.816082 | 6.640985e-52 | -8.615850e-47 |
| Msa0862280 | Msa1150790 | 0.818314 | 2.091345e-52 | -8.615850e-47 |
| Msa0862280 | Msa1150800 | 0.822755 | 1.998760e-53 | -8.615850e-47 |
| Msa0862280 | Msa1150810 | 0.847168 | 1.371488e-59 | -8.615850e-47 |
| Msa0862280 | Msa1197070 | 0.803794 | 2.940508e-49 | -8.615850e-47 |
| Msa0862280 | Msa1200250 | 0.805659 | 1.199632e-49 | -8.615850e-47 |
| Msa0862280 | Msa1207310 | 0.831386 | 1.719457e-55 | -8.615850e-47 |
| Msa0862280 | Msa1208380 | 0.818564 | 1.835077e-52 | -8.615850e-47 |
| Msa0862280 | Msa1209190 | 0.825695 | 4.074166e-54 | -8.615850e-47 |
| Msa0862280 | Msa1209860 | 0.842564 | 2.393858e-58 | -8.615850e-47 |
| Msa0862280 | Msa1218580 | 0.806936 | 6.457571e-50 | -8.615850e-47 |
| Msa0862280 | Msa1224200 | 0.816020 | 6.856307e-52 | -8.615850e-47 |
| Msa0862280 | Msa1236420 | 0.804168 | 2.458674e-49 | -8.615850e-47 |
| Msa0862280 | Msa1246700 | 0.847746 | 9.512253e-60 | -8.615850e-47 |
| Msa0862280 | Msa1250110 | 0.813283 | 2.767863e-51 | -8.615850e-47 |
| Msa0862280 | Msa1250730 | 0.800221 | 1.595279e-48 | -8.615850e-47 |
| Msa0862280 | Msa1270660 | 0.835223 | 1.901622e-56 | -8.615850e-47 |
| Msa0862280 | Msa1270730 | 0.830954 | 2.194989e-55 | -8.615850e-47 |
| Msa0862280 | Msa1276340 | 0.813794 | 2.137595e-51 | -8.615850e-47 |
| Msa0862280 | Msa1279480 | 0.803683 | 3.100586e-49 | -8.615850e-47 |
| Msa0862280 | Msa1291450 | 0.819022 | 1.444250e-52 | -8.615850e-47 |
| Msa0862280 | Msa1295330 | 0.803403 | 3.545119e-49 | -8.615850e-47 |
| Msa0862280 | Msa1307180 | 0.831063 | 2.064531e-55 | -8.615850e-47 |
| Msa0862280 | Msa1316360 | 0.826095 | 3.273819e-54 | -8.615850e-47 |
| Msa0862280 | Msa1323290 | 0.824480 | 7.890821e-54 | -8.615850e-47 |
| Msa0862280 | Msa1331320 | 0.808278 | 3.350711e-50 | -8.615850e-47 |
| Msa0862280 | Msa1332050 | 0.819342 | 1.221488e-52 | -8.615850e-47 |
| Msa0862280 | Msa1335230 | 0.838508 | 2.757991e-57 | -8.615850e-47 |
| Msa0862280 | Msa1339190 | 0.810470 | 1.134363e-50 | -8.615850e-47 |
| Msa0862280 | Msa1352660 | 0.821148 | 4.709302e-53 | -8.615850e-47 |
| Msa0862280 | Msa1355890 | 0.839619 | 1.421707e-57 | -8.615850e-47 |
| Msa0862280 | Msa1365270 | 0.828922 | 6.866315e-55 | -8.615850e-47 |
| Msa0862280 | Msa1370590 | 0.804442 | 2.155903e-49 | -8.615850e-47 |
| Msa0862280 | Msa1372150 | 0.813606 | 2.350740e-51 | -8.615850e-47 |
| Msa0862280 | Msa1372280 | 0.813687 | 2.255762e-51 | -8.615850e-47 |
| Msa0862280 | Msa1376450 | 0.832470 | 9.283335e-56 | -8.615850e-47 |
| Msa0862280 | Msa1377080 | 0.808138 | 3.588671e-50 | -8.615850e-47 |
| Msa0862280 | Msa1378680 | 0.826555 | 2.544249e-54 | -8.615850e-47 |
| Msa0862280 | Msa1384100 | 0.803839 | 2.877849e-49 | -8.615850e-47 |
| Msa0862280 | Msa1391550 | 0.811024 | 8.608107e-51 | -8.615850e-47 |
| Msa0862280 | Msa1407190 | 0.805465 | 1.317365e-49 | -8.615850e-47 |
| Msa0862280 | Msa1416260 | 0.803812 | 2.915372e-49 | -8.615850e-47 |
| Msa0862280 | Msa1420270 | 0.806569 | 7.718260e-50 | -8.615850e-47 |
| Msa0862280 | Msa1421210 | 0.814458 | 1.524679e-51 | -8.615850e-47 |
| Msa0862280 | Msa1423820 | 0.839609 | 1.430690e-57 | -8.615850e-47 |
| Msa0862280 | Msa1428780 | 0.832186 | 1.091142e-55 | -8.615850e-47 |
| Msa0862280 | Msa1430130 | 0.824106 | 9.662143e-54 | -8.615850e-47 |
| Msa0862280 | Msa1430550 | 0.826445 | 2.702014e-54 | -8.615850e-47 |
| Msa0862280 | Msa1432130 | 0.828196 | 1.028083e-54 | -8.615850e-47 |
| Msa0862280 | Msa1436600 | 0.808703 | 2.718950e-50 | -8.615850e-47 |
| Msa0862280 | Msa1438840 | 0.812166 | 4.861732e-51 | -8.615850e-47 |
| Msa0862280 | Msa1442790 | 0.830479 | 2.870296e-55 | -8.615850e-47 |
| Msa0862280 | Msa1444120 | 0.802290 | 6.017142e-49 | -8.615850e-47 |
| Msa0862280 | Msa1444260 | 0.802194 | 6.298351e-49 | -8.615850e-47 |
| Msa0862280 | Msa1457160 | 0.807570 | 4.738782e-50 | -8.615850e-47 |
| Msa0862280 | Msa1460750 | 0.824908 | 6.254619e-54 | -8.615850e-47 |
| Msa0862280 | Msa1462360 | 0.810671 | 1.026618e-50 | -8.615850e-47 |
| Msa0862280 | Msa1463600 | 0.836483 | 9.112536e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862280 | MtrunA17_Chr5g0443631 | 97.945 | 292 | 3 | 1 | 1 | 292 | 1 | 289 | 0.0 | 591 |
| Msa0862280 | MtrunA17_Chr4g0024431 | 62.642 | 265 | 87 | 4 | 31 | 292 | 21 | 276 | 1.41e-113 | 328 |
| Msa0862280 | MtrunA17_Chr5g0400131 | 27.485 | 171 | 118 | 3 | 103 | 272 | 5 | 170 | 1.22e-16 | 77.0 |
| Msa0862280 | MtrunA17_Chr1g0180291 | 27.072 | 181 | 121 | 5 | 106 | 282 | 13 | 186 | 4.50e-16 | 75.5 |
| Msa0862280 | MtrunA17_Chr4g0032201 | 28.824 | 170 | 113 | 2 | 108 | 275 | 13 | 176 | 8.13e-16 | 74.7 |
| Msa0862280 | MtrunA17_Chr4g0055081 | 26.316 | 171 | 120 | 3 | 103 | 272 | 5 | 170 | 8.47e-16 | 74.3 |
| Msa0862280 | MtrunA17_Chr3g0109721 | 30.588 | 170 | 108 | 4 | 106 | 272 | 9 | 171 | 1.14e-15 | 73.9 |
| Msa0862280 | MtrunA17_Chr3g0112681 | 29.412 | 170 | 112 | 2 | 108 | 275 | 13 | 176 | 2.83e-15 | 73.2 |
