Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252050 | AET03420.2 | 86.927 | 895 | 65 | 4 | 3 | 867 | 1002 | 1874 | 0.0 | 1577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252050 | sp|F4I6V0|RAY1_ARATH | 56.425 | 537 | 197 | 8 | 128 | 641 | 1 | 523 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1252050 | -0.804408 | 2.191373e-49 | -8.615850e-47 |
| Msa0027020 | Msa1252050 | -0.804245 | 2.370039e-49 | -8.615850e-47 |
| Msa0693050 | Msa1252050 | -0.805558 | 1.259491e-49 | -8.615850e-47 |
| Msa0695250 | Msa1252050 | -0.805524 | 1.280401e-49 | -8.615850e-47 |
| Msa0713570 | Msa1252050 | -0.804836 | 1.783978e-49 | -8.615850e-47 |
| Msa0729740 | Msa1252050 | -0.811631 | 6.357661e-51 | -8.615850e-47 |
| Msa0751490 | Msa1252050 | -0.825367 | 4.873019e-54 | -8.615850e-47 |
| Msa0755550 | Msa1252050 | -0.804551 | 2.046222e-49 | -8.615850e-47 |
| Msa0162170 | Msa1252050 | -0.802189 | 6.314151e-49 | -8.615850e-47 |
| Msa0167570 | Msa1252050 | -0.802886 | 4.535527e-49 | -8.615850e-47 |
| Msa0195810 | Msa1252050 | -0.802614 | 5.160152e-49 | -8.615850e-47 |
| Msa1252050 | Msa1303690 | -0.801332 | 9.467250e-49 | -8.615850e-47 |
| Msa1252050 | Msa1325560 | -0.809601 | 1.745599e-50 | -8.615850e-47 |
| Msa1252050 | Msa1363170 | -0.801063 | 1.074596e-48 | -8.615850e-47 |
| Msa1252050 | Msa1395380 | -0.817474 | 3.236043e-52 | -8.615850e-47 |
| Msa1252050 | Msa1400830 | -0.808499 | 3.004893e-50 | -8.615850e-47 |
| Msa1252050 | Msa1415510 | -0.804427 | 2.171454e-49 | -8.615850e-47 |
| Msa1252050 | Msa1454300 | -0.819463 | 1.145968e-52 | -8.615850e-47 |
| Msa0382050 | Msa1252050 | -0.815423 | 9.314365e-52 | -8.615850e-47 |
| Msa0431270 | Msa1252050 | -0.806972 | 6.345087e-50 | -8.615850e-47 |
| Msa0431550 | Msa1252050 | -0.817692 | 2.890153e-52 | -8.615850e-47 |
| Msa0437820 | Msa1252050 | -0.803342 | 3.649383e-49 | -8.615850e-47 |
| Msa0444770 | Msa1252050 | -0.807820 | 4.194234e-50 | -8.615850e-47 |
| Msa0476560 | Msa1252050 | -0.813617 | 2.337484e-51 | -8.615850e-47 |
| Msa0476600 | Msa1252050 | -0.807427 | 5.080643e-50 | -8.615850e-47 |
| Msa1064240 | Msa1252050 | 0.808978 | 2.374395e-50 | -8.615850e-47 |
| Msa0255770 | Msa1252050 | -0.803000 | 4.296054e-49 | -8.615850e-47 |
| Msa1112190 | Msa1252050 | 0.802427 | 5.640442e-49 | -8.615850e-47 |
| Msa1154240 | Msa1252050 | 0.815778 | 7.765034e-52 | -8.615850e-47 |
| Msa0492330 | Msa1252050 | -0.816961 | 4.221292e-52 | -8.615850e-47 |
| Msa0945160 | Msa1252050 | -0.804255 | 2.357876e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252050 | MtrunA17_Chr8g0367951 | 93.604 | 641 | 41 | 0 | 1 | 641 | 1 | 641 | 0.0 | 1261 |
| Msa1252050 | MtrunA17_Chr8g0367941 | 92.063 | 252 | 17 | 2 | 630 | 880 | 7 | 256 | 5.97e-148 | 436 |
| Msa1252050 | MtrunA17_Chr8g0369811 | 26.738 | 187 | 116 | 3 | 347 | 515 | 63 | 246 | 4.60e-16 | 82.8 |
| Msa1252050 | MtrunA17_Chr5g0408171 | 26.772 | 127 | 90 | 1 | 389 | 515 | 114 | 237 | 3.61e-14 | 76.6 |
| Msa1252050 | MtrunA17_Chr5g0412731 | 39.416 | 137 | 62 | 5 | 751 | 880 | 24 | 146 | 1.40e-13 | 68.9 |
| Msa1252050 | MtrunA17_Chr1g0168191 | 25.664 | 226 | 144 | 7 | 361 | 567 | 46 | 266 | 5.22e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252050 | AT1G70630.7 | 53.028 | 677 | 263 | 12 | 1 | 641 | 3 | 660 | 0.0 | 682 |
| Msa1252050 | AT1G70630.6 | 53.028 | 677 | 263 | 12 | 1 | 641 | 72 | 729 | 0.0 | 680 |
| Msa1252050 | AT1G70630.3 | 53.028 | 677 | 263 | 12 | 1 | 641 | 82 | 739 | 0.0 | 680 |
| Msa1252050 | AT1G70630.4 | 50.000 | 674 | 257 | 12 | 1 | 641 | 82 | 708 | 0.0 | 629 |
| Msa1252050 | AT1G70630.2 | 56.425 | 537 | 197 | 8 | 128 | 641 | 1 | 523 | 0.0 | 600 |
| Msa1252050 | AT1G70630.1 | 56.425 | 537 | 197 | 8 | 128 | 641 | 1 | 523 | 0.0 | 600 |
| Msa1252050 | AT1G70630.5 | 52.622 | 534 | 191 | 8 | 128 | 641 | 1 | 492 | 0.0 | 549 |
| Msa1252050 | AT2G35610.1 | 27.559 | 127 | 89 | 1 | 389 | 515 | 130 | 253 | 1.05e-14 | 79.0 |
| Msa1252050 | AT1G56550.1 | 26.374 | 273 | 177 | 11 | 377 | 638 | 70 | 329 | 1.05e-11 | 68.2 |
| Msa1252050 | AT1G56550.2 | 26.374 | 273 | 177 | 11 | 377 | 638 | 70 | 329 | 1.53e-11 | 67.4 |
Find 164 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAAACAGTTATCCTTTC+TGG | 0.047928 | 8_2:-48815950 | Msa1252050:CDS |
| CTTTGGTCAATTTGGCTATC+TGG | 0.133466 | 8_2:-48816926 | Msa1252050:CDS |
| CCAGAAAGGATAACTGTTTC+AGG | 0.219157 | 8_2:+48815950 | None:intergenic |
| TTTACTGTCACATTTGTTTC+AGG | 0.219882 | 8_2:+48813778 | None:intergenic |
| TTTATTGAGCTTGAAAATTC+TGG | 0.236552 | 8_2:+48816838 | None:intergenic |
| CAAGTTTATAGACATGATTT+AGG | 0.238213 | 8_2:+48815915 | None:intergenic |
| TACATTGGTAATTCACATTT+AGG | 0.240530 | 8_2:-48815554 | Msa1252050:CDS |
| CTCCTCACCAATCTGTATTA+TGG | 0.240613 | 8_2:-48812786 | Msa1252050:CDS |
| TGAGGAGATTTGAAAACTTC+TGG | 0.247380 | 8_2:+48812802 | None:intergenic |
| GGTATGCGCCATTTGGAAAA+AGG | 0.251898 | 8_2:+48813740 | None:intergenic |
| GTTCTTCCACCTTTCATCTA+TGG | 0.260469 | 8_2:-48815731 | Msa1252050:CDS |
| CTAATATCACTTGGAGCTAT+TGG | 0.263876 | 8_2:+48814440 | None:intergenic |
| AGGAATAATTACCTTGTTCT+TGG | 0.269089 | 8_2:+48814225 | None:intergenic |
| AACAACAAAGTCCTTTGATT+TGG | 0.269718 | 8_2:+48812921 | None:intergenic |
| CAATAGCTCCAAGTGATATT+AGG | 0.277380 | 8_2:-48814439 | Msa1252050:CDS |
| TACCACCCCATTAGTCTCTT+TGG | 0.280565 | 8_2:+48812669 | None:intergenic |
| GGCAAGACAATATAGAAGTT+TGG | 0.283394 | 8_2:-48812377 | Msa1252050:CDS |
| AAAAGTGATTCTAAGGAAAA+TGG | 0.290215 | 8_2:+48815257 | None:intergenic |
| ATGTGGAGCTTTGGTCAATT+TGG | 0.291411 | 8_2:-48816934 | Msa1252050:CDS |
