AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0945160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945160 MtrunA17_Chr4g0046561 96.758 401 0 1 1 388 1 401 0.0 774
Msa0945160 MtrunA17_Chr5g0419001 74.859 354 65 5 59 388 53 406 0.0 519
Msa0945160 MtrunA17_Chr3g0097931 42.492 313 169 6 70 375 92 400 3.26e-73 233
Msa0945160 MtrunA17_Chr2g0288011 41.967 305 167 5 76 375 95 394 1.82e-71 229
Msa0945160 MtrunA17_Chr4g0074541 39.247 372 211 7 12 375 27 391 3.07e-70 225
Msa0945160 MtrunA17_Chr2g0291851 37.867 375 197 12 18 372 33 391 1.19e-64 211
Msa0945160 MtrunA17_Chr6g0449891 40.968 310 164 8 90 388 117 418 5.93e-59 197
Msa0945160 MtrunA17_Chr3g0117501 39.735 302 163 6 94 385 118 410 1.83e-57 193
Msa0945160 MtrunA17_Chr4g0058971 39.161 286 156 7 97 372 96 373 3.80e-57 191
Msa0945160 MtrunA17_Chr1g0160071 25.170 294 206 5 96 381 24 311 1.23e-20 92.0
Msa0945160 MtrunA17_Chr3g0114581 24.746 295 210 6 94 381 23 312 2.05e-19 88.6
Msa0945160 MtrunA17_Chr4g0008071 27.974 311 184 10 92 383 19 308 3.48e-16 78.6
Msa0945160 MtrunA17_Chr3g0112981 26.284 331 215 11 73 386 4 322 1.61e-14 73.9
Msa0945160 MtrunA17_Chr4g0056661 26.537 309 200 7 92 388 59 352 4.06e-13 70.1
Msa0945160 MtrunA17_Chr5g0436341 27.517 298 187 13 102 386 25 306 2.20e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0945160 AT5G46110.1 76.098 410 76 5 1 388 1 410 0.0 600
Msa0945160 AT5G46110.4 75.735 408 77 5 1 386 1 408 0.0 595
Msa0945160 AT5G46110.3 73.902 410 74 6 1 388 1 399 0.0 573
Msa0945160 AT5G46110.2 91.186 295 26 0 94 388 3 297 0.0 555
Msa0945160 AT5G54800.1 44.337 309 161 6 74 375 83 387 7.35e-76 240
Msa0945160 AT1G61800.1 42.763 304 164 5 78 375 88 387 1.03e-71 229
Msa0945160 AT1G61800.2 42.157 306 167 5 78 377 88 389 1.74e-71 229
Msa0945160 AT5G17630.1 42.662 293 158 5 94 380 120 408 2.11e-68 222
Msa0945160 AT3G01550.1 40.066 302 169 4 94 388 87 383 1.67e-58 195
Msa0945160 AT5G33320.1 38.264 311 172 6 77 375 97 399 3.05e-55 187
Msa0945160 AT3G01550.2 38.742 302 168 5 94 388 87 378 4.31e-52 178
Msa0945160 AT4G03950.1 32.203 295 141 8 90 381 21 259 2.24e-31 120
Msa0945160 AT1G77610.1 24.830 294 207 5 96 381 19 306 6.65e-20 90.1
Msa0945160 AT1G21870.1 24.407 295 209 5 96 382 25 313 2.38e-18 85.9
Msa0945160 AT1G12500.1 27.148 291 194 6 102 384 75 355 2.63e-16 80.1