| Msa0862280 | MtrunA17_Chr2g0276941 | 27.811 | 169 | 116 | 2 | 108 | 275 | 16 | 179 | 3.76e-15 | 73.2 |
| Msa0862280 | MtrunA17_Chr5g0433561 | 30.588 | 170 | 108 | 4 | 106 | 272 | 9 | 171 | 9.74e-15 | 71.2 |
| Msa0862280 | MtrunA17_Chr2g0315551 | 28.415 | 183 | 118 | 5 | 98 | 275 | 3 | 177 | 1.60e-14 | 71.2 |
| Msa0862280 | MtrunA17_Chr2g0319951 | 27.717 | 184 | 118 | 6 | 98 | 275 | 3 | 177 | 3.60e-14 | 70.1 |
| Msa0862280 | MtrunA17_Chr4g0040781 | 25.521 | 192 | 134 | 4 | 98 | 287 | 3 | 187 | 8.36e-14 | 69.3 |
| Msa0862280 | MtrunA17_Chr1g0189361 | 24.862 | 181 | 129 | 3 | 96 | 275 | 4 | 178 | 1.08e-13 | 68.9 |
| Msa0862280 | MtrunA17_Chr3g0123971 | 25.146 | 171 | 122 | 3 | 103 | 272 | 5 | 170 | 1.28e-13 | 68.6 |
| Msa0862280 | MtrunA17_Chr3g0123821 | 26.744 | 172 | 114 | 5 | 108 | 275 | 17 | 180 | 1.52e-13 | 68.6 |
| Msa0862280 | MtrunA17_Chr7g0231131 | 27.072 | 181 | 119 | 6 | 99 | 275 | 8 | 179 | 2.08e-13 | 68.2 |
| Msa0862280 | MtrunA17_Chr8g0382221 | 24.561 | 171 | 123 | 3 | 103 | 272 | 5 | 170 | 2.26e-13 | 67.8 |
| Msa0862280 | MtrunA17_Chr1g0182301 | 26.190 | 168 | 114 | 4 | 101 | 265 | 10 | 170 | 2.63e-13 | 67.8 |
| Msa0862280 | MtrunA17_Chr7g0265001 | 26.923 | 182 | 121 | 6 | 106 | 282 | 15 | 189 | 3.46e-13 | 67.4 |
| Msa0862280 | MtrunA17_Chr1g0182321 | 26.190 | 168 | 114 | 4 | 101 | 265 | 10 | 170 | 4.18e-13 | 67.0 |
| Msa0862280 | MtrunA17_Chr8g0390561 | 26.667 | 165 | 115 | 2 | 109 | 272 | 11 | 170 | 4.42e-13 | 66.6 |
| Msa0862280 | MtrunA17_Chr7g0234201 | 24.118 | 170 | 119 | 4 | 108 | 274 | 14 | 176 | 4.45e-13 | 67.0 |
| Msa0862280 | MtrunA17_Chr7g0263071 | 25.466 | 161 | 111 | 3 | 108 | 265 | 16 | 170 | 5.39e-13 | 67.0 |
| Msa0862280 | MtrunA17_Chr1g0174281 | 28.070 | 171 | 113 | 4 | 108 | 275 | 16 | 179 | 5.74e-13 | 67.0 |
| Msa0862280 | MtrunA17_Chr8g0381841 | 26.744 | 172 | 114 | 5 | 108 | 275 | 18 | 181 | 8.40e-13 | 66.6 |
| Msa0862280 | MtrunA17_Chr7g0275991 | 29.545 | 176 | 110 | 4 | 97 | 265 | 6 | 174 | 8.67e-13 | 66.6 |
| Msa0862280 | MtrunA17_Chr2g0327911 | 23.125 | 160 | 117 | 2 | 108 | 265 | 16 | 171 | 1.10e-12 | 65.9 |
| Msa0862280 | MtrunA17_Chr7g0214241 | 23.214 | 168 | 123 | 2 | 108 | 274 | 16 | 178 | 1.16e-12 | 65.9 |
| Msa0862280 | MtrunA17_Chr2g0276931 | 23.810 | 168 | 122 | 2 | 108 | 274 | 10 | 172 | 1.61e-12 | 65.1 |
| Msa0862280 | MtrunA17_Chr1g0212521 | 24.845 | 161 | 112 | 3 | 108 | 265 | 16 | 170 | 1.72e-12 | 65.5 |
| Msa0862280 | MtrunA17_Chr4g0030911 | 24.845 | 161 | 112 | 3 | 108 | 265 | 16 | 170 | 1.76e-12 | 65.5 |
| Msa0862280 | MtrunA17_Chr4g0046261 | 23.958 | 192 | 137 | 4 | 98 | 287 | 3 | 187 | 2.64e-12 | 65.1 |
| Msa0862280 | MtrunA17_Chr1g0197331 | 25.556 | 180 | 125 | 4 | 107 | 282 | 15 | 189 | 3.39e-12 | 64.7 |
| Msa0862280 | MtrunA17_Chr2g0283131 | 24.479 | 192 | 136 | 4 | 98 | 287 | 3 | 187 | 5.44e-12 | 63.9 |
| Msa0862280 | MtrunA17_Chr2g0325091 | 24.852 | 169 | 121 | 2 | 108 | 275 | 12 | 175 | 9.95e-12 | 63.2 |
| Msa0862280 | MtrunA17_Chr3g0138121 | 26.012 | 173 | 121 | 1 | 104 | 276 | 10 | 175 | 1.62e-11 | 62.8 |
| Msa0862280 | MtrunA17_Chr3g0138111 | 26.012 | 173 | 121 | 1 | 104 | 276 | 10 | 175 | 1.81e-11 | 62.8 |
| Msa0862280 | MtrunA17_Chr3g0138101 | 26.012 | 173 | 121 | 1 | 104 | 276 | 10 | 175 | 2.15e-11 | 62.4 |
| Msa0862280 | MtrunA17_Chr8g0346421 | 26.316 | 190 | 125 | 5 | 91 | 272 | 5 | 187 | 4.35e-11 | 61.6 |
| Msa0862280 | MtrunA17_Chr8g0392931 | 24.852 | 169 | 121 | 2 | 108 | 275 | 15 | 178 | 6.72e-11 | 60.8 |
| Msa0862280 | MtrunA17_Chr8g0351861 | 25.294 | 170 | 115 | 5 | 108 | 273 | 17 | 178 | 7.48e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862280 | AT5G54840.1 | 63.176 | 296 | 95 | 5 | 1 | 292 | 1 | 286 | 1.69e-123 | 354 |
| Msa0862280 | AT3G21700.3 | 54.054 | 296 | 117 | 6 | 12 | 292 | 1 | 292 | 1.59e-104 | 306 |
| Msa0862280 | AT3G21700.1 | 53.716 | 296 | 117 | 7 | 12 | 292 | 1 | 291 | 2.07e-102 | 301 |
| Msa0862280 | AT3G21700.2 | 48.347 | 242 | 105 | 7 | 12 | 238 | 1 | 237 | 2.57e-66 | 207 |
| Msa0862280 | AT5G54840.2 | 54.673 | 214 | 83 | 5 | 1 | 210 | 1 | 204 | 3.13e-65 | 204 |
| Msa0862280 | AT5G54840.3 | 53.738 | 214 | 85 | 5 | 1 | 210 | 1 | 204 | 9.01e-65 | 203 |
| Msa0862280 | AT2G44610.1 | 26.316 | 171 | 120 | 2 | 103 | 272 | 5 | 170 | 4.95e-17 | 78.2 |
| Msa0862280 | AT5G59150.1 | 27.841 | 176 | 122 | 2 | 100 | 275 | 6 | 176 | 2.61e-16 | 76.6 |
| Msa0862280 | AT1G09630.1 | 27.604 | 192 | 124 | 3 | 108 | 289 | 13 | 199 | 5.12e-16 | 75.9 |
| Msa0862280 | AT1G07410.1 | 28.235 | 170 | 114 | 3 | 108 | 275 | 13 | 176 | 1.16e-15 | 74.7 |
| Msa0862280 | AT3G46830.1 | 28.824 | 170 | 113 | 2 | 108 | 275 | 13 | 176 | 1.27e-15 | 74.7 |
| Msa0862280 | AT3G46830.2 | 28.824 | 170 | 113 | 2 | 108 | 275 | 13 | 176 | 1.27e-15 | 74.7 |
| Msa0862280 | AT1G05810.1 | 26.471 | 170 | 115 | 4 | 108 | 274 | 13 | 175 | 4.64e-15 | 73.2 |