| CTTCTATATTGTCTTGCCTT+TGG | 0.306118 | 8_2:+48812382 | None:intergenic |
| CTTCAAACATGTTGCTTTGA+CGG | 0.307994 | 8_2:+48813696 | None:intergenic |
| GATAGACAAAAGTGATTCTA+AGG | 0.309781 | 8_2:+48815250 | None:intergenic |
| ATTCCCTTTCTTAACTCCTT+TGG | 0.315939 | 8_2:-48814281 | Msa1252050:CDS |
| TTACCAATTCTCCGTCTTGC+AGG | 0.317967 | 8_2:-48815093 | Msa1252050:intron |
| AGGCTATTTCATCTGAGTTC+AGG | 0.341722 | 8_2:-48815676 | Msa1252050:CDS |
| AGGCTTAGGAGTTGTGAATA+TGG | 0.345316 | 8_2:+48816781 | None:intergenic |
| GGTAAAATGAAAGAGTTAAA+TGG | 0.348963 | 8_2:-48812577 | Msa1252050:CDS |
| TCTATAAACTTGATCGTGAT+TGG | 0.355940 | 8_2:-48815904 | Msa1252050:CDS |
| AATCTGAATAATGCTACATT+TGG | 0.356988 | 8_2:-48815617 | Msa1252050:CDS |
| GCAAGACAATATAGAAGTTT+GGG | 0.360678 | 8_2:-48812376 | Msa1252050:CDS |
| AAGTTTATAGACATGATTTA+GGG | 0.360780 | 8_2:+48815916 | None:intergenic |
| GCAATCATAGAATGGAAATA+AGG | 0.363529 | 8_2:+48816016 | None:intergenic |
| ATCATGCCAAAGAGACTAAT+GGG | 0.368103 | 8_2:-48812675 | Msa1252050:CDS |
| GTTACATTATTCATAACAAT+TGG | 0.370627 | 8_2:-48813666 | Msa1252050:CDS |
| ACTTCACCTTTGTCACCCTT+TGG | 0.370791 | 8_2:+48814384 | None:intergenic |
| TCTTTGGCATGATCTTTCTC+TGG | 0.380988 | 8_2:+48812685 | None:intergenic |
| GTTCCAGTAGAGTCCATAAA+AGG | 0.386118 | 8_2:+48816761 | None:intergenic |
| AGTTGCTGGCTATAGCTATA+AGG | 0.386311 | 8_2:-48815195 | Msa1252050:CDS |
| TTTGGTCAATTTGGCTATCT+GGG | 0.386464 | 8_2:-48816925 | Msa1252050:CDS |
| AGGCATTTCATGTGGAGCTT+TGG | 0.389481 | 8_2:-48816943 | Msa1252050:CDS |
| GCTACATTTGGTAATTCAAC+TGG | 0.390744 | 8_2:-48815605 | Msa1252050:CDS |
| AGGAGTTAAGAAAGGGAATA+GGG | 0.391716 | 8_2:+48814285 | None:intergenic |
| AAACGTCTAGGTAGGTTTAT+TGG | 0.392517 | 8_2:+48813967 | None:intergenic |
| AGAAAATACGAAAACAGAAT+TGG | 0.395633 | 8_2:-48815829 | Msa1252050:CDS |
| ACTCTGCCTTGGTGTCCAAT+TGG | 0.404462 | 8_2:+48815419 | None:intergenic |
| TATTGTCTCTGCCCTTGATC+AGG | 0.414327 | 8_2:-48815120 | Msa1252050:CDS |
| GATCATGCCAAAGAGACTAA+TGG | 0.417411 | 8_2:-48812676 | Msa1252050:CDS |
| TATTGTCTTGCCTTTGGAAA+AGG | 0.419798 | 8_2:+48812388 | None:intergenic |
| TAGATATTGAAAATAAAGAC+TGG | 0.421394 | 8_2:-48815580 | Msa1252050:CDS |
| AGGTTTGATGACTGCCACTT+TGG | 0.421609 | 8_2:-48814419 | Msa1252050:CDS |
| ACAATTGTACTAACAGTTGC+TGG | 0.421661 | 8_2:-48815209 | Msa1252050:CDS |
| GGTTTGTGTTTGATGCTAGT+TGG | 0.422469 | 8_2:-48815655 | Msa1252050:CDS |
| CTTCTTTCCATAATACAGAT+TGG | 0.424016 | 8_2:+48812779 | None:intergenic |
| AACGACACGCCTCTACATAA+TGG | 0.424801 | 8_2:-48815755 | Msa1252050:CDS |
| GTGAAACATGCAGAAACTTC+AGG | 0.428196 | 8_2:-48813883 | Msa1252050:CDS |
| TTTGTCATCAACGTGTAAAC+AGG | 0.431575 | 8_2:+48812850 | None:intergenic |
| AAGGAGTTAAGAAAGGGAAT+AGG | 0.431859 | 8_2:+48814284 | None:intergenic |
| TTAGTGATGTGGATACATAT+TGG | 0.434572 | 8_2:-48814316 | Msa1252050:CDS |
| CCGAACAGCAAGCGTCTGTC+TGG | 0.442586 | 8_2:+48816739 | None:intergenic |
| TCACATTTAGGACAACACTA+TGG | 0.445062 | 8_2:-48815542 | Msa1252050:CDS |
| TCATCAAGTTCACTCTGCCT+TGG | 0.447461 | 8_2:+48815408 | None:intergenic |
| TTCTGTTTGTGTCCACTACT+AGG | 0.447700 | 8_2:+48812607 | None:intergenic |
| TAAGGATATGCTAATGAGTT+GGG | 0.450109 | 8_2:-48815177 | Msa1252050:CDS |
| ATTGGTAAGTTTCCTGATCA+AGG | 0.450313 | 8_2:+48815108 | None:intergenic |
| ATACCTGCAAGACGGAGAAT+TGG | 0.456110 | 8_2:+48815090 | None:intergenic |
| GTAGAGTCCATAAAAGGCTT+AGG | 0.461582 | 8_2:+48816767 | None:intergenic |
| ATCAAAAGAACTTGCAAATG+AGG | 0.467533 | 8_2:+48816655 | None:intergenic |
| CCACCTTTCATCTATGGTAA+AGG | 0.468488 | 8_2:-48815725 | Msa1252050:CDS |
| TATGACATATTATGTGGAAA+AGG | 0.469899 | 8_2:-48813838 | Msa1252050:CDS |
| GAAATCAATGACAAGAATGT+TGG | 0.476920 | 8_2:-48815327 | Msa1252050:CDS |
| TTTGATTTGGAACTGAATTG+AGG | 0.478713 | 8_2:+48812934 | None:intergenic |
| GTGTGATCCTTGTTGATTGA+AGG | 0.483460 | 8_2:+48816860 | None:intergenic |
| ATGTTTCACCACTTTATCTA+CGG | 0.483649 | 8_2:+48813897 | None:intergenic |
| AATGTTGGATTGCTCTCTAA+AGG | 0.484126 | 8_2:-48815312 | Msa1252050:CDS |
| CTACCTAGACGTTTGAACTC+TGG | 0.489024 | 8_2:-48813958 | Msa1252050:CDS |
| AACAAAACAATAGTAACATA+AGG | 0.489200 | 8_2:+48816698 | None:intergenic |
| ATAAGGATATGCTAATGAGT+TGG | 0.493658 | 8_2:-48815178 | Msa1252050:CDS |
| CCAGACAGACGCTTGCTGTT+CGG | 0.496000 | 8_2:-48816739 | Msa1252050:CDS |
| TCCTTCACAGCTGGAAGACT+AGG | 0.503738 | 8_2:+48812346 | None:intergenic |
| AAAGCAACATGTTTGAAGAA+AGG | 0.505025 | 8_2:-48813691 | Msa1252050:CDS |
| AGACGCTTGCTGTTCGGTCA+TGG | 0.506650 | 8_2:-48816733 | Msa1252050:CDS |
| CATAATATGTCATAGAAGCT+TGG | 0.511277 | 8_2:+48813847 | None:intergenic |
| AAATGGTGTTGTAGAGGGAA+TGG | 0.511335 | 8_2:-48812560 | Msa1252050:CDS |
| AGCTTCTATGACATATTATG+TGG | 0.514261 | 8_2:-48813844 | Msa1252050:CDS |
| GTTGTTAAAATAGCTCATGC+AGG | 0.520223 | 8_2:-48812904 | Msa1252050:CDS |
| GACTCGAAAAGTAAGAAGAA+AGG | 0.521355 | 8_2:-48812979 | Msa1252050:CDS |
| GGAGAGAGTTCCTTCACAGC+TGG | 0.524793 | 8_2:+48812337 | None:intergenic |
| TAACGCAGAAAGAATGATCA+TGG | 0.528503 | 8_2:-48815789 | Msa1252050:CDS |
| AGGAAACATCAAGGGATACA+AGG | 0.530913 | 8_2:-48812959 | Msa1252050:CDS |
| TCAATTCAGTTCCAAATCAA+AGG | 0.531474 | 8_2:-48812932 | Msa1252050:CDS |
| ACCTAGTCTTCCAGCTGTGA+AGG | 0.533240 | 8_2:-48812347 | Msa1252050:CDS |
| ACGATGACAAATATGTCTGA+TGG | 0.539312 | 8_2:+48815977 | None:intergenic |
| CGATGACAAATATGTCTGAT+GGG | 0.539447 | 8_2:+48815978 | None:intergenic |
| AATTGCAGCCGTAGATAAAG+TGG | 0.541060 | 8_2:-48813905 | Msa1252050:CDS |
| TAAGAAGAAAGGAAACATCA+AGG | 0.542149 | 8_2:-48812968 | Msa1252050:CDS |