Msa0945160 AT3G11320.1 27.759 299 185 11 102 386 27 308 1.37e-15 77.4
Msa0945160 AT5G05820.1 26.962 293 192 9 102 384 27 307 8.66e-15 75.1

Find 129 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGTTAACCGTCTCTTCTT+TGG 0.202876 6_3:+23819614 None:intergenic
AATTCGTATCAGATCTCTTC+TGG 0.213269 6_3:-23816529 Msa0945160:CDS
AGAGCTATTTATGGCAATAA+TGG 0.232468 6_3:+23815740 None:intergenic
TCACTTGCTCCCGTTGTTCT+TGG 0.232843 6_3:-23817215 Msa0945160:intron
AATCAATTCACTCACAATTA+AGG 0.248369 6_3:+23816735 None:intergenic
CGTGTCGGTTATCCATTTAT+TGG 0.263404 6_3:-23817995 Msa0945160:CDS
AAACCACTCCCACCAATAAA+TGG 0.287957 6_3:+23817983 None:intergenic
TCGCTTCTCTTCCTCGATCT+TGG 0.296285 6_3:+23816081 None:intergenic
TGGTTTACTGTTTGGTCAGC+TGG 0.324605 6_3:-23817966 Msa0945160:CDS
ACTCTTTGTGCAGACTGATA+TGG 0.337590 6_3:-23816818 Msa0945160:intron
CTCAAACGTGTATTTGTCAT+TGG 0.341903 6_3:-23816324 Msa0945160:CDS
TTCAGCTGGTTGCCGTCTAT+TGG 0.351037 6_3:+23817498 None:intergenic
GATGGCGGGAACCTTGTCTT+TGG 0.354173 6_3:-23819389 Msa0945160:CDS
GGCAGTTCCGATACCAGTTT+GGG 0.371644 6_3:+23816144 None:intergenic
AATCAATTCCCATCACTCTA+TGG 0.376851 6_3:-23817241 Msa0945160:CDS
TGGCAGTTCCGATACCAGTT+TGG 0.380423 6_3:+23816143 None:intergenic
AACAAGTAGAGAGTGATATA+TGG 0.386915 6_3:+23819564 None:intergenic
CTCGATCTTGGCTTTGATGA+AGG 0.387113 6_3:+23816093 None:intergenic
GGAACTGCCATTGCAATTGC+TGG 0.398196 6_3:-23816130 Msa0945160:CDS
ACATTGGAATTTAAAATCTT+CGG 0.406321 6_3:-23815561 Msa0945160:three_prime_UTR
AACTGATCCGATCGATTTCA+CGG 0.408658 6_3:+23819415 None:intergenic
TTAATAACTTACTAAGGATA+GGG 0.410074 6_3:+23818719 None:intergenic
AACAAGATTTCCACCCAAAC+TGG 0.413459 6_3:-23816157 Msa0945160:CDS
TGCAATTGCTAAAGTAGGTT+TGG 0.416940 6_3:-23816555 Msa0945160:CDS
CAAACATTTCATTTACATAC+AGG 0.419014 6_3:-23816956 Msa0945160:CDS
ACGAGGGAGGGAGGAGAGTG+TGG 0.419739 6_3:+23819487 None:intergenic
CACTCTCTCCAATGTGTTGG+TGG 0.419872 6_3:+23816377 None:intergenic
ACTAAGAGGTTTATATGTCT+TGG 0.422975 6_3:+23815621 None:intergenic
TGACTGAGCTCTCATTCAAT+TGG 0.423986 6_3:-23817004 Msa0945160:CDS
GTAGCTGTGTGTCATGCATT+AGG 0.442771 6_3:-23817462 Msa0945160:CDS
GGTGGGAGTGGTTTACTGTT+TGG 0.449636 6_3:-23817974 Msa0945160:CDS
AGACATATAAACCTCTTAGT+TGG 0.457938 6_3:-23815618 Msa0945160:three_prime_UTR
GCTGATGCAATTGCTAAAGT+AGG 0.460289 6_3:-23816560 Msa0945160:CDS