| Msa0862280 | AT1G05810.2 | 26.471 | 170 | 115 | 4 | 108 | 274 | 59 | 221 | 8.78e-15 | 73.2 |
| Msa0862280 | AT5G45130.1 | 29.412 | 170 | 110 | 4 | 106 | 272 | 9 | 171 | 1.10e-14 | 71.6 |
| Msa0862280 | AT1G16920.1 | 26.667 | 195 | 128 | 6 | 98 | 287 | 3 | 187 | 1.46e-14 | 71.6 |
| Msa0862280 | AT4G19640.1 | 29.412 | 170 | 110 | 4 | 106 | 272 | 9 | 171 | 1.71e-14 | 71.2 |
| Msa0862280 | AT4G18800.1 | 28.415 | 183 | 118 | 5 | 98 | 275 | 3 | 177 | 2.21e-14 | 71.2 |
| Msa0862280 | AT5G03530.2 | 26.111 | 180 | 124 | 4 | 106 | 282 | 12 | 185 | 2.22e-14 | 70.9 |
| Msa0862280 | AT5G03530.1 | 26.111 | 180 | 124 | 4 | 106 | 282 | 12 | 185 | 2.22e-14 | 70.9 |
| Msa0862280 | AT5G65270.1 | 27.128 | 188 | 121 | 6 | 95 | 275 | 3 | 181 | 2.81e-14 | 70.9 |
| Msa0862280 | AT3G07410.1 | 27.647 | 170 | 113 | 4 | 108 | 274 | 13 | 175 | 4.30e-14 | 70.5 |
| Msa0862280 | AT2G43130.1 | 26.471 | 170 | 115 | 4 | 108 | 274 | 13 | 175 | 4.48e-14 | 70.1 |
| Msa0862280 | AT4G39890.1 | 25.000 | 172 | 122 | 4 | 103 | 272 | 5 | 171 | 4.52e-14 | 70.1 |
| Msa0862280 | AT2G31680.1 | 26.036 | 169 | 115 | 4 | 108 | 273 | 13 | 174 | 4.99e-14 | 70.1 |
| Msa0862280 | AT5G55080.1 | 28.090 | 178 | 111 | 4 | 100 | 272 | 6 | 171 | 5.18e-14 | 70.1 |
| Msa0862280 | AT4G39990.1 | 27.647 | 170 | 113 | 4 | 108 | 274 | 18 | 180 | 5.90e-14 | 70.1 |
| Msa0862280 | AT5G45750.1 | 28.415 | 183 | 118 | 5 | 98 | 275 | 3 | 177 | 8.79e-14 | 69.3 |
| Msa0862280 | AT3G15060.1 | 25.967 | 181 | 127 | 3 | 98 | 276 | 3 | 178 | 1.78e-13 | 68.6 |
| Msa0862280 | AT3G09900.1 | 26.190 | 168 | 114 | 4 | 101 | 265 | 10 | 170 | 1.86e-13 | 68.6 |
| Msa0862280 | AT1G06400.1 | 28.022 | 182 | 120 | 5 | 98 | 275 | 3 | 177 | 2.13e-13 | 68.6 |
| Msa0862280 | AT5G10260.1 | 23.977 | 171 | 124 | 2 | 103 | 272 | 5 | 170 | 2.23e-13 | 68.2 |
| Msa0862280 | AT5G47520.1 | 24.852 | 169 | 121 | 2 | 108 | 275 | 15 | 178 | 2.57e-13 | 68.2 |
| Msa0862280 | AT3G53610.2 | 26.347 | 167 | 113 | 4 | 108 | 271 | 16 | 175 | 2.76e-13 | 68.2 |
| Msa0862280 | AT3G53610.3 | 26.347 | 167 | 113 | 4 | 108 | 271 | 16 | 175 | 2.76e-13 | 68.2 |
| Msa0862280 | AT3G53610.1 | 26.347 | 167 | 113 | 4 | 108 | 271 | 16 | 175 | 2.76e-13 | 68.2 |
| Msa0862280 | AT5G03520.1 | 26.190 | 168 | 114 | 4 | 101 | 265 | 10 | 170 | 3.53e-13 | 67.8 |
| Msa0862280 | AT2G22290.1 | 25.434 | 173 | 119 | 4 | 103 | 272 | 5 | 170 | 4.20e-13 | 67.4 |
| Msa0862280 | AT5G59840.1 | 26.347 | 167 | 113 | 4 | 108 | 271 | 16 | 175 | 8.79e-13 | 66.6 |
| Msa0862280 | AT5G45130.2 | 29.268 | 164 | 106 | 4 | 112 | 272 | 23 | 179 | 1.03e-12 | 66.2 |
| Msa0862280 | AT5G60860.1 | 25.000 | 180 | 128 | 3 | 98 | 275 | 3 | 177 | 1.15e-12 | 66.2 |
| Msa0862280 | AT3G12160.1 | 26.316 | 171 | 116 | 4 | 108 | 275 | 16 | 179 | 1.45e-12 | 66.2 |
| Msa0862280 | AT3G46060.2 | 25.466 | 161 | 111 | 3 | 108 | 265 | 16 | 170 | 1.46e-12 | 65.9 |
| Msa0862280 | AT3G46060.3 | 25.466 | 161 | 111 | 3 | 108 | 265 | 16 | 170 | 1.46e-12 | 65.9 |
| Msa0862280 | AT3G46060.1 | 25.466 | 161 | 111 | 3 | 108 | 265 | 16 | 170 | 1.46e-12 | 65.9 |
| Msa0862280 | AT4G19640.2 | 29.661 | 118 | 82 | 1 | 106 | 222 | 9 | 126 | 1.81e-12 | 64.3 |
| Msa0862280 | AT4G18430.1 | 26.087 | 184 | 123 | 6 | 97 | 275 | 2 | 177 | 2.03e-12 | 65.5 |
| Msa0862280 | AT4G19640.3 | 29.661 | 118 | 82 | 1 | 106 | 222 | 9 | 126 | 2.37e-12 | 65.1 |
| Msa0862280 | AT1G01200.1 | 25.882 | 170 | 117 | 4 | 108 | 274 | 29 | 192 | 6.62e-12 | 64.7 |
| Msa0862280 | AT5G47960.1 | 26.163 | 172 | 115 | 5 | 108 | 275 | 16 | 179 | 1.44e-11 | 63.2 |
| Msa0862280 | AT3G54840.1 | 25.137 | 183 | 126 | 4 | 94 | 272 | 20 | 195 | 2.93e-11 | 62.0 |
| Msa0862280 | AT5G20020.1 | 26.036 | 169 | 118 | 1 | 104 | 272 | 10 | 171 | 4.32e-11 | 62.0 |
| Msa0862280 | AT5G55190.1 | 26.036 | 169 | 118 | 1 | 104 | 272 | 10 | 171 | 5.15e-11 | 61.6 |
| Msa0862280 | AT5G20010.1 | 26.036 | 169 | 118 | 1 | 104 | 272 | 10 | 171 | 5.40e-11 | 61.6 |
Find 81 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATTTAGAAGTCAATTA+TGG | 0.162376 | 5_4:+61897031 | None:intergenic |
| GCAGAGTTGTGTCATCTTCT+TGG | 0.184949 | 5_4:+61899447 | None:intergenic |
| TCTTTATTCTTTCTTGTTGT+TGG | 0.233713 | 5_4:+61899625 | None:intergenic |
| AATGGAAGGATTGAATTTAA+TGG | 0.251785 | 5_4:-61898787 | Msa0862280:CDS |
| GTTCAGGTTGACGTTAAATA+TGG | 0.252178 | 5_4:-61899415 | Msa0862280:CDS |
| ACAATTGTCCATTGTAAATC+TGG | 0.259047 | 5_4:+61897435 | None:intergenic |
| GAACAACAGCATACCAATAA+TGG | 0.265864 | 5_4:-61899202 | Msa0862280:CDS |
| ATCTGACTCATACCCATTAT+TGG | 0.276525 | 5_4:+61899189 | None:intergenic |
| GGCCAAAGCCACGTGTATTT+TGG | 0.288708 | 5_4:-61896761 | Msa0862280:three_prime_UTR |
| CCTCTAAAATGTAGTCAAAA+TGG | 0.293282 | 5_4:+61896862 | None:intergenic |
| ATAAGAAGAAGAAACAAAAT+TGG | 0.308516 | 5_4:-61896961 | Msa0862280:three_prime_UTR |
| GTTGTTGGTGTTGTTGATGA+TGG | 0.353556 | 5_4:+61899640 | None:intergenic |