| TCTCTTTGAAAGACGTTGAG+AGG | 0.542302 | 8_2:-48812723 | Msa1252050:CDS |
| TTTGTTATCACCGACACGGT+TGG | 0.543000 | 8_2:+48813810 | None:intergenic |
| TGTTGTAGAGGGAATGGAAG+TGG | 0.543273 | 8_2:-48812554 | Msa1252050:CDS |
| TCGCATCAAACATGACATAA+CGG | 0.543401 | 8_2:+48815459 | None:intergenic |
| TGGAACAAAGTGTTTCCAAA+GGG | 0.545488 | 8_2:-48814399 | Msa1252050:CDS |
| ATGGCCAAAGGAGTTAAGAA+AGG | 0.548648 | 8_2:+48814277 | None:intergenic |
| AAAGAACTTCTATAATCCTA+AGG | 0.548740 | 8_2:-48812470 | Msa1252050:CDS |
| ATGAATGAATATGTAGTGGA+AGG | 0.548753 | 8_2:-48812523 | Msa1252050:CDS |
| ATGAGGCAACAGAAGGGTGT+TGG | 0.551946 | 8_2:+48816672 | None:intergenic |
| TTTATAGACATGATTTAGGG+TGG | 0.552199 | 8_2:+48815919 | None:intergenic |
| ATTCAGATTGAAACTTGTGA+TGG | 0.554665 | 8_2:+48815631 | None:intergenic |
| CTTGCAAATGAGGCAACAGA+AGG | 0.557432 | 8_2:+48816665 | None:intergenic |
| TGGCCAAAGGAGTTAAGAAA+GGG | 0.558670 | 8_2:+48814278 | None:intergenic |
| GGAAAATGGAAGCTCTAAAG+AGG | 0.560312 | 8_2:+48815271 | None:intergenic |
| GACAATATAGAAGTTTGGGA+TGG | 0.561454 | 8_2:-48812372 | Msa1252050:CDS |
| GGACACAAACAGAAAGAGAA+TGG | 0.561973 | 8_2:-48812598 | Msa1252050:CDS |
| ATTCATAACAATTGGATCAG+TGG | 0.563433 | 8_2:-48813658 | Msa1252050:CDS |
| TTGGTAAGTTTCCTGATCAA+GGG | 0.566708 | 8_2:+48815109 | None:intergenic |
| AGAGTTAAATGGTGTTGTAG+AGG | 0.567470 | 8_2:-48812566 | Msa1252050:CDS |
| TTGTGAATATGGTAATGCTA+AGG | 0.568072 | 8_2:+48816792 | None:intergenic |
| TGATTAACAGGCATTTCATG+TGG | 0.568579 | 8_2:-48816951 | Msa1252050:intron |
| GTGATTTCGCAATCATAGAA+TGG | 0.569906 | 8_2:+48816008 | None:intergenic |
| TACGAAAACAGAATTGGCAG+TGG | 0.573555 | 8_2:-48815823 | Msa1252050:CDS |
| AGGCAGAGTGAACTTGATGA+AGG | 0.577081 | 8_2:-48815405 | Msa1252050:CDS |
| CAGAGTTCAAACGTCTAGGT+AGG | 0.578485 | 8_2:+48813959 | None:intergenic |
| CAATGTAATACTTAGTGATG+TGG | 0.582785 | 8_2:-48814327 | Msa1252050:CDS |
| GTGTTTCCAAAGGGTGACAA+AGG | 0.582965 | 8_2:-48814390 | Msa1252050:CDS |
| AAGCCAGAGTTCAAACGTCT+AGG | 0.584928 | 8_2:+48813955 | None:intergenic |
| AAATCGAAGTCTCCTAGTAG+TGG | 0.585196 | 8_2:-48812619 | Msa1252050:CDS |
| AAAGATGAATGAATATGTAG+TGG | 0.586006 | 8_2:-48812527 | Msa1252050:CDS |
| GACATATTATGTGGAAAAGG+AGG | 0.587778 | 8_2:-48813835 | Msa1252050:CDS |
| TTGGAACAAAGTGTTTCCAA+AGG | 0.588532 | 8_2:-48814400 | Msa1252050:CDS |
| TGTCTTGCCTTTGGAAAAGG+CGG | 0.590703 | 8_2:+48812391 | None:intergenic |
| GTAAAGGTACACATAACAGT+TGG | 0.590765 | 8_2:-48815709 | Msa1252050:CDS |
| GGACTTGCGATACACATACC+TGG | 0.591011 | 8_2:+48812823 | None:intergenic |
| AATAAAGACTGGGAATACAT+TGG | 0.592701 | 8_2:-48815569 | Msa1252050:CDS |
| TCATCAAACCTAATATCACT+TGG | 0.593549 | 8_2:+48814431 | None:intergenic |
| TGCTTACGTGAAATCGATGT+CGG | 0.597117 | 8_2:+48816610 | None:intergenic |
| GAGTTAAATGGTGTTGTAGA+GGG | 0.597408 | 8_2:-48812565 | Msa1252050:CDS |
| TTCCATAATACAGATTGGTG+AGG | 0.599268 | 8_2:+48812784 | None:intergenic |
| AGATATTGAAAATAAAGACT+GGG | 0.600590 | 8_2:-48815579 | Msa1252050:CDS |
| AACAAGAACTGCATGGCCAA+AGG | 0.607752 | 8_2:+48814265 | None:intergenic |
| AAGAAGAAAGGAAACATCAA+GGG | 0.609453 | 8_2:-48812967 | Msa1252050:CDS |
| AATGGAAATAAGGACTGCCA+AGG | 0.610820 | 8_2:+48816026 | None:intergenic |
| CAGAAAGAATGATCATGGCA+TGG | 0.611026 | 8_2:-48815784 | Msa1252050:CDS |
| CCTTTACCATAGATGAAAGG+TGG | 0.612065 | 8_2:+48815725 | None:intergenic |
| ATAACAATTGGATCAGTGGA+AGG | 0.614334 | 8_2:-48813654 | Msa1252050:CDS |
| GGGTGGAGATGAATCCAGAA+AGG | 0.616950 | 8_2:+48815936 | None:intergenic |
| ACGTTGATGACAAAGTATCC+AGG | 0.617133 | 8_2:-48812841 | Msa1252050:CDS |
| GTCTATCCAATTGGACACCA+AGG | 0.625207 | 8_2:-48815425 | Msa1252050:CDS |
| GGAAACACTTTGTTCCAAAG+TGG | 0.632001 | 8_2:+48814405 | None:intergenic |
| GACATTTGTTATCACCGACA+CGG | 0.637412 | 8_2:+48813806 | None:intergenic |
| TAACAGTTGGATAATTCATG+AGG | 0.642939 | 8_2:-48815696 | Msa1252050:CDS |
| GGAAGAACTCCATTATGTAG+AGG | 0.645406 | 8_2:+48815746 | None:intergenic |
| GACAGAACATACCTGCAAGA+CGG | 0.647574 | 8_2:+48815082 | None:intergenic |
| GTACCTTTACCATAGATGAA+AGG | 0.648041 | 8_2:+48815722 | None:intergenic |
| GTTAAAATAGCTCATGCAGG+TGG | 0.650278 | 8_2:-48812901 | Msa1252050:CDS |
| AAAGGAGGATCCAACCGTGT+CGG | 0.656581 | 8_2:-48813820 | Msa1252050:CDS |
| TGCCAAAGAGACTAATGGGG+TGG | 0.661726 | 8_2:-48812671 | Msa1252050:CDS |
| TTGCAAATGAGGCAACAGAA+GGG | 0.667099 | 8_2:+48816666 | None:intergenic |
| ATTAAGATATACTTGTGACC+AGG | 0.670764 | 8_2:+48812745 | None:intergenic |
| TGTCGGTATCAACTGAAACC+CGG | 0.671642 | 8_2:+48816627 | None:intergenic |
| TCTGATGAATACCAAGAACA+AGG | 0.675366 | 8_2:-48814236 | Msa1252050:intron |
| GGTATCAACTGAAACCCGGC+CGG | 0.682019 | 8_2:+48816631 | None:intergenic |
| AAGATTACCTTCAATCAACA+AGG | 0.682780 | 8_2:-48816867 | Msa1252050:CDS |
| ATGGCGCATACCAAAACCTG+TGG | 0.684499 | 8_2:-48813729 | Msa1252050:CDS |
| ACAAGATGTTTATAGACACG+CGG | 0.705017 | 8_2:-48812875 | Msa1252050:CDS |
| TCATGCCAAAGAGACTAATG+GGG | 0.736446 | 8_2:-48812674 | Msa1252050:CDS |
| ATTGTGCAACAAGAACTGCA+TGG | 0.740468 | 8_2:+48814258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGTACTATATAAAAAT+TGG | - | chr8_2:48813104-48813123 | Msa1252050:intron | 10.0% |
| !!! | ATCTTAATATTTTTTTGTAT+AGG | + | chr8_2:48814811-48814830 | None:intergenic | 10.0% |
| !! | AGAAATATTAAATCATAATA+CGG | - | chr8_2:48816193-48816212 | Msa1252050:intron | 10.0% |
| !! | AATTATCATGATTTACATAA+AGG | - | chr8_2:48814612-48814631 | Msa1252050:intron | 15.0% |
| !! | AACAAAACAATAGTAACATA+AGG | + | chr8_2:48812684-48812703 | None:intergenic | 20.0% |