GATCGATTTCACGGAGAGGA+TGG 0.462299 6_3:+23819424 None:intergenic
TTTAATAACTTACTAAGGAT+AGG 0.467169 6_3:+23818718 None:intergenic
GTCGGTTATCCATTTATTGG+TGG 0.471853 6_3:-23817992 Msa0945160:CDS
CGGCAGCGGCGAGGCAAGGA+CGG 0.472383 6_3:+23819309 None:intergenic
TTTGTTGAGACGAGGGAGGG+AGG 0.472501 6_3:+23819478 None:intergenic
AGAGCCGGTGAACAGAGTTC+AGG 0.474149 6_3:+23819353 None:intergenic
ATTCGTATCAGATCTCTTCT+GGG 0.475461 6_3:-23816528 Msa0945160:CDS
GCTGCTTCACAATTCATACT+TGG 0.476554 6_3:-23817266 Msa0945160:CDS
TAGAGCAATGATGGAAATGT+AGG 0.479737 6_3:+23816777 None:intergenic
GGAGAGGATGGAAGCGCCAT+TGG 0.481765 6_3:+23819436 None:intergenic
GCAGACAATTAGAGCAATGA+TGG 0.483032 6_3:+23816768 None:intergenic
AAGAAGTTACCAAGAACAAC+GGG 0.487858 6_3:+23817206 None:intergenic
TATCCATTTATTGGTGGGAG+TGG 0.488687 6_3:-23817986 Msa0945160:CDS
AGCAATTGCATCAGCGAAGC+CGG 0.492917 6_3:+23816568 None:intergenic
ACCTCACCCGGCGGAATCAT+CGG 0.495091 6_3:+23819289 None:intergenic
TGCAGCAAATGAGACATTGC+TGG 0.495272 6_3:+23817431 None:intergenic
CCTTGTTCATTCAGAAAACA+AGG 0.495300 6_3:-23815809 Msa0945160:three_prime_UTR
AGACTCAACAACCAACTAAG+AGG 0.499187 6_3:+23815607 None:intergenic
CGATGAAGTTTGTTGAGACG+AGG 0.500425 6_3:+23819470 None:intergenic
GAGAGACTTACTGCGCGCTT+AGG 0.501415 6_3:+23817931 None:intergenic
CAGCAAGCAAAAGCAGCATA+AGG 0.501533 6_3:-23815968 Msa0945160:exon
TCGGTTATCCATTTATTGGT+GGG 0.505174 6_3:-23817991 Msa0945160:CDS
GAGCTCTCATTCAATTGGCT+CGG 0.505943 6_3:-23816999 Msa0945160:CDS
CGGGAATCAGCAACTTCAGC+TGG 0.506724 6_3:+23817484 None:intergenic
AGCAGCATAAGGCGTCAACT+TGG 0.507742 6_3:-23815957 Msa0945160:exon
GATTTACCTGGTTGTAGAGA+TGG 0.509613 6_3:+23816492 None:intergenic
GCCGCTGCCGATGATTCCGC+CGG 0.511156 6_3:-23819296 Msa0945160:CDS
AAGTTTGTTGAGACGAGGGA+GGG 0.518226 6_3:+23819475 None:intergenic
CAGGGGAGAGAAGGTTGCTC+CGG 0.518248 6_3:-23819197 Msa0945160:CDS
TACTTGCTAAAGAATCCAAC+CGG 0.520051 6_3:+23819178 None:intergenic
GATTTGATCCCATAGATTGA+AGG 0.520311 6_3:-23816608 Msa0945160:intron
TCGGATCAGTTTCTGATGGC+GGG 0.521746 6_3:-23819403 Msa0945160:CDS
AAGTGAGAGCCATAGAGTGA+TGG 0.522847 6_3:+23817232 None:intergenic
AGTGAGAGCCATAGAGTGAT+GGG 0.525111 6_3:+23817233 None:intergenic
GGAGAGAAGGTTGCTCCGGT+TGG 0.525536 6_3:-23819193 Msa0945160:CDS
AGCCACTCTCTCCAATGTGT+TGG 0.526441 6_3:+23816374 None:intergenic