| ACAATTTAGAAGTCAATTAT+GGG | 0.359970 | 5_4:+61897032 | None:intergenic |
| ACTGCAATTCCCATTCTAAT+AGG | 0.364632 | 5_4:-61897489 | Msa0862280:CDS |
| TTGTTGGGTGATTGCCATAT+TGG | 0.368640 | 5_4:-61899139 | Msa0862280:CDS |
| TGAAATAGAAATACATTAAG+TGG | 0.373620 | 5_4:-61899682 | Msa0862280:five_prime_UTR |
| CAAAGCTCTTTAACTTGCCT+TGG | 0.379264 | 5_4:-61897085 | Msa0862280:CDS |
| GCTTTGGCCTCACCCACAAC+AGG | 0.383710 | 5_4:+61896775 | None:intergenic |
| TACCAAAATACACGTGGCTT+TGG | 0.384826 | 5_4:+61896759 | None:intergenic |
| ATAGAAAGAAATTTGAAAGT+TGG | 0.387772 | 5_4:-61897059 | Msa0862280:CDS |
| AAACTTGGTTCCTATTAGAA+TGG | 0.395511 | 5_4:+61897479 | None:intergenic |
| AAACTCATGGTTTGTTCTGT+TGG | 0.397357 | 5_4:-61899340 | Msa0862280:CDS |
| AACCTTAAGATTAGTTTGTT+GGG | 0.398052 | 5_4:-61899154 | Msa0862280:CDS |
| TGTTGGGTGATTGCCATATT+GGG | 0.408372 | 5_4:-61899138 | Msa0862280:CDS |
| GACAAAACTTTGTATGTTCA+AGG | 0.421423 | 5_4:-61898765 | Msa0862280:CDS |
| ACTCTGCAGGAAAATTGTTC+AGG | 0.422078 | 5_4:-61899431 | Msa0862280:CDS |
| GTGTTGCACTTGAAAAGAAA+AGG | 0.422846 | 5_4:+61897147 | None:intergenic |
| GTTGTTGATGATGGGGCGTT+TGG | 0.423400 | 5_4:+61899649 | None:intergenic |
| CACCCAACAAACTAATCTTA+AGG | 0.431894 | 5_4:+61899152 | None:intergenic |
| CAATTGTCCATTGTAAATCT+GGG | 0.433079 | 5_4:+61897436 | None:intergenic |
| TTGTTGGTGTTGTTGATGAT+GGG | 0.437038 | 5_4:+61899641 | None:intergenic |
| AACAACAGCATACCAATAAT+GGG | 0.438949 | 5_4:-61899201 | Msa0862280:CDS |
| TTAAATATGGTATGCTTCAA+AGG | 0.439167 | 5_4:-61899402 | Msa0862280:CDS |
| TCTCCGGCTACGGTTGATGA+TGG | 0.441368 | 5_4:-61899235 | Msa0862280:CDS |
| AACTGCATCTTTACAAGCCA+TGG | 0.445088 | 5_4:+61898508 | None:intergenic |
| AGTTTCCCCTGTTGTGGGTG+AGG | 0.447068 | 5_4:-61896782 | Msa0862280:three_prime_UTR |
| GGCTTATGCAAGGGCAATGA+AGG | 0.452873 | 5_4:-61897174 | Msa0862280:CDS |
| GAACCTTAAGATTAGTTTGT+TGG | 0.454454 | 5_4:-61899155 | Msa0862280:CDS |
| AGTGCAGTTTCCCCTGTTGT+GGG | 0.455251 | 5_4:-61896787 | Msa0862280:intron |
| AGAAAAGAGGAGTTTGCAAA+TGG | 0.455607 | 5_4:-61898805 | Msa0862280:CDS |
| AACTTGGTTCCTATTAGAAT+GGG | 0.455621 | 5_4:+61897480 | None:intergenic |
| CCTAAAATAACACGTAGATT+AGG | 0.461854 | 5_4:+61896885 | None:intergenic |
| GTCGTCGTCGTCTCCGGCTA+CGG | 0.469833 | 5_4:-61899245 | Msa0862280:CDS |
| TGAAGCAAGAAAGTGGAATC+AGG | 0.481024 | 5_4:-61897884 | Msa0862280:intron |
| TAGTGCAGTTTCCCCTGTTG+TGG | 0.484031 | 5_4:-61896788 | Msa0862280:intron |
| AAGAGGAGTTTGCAAATGGA+AGG | 0.488557 | 5_4:-61898801 | Msa0862280:CDS |
| GCCGTTGTCGTCGTCGTCTC+CGG | 0.494134 | 5_4:-61899251 | Msa0862280:CDS |
| ATCACATTATCCTAAAGAAA+AGG | 0.495864 | 5_4:-61896699 | Msa0862280:three_prime_UTR |
| TAAATATGGTATGCTTCAAA+GGG | 0.510192 | 5_4:-61899401 | Msa0862280:CDS |
| GTATGAGTCAGATTCTGATT+TGG | 0.522092 | 5_4:-61899179 | Msa0862280:CDS |
| AAATTTCTTTCTATCGTCCA+AGG | 0.528916 | 5_4:+61897068 | None:intergenic |
| GTTCATTTGGAATAAACTCA+TGG | 0.528985 | 5_4:-61899353 | Msa0862280:CDS |
| AAACCATCATCAACCGTAGC+CGG | 0.529864 | 5_4:+61899232 | None:intergenic |
| TTCATATTGACTTGCTAGGA+AGG | 0.530741 | 5_4:-61896910 | Msa0862280:three_prime_UTR |
| ATTATCCTAAAGAAAAGGAA+AGG | 0.532691 | 5_4:-61896694 | None:intergenic |
| TCTAACAAAATCATCAAACT+TGG | 0.542555 | 5_4:+61897464 | None:intergenic |
| GATAATCTTCTATATTGAGC+TGG | 0.545732 | 5_4:+61899310 | None:intergenic |
| AGAAGATGACACAACTCTGC+AGG | 0.552513 | 5_4:-61899444 | Msa0862280:CDS |
| TACAGGCAAGGGCTTATGCA+AGG | 0.559748 | 5_4:-61897184 | Msa0862280:intron |
| TGTTGCACTTGAAAAGAAAA+GGG | 0.560066 | 5_4:+61897148 | None:intergenic |
| TAGGAAATGAGGTAGAAAAG+AGG | 0.564038 | 5_4:-61898818 | Msa0862280:CDS |
| GTCCTTGGATCAAATTCCCA+TGG | 0.573998 | 5_4:-61898525 | Msa0862280:CDS |
| GGTACAGTGAAGCAAGAAAG+TGG | 0.579957 | 5_4:-61897891 | Msa0862280:CDS |
| AATTGTCCATTGTAAATCTG+GGG | 0.582951 | 5_4:+61897437 | None:intergenic |
| TGTTGGTGTTGTTGATGATG+GGG | 0.586363 | 5_4:+61899642 | None:intergenic |
| GATCAAGTACGTAGGAAATG+AGG | 0.589406 | 5_4:-61898829 | Msa0862280:CDS |
| GAAATAGAAATACATTAAGT+GGG | 0.592211 | 5_4:-61899681 | Msa0862280:five_prime_UTR |
| ACAATGGACAATTGTAACAC+AGG | 0.603332 | 5_4:-61897427 | Msa0862280:intron |
| AAGAAGAACAAGAAGAAGAG+AGG | 0.606686 | 5_4:-61899563 | Msa0862280:five_prime_UTR |
| TCTATTTCACACAGAAACAG+AGG | 0.619681 | 5_4:+61899696 | None:intergenic |
| GCCGGAGACGACGACGACAA+CGG | 0.620739 | 5_4:+61899250 | None:intergenic |
| CTTTGGCCTCACCCACAACA+GGG | 0.630947 | 5_4:+61896776 | None:intergenic |
| ACAGGCAAGGGCTTATGCAA+GGG | 0.634009 | 5_4:-61897183 | Msa0862280:intron |
| ACTGCATCTTTACAAGCCAT+GGG | 0.635433 | 5_4:+61898509 | None:intergenic |
| AGAGGGTGATGTGAATGGTG+TGG | 0.635625 | 5_4:-61896844 | Msa0862280:three_prime_UTR |
| AGCCATGGGAATTTGATCCA+AGG | 0.654764 | 5_4:+61898523 | None:intergenic |
| ATTGTCCATTGTAAATCTGG+GGG | 0.655553 | 5_4:+61897438 | None:intergenic |