| !!! | TCTATCATAGTTCTAAATTA+TGG | + | chr8_2:48812999-48813018 | None:intergenic | 20.0% |
| !! | CGATTTAGTACTAAATAAAT+TGG | - | chr8_2:48813037-48813056 | Msa1252050:CDS | 20.0% |
| !! | TTTAGTACTAAATAAATTGG+TGG | - | chr8_2:48813040-48813059 | Msa1252050:intron | 20.0% |
| !! | TAAAAATTGGTTAAGACTAA+AGG | - | chr8_2:48813117-48813136 | Msa1252050:intron | 20.0% |
| !!! | ATTCTGATTTTGTATGTATT+AGG | - | chr8_2:48813202-48813221 | Msa1252050:intron | 20.0% |
| !!! | TACTATTGTTTTACATACAT+AGG | + | chr8_2:48813238-48813257 | None:intergenic | 20.0% |
| !! | TGGATAAACAAAATATAGAT+TGG | + | chr8_2:48813329-48813348 | None:intergenic | 20.0% |
| !! | AAGTTTATAGACATGATTTA+GGG | + | chr8_2:48813466-48813485 | None:intergenic | 20.0% |
| !! | TAGATATTGAAAATAAAGAC+TGG | - | chr8_2:48813799-48813818 | Msa1252050:CDS | 20.0% |
| !! | AGATATTGAAAATAAAGACT+GGG | - | chr8_2:48813800-48813819 | Msa1252050:CDS | 20.0% |
| !!! | AGAGACAATAAAATTTTCAA+TGG | + | chr8_2:48814249-48814268 | None:intergenic | 20.0% |
| !! | AAAATACCTAGTTATTTGAT+TGG | - | chr8_2:48814445-48814464 | Msa1252050:CDS | 20.0% |
| !! | TTGTAAGTGAAATAGTTTAA+AGG | - | chr8_2:48814484-48814503 | Msa1252050:intron | 20.0% |
| !! | ATATTACCTGCATATATAAA+GGG | + | chr8_2:48814553-48814572 | None:intergenic | 20.0% |
| !! | TATATTACCTGCATATATAA+AGG | + | chr8_2:48814554-48814573 | None:intergenic | 20.0% |
| !! | GTTACATTATTCATAACAAT+TGG | - | chr8_2:48815713-48815732 | Msa1252050:CDS | 20.0% |
| !!! | AATCAGTTTTAAACTATCTT+TGG | - | chr8_2:48815943-48815962 | Msa1252050:CDS | 20.0% |
| !! | AACAAAAATTCTTCATAGAA+TGG | + | chr8_2:48816085-48816104 | None:intergenic | 20.0% |
| !! | GAATTATTCTTAGTATACTA+TGG | + | chr8_2:48816223-48816242 | None:intergenic | 20.0% |
| ! | ACAATGAAGAATGCATATAA+GGG | + | chr8_2:48812358-48812377 | None:intergenic | 25.0% |
| ! | ATGTTACGAAAATGAAAACA+AGG | + | chr8_2:48812391-48812410 | None:intergenic | 25.0% |
| !! | TTTTCTTGCATTTGATTAAC+AGG | - | chr8_2:48812416-48812435 | Msa1252050:CDS | 25.0% |
| ! | TTTATTGAGCTTGAAAATTC+TGG | + | chr8_2:48812544-48812563 | None:intergenic | 25.0% |
| !! | GCTCAATAAAAATGATGTTT+TGG | - | chr8_2:48812554-48812573 | Msa1252050:CDS | 25.0% |
| !! | TGTAATTTTCCACAATAACA+AGG | + | chr8_2:48812883-48812902 | None:intergenic | 25.0% |
| !!! | CTTTTAAGAATACACCAATT+TGG | - | chr8_2:48813067-48813086 | Msa1252050:intron | 25.0% |
| ! | ACATACAAAATCAGAATCAT+TGG | + | chr8_2:48813199-48813218 | None:intergenic | 25.0% |
| !! | TGATTTTGTATGTATTAGGT+AGG | - | chr8_2:48813206-48813225 | Msa1252050:intron | 25.0% |
| ! | TGTAAAACAATAGTACATTG+TGG | - | chr8_2:48813243-48813262 | Msa1252050:intron | 25.0% |
| ! | CAAGTTTATAGACATGATTT+AGG | + | chr8_2:48813467-48813486 | None:intergenic | 25.0% |
| ! | AGAAAATACGAAAACAGAAT+TGG | - | chr8_2:48813550-48813569 | Msa1252050:intron | 25.0% |
| ! | AATCTGAATAATGCTACATT+TGG | - | chr8_2:48813762-48813781 | Msa1252050:CDS | 25.0% |
| !! | TACATTGGTAATTCACATTT+AGG | - | chr8_2:48813825-48813844 | Msa1252050:CDS | 25.0% |
| !! | TTTTCACAAGTCAAAAGTTT+TGG | + | chr8_2:48813900-48813919 | None:intergenic | 25.0% |
| !! | AAAAGTGATTCTAAGGAAAA+TGG | + | chr8_2:48814125-48814144 | None:intergenic | 25.0% |
| ! | TATAGAGAAAACAGACAAAT+GGG | + | chr8_2:48814384-48814403 | None:intergenic | 25.0% |
| ! | TTATAGAGAAAACAGACAAA+TGG | + | chr8_2:48814385-48814404 | None:intergenic | 25.0% |
| ! | ATCTATCCAATCAAATAACT+AGG | + | chr8_2:48814454-48814473 | None:intergenic | 25.0% |
| ! | AAGTGAAATAGTTTAAAGGA+AGG | - | chr8_2:48814488-48814507 | Msa1252050:intron | 25.0% |
| ! | AGTGAAATAGTTTAAAGGAA+GGG | - | chr8_2:48814489-48814508 | Msa1252050:intron | 25.0% |
| ! | TATTACCTGCATATATAAAG+GGG | + | chr8_2:48814552-48814571 | None:intergenic | 25.0% |
| ! | ACATAAAGGAAATAAAGTGT+AGG | - | chr8_2:48814626-48814645 | Msa1252050:intron | 25.0% |
| ! | TTCTCTCTATTTGAACAAAA+AGG | + | chr8_2:48814694-48814713 | None:intergenic | 25.0% |
| !! | ACATATACACTTTTCTTTAG+TGG | + | chr8_2:48815321-48815340 | None:intergenic | 25.0% |
| ! | TATGACATATTATGTGGAAA+AGG | - | chr8_2:48815541-48815560 | Msa1252050:CDS | 25.0% |
| ! | CAAAATTAACTTCATGGTTT+GGG | + | chr8_2:48816037-48816056 | None:intergenic | 25.0% |
| ! | TCAAAATTAACTTCATGGTT+TGG | + | chr8_2:48816038-48816057 | None:intergenic | 25.0% |
| !! | AAACCATGAAGTTAATTTTG+AGG | - | chr8_2:48816037-48816056 | Msa1252050:intron | 25.0% |
| ! | TTTCCTCAAAATTAACTTCA+TGG | + | chr8_2:48816043-48816062 | None:intergenic | 25.0% |
| ! | ATATTAAATCATAATACGGC+CGG | - | chr8_2:48816197-48816216 | Msa1252050:intron | 25.0% |
| ! | TTTCATCATATTCTATCAGA+AGG | + | chr8_2:48816294-48816313 | None:intergenic | 25.0% |
| ! | ATTGTATAACTTTGAATTGC+AGG | - | chr8_2:48816321-48816340 | Msa1252050:intron | 25.0% |
| ! | GGTAAAATGAAAGAGTTAAA+TGG | - | chr8_2:48816802-48816821 | Msa1252050:CDS | 25.0% |
| ! | AAAGATGAATGAATATGTAG+TGG | - | chr8_2:48816852-48816871 | Msa1252050:CDS | 25.0% |
| ! | AAAGAACTTCTATAATCCTA+AGG | - | chr8_2:48816909-48816928 | Msa1252050:CDS | 25.0% |
| GACAATGAAGAATGCATATA+AGG | + | chr8_2:48812359-48812378 | None:intergenic | 30.0% | |
| AAGATTACCTTCAATCAACA+AGG | - | chr8_2:48812512-48812531 | Msa1252050:CDS | 30.0% | |
| ! | TTGTGAATATGGTAATGCTA+AGG | + | chr8_2:48812590-48812609 | None:intergenic | 30.0% |
| ATCAAAAGAACTTGCAAATG+AGG | + | chr8_2:48812727-48812746 | None:intergenic | 30.0% | |
| ! | TTTGCAAGTTCTTTTGATAC+CGG | - | chr8_2:48812729-48812748 | Msa1252050:CDS | 30.0% |
| GGTGTTCATTATGAAAATCA+CGG | - | chr8_2:48812820-48812839 | Msa1252050:CDS | 30.0% | |