AATTATAGATCTTCTTGTTG+AGG 0.527892 6_3:+23818747 None:intergenic
TCTTTCACACATACCATCAA+AGG 0.528158 6_3:-23817399 Msa0945160:intron
AATGCATGACACACAGCTAC+GGG 0.532470 6_3:+23817465 None:intergenic
ATTTCCACCCAAACTGGTAT+CGG 0.535499 6_3:-23816151 Msa0945160:CDS
TAATAACTTACTAAGGATAG+GGG 0.543020 6_3:+23818720 None:intergenic
GTATCAGATCTCTTCTGGGT+TGG 0.543662 6_3:-23816524 Msa0945160:CDS
CTGTTTGGTCAGCTGGACCG+TGG 0.546831 6_3:-23817959 Msa0945160:CDS
TCATCGGCAGCGGCGAGGCA+AGG 0.548987 6_3:+23819305 None:intergenic
ACTCCATTAGAATCAAAATG+TGG 0.551061 6_3:+23819531 None:intergenic
ATTTGATCCCATAGATTGAA+GGG 0.554805 6_3:-23816607 Msa0945160:intron
CCCGGCGGAATCATCGGCAG+CGG 0.556477 6_3:+23819295 None:intergenic
GATGTTTGTGTTGGTACCTG+TGG 0.556664 6_3:+23819589 None:intergenic
GCTCCTCTCACTCATGCCGT+TGG 0.557451 6_3:-23816354 Msa0945160:CDS
TAATGCATGACACACAGCTA+CGG 0.558261 6_3:+23817464 None:intergenic
ACACACATGAATGTAGTCTC+TGG 0.560522 6_3:-23815663 Msa0945160:three_prime_UTR
ATGAGACATTGCTGGTCACA+TGG 0.561772 6_3:+23817439 None:intergenic
GACTTACTGCGCGCTTAGGA+AGG 0.561943 6_3:+23817935 None:intergenic
TTGTTTGTGTAGCCAATAGA+CGG 0.564438 6_3:-23817510 Msa0945160:intron
AGCATAAGGCGTCAACTTGG+AGG 0.572414 6_3:-23815954 Msa0945160:exon
TGTTTGGTCAGCTGGACCGT+GGG 0.573783 6_3:-23817958 Msa0945160:CDS
CACCAACACATTGGAGAGAG+TGG 0.574915 6_3:-23816376 Msa0945160:CDS
TATATGGATGATGTTTGTGT+TGG 0.581522 6_3:+23819580 None:intergenic
ATCCTCTCCGTGAAATCGAT+CGG 0.583038 6_3:-23819422 Msa0945160:CDS
CTCCATTAGAATCAAAATGT+GGG 0.586256 6_3:+23819532 None:intergenic
TCACCGGCTCTTAAGAAAAG+TGG 0.587737 6_3:-23819341 Msa0945160:CDS
TGCCATTGCAATTGCTGGAG+TGG 0.587820 6_3:-23816125 Msa0945160:CDS
CCGCTGCCGATGATTCCGCC+GGG 0.591829 6_3:-23819295 Msa0945160:intron
GAAGCAGCAGCATTAAAGAA+TGG 0.593864 6_3:+23817281 None:intergenic
CCAGGTGGCCACCAACACAT+TGG 0.595085 6_3:-23816385 Msa0945160:intron
AGGGAGGGAGGAGAGTGTGG+TGG 0.595691 6_3:+23819490 None:intergenic
TTGCCAACGGCATGAGTGAG+AGG 0.596312 6_3:+23816351 None:intergenic
TCGTCCTGAACTCTGTTCAC+CGG 0.596519 6_3:-23819357 Msa0945160:CDS
CATCGTGAACACCTCACCAA+TGG 0.599816 6_3:-23819452 Msa0945160:CDS
ATCTCATGAACTAAGCACAT+TGG 0.604393 6_3:-23815577 Msa0945160:three_prime_UTR
CGGAATCATCGGCAGCGGCG+AGG 0.608524 6_3:+23819300 None:intergenic
ATCGGATCAGTTTCTGATGG+CGG 0.609178 6_3:-23819404 Msa0945160:CDS