| TGAACAAAGCCATATCCCAA+TGG | 0.663961 | 5_4:-61899491 | Msa0862280:exon |
| TAGTACATATAAAATAAGAG+AGG | 0.665429 | 5_4:-61896987 | Msa0862280:three_prime_UTR |
| TTTGGCCTCACCCACAACAG+GGG | 0.694736 | 5_4:+61896777 | None:intergenic |
| ACAAAATACCAAAATACACG+TGG | 0.703835 | 5_4:+61896753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAATATAGTAATATTT+CGG | + | chr5_4:61898392-61898411 | None:intergenic | 10.0% |
| !! | ATTGATGAAAAATTATTATG+TGG | - | chr5_4:61897823-61897842 | Msa0862280:intron | 15.0% |
| !! | TTGATGAAAAATTATTATGT+GGG | - | chr5_4:61897824-61897843 | Msa0862280:intron | 15.0% |
| !! | AACTAAAAATGTTAAGTTAA+AGG | + | chr5_4:61898059-61898078 | None:intergenic | 15.0% |
| !! | AAACATAATACATCTAATTA+GGG | + | chr5_4:61898845-61898864 | None:intergenic | 15.0% |
| !! | AAAACATAATACATCTAATT+AGG | + | chr5_4:61898846-61898865 | None:intergenic | 15.0% |
| !!! | ATTAGATGTATTATGTTTTA+TGG | - | chr5_4:61898847-61898866 | Msa0862280:intron | 15.0% |
| !!! | TTACTTTTTACCATATTATT+TGG | - | chr5_4:61899144-61899163 | Msa0862280:CDS | 15.0% |
| !! | AATAAAAAAGCCAAATAATA+TGG | + | chr5_4:61899157-61899176 | None:intergenic | 15.0% |
| !! | TGAAATAGAAATACATTAAG+TGG | - | chr5_4:61896710-61896729 | Msa0862280:three_prime_UTR | 20.0% |
| !! | GAAATAGAAATACATTAAGT+GGG | - | chr5_4:61896711-61896730 | Msa0862280:three_prime_UTR | 20.0% |
| !! | TTTACCTTAAATGTTGAAAT+GGG | - | chr5_4:61897309-61897328 | Msa0862280:intron | 20.0% |
| !! | TCGAAAATCATATAATTCAA+AGG | + | chr5_4:61897455-61897474 | None:intergenic | 20.0% |
| !!! | TTATATGATTTTCGATTTGT+TGG | - | chr5_4:61897460-61897479 | Msa0862280:CDS | 20.0% |
| !!! | TCGTATTTCATTTTGTATAT+GGG | - | chr5_4:61897653-61897672 | Msa0862280:intron | 20.0% |
| !! | TAAAAAATAAATGCAGAACA+TGG | + | chr5_4:61897734-61897753 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATTTCTCTCATT+AGG | - | chr5_4:61897747-61897766 | Msa0862280:intron | 20.0% |
| !! | TGATGAAAAATTATTATGTG+GGG | - | chr5_4:61897825-61897844 | Msa0862280:intron | 20.0% |
| !! | TAACCTCAAAATTAAGTTAA+GGG | + | chr5_4:61898000-61898019 | None:intergenic | 20.0% |
| !! | TTAACCTCAAAATTAAGTTA+AGG | + | chr5_4:61898001-61898020 | None:intergenic | 20.0% |
| !!! | GTGACACTTTTTAAAATTAT+AGG | + | chr5_4:61898030-61898049 | None:intergenic | 20.0% |
| !!! | TAACATTTTTAGTTCATATG+TGG | - | chr5_4:61898065-61898084 | Msa0862280:intron | 20.0% |
| !!! | TTTTCTCGAATACATATAAA+CGG | + | chr5_4:61898288-61898307 | None:intergenic | 20.0% |
| !! | TTTATATGTATTCGAGAAAA+AGG | - | chr5_4:61898288-61898307 | Msa0862280:intron | 20.0% |
| !! | AACCTCAAAATTTAGTTAAA+AGG | - | chr5_4:61898349-61898368 | Msa0862280:intron | 20.0% |
| !! | TGTATAAGTTACGAATATAA+TGG | - | chr5_4:61898423-61898442 | Msa0862280:intron | 20.0% |
| !! | TTCTTACTATAATAGTTCAA+AGG | + | chr5_4:61898645-61898664 | None:intergenic | 20.0% |
| !!! | TATAGTAAGAAAAAGTTTTG+AGG | - | chr5_4:61898654-61898673 | Msa0862280:intron | 20.0% |
| !!! | AAAAGTAACACTTTGTTTAA+AGG | + | chr5_4:61899132-61899151 | None:intergenic | 20.0% |
| !!! | CAAAATTTTCAAGTTTATCA+TGG | - | chr5_4:61899284-61899303 | Msa0862280:CDS | 20.0% |
| !! | ATAGAAAGAAATTTGAAAGT+TGG | - | chr5_4:61899333-61899352 | Msa0862280:CDS | 20.0% |
| !! | ACAATTTAGAAGTCAATTAT+GGG | + | chr5_4:61899363-61899382 | None:intergenic | 20.0% |
| !! | AACAATTTAGAAGTCAATTA+TGG | + | chr5_4:61899364-61899383 | None:intergenic | 20.0% |
| !!! | ATTTTATATGTACTAGACAA+AGG | + | chr5_4:61899400-61899419 | None:intergenic | 20.0% |
| !! | TAGTACATATAAAATAAGAG+AGG | - | chr5_4:61899405-61899424 | Msa0862280:CDS | 20.0% |
| !! | ATAAGAAGAAGAAACAAAAT+TGG | - | chr5_4:61899431-61899450 | Msa0862280:CDS | 20.0% |
| !! | TCTTTATTCTTTCTTGTTGT+TGG | + | chr5_4:61896770-61896789 | None:intergenic | 25.0% |
| ! | TTAAATATGGTATGCTTCAA+AGG | - | chr5_4:61896990-61897009 | Msa0862280:three_prime_UTR | 25.0% |
| ! | TAAATATGGTATGCTTCAAA+GGG | - | chr5_4:61896991-61897010 | Msa0862280:three_prime_UTR | 25.0% |
| !!! | AACCTTAAGATTAGTTTGTT+GGG | - | chr5_4:61897238-61897257 | Msa0862280:intron | 25.0% |
| !! | AAAAAGTAGTTTTCCCAATA+TGG | + | chr5_4:61897270-61897289 | None:intergenic | 25.0% |
| !!! | TATTGGGAAAACTACTTTTT+TGG | - | chr5_4:61897270-61897289 | Msa0862280:intron | 25.0% |
| ! | CTTTACCTTAAATGTTGAAA+TGG | - | chr5_4:61897308-61897327 | Msa0862280:intron | 25.0% |
| !! | ATATGTTTGATTAGAAGTGT+CGG | + | chr5_4:61897392-61897411 | None:intergenic | 25.0% |
| ! | GTATGTATTTCATAGGTTAT+AGG | - | chr5_4:61897505-61897524 | Msa0862280:intron | 25.0% |
| ! | AATGGAAGGATTGAATTTAA+TGG | - | chr5_4:61897605-61897624 | Msa0862280:intron | 25.0% |
| !! | CTCGTATTTCATTTTGTATA+TGG | - | chr5_4:61897652-61897671 | Msa0862280:intron | 25.0% |
| ! | TTATTATGTGGGGTTTAATT+AGG | - | chr5_4:61897835-61897854 | Msa0862280:intron | 25.0% |