| TGGAAAATTACAGACAAATG+CGG | - | chr8_2:48812891-48812910 | Msa1252050:CDS | 30.0% | |
| TGTGCATTCAAAATCCAAAT+TGG | + | chr8_2:48813084-48813103 | None:intergenic | 30.0% | |
| ! | AGTACATTGTGGTGAATTTT+TGG | - | chr8_2:48813254-48813273 | Msa1252050:intron | 30.0% |
| !!! | TTGTGGTGAATTTTTGGTAT+TGG | - | chr8_2:48813260-48813279 | Msa1252050:intron | 30.0% |
| GCAATCATAGAATGGAAATA+AGG | + | chr8_2:48813366-48813385 | None:intergenic | 30.0% | |
| TTTATAGACATGATTTAGGG+TGG | + | chr8_2:48813463-48813482 | None:intergenic | 30.0% | |
| TCTATAAACTTGATCGTGAT+TGG | - | chr8_2:48813475-48813494 | Msa1252050:intron | 30.0% | |
| TAACAGTTGGATAATTCATG+AGG | - | chr8_2:48813683-48813702 | Msa1252050:CDS | 30.0% | |
| ATTCAGATTGAAACTTGTGA+TGG | + | chr8_2:48813751-48813770 | None:intergenic | 30.0% | |
| AATAAAGACTGGGAATACAT+TGG | - | chr8_2:48813810-48813829 | Msa1252050:CDS | 30.0% | |
| AAAAACGTTGTCTATCCAAT+TGG | - | chr8_2:48813945-48813964 | Msa1252050:CDS | 30.0% | |
| GAAATCAATGACAAGAATGT+TGG | - | chr8_2:48814052-48814071 | Msa1252050:intron | 30.0% | |
| GATAGACAAAAGTGATTCTA+AGG | + | chr8_2:48814132-48814151 | None:intergenic | 30.0% | |
| ATAAGGATATGCTAATGAGT+TGG | - | chr8_2:48814201-48814220 | Msa1252050:intron | 30.0% | |
| TAAGGATATGCTAATGAGTT+GGG | - | chr8_2:48814202-48814221 | Msa1252050:intron | 30.0% | |
| ! | GATTATTTAGAATTTGCGTG+CGG | - | chr8_2:48814357-48814376 | Msa1252050:CDS | 30.0% |
| ! | ATTATTTAGAATTTGCGTGC+GGG | - | chr8_2:48814358-48814377 | Msa1252050:CDS | 30.0% |
| !! | AAAAGTGCTATACCAAAACT+TGG | - | chr8_2:48814523-48814542 | Msa1252050:intron | 30.0% |
| ! | TTGATTTGATCTCTCAATAG+TGG | + | chr8_2:48814665-48814684 | None:intergenic | 30.0% |
| TCATCAAACCTAATATCACT+TGG | + | chr8_2:48814951-48814970 | None:intergenic | 30.0% | |
| CAATGTAATACTTAGTGATG+TGG | - | chr8_2:48815052-48815071 | Msa1252050:intron | 30.0% | |
| TTAGTGATGTGGATACATAT+TGG | - | chr8_2:48815063-48815082 | Msa1252050:intron | 30.0% | |
| AGGAATAATTACCTTGTTCT+TGG | + | chr8_2:48815157-48815176 | None:intergenic | 30.0% | |
| TGCACAGAAAATTTGCAAAA+AGG | + | chr8_2:48815389-48815408 | None:intergenic | 30.0% | |
| ! | TTTTTGCAAATTTTCTGTGC+AGG | - | chr8_2:48815388-48815407 | Msa1252050:CDS | 30.0% |
| ATGTTTCACCACTTTATCTA+CGG | + | chr8_2:48815485-48815504 | None:intergenic | 30.0% | |
| CATAATATGTCATAGAAGCT+TGG | + | chr8_2:48815535-48815554 | None:intergenic | 30.0% | |
| AGCTTCTATGACATATTATG+TGG | - | chr8_2:48815535-48815554 | Msa1252050:CDS | 30.0% | |
| TTTACTGTCACATTTGTTTC+AGG | + | chr8_2:48815604-48815623 | None:intergenic | 30.0% | |
| AAAGCAACATGTTTGAAGAA+AGG | - | chr8_2:48815688-48815707 | Msa1252050:CDS | 30.0% | |
| ATTCATAACAATTGGATCAG+TGG | - | chr8_2:48815721-48815740 | Msa1252050:CDS | 30.0% | |
| ACCGTTCAATCTCAAATTAA+CGG | + | chr8_2:48815969-48815988 | None:intergenic | 30.0% | |
| TCTTCATAGAATGGATAAGA+AGG | + | chr8_2:48816076-48816095 | None:intergenic | 30.0% | |
| TATTCTTAGTATACTATGGC+CGG | + | chr8_2:48816219-48816238 | None:intergenic | 30.0% | |
| TTCTATCAGAAGGATATGTT+AGG | + | chr8_2:48816284-48816303 | None:intergenic | 30.0% | |
| TAAGAAGAAAGGAAACATCA+AGG | - | chr8_2:48816411-48816430 | Msa1252050:intron | 30.0% | |
| AAGAAGAAAGGAAACATCAA+GGG | - | chr8_2:48816412-48816431 | Msa1252050:intron | 30.0% | |
| !! | TTTGATTTGGAACTGAATTG+AGG | + | chr8_2:48816448-48816467 | None:intergenic | 30.0% |
| TCAATTCAGTTCCAAATCAA+AGG | - | chr8_2:48816447-48816466 | Msa1252050:intron | 30.0% | |
| AACAACAAAGTCCTTTGATT+TGG | + | chr8_2:48816461-48816480 | None:intergenic | 30.0% | |
| CTTCTTTCCATAATACAGAT+TGG | + | chr8_2:48816603-48816622 | None:intergenic | 30.0% | |
| ATTAAGATATACTTGTGACC+AGG | + | chr8_2:48816637-48816656 | None:intergenic | 30.0% | |
| GAAAAAGAGAATCTTCATCT+TGG | - | chr8_2:48816733-48816752 | Msa1252050:CDS | 30.0% | |
| ! | ATGAATGAATATGTAGTGGA+AGG | - | chr8_2:48816856-48816875 | Msa1252050:CDS | 30.0% |
| !! | CTTTTTCTTGAAGGTTTTGT+TGG | + | chr8_2:48816940-48816959 | None:intergenic | 30.0% |
| ACAAAACCTTCAAGAAAAAG+AGG | - | chr8_2:48816940-48816959 | Msa1252050:CDS | 30.0% | |
| GCAAGACAATATAGAAGTTT+GGG | - | chr8_2:48817003-48817022 | Msa1252050:intron | 30.0% | |
| TGATTAACAGGCATTTCATG+TGG | - | chr8_2:48812428-48812447 | Msa1252050:CDS | 35.0% | |
| TTTGGTCAATTTGGCTATCT+GGG | - | chr8_2:48812454-48812473 | Msa1252050:CDS | 35.0% | |
| TAATGAACACCAACTCATGA+AGG | + | chr8_2:48812811-48812830 | None:intergenic | 35.0% | |
| !! | CATTGCAAACCTTGTTATTG+TGG | - | chr8_2:48812871-48812890 | Msa1252050:CDS | 35.0% |
| AAATGCAATTACGGTTGCAT+TGG | + | chr8_2:48812917-48812936 | None:intergenic | 35.0% | |
| CAACATCGCAAATGCAATTA+CGG | + | chr8_2:48812926-48812945 | None:intergenic | 35.0% | |
| ! | GTTACACCTGATGATGTAAA+AGG | - | chr8_2:48813282-48813301 | Msa1252050:intron | 35.0% |
| ! | GTTTCTCCTTTTACATCATC+AGG | + | chr8_2:48813291-48813310 | None:intergenic | 35.0% |
| !! | TTTTGTTTATCCAGCTTCCT+TGG | - | chr8_2:48813336-48813355 | Msa1252050:intron | 35.0% |
| GTGATTTCGCAATCATAGAA+TGG | + | chr8_2:48813374-48813393 | None:intergenic | 35.0% | |
| CGATGACAAATATGTCTGAT+GGG | + | chr8_2:48813404-48813423 | None:intergenic | 35.0% | |
| ACGATGACAAATATGTCTGA+TGG | + | chr8_2:48813405-48813424 | None:intergenic | 35.0% | |
| ! | TTTTGAGCTGAAGAATTCTG+AGG | + | chr8_2:48813516-48813535 | None:intergenic | 35.0% |
| TAACGCAGAAAGAATGATCA+TGG | - | chr8_2:48813590-48813609 | Msa1252050:intron | 35.0% | |
| GTACCTTTACCATAGATGAA+AGG | + | chr8_2:48813660-48813679 | None:intergenic | 35.0% | |
| ! | GTAAAGGTACACATAACAGT+TGG | - | chr8_2:48813670-48813689 | Msa1252050:CDS | 35.0% |