GGATGGAAGCGCCATTGGTG+AGG 0.610076 6_3:+23819441 None:intergenic
TCTAATTGTCTGCATACCAC+CGG 0.610547 6_3:-23816758 Msa0945160:CDS
ACGTTTGAGTACGTTGCCAA+CGG 0.612463 6_3:+23816338 None:intergenic
AATTCACTCACAATTAAGGC+CGG 0.613004 6_3:+23816739 None:intergenic
TATTTGCTCCAAAGAAGAGA+CGG 0.623172 6_3:-23819622 Msa0945160:five_prime_UTR
TGCCACTCCAGCAATTGCAA+TGG 0.625518 6_3:+23816123 None:intergenic
TATCTATTCAAAGAAAGCCA+TGG 0.627126 6_3:-23816931 Msa0945160:intron
GATGAAGTTTGTTGAGACGA+GGG 0.627977 6_3:+23819471 None:intergenic
GAAGTTTGTTGAGACGAGGG+AGG 0.628044 6_3:+23819474 None:intergenic
AGACGGTTAACGAGAACCAC+AGG 0.632710 6_3:-23819605 Msa0945160:five_prime_UTR
GTGTATGTGCAGCTTCGTGT+CGG 0.636132 6_3:-23818010 Msa0945160:intron
CAGCGGCGAGGCAAGGACGG+AGG 0.637021 6_3:+23819312 None:intergenic
TGCGCGCTTAGGAAGGCCCA+CGG 0.638276 6_3:+23817942 None:intergenic
GAAGTTGTCTTCCAAAGACA+AGG 0.638659 6_3:+23819378 None:intergenic
GGGCCTACACTGTTGAAGAC+CGG 0.640749 6_3:-23816587 Msa0945160:CDS
AAGCCGGTCTTCAACAGTGT+AGG 0.642574 6_3:+23816584 None:intergenic
TCGATCGGATCAGTTTCTGA+TGG 0.645770 6_3:-23819407 Msa0945160:CDS
TAAGAAGTTACCAAGAACAA+CGG 0.648794 6_3:+23817205 None:intergenic
AGTTCCGATACCAGTTTGGG+TGG 0.649750 6_3:+23816147 None:intergenic
GGAAATGTAGGCATAGACAT+TGG 0.654461 6_3:+23816789 None:intergenic
AATGTGCTTAGTTCATGAGA+TGG 0.658035 6_3:+23815579 None:intergenic
CTTCATCAAAGCCAAGATCG+AGG 0.668234 6_3:-23816092 Msa0945160:CDS
TCACTCACAATTAAGGCCGG+TGG 0.670675 6_3:+23816742 None:intergenic
ATCCGATCGATTTCACGGAG+AGG 0.699922 6_3:+23819420 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAATAATAAGATACA+AGG + chr6_3:23816573-23816592 None:intergenic 15.0%
!!! TCAATCTTTTTTTTTTTTTG+AGG - chr6_3:23816830-23816849 Msa0945160:intron 15.0%
!! AAAACTTTATGATAAAGATA+TGG - chr6_3:23817841-23817860 Msa0945160:intron 15.0%
!!! ATTTTCAATGTAAACAATTT+TGG - chr6_3:23818745-23818764 Msa0945160:CDS 15.0%
!! AAGTGTTTATTTACTTATAT+TGG - chr6_3:23818977-23818996 Msa0945160:intron 15.0%
!! AGTGTTTATTTACTTATATT+GGG - chr6_3:23818978-23818997 Msa0945160:intron 15.0%
!!! AATGTTGTTTTTTTGTTTAC+AGG - chr6_3:23815995-23816014 Msa0945160:intron 20.0%
!!! ATGTTGTTTTTTTGTTTACA+GGG - chr6_3:23815996-23816015 Msa0945160:intron 20.0%
!! TTAATAACTTACTAAGGATA+GGG + chr6_3:23816495-23816514 None:intergenic 20.0%