| ! | TAAGTTAAGGGAAAAAAAGA+AGG | + | chr5_4:61897988-61898007 | None:intergenic | 25.0% |
| !! | TTTCCCTTAACTTAATTTTG+AGG | - | chr5_4:61897994-61898013 | Msa0862280:intron | 25.0% |
| !! | GAAGGAAACATTTTAAATAG+AGG | - | chr5_4:61898110-61898129 | Msa0862280:intron | 25.0% |
| !!! | ACATTTTAAAACCTATGCTT+TGG | - | chr5_4:61898181-61898200 | Msa0862280:intron | 25.0% |
| !!! | CTAAATTTTGAGGTTCAAAT+TGG | + | chr5_4:61898344-61898363 | None:intergenic | 25.0% |
| !!! | GTCCTTTTAACTAAATTTTG+AGG | + | chr5_4:61898354-61898373 | None:intergenic | 25.0% |
| ! | TCACTGAAATTAAATTTCGT+TGG | - | chr5_4:61898552-61898571 | Msa0862280:intron | 25.0% |
| !!! | AATAAAAAGCATTTGGAAGT+TGG | + | chr5_4:61898609-61898628 | None:intergenic | 25.0% |
| !!! | GTGTGAAAATAAAAAGCATT+TGG | + | chr5_4:61898616-61898635 | None:intergenic | 25.0% |
| ! | TGAGGTAGTTAAAATAGAAA+TGG | - | chr5_4:61898672-61898691 | Msa0862280:intron | 25.0% |
| !! | GTAAGTGACATTAAATTTTC+AGG | - | chr5_4:61898757-61898776 | Msa0862280:CDS | 25.0% |
| ! | TCTAACAAAATCATCAAACT+TGG | + | chr5_4:61898931-61898950 | None:intergenic | 25.0% |
| ! | TAATCAACTTACATCTTAAG+TGG | - | chr5_4:61899007-61899026 | Msa0862280:intron | 25.0% |
| !!! | ATCTTAAGTGGATTCAATTT+TGG | - | chr5_4:61899019-61899038 | Msa0862280:intron | 25.0% |
| !!! | TCTTAAGTGGATTCAATTTT+GGG | - | chr5_4:61899020-61899039 | Msa0862280:intron | 25.0% |
| !!! | TTCATTGCTTTTCTTTTTGT+GGG | - | chr5_4:61899087-61899106 | Msa0862280:intron | 25.0% |
| !!! | CATTTTGACTACATTTTAGA+GGG | - | chr5_4:61899531-61899550 | Msa0862280:five_prime_UTR | 25.0% |
| ! | ATCACATTATCCTAAAGAAA+AGG | - | chr5_4:61899693-61899712 | Msa0862280:five_prime_UTR | 25.0% |
| ! | CTTTTGTTGGTCAGTTTTTT+AGG | - | chr5_4:61897017-61897036 | Msa0862280:three_prime_UTR | 30.0% |
| !!! | GTCAGTTTTTTAGGTTCATT+TGG | - | chr5_4:61897026-61897045 | Msa0862280:exon | 30.0% |
| ! | GTTCATTTGGAATAAACTCA+TGG | - | chr5_4:61897039-61897058 | Msa0862280:CDS | 30.0% |
| GATAATCTTCTATATTGAGC+TGG | + | chr5_4:61897085-61897104 | None:intergenic | 30.0% | |
| AACAACAGCATACCAATAAT+GGG | - | chr5_4:61897191-61897210 | Msa0862280:intron | 30.0% | |
| !! | GAACCTTAAGATTAGTTTGT+TGG | - | chr5_4:61897237-61897256 | Msa0862280:intron | 30.0% |
| ATGACCCATTTCAACATTTA+AGG | + | chr5_4:61897316-61897335 | None:intergenic | 30.0% | |
| !!! | CATTTTAGTGTTGACTATGT+TGG | - | chr5_4:61897347-61897366 | Msa0862280:intron | 30.0% |
| ATCTGGTGTATGTATTTCAT+AGG | - | chr5_4:61897498-61897517 | Msa0862280:intron | 30.0% | |
| !!! | TTTTTTCAGATCAAGTACGT+AGG | - | chr5_4:61897555-61897574 | Msa0862280:intron | 30.0% |
| GACAAAACTTTGTATGTTCA+AGG | - | chr5_4:61897627-61897646 | Msa0862280:intron | 30.0% | |
| ! | CAACTACTAGTTTATAGTGA+AGG | - | chr5_4:61898229-61898248 | Msa0862280:intron | 30.0% |
| TTCGAGAAAAAGGACTAATA+TGG | - | chr5_4:61898298-61898317 | Msa0862280:intron | 30.0% | |
| TCGAGAAAAAGGACTAATAT+GGG | - | chr5_4:61898299-61898318 | Msa0862280:intron | 30.0% | |
| !!! | AATTTTGAGGTTCAAATTGG+TGG | + | chr5_4:61898341-61898360 | None:intergenic | 30.0% |
| ! | ATTTCGGCTTACTTATTTCT+TGG | + | chr5_4:61898376-61898395 | None:intergenic | 30.0% |
| AACTTGGTTCCTATTAGAAT+GGG | + | chr5_4:61898915-61898934 | None:intergenic | 30.0% | |
| AAACTTGGTTCCTATTAGAA+TGG | + | chr5_4:61898916-61898935 | None:intergenic | 30.0% | |
| AATTGTCCATTGTAAATCTG+GGG | + | chr5_4:61898958-61898977 | None:intergenic | 30.0% | |
| CAATTGTCCATTGTAAATCT+GGG | + | chr5_4:61898959-61898978 | None:intergenic | 30.0% | |
| ACAATTGTCCATTGTAAATC+TGG | + | chr5_4:61898960-61898979 | None:intergenic | 30.0% | |
| !! | CTTAAGTGGATTCAATTTTG+GGG | - | chr5_4:61899021-61899040 | Msa0862280:intron | 30.0% |
| ACTTTAATCAACATGCATGT+AGG | + | chr5_4:61899047-61899066 | None:intergenic | 30.0% | |
| !! | GTTCATTGCTTTTCTTTTTG+TGG | - | chr5_4:61899086-61899105 | Msa0862280:intron | 30.0% |
| TGTTGCACTTGAAAAGAAAA+GGG | + | chr5_4:61899247-61899266 | None:intergenic | 30.0% | |
| AAATTTCTTTCTATCGTCCA+AGG | + | chr5_4:61899327-61899346 | None:intergenic | 30.0% | |
| !!! | TCTTTTCATATTGACTTGCT+AGG | - | chr5_4:61899478-61899497 | Msa0862280:exon | 30.0% |
| CCTAAAATAACACGTAGATT+AGG | + | chr5_4:61899510-61899529 | None:intergenic | 30.0% | |
| !!! | CCTAATCTACGTGTTATTTT+AGG | - | chr5_4:61899507-61899526 | Msa0862280:five_prime_UTR | 30.0% |
| !! | CCTCTAAAATGTAGTCAAAA+TGG | + | chr5_4:61899533-61899552 | None:intergenic | 30.0% |
| !!! | CCATTTTGACTACATTTTAG+AGG | - | chr5_4:61899530-61899549 | Msa0862280:five_prime_UTR | 30.0% |
| ACAAAATACCAAAATACACG+TGG | + | chr5_4:61899642-61899661 | None:intergenic | 30.0% | |
| !! | TTGTTGGTGTTGTTGATGAT+GGG | + | chr5_4:61896754-61896773 | None:intergenic | 35.0% |
| AAGAAGAACAAGAAGAAGAG+AGG | - | chr5_4:61896829-61896848 | Msa0862280:three_prime_UTR | 35.0% | |
| !! | CTTGAATCACTTTTGCCATT+GGG | + | chr5_4:61896919-61896938 | None:intergenic | 35.0% |