| ! | GCTACATTTGGTAATTCAAC+TGG | - | chr8_2:48813774-48813793 | Msa1252050:CDS | 35.0% |
| ! | TCACATTTAGGACAACACTA+TGG | - | chr8_2:48813837-48813856 | Msa1252050:CDS | 35.0% |
| !! | CACAAGTCAAAAGTTTTGGT+AGG | + | chr8_2:48813896-48813915 | None:intergenic | 35.0% |
| TCGCATCAAACATGACATAA+CGG | + | chr8_2:48813923-48813942 | None:intergenic | 35.0% | |
| !! | AGGAAAAGCTTTTTCCTTCT+AGG | - | chr8_2:48813994-48814013 | Msa1252050:intron | 35.0% |
| !! | GCTTTTTCCTTCTAGGTTAA+AGG | - | chr8_2:48814001-48814020 | Msa1252050:intron | 35.0% |
| ! | GCATTTTCCTTTAACCTAGA+AGG | + | chr8_2:48814011-48814030 | None:intergenic | 35.0% |
| AATGTTGGATTGCTCTCTAA+AGG | - | chr8_2:48814067-48814086 | Msa1252050:intron | 35.0% | |
| ACAATTGTACTAACAGTTGC+TGG | - | chr8_2:48814170-48814189 | Msa1252050:intron | 35.0% | |
| TTGGTAAGTTTCCTGATCAA+GGG | + | chr8_2:48814273-48814292 | None:intergenic | 35.0% | |
| ATTGGTAAGTTTCCTGATCA+AGG | + | chr8_2:48814274-48814293 | None:intergenic | 35.0% | |
| ! | GTTTAAAGGAAGGGTATAAC+TGG | - | chr8_2:48814498-48814517 | Msa1252050:intron | 35.0% |
| TGTTGTATAGTTCAGACACT+CGG | + | chr8_2:48814739-48814758 | None:intergenic | 35.0% | |
| TCTTGTCACACTCCTTAATA+TGG | - | chr8_2:48814892-48814911 | Msa1252050:intron | 35.0% | |
| GCTATTGGATCTGTAAAAAC+TGG | + | chr8_2:48814927-48814946 | None:intergenic | 35.0% | |
| CTAATATCACTTGGAGCTAT+TGG | + | chr8_2:48814942-48814961 | None:intergenic | 35.0% | |
| CAATAGCTCCAAGTGATATT+AGG | - | chr8_2:48814940-48814959 | Msa1252050:intron | 35.0% | |
| ! | TTGGAACAAAGTGTTTCCAA+AGG | - | chr8_2:48814979-48814998 | Msa1252050:intron | 35.0% |
| ! | TGGAACAAAGTGTTTCCAAA+GGG | - | chr8_2:48814980-48814999 | Msa1252050:intron | 35.0% |
| !!! | GTTTTGAAGATACTCAAGCT+AGG | - | chr8_2:48815026-48815045 | Msa1252050:intron | 35.0% |
| AGGAGTTAAGAAAGGGAATA+GGG | + | chr8_2:48815097-48815116 | None:intergenic | 35.0% | |
| AAGGAGTTAAGAAAGGGAAT+AGG | + | chr8_2:48815098-48815117 | None:intergenic | 35.0% | |
| ATTCCCTTTCTTAACTCCTT+TGG | - | chr8_2:48815098-48815117 | Msa1252050:CDS | 35.0% | |
| TCTGATGAATACCAAGAACA+AGG | - | chr8_2:48815143-48815162 | Msa1252050:CDS | 35.0% | |
| AAACGTCTAGGTAGGTTTAT+TGG | + | chr8_2:48815415-48815434 | None:intergenic | 35.0% | |
| GACATATTATGTGGAAAAGG+AGG | - | chr8_2:48815544-48815563 | Msa1252050:CDS | 35.0% | |
| ! | GACAGAAACCTTTTTCCAAA+TGG | - | chr8_2:48815631-48815650 | Msa1252050:CDS | 35.0% |
| ! | TTTTATCTTGCCACAGGTTT+TGG | + | chr8_2:48815663-48815682 | None:intergenic | 35.0% |
| !! | CTTCAAACATGTTGCTTTGA+CGG | + | chr8_2:48815686-48815705 | None:intergenic | 35.0% |
| ATAACAATTGGATCAGTGGA+AGG | - | chr8_2:48815725-48815744 | Msa1252050:CDS | 35.0% | |
| !! | CCAAGTTTTGTCAGGTTTAT+GGG | - | chr8_2:48815765-48815784 | Msa1252050:CDS | 35.0% |
| CTAGCATAGTATCAAACCAT+GGG | - | chr8_2:48815822-48815841 | Msa1252050:CDS | 35.0% | |
| ! | GCCGTTAATTTGAGATTGAA+CGG | - | chr8_2:48815965-48815984 | Msa1252050:CDS | 35.0% |
| ! | TAACTTCATGGTTTGGGATT+TGG | + | chr8_2:48816031-48816050 | None:intergenic | 35.0% |
| CTTTGAACATGTGAGACAAA+GGG | + | chr8_2:48816144-48816163 | None:intergenic | 35.0% | |
| AGAAGGATATGTTAGGTAGA+GGG | + | chr8_2:48816277-48816296 | None:intergenic | 35.0% | |
| GACTCGAAAAGTAAGAAGAA+AGG | - | chr8_2:48816400-48816419 | Msa1252050:intron | 35.0% | |
| GTTGTTAAAATAGCTCATGC+AGG | - | chr8_2:48816475-48816494 | Msa1252050:intron | 35.0% | |
| ACAAGATGTTTATAGACACG+CGG | - | chr8_2:48816504-48816523 | Msa1252050:intron | 35.0% | |
| TTTGTCATCAACGTGTAAAC+AGG | + | chr8_2:48816532-48816551 | None:intergenic | 35.0% | |
| TGAGGAGATTTGAAAACTTC+TGG | + | chr8_2:48816580-48816599 | None:intergenic | 35.0% | |
| TTCCATAATACAGATTGGTG+AGG | + | chr8_2:48816598-48816617 | None:intergenic | 35.0% | |
| ! | AAAGAAGATCTTTTGCTTCC+TGG | - | chr8_2:48816616-48816635 | Msa1252050:intron | 35.0% |
| ATCATGCCAAAGAGACTAAT+GGG | - | chr8_2:48816704-48816723 | Msa1252050:CDS | 35.0% | |
| !! | AGAGTTAAATGGTGTTGTAG+AGG | - | chr8_2:48816813-48816832 | Msa1252050:CDS | 35.0% |
| !! | GAGTTAAATGGTGTTGTAGA+GGG | - | chr8_2:48816814-48816833 | Msa1252050:CDS | 35.0% |
| ! | CTTAGTCCTCTTTTTCTTGA+AGG | + | chr8_2:48816949-48816968 | None:intergenic | 35.0% |
| ! | GGCGGAACAAAATTTTTCTT+TGG | + | chr8_2:48816973-48816992 | None:intergenic | 35.0% |
| ! | TATTGTCTTGCCTTTGGAAA+AGG | + | chr8_2:48816994-48817013 | None:intergenic | 35.0% |
| CTTCTATATTGTCTTGCCTT+TGG | + | chr8_2:48817000-48817019 | None:intergenic | 35.0% | |
| GGCAAGACAATATAGAAGTT+TGG | - | chr8_2:48817002-48817021 | Msa1252050:intron | 35.0% | |
| GACAATATAGAAGTTTGGGA+TGG | - | chr8_2:48817007-48817026 | Msa1252050:intron | 35.0% | |
| ! | ATGTGGAGCTTTGGTCAATT+TGG | - | chr8_2:48812445-48812464 | Msa1252050:CDS | 40.0% |
| CTTTGGTCAATTTGGCTATC+TGG | - | chr8_2:48812453-48812472 | Msa1252050:CDS | 40.0% | |
| ! | GTGTGATCCTTGTTGATTGA+AGG | + | chr8_2:48812522-48812541 | None:intergenic | 40.0% |
| AGGCTTAGGAGTTGTGAATA+TGG | + | chr8_2:48812601-48812620 | None:intergenic | 40.0% | |
| ! | CACAACTCCTAAGCCTTTTA+TGG | - | chr8_2:48812605-48812624 | Msa1252050:CDS | 40.0% |
| GTAGAGTCCATAAAAGGCTT+AGG | + | chr8_2:48812615-48812634 | None:intergenic | 40.0% | |
| ! | AAGCCTTTTATGGACTCTAC+TGG | - | chr8_2:48812615-48812634 | Msa1252050:CDS | 40.0% |
| GTTCCAGTAGAGTCCATAAA+AGG | + | chr8_2:48812621-48812640 | None:intergenic | 40.0% | |
| TTGCAAATGAGGCAACAGAA+GGG | + | chr8_2:48812716-48812735 | None:intergenic | 40.0% | |
| TGCTTACGTGAAATCGATGT+CGG | + | chr8_2:48812772-48812791 | None:intergenic | 40.0% | |