!! TTTAATAACTTACTAAGGAT+AGG + chr6_3:23816496-23816515 None:intergenic 20.0%
!!! CGAATTTTAATAACTTACTA+AGG + chr6_3:23816501-23816520 None:intergenic 20.0%
!!! ATCTGAATTCTTTTTTTGAA+GGG + chr6_3:23816765-23816784 None:intergenic 20.0%
!!! AATCTGAATTCTTTTTTTGA+AGG + chr6_3:23816766-23816785 None:intergenic 20.0%
!!! GAATGTATCTACTTTTTTTA+CGG - chr6_3:23816958-23816977 Msa0945160:CDS 20.0%
!! AAAAAAAAAAAAGTTAGACC+TGG - chr6_3:23817409-23817428 Msa0945160:CDS 20.0%
!! AGTTTCACAATAAATAAGTT+AGG - chr6_3:23817610-23817629 Msa0945160:intron 20.0%
!! AAAATCTAAGTATATTTGCT+AGG + chr6_3:23818337-23818356 None:intergenic 20.0%
!! CAGATTAAGTATTAATTCAT+GGG + chr6_3:23818516-23818535 None:intergenic 20.0%
!! ACAGATTAAGTATTAATTCA+TGG + chr6_3:23818517-23818536 None:intergenic 20.0%
!! ATACTTAATCTGTATTAATG+TGG - chr6_3:23818524-23818543 Msa0945160:intron 20.0%
!! AATTGTTTACATTGAAAATG+AGG + chr6_3:23818744-23818763 None:intergenic 20.0%
!!! TTAAAAGTGCAATAATATGA+TGG + chr6_3:23818950-23818969 None:intergenic 20.0%
!! ATAATAATGTCAGTTGTATT+TGG + chr6_3:23819207-23819226 None:intergenic 20.0%
!!! AACAAAGTCAATTATTTTGA+AGG + chr6_3:23819312-23819331 None:intergenic 20.0%
!! AGATTTGACAAAAATAAAGA+AGG + chr6_3:23819378-23819397 None:intergenic 20.0%
!!! ATAGTTTTAAGAGCTATTTA+TGG + chr6_3:23819483-23819502 None:intergenic 20.0%
!!! ACATTGGAATTTAAAATCTT+CGG - chr6_3:23819650-23819669 Msa0945160:five_prime_UTR 20.0%
! TTGACATTTAAAAACTAGTG+AGG - chr6_3:23815563-23815582 Msa0945160:three_prime_UTR 25.0%
!!! TGTTGTTTTTTTGTTTACAG+GGG - chr6_3:23815997-23816016 Msa0945160:intron 25.0%
! ATCATGATACTAATATGTGT+CGG - chr6_3:23816236-23816255 Msa0945160:intron 25.0%
! AATTATAGATCTTCTTGTTG+AGG + chr6_3:23816467-23816486 None:intergenic 25.0%
! TAATAACTTACTAAGGATAG+GGG + chr6_3:23816494-23816513 None:intergenic 25.0%
!! TTCGTTTTATATTTCCATCT+TGG - chr6_3:23816517-23816536 Msa0945160:CDS 25.0%
! TATGACAAGAAAAGAAACTA+AGG + chr6_3:23817156-23817175 None:intergenic 25.0%
! CACCATGTTATGTTATTAAT+CGG - chr6_3:23817540-23817559 Msa0945160:intron 25.0%
! AACCGATTAATAACATAACA+TGG + chr6_3:23817545-23817564 None:intergenic 25.0%
! GTTATGTTATTAATCGGTTA+AGG - chr6_3:23817546-23817565 Msa0945160:intron 25.0%
!! AATTTTTCATGCATACATGA+AGG + chr6_3:23818106-23818125 None:intergenic 25.0%
! TGCATGAAAAATTGATCATA+TGG - chr6_3:23818113-23818132 Msa0945160:intron 25.0%