| !! | TCTTGAATCACTTTTGCCAT+TGG | + | chr5_4:61896920-61896939 | None:intergenic | 35.0% |
| !! | GTTCAGGTTGACGTTAAATA+TGG | - | chr5_4:61896977-61896996 | Msa0862280:three_prime_UTR | 35.0% |
| !!! | CTTCAAAGGGTATCTTTTGT+TGG | - | chr5_4:61897004-61897023 | Msa0862280:three_prime_UTR | 35.0% |
| !! | AAACTCATGGTTTGTTCTGT+TGG | - | chr5_4:61897052-61897071 | Msa0862280:CDS | 35.0% |
| GAACAACAGCATACCAATAA+TGG | - | chr5_4:61897190-61897209 | Msa0862280:intron | 35.0% | |
| ATCTGACTCATACCCATTAT+TGG | + | chr5_4:61897206-61897225 | None:intergenic | 35.0% | |
| GTATGAGTCAGATTCTGATT+TGG | - | chr5_4:61897213-61897232 | Msa0862280:intron | 35.0% | |
| CACCCAACAAACTAATCTTA+AGG | + | chr5_4:61897243-61897262 | None:intergenic | 35.0% | |
| GGTCTTTGAATGTTTGAATC+TGG | - | chr5_4:61897481-61897500 | Msa0862280:CDS | 35.0% | |
| TAGGAAATGAGGTAGAAAAG+AGG | - | chr5_4:61897574-61897593 | Msa0862280:intron | 35.0% | |
| AGAAAAGAGGAGTTTGCAAA+TGG | - | chr5_4:61897587-61897606 | Msa0862280:intron | 35.0% | |
| ! | TTTTGTATATGGGATGTTGC+AGG | - | chr5_4:61897663-61897682 | Msa0862280:intron | 35.0% |
| ATTAGGTGACAAAAAGTCCT+TGG | - | chr5_4:61897852-61897871 | Msa0862280:intron | 35.0% | |
| !! | CTCTAACATGGAGTTGATAT+GGG | - | chr5_4:61898088-61898107 | Msa0862280:intron | 35.0% |
| AGTTGGAACTACACTTTACT+TGG | + | chr5_4:61898592-61898611 | None:intergenic | 35.0% | |
| TGAAACTGTAGTAGCCTTTA+TGG | - | chr5_4:61898724-61898743 | Msa0862280:intron | 35.0% | |
| TTACCACTTATCAGCCATAA+AGG | + | chr5_4:61898741-61898760 | None:intergenic | 35.0% | |
| GTCTGCAATTCAATGTAACA+TGG | + | chr5_4:61898885-61898904 | None:intergenic | 35.0% | |
| ACTGCAATTCCCATTCTAAT+AGG | - | chr5_4:61898903-61898922 | Msa0862280:intron | 35.0% | |
| ATTGTCCATTGTAAATCTGG+GGG | + | chr5_4:61898957-61898976 | None:intergenic | 35.0% | |
| ACAATGGACAATTGTAACAC+AGG | - | chr5_4:61898965-61898984 | Msa0862280:intron | 35.0% | |
| GACTTGTACCTTTCATATAC+AGG | - | chr5_4:61899191-61899210 | Msa0862280:CDS | 35.0% | |
| TACCTTTCATATACAGGCAA+GGG | - | chr5_4:61899197-61899216 | Msa0862280:CDS | 35.0% | |
| GTGTTGCACTTGAAAAGAAA+AGG | + | chr5_4:61899248-61899267 | None:intergenic | 35.0% | |
| !! | TTCATATTGACTTGCTAGGA+AGG | - | chr5_4:61899482-61899501 | Msa0862280:exon | 35.0% |
| !! | ATTTTAGAGGGTGATGTGAA+TGG | - | chr5_4:61899543-61899562 | Msa0862280:five_prime_UTR | 35.0% |
| !!! | AATGGTGTGGCTCATTTTTT+TGG | - | chr5_4:61899561-61899580 | Msa0862280:five_prime_UTR | 35.0% |
| !!! | GCTCATTTTTTTGGTGTCAT+AGG | - | chr5_4:61899570-61899589 | Msa0862280:five_prime_UTR | 35.0% |
| !! | TGTTGGTGTTGTTGATGATG+GGG | + | chr5_4:61896753-61896772 | None:intergenic | 40.0% |
| !! | GTTGTTGGTGTTGTTGATGA+TGG | + | chr5_4:61896755-61896774 | None:intergenic | 40.0% |
| TGAACAAAGCCATATCCCAA+TGG | - | chr5_4:61896901-61896920 | Msa0862280:three_prime_UTR | 40.0% | |
| !! | TCACTTTTGCCATTGGGATA+TGG | + | chr5_4:61896913-61896932 | None:intergenic | 40.0% |
| ACTCTGCAGGAAAATTGTTC+AGG | - | chr5_4:61896961-61896980 | Msa0862280:three_prime_UTR | 40.0% | |
| TTGTTGGGTGATTGCCATAT+TGG | - | chr5_4:61897253-61897272 | Msa0862280:intron | 40.0% | |
| TGTTGGGTGATTGCCATATT+GGG | - | chr5_4:61897254-61897273 | Msa0862280:intron | 40.0% | |
| !! | ATTCAAAGGCGTCTCAATGT+CGG | + | chr5_4:61897441-61897460 | None:intergenic | 40.0% |
| GATCAAGTACGTAGGAAATG+AGG | - | chr5_4:61897563-61897582 | Msa0862280:intron | 40.0% | |
| AAGAGGAGTTTGCAAATGGA+AGG | - | chr5_4:61897591-61897610 | Msa0862280:intron | 40.0% | |
| ACTGCATCTTTACAAGCCAT+GGG | + | chr5_4:61897886-61897905 | None:intergenic | 40.0% | |
| AACTGCATCTTTACAAGCCA+TGG | + | chr5_4:61897887-61897906 | None:intergenic | 40.0% | |
| !! | GTTCATATGTGGCTCTAACA+TGG | - | chr5_4:61898076-61898095 | Msa0862280:intron | 40.0% |
| !! | GCTCTAACATGGAGTTGATA+TGG | - | chr5_4:61898087-61898106 | Msa0862280:intron | 40.0% |
| !! | AACATGGAGTTGATATGGGA+AGG | - | chr5_4:61898092-61898111 | Msa0862280:intron | 40.0% |
| !! | AACCTATGCTTTGGAGAAGA+AGG | - | chr5_4:61898190-61898209 | Msa0862280:intron | 40.0% |
| AACCTTCTTCTCCAAAGCAT+AGG | + | chr5_4:61898195-61898214 | None:intergenic | 40.0% | |
| GACTAATATGGGACCAATCT+GGG | - | chr5_4:61898310-61898329 | Msa0862280:intron | 40.0% | |
| !! | CTGTGTTTTTGCAGTGTTGT+TGG | - | chr5_4:61898476-61898495 | Msa0862280:CDS | 40.0% |
| !! | GTTTTTGCAGTGTTGTTGGA+TGG | - | chr5_4:61898480-61898499 | Msa0862280:CDS | 40.0% |
| TGAAGCAAGAAAGTGGAATC+AGG | - | chr5_4:61898508-61898527 | Msa0862280:CDS | 40.0% | |
| TGGAACTACACTTTACTTGG+TGG | + | chr5_4:61898589-61898608 | None:intergenic | 40.0% | |
| TAGCCTTTATGGCTGATAAG+TGG | - | chr5_4:61898735-61898754 | Msa0862280:CDS | 40.0% | |
| GTACCTTTCATATACAGGCA+AGG | - | chr5_4:61899196-61899215 | Msa0862280:CDS | 40.0% | |
| !! | CAAAGCTCTTTAACTTGCCT+TGG | - | chr5_4:61899307-61899326 | Msa0862280:CDS | 40.0% |