| ATTGATGTGCCTTCATGAGT+TGG | - | chr8_2:48812799-48812818 | Msa1252050:CDS | 40.0% | |
| TATGGTCTGCAATACAGTTG+CGG | + | chr8_2:48812981-48813000 | None:intergenic | 40.0% | |
| AATGGAAATAAGGACTGCCA+AGG | + | chr8_2:48813356-48813375 | None:intergenic | 40.0% | |
| CCAGAAAGGATAACTGTTTC+AGG | + | chr8_2:48813432-48813451 | None:intergenic | 40.0% | |
| CCTGAAACAGTTATCCTTTC+TGG | - | chr8_2:48813429-48813448 | Msa1252050:intron | 40.0% | |
| TACGAAAACAGAATTGGCAG+TGG | - | chr8_2:48813556-48813575 | Msa1252050:intron | 40.0% | |
| CAGAAAGAATGATCATGGCA+TGG | - | chr8_2:48813595-48813614 | Msa1252050:intron | 40.0% | |
| GGAAGAACTCCATTATGTAG+AGG | + | chr8_2:48813636-48813655 | None:intergenic | 40.0% | |
| GTTCTTCCACCTTTCATCTA+TGG | - | chr8_2:48813648-48813667 | Msa1252050:CDS | 40.0% | |
| CCTTTACCATAGATGAAAGG+TGG | + | chr8_2:48813657-48813676 | None:intergenic | 40.0% | |
| CCACCTTTCATCTATGGTAA+AGG | - | chr8_2:48813654-48813673 | Msa1252050:CDS | 40.0% | |
| ! | AGGCTATTTCATCTGAGTTC+AGG | - | chr8_2:48813703-48813722 | Msa1252050:CDS | 40.0% |
| GGTTTGTGTTTGATGCTAGT+TGG | - | chr8_2:48813724-48813743 | Msa1252050:CDS | 40.0% | |
| !! | GGAAAATGGAAGCTCTAAAG+AGG | + | chr8_2:48814111-48814130 | None:intergenic | 40.0% |
| ! | AGTTGCTGGCTATAGCTATA+AGG | - | chr8_2:48814184-48814203 | Msa1252050:intron | 40.0% |
| TACCTGCATATATAAAGGGG+AGG | + | chr8_2:48814549-48814568 | None:intergenic | 40.0% | |
| TCACACTCCTTAATATGGCA+GGG | - | chr8_2:48814897-48814916 | Msa1252050:intron | 40.0% | |
| TGGAATTCCCTGCCATATTA+AGG | + | chr8_2:48814907-48814926 | None:intergenic | 40.0% | |
| GGAAACACTTTGTTCCAAAG+TGG | + | chr8_2:48814977-48814996 | None:intergenic | 40.0% | |
| TGGCCAAAGGAGTTAAGAAA+GGG | + | chr8_2:48815104-48815123 | None:intergenic | 40.0% | |
| ATGGCCAAAGGAGTTAAGAA+AGG | + | chr8_2:48815105-48815124 | None:intergenic | 40.0% | |
| ATTGTGCAACAAGAACTGCA+TGG | + | chr8_2:48815124-48815143 | None:intergenic | 40.0% | |
| !!! | GATTTTCAAGTGTGAGATGC+AGG | + | chr8_2:48815177-48815196 | None:intergenic | 40.0% |
| AATTGCAGCCGTAGATAAAG+TGG | - | chr8_2:48815474-48815493 | Msa1252050:CDS | 40.0% | |
| GTGAAACATGCAGAAACTTC+AGG | - | chr8_2:48815496-48815515 | Msa1252050:CDS | 40.0% | |
| !! | GACATTTGTTATCACCGACA+CGG | + | chr8_2:48815576-48815595 | None:intergenic | 40.0% |
| !! | GCCAAGTTTTGTCAGGTTTA+TGG | - | chr8_2:48815764-48815783 | Msa1252050:CDS | 40.0% |
| CCCATAAACCTGACAAAACT+TGG | + | chr8_2:48815768-48815787 | None:intergenic | 40.0% | |
| TGCAGACACATTCTTGTACT+AGG | + | chr8_2:48815799-48815818 | None:intergenic | 40.0% | |
| GCTAGCATAGTATCAAACCA+TGG | - | chr8_2:48815821-48815840 | Msa1252050:CDS | 40.0% | |
| TTCCAAGCAGTAAACGATCT+TGG | - | chr8_2:48815878-48815897 | Msa1252050:CDS | 40.0% | |
| ! | CTTGGCAGTTAATCTGAGAT+CGG | - | chr8_2:48815896-48815915 | Msa1252050:CDS | 40.0% |
| ! | CATGGTTTGGGATTTGGATT+TGG | + | chr8_2:48816025-48816044 | None:intergenic | 40.0% |
| GTGAGACAAAGGGAAAAGAA+TGG | + | chr8_2:48816134-48816153 | None:intergenic | 40.0% | |
| ! | GCTTTGAACATGTGAGACAA+AGG | + | chr8_2:48816145-48816164 | None:intergenic | 40.0% |
| GTCTCACATGTTCAAAGCAT+TGG | - | chr8_2:48816147-48816166 | Msa1252050:intron | 40.0% | |
| CAGAAGGATATGTTAGGTAG+AGG | + | chr8_2:48816278-48816297 | None:intergenic | 40.0% | |
| AGGAAACATCAAGGGATACA+AGG | - | chr8_2:48816420-48816439 | Msa1252050:intron | 40.0% | |
| GTTAAAATAGCTCATGCAGG+TGG | - | chr8_2:48816478-48816497 | Msa1252050:intron | 40.0% | |
| !! | ACGTTGATGACAAAGTATCC+AGG | - | chr8_2:48816538-48816557 | Msa1252050:intron | 40.0% |
| CTCCTCACCAATCTGTATTA+TGG | - | chr8_2:48816593-48816612 | Msa1252050:intron | 40.0% | |
| ! | TCTCTTTGAAAGACGTTGAG+AGG | - | chr8_2:48816656-48816675 | Msa1252050:CDS | 40.0% |
| TCTTTGGCATGATCTTTCTC+TGG | + | chr8_2:48816697-48816716 | None:intergenic | 40.0% | |
| GATCATGCCAAAGAGACTAA+TGG | - | chr8_2:48816703-48816722 | Msa1252050:CDS | 40.0% | |
| TCATGCCAAAGAGACTAATG+GGG | - | chr8_2:48816705-48816724 | Msa1252050:CDS | 40.0% | |
| AAATCGAAGTCTCCTAGTAG+TGG | - | chr8_2:48816760-48816779 | Msa1252050:CDS | 40.0% | |
| TTCTGTTTGTGTCCACTACT+AGG | + | chr8_2:48816775-48816794 | None:intergenic | 40.0% | |
| GGACACAAACAGAAAGAGAA+TGG | - | chr8_2:48816781-48816800 | Msa1252050:CDS | 40.0% | |
| !! | AAATGGTGTTGTAGAGGGAA+TGG | - | chr8_2:48816819-48816838 | Msa1252050:CDS | 40.0% |
| ! | TTTTGTTCCGCCTTTTCCAA+AGG | - | chr8_2:48816981-48817000 | Msa1252050:intron | 40.0% |
| AGGCATTTCATGTGGAGCTT+TGG | - | chr8_2:48812436-48812455 | Msa1252050:CDS | 45.0% | |
| CTTGCAAATGAGGCAACAGA+AGG | + | chr8_2:48812717-48812736 | None:intergenic | 45.0% | |
| ! | CAAGTTCTTTTGATACCGGC+CGG | - | chr8_2:48812733-48812752 | Msa1252050:CDS | 45.0% |
| ! | AAGTTCTTTTGATACCGGCC+GGG | - | chr8_2:48812734-48812753 | Msa1252050:CDS | 45.0% |
| TGTCGGTATCAACTGAAACC+CGG | + | chr8_2:48812755-48812774 | None:intergenic | 45.0% | |
| AACGACACGCCTCTACATAA+TGG | - | chr8_2:48813624-48813643 | Msa1252050:intron | 45.0% | |
| GTCTATCCAATTGGACACCA+AGG | - | chr8_2:48813954-48813973 | Msa1252050:CDS | 45.0% | |
| TCATCAAGTTCACTCTGCCT+TGG | + | chr8_2:48813974-48813993 | None:intergenic | 45.0% | |
| AGGCAGAGTGAACTTGATGA+AGG | - | chr8_2:48813974-48813993 | Msa1252050:intron | 45.0% | |
| TATTGTCTCTGCCCTTGATC+AGG | - | chr8_2:48814259-48814278 | Msa1252050:CDS | 45.0% | |
| TTACCAATTCTCCGTCTTGC+AGG | - | chr8_2:48814286-48814305 | Msa1252050:CDS | 45.0% | |
| ATACCTGCAAGACGGAGAAT+TGG | + | chr8_2:48814292-48814311 | None:intergenic | 45.0% | |
| GACAGAACATACCTGCAAGA+CGG | + | chr8_2:48814300-48814319 | None:intergenic | 45.0% | |