| TACCAAAATACACGTGGCTT+TGG | + | chr5_4:61899636-61899655 | None:intergenic | 40.0% | |
| !!! | TGATGGGGCGTTTGGTTTTT+GGG | + | chr5_4:61896738-61896757 | None:intergenic | 45.0% |
| !!! | ATGATGGGGCGTTTGGTTTT+TGG | + | chr5_4:61896739-61896758 | None:intergenic | 45.0% |
| GCAGAGTTGTGTCATCTTCT+TGG | + | chr5_4:61896948-61896967 | None:intergenic | 45.0% | |
| AGAAGATGACACAACTCTGC+AGG | - | chr5_4:61896948-61896967 | Msa0862280:three_prime_UTR | 45.0% | |
| AAACCATCATCAACCGTAGC+CGG | + | chr5_4:61897163-61897182 | None:intergenic | 45.0% | |
| GTCCTTGGATCAAATTCCCA+TGG | - | chr5_4:61897867-61897886 | Msa0862280:intron | 45.0% | |
| AGCCATGGGAATTTGATCCA+AGG | + | chr5_4:61897872-61897891 | None:intergenic | 45.0% | |
| GGACTAATATGGGACCAATC+TGG | - | chr5_4:61898309-61898328 | Msa0862280:intron | 45.0% | |
| TAATATGGGACCAATCTGGG+TGG | - | chr5_4:61898313-61898332 | Msa0862280:intron | 45.0% | |
| GGTACAGTGAAGCAAGAAAG+TGG | - | chr5_4:61898501-61898520 | Msa0862280:CDS | 45.0% | |
| GACTTCCCCCAGATTTACAA+TGG | - | chr5_4:61898949-61898968 | Msa0862280:intron | 45.0% | |
| AGCCCTTGCCTGTATATGAA+AGG | + | chr5_4:61899202-61899221 | None:intergenic | 45.0% | |
| !! | GTTGTTGATGATGGGGCGTT+TGG | + | chr5_4:61896746-61896765 | None:intergenic | 50.0% |
| TACAGGCAAGGGCTTATGCA+AGG | - | chr5_4:61899208-61899227 | Msa0862280:CDS | 50.0% | |
| ACAGGCAAGGGCTTATGCAA+GGG | - | chr5_4:61899209-61899228 | Msa0862280:CDS | 50.0% | |
| GGCTTATGCAAGGGCAATGA+AGG | - | chr5_4:61899218-61899237 | Msa0862280:CDS | 50.0% | |
| AGAGGGTGATGTGAATGGTG+TGG | - | chr5_4:61899548-61899567 | Msa0862280:five_prime_UTR | 50.0% | |
| CAACAGGGGAAACTGCACTA+AGG | + | chr5_4:61899604-61899623 | None:intergenic | 50.0% | |
| TAGTGCAGTTTCCCCTGTTG+TGG | - | chr5_4:61899604-61899623 | Msa0862280:five_prime_UTR | 50.0% | |
| AGTGCAGTTTCCCCTGTTGT+GGG | - | chr5_4:61899605-61899624 | Msa0862280:five_prime_UTR | 50.0% | |
| ! | GGCCAAAGCCACGTGTATTT+TGG | - | chr5_4:61899631-61899650 | Msa0862280:five_prime_UTR | 50.0% |
| !! | TCTCCGGCTACGGTTGATGA+TGG | - | chr5_4:61897157-61897176 | Msa0862280:CDS | 55.0% |
| ! | ATTGGTGGCTCCACCCAGAT+TGG | + | chr5_4:61898326-61898345 | None:intergenic | 55.0% |
| AGTTTCCCCTGTTGTGGGTG+AGG | - | chr5_4:61899610-61899629 | Msa0862280:five_prime_UTR | 55.0% | |
| TTTGGCCTCACCCACAACAG+GGG | + | chr5_4:61899618-61899637 | None:intergenic | 55.0% | |
| CTTTGGCCTCACCCACAACA+GGG | + | chr5_4:61899619-61899638 | None:intergenic | 55.0% | |
| GCTTTGGCCTCACCCACAAC+AGG | + | chr5_4:61899620-61899639 | None:intergenic | 60.0% | |
| GCCGTTGTCGTCGTCGTCTC+CGG | - | chr5_4:61897141-61897160 | Msa0862280:CDS | 65.0% | |
| GCCGGAGACGACGACGACAA+CGG | + | chr5_4:61897145-61897164 | None:intergenic | 65.0% | |
| GTCGTCGTCGTCTCCGGCTA+CGG | - | chr5_4:61897147-61897166 | Msa0862280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 61896697 | 61899717 | 61896697 | ID=Msa0862280;Name=Msa0862280 |
| chr5_4 | mRNA | 61896697 | 61899717 | 61896697 | ID=Msa0862280-mRNA-1;Parent=Msa0862280;Name=Msa0862280-mRNA-1;_AED=0.07;_eAED=0.07;_QI=223|1|1|1|0.83|0.71|7|320|292 |
| chr5_4 | exon | 61896697 | 61896802 | 61896697 | ID=Msa0862280-mRNA-1:exon:19282;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61896823 | 61897201 | 61896823 | ID=Msa0862280-mRNA-1:exon:19281;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61897428 | 61897511 | 61897428 | ID=Msa0862280-mRNA-1:exon:19280;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61897885 | 61897924 | 61897885 | ID=Msa0862280-mRNA-1:exon:19279;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61898461 | 61898557 | 61898461 | ID=Msa0862280-mRNA-1:exon:19278;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61898730 | 61898850 | 61898730 | ID=Msa0862280-mRNA-1:exon:19277;Parent=Msa0862280-mRNA-1 |
| chr5_4 | exon | 61899123 | 61899717 | 61899123 | ID=Msa0862280-mRNA-1:exon:19276;Parent=Msa0862280-mRNA-1 |
| chr5_4 | five_prime_UTR | 61899495 | 61899717 | 61899495 | ID=Msa0862280-mRNA-1:five_prime_utr;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61899123 | 61899494 | 61899123 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61898730 | 61898850 | 61898730 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61898461 | 61898557 | 61898461 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61897885 | 61897924 | 61897885 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61897428 | 61897511 | 61897428 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | CDS | 61897037 | 61897201 | 61897037 | ID=Msa0862280-mRNA-1:cds;Parent=Msa0862280-mRNA-1 |
| chr5_4 | three_prime_UTR | 61896823 | 61897036 | 61896823 | ID=Msa0862280-mRNA-1:three_prime_utr;Parent=Msa0862280-mRNA-1 |
| chr5_4 | three_prime_UTR | 61896697 | 61896802 | 61896697 | ID=Msa0862280-mRNA-1:three_prime_utr;Parent=Msa0862280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