| ! | ATAAAGGGGAGGCCAAGTTT+TGG | + | chr8_2:48814538-48814557 | None:intergenic | 45.0% |
| GTCACACTCCTTAATATGGC+AGG | - | chr8_2:48814896-48814915 | Msa1252050:intron | 45.0% | |
| ! | AGGTTTGATGACTGCCACTT+TGG | - | chr8_2:48814960-48814979 | Msa1252050:intron | 45.0% |
| GTGTTTCCAAAGGGTGACAA+AGG | - | chr8_2:48814989-48815008 | Msa1252050:intron | 45.0% | |
| ACTTCACCTTTGTCACCCTT+TGG | + | chr8_2:48814998-48815017 | None:intergenic | 45.0% | |
| AACAAGAACTGCATGGCCAA+AGG | + | chr8_2:48815117-48815136 | None:intergenic | 45.0% | |
| CAGAGTTCAAACGTCTAGGT+AGG | + | chr8_2:48815423-48815442 | None:intergenic | 45.0% | |
| CTACCTAGACGTTTGAACTC+TGG | - | chr8_2:48815421-48815440 | Msa1252050:CDS | 45.0% | |
| AAGCCAGAGTTCAAACGTCT+AGG | + | chr8_2:48815427-48815446 | None:intergenic | 45.0% | |
| ! | TTTGTTATCACCGACACGGT+TGG | + | chr8_2:48815572-48815591 | None:intergenic | 45.0% |
| GGTATGCGCCATTTGGAAAA+AGG | + | chr8_2:48815642-48815661 | None:intergenic | 45.0% | |
| !! | AGGTTTTGGTATGCGCCATT+TGG | + | chr8_2:48815649-48815668 | None:intergenic | 45.0% |
| !! | TGACGGTTTTATCTTGCCAC+AGG | + | chr8_2:48815669-48815688 | None:intergenic | 45.0% |
| TGCCAAGATCGTTTACTGCT+TGG | + | chr8_2:48815883-48815902 | None:intergenic | 45.0% | |
| ! | GCAGTTAATCTGAGATCGGA+CGG | - | chr8_2:48815900-48815919 | Msa1252050:CDS | 45.0% |
| GGTTGAGATCGAAAACTGCT+TGG | - | chr8_2:48815986-48816005 | Msa1252050:CDS | 45.0% | |
| ! | TTAGGTAGAGGGTGTAACGT+TGG | + | chr8_2:48816266-48816285 | None:intergenic | 45.0% |
| ! | TACCACCCCATTAGTCTCTT+TGG | + | chr8_2:48816713-48816732 | None:intergenic | 45.0% |
| TGTTGTAGAGGGAATGGAAG+TGG | - | chr8_2:48816825-48816844 | Msa1252050:CDS | 45.0% | |
| !!! | GGTTTTGTTGGCTTCTCCTT+AGG | + | chr8_2:48816928-48816947 | None:intergenic | 45.0% |
| ! | TGTCTTGCCTTTGGAAAAGG+CGG | + | chr8_2:48816991-48817010 | None:intergenic | 45.0% |
| ! | ATGAGGCAACAGAAGGGTGT+TGG | + | chr8_2:48812710-48812729 | None:intergenic | 50.0% |
| ATAAGGACTGCCAAGGAAGC+TGG | + | chr8_2:48813349-48813368 | None:intergenic | 50.0% | |
| GGGTGGAGATGAATCCAGAA+AGG | + | chr8_2:48813446-48813465 | None:intergenic | 50.0% | |
| !! | ACTCTGCCTTGGTGTCCAAT+TGG | + | chr8_2:48813963-48813982 | None:intergenic | 50.0% |
| GGCCTCCCCTTTATATATGC+AGG | - | chr8_2:48814544-48814563 | Msa1252050:intron | 50.0% | |
| AAAGGAGGATCCAACCGTGT+CGG | - | chr8_2:48815559-48815578 | Msa1252050:CDS | 50.0% | |
| ATGGCGCATACCAAAACCTG+TGG | - | chr8_2:48815650-48815669 | Msa1252050:CDS | 50.0% | |
| !! | CTTACGCGCCAAGTTTTGTC+AGG | - | chr8_2:48815757-48815776 | Msa1252050:CDS | 50.0% |
| TTTCTCGCTGCAGGGAATCT+GGG | + | chr8_2:48815849-48815868 | None:intergenic | 50.0% | |
| ! | TTTTCTCGCTGCAGGGAATC+TGG | + | chr8_2:48815850-48815869 | None:intergenic | 50.0% |
| ! | TGTGTGCTTTTCTCGCTGCA+GGG | + | chr8_2:48815857-48815876 | None:intergenic | 50.0% |
| ! | ATGTGTGCTTTTCTCGCTGC+AGG | + | chr8_2:48815858-48815877 | None:intergenic | 50.0% |
| AAACGCGTCGTTCACTCGTT+AGG | - | chr8_2:48816352-48816371 | Msa1252050:intron | 50.0% | |
| GGACTTGCGATACACATACC+TGG | + | chr8_2:48816559-48816578 | None:intergenic | 50.0% | |
| TGCCAAAGAGACTAATGGGG+TGG | - | chr8_2:48816708-48816727 | Msa1252050:CDS | 50.0% | |
| ! | ACCTAGTCTTCCAGCTGTGA+AGG | - | chr8_2:48817032-48817051 | Msa1252050:intron | 50.0% |
| TCCTTCACAGCTGGAAGACT+AGG | + | chr8_2:48817036-48817055 | None:intergenic | 50.0% | |
| !! | CCAGACAGACGCTTGCTGTT+CGG | - | chr8_2:48812640-48812659 | Msa1252050:CDS | 55.0% |
| !! | AGACGCTTGCTGTTCGGTCA+TGG | - | chr8_2:48812646-48812665 | Msa1252050:CDS | 55.0% |
| !! | GCTTGCTGTTCGGTCATGGT+TGG | - | chr8_2:48812650-48812669 | Msa1252050:CDS | 55.0% |
| GGTATCAACTGAAACCCGGC+CGG | + | chr8_2:48812751-48812770 | None:intergenic | 55.0% | |
| GGAGAGAGTTCCTTCACAGC+TGG | + | chr8_2:48817045-48817064 | None:intergenic | 55.0% | |
| CCGAACAGCAAGCGTCTGTC+TGG | + | chr8_2:48812643-48812662 | None:intergenic | 60.0% | |
| TGCAGGGAATCTGGGTCCCA+TGG | + | chr8_2:48815841-48815860 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 48812333 | 48817068 | 48812333 | ID=Msa1252050;Name=Msa1252050 |
| chr8_2 | mRNA | 48812333 | 48817068 | 48812333 | ID=Msa1252050-mRNA-1;Parent=Msa1252050;Name=Msa1252050-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0|0.83|1|1|6|0|880 |
| chr8_2 | exon | 48817063 | 48817068 | 48817063 | ID=Msa1252050-mRNA-1:exon:14752;Parent=Msa1252050-mRNA-1 |
| chr8_2 | exon | 48816617 | 48816963 | 48816617 | ID=Msa1252050-mRNA-1:exon:14751;Parent=Msa1252050-mRNA-1 |
| chr8_2 | exon | 48815094 | 48816051 | 48815094 | ID=Msa1252050-mRNA-1:exon:14750;Parent=Msa1252050-mRNA-1 |
| chr8_2 | exon | 48814237 | 48814483 | 48814237 | ID=Msa1252050-mRNA-1:exon:14749;Parent=Msa1252050-mRNA-1 |
| chr8_2 | exon | 48813633 | 48813991 | 48813633 | ID=Msa1252050-mRNA-1:exon:14748;Parent=Msa1252050-mRNA-1 |
| chr8_2 | exon | 48812333 | 48813058 | 48812333 | ID=Msa1252050-mRNA-1:exon:14747;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48817063 | 48817068 | 48817063 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48816617 | 48816963 | 48816617 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48815094 | 48816051 | 48815094 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48814237 | 48814483 | 48814237 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48813633 | 48813991 | 48813633 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| chr8_2 | CDS | 48812333 | 48813058 | 48812333 | ID=Msa1252050-mRNA-1:cds;Parent=Msa1252050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