! CAAACATTTCATTTACATAC+AGG - chr6_3:23818255-23818274 Msa0945160:intron 25.0%
!! AGAAGGTATATAATTAACCA+TGG + chr6_3:23818300-23818319 None:intergenic 25.0%
! AATCAATTCACTCACAATTA+AGG + chr6_3:23818479-23818498 None:intergenic 25.0%
!!! AAAATACTTTGCTCTTGTTT+TGG - chr6_3:23818557-23818576 Msa0945160:intron 25.0%
! ATATAATATATAGTTCCAGC+AGG + chr6_3:23818782-23818801 None:intergenic 25.0%
!! GGATTTTCAATCATTATCTT+CGG - chr6_3:23818908-23818927 Msa0945160:intron 25.0%
! AAAATGTCAGATTTCTTGAA+TGG + chr6_3:23819007-23819026 None:intergenic 25.0%
! TGAATATAATTGCTTGACAT+AGG - chr6_3:23819030-23819049 Msa0945160:intron 25.0%
TATATGGATGATGTTTGTGT+TGG + chr6_3:23815634-23815653 None:intergenic 30.0%
AACAAGTAGAGAGTGATATA+TGG + chr6_3:23815650-23815669 None:intergenic 30.0%
!!! TTCCCACATTTTGATTCTAA+TGG - chr6_3:23815677-23815696 Msa0945160:three_prime_UTR 30.0%
CTCCATTAGAATCAAAATGT+GGG + chr6_3:23815682-23815701 None:intergenic 30.0%
ACTCCATTAGAATCAAAATG+TGG + chr6_3:23815683-23815702 None:intergenic 30.0%
!! TTAAGTCAGAACGGATTAAA+CGG + chr6_3:23815948-23815967 None:intergenic 30.0%
!!! ACGGAATTTTTAAGTCAGAA+CGG + chr6_3:23815957-23815976 None:intergenic 30.0%
GTAATCATATGTGTTAGTGT+CGG - chr6_3:23816213-23816232 Msa0945160:intron 30.0%
! TTTTTGTCCTTTTGATATGC+AGG - chr6_3:23816415-23816434 Msa0945160:intron 30.0%
!! AAAAGTACCTGCATATCAAA+AGG + chr6_3:23816425-23816444 None:intergenic 30.0%
TAAGATACAAGGATAAGACA+TGG + chr6_3:23816562-23816581 None:intergenic 30.0%
TGTATCTTCATGTGCTAAAA+AGG - chr6_3:23816598-23816617 Msa0945160:intron 30.0%
ATGTGCTAAAAAGGACATTA+TGG - chr6_3:23816607-23816626 Msa0945160:intron 30.0%
TAAGCAATCATCATGGTTTA+GGG + chr6_3:23817317-23817336 None:intergenic 30.0%
TTAAGCAATCATCATGGTTT+AGG + chr6_3:23817318-23817337 None:intergenic 30.0%
AACCATGATGATTGCTTAAT+AGG - chr6_3:23817319-23817338 Msa0945160:intron 30.0%
!! GCGAATTTTGAGTAATTCAA+GGG + chr6_3:23817346-23817365 None:intergenic 30.0%
!! TGCGAATTTTGAGTAATTCA+AGG + chr6_3:23817347-23817366 None:intergenic 30.0%
!!! TTTTTTTTAAGAAACCGACC+AGG + chr6_3:23817392-23817411 None:intergenic 30.0%
AAAAAAAAGTTAGACCTGGT+TGG - chr6_3:23817413-23817432 Msa0945160:CDS 30.0%
TATAGCTTAAAAAACCAACC+AGG + chr6_3:23817430-23817449 None:intergenic 30.0%
!! AAGTTTTATGTCACCTTTGA+TGG + chr6_3:23817828-23817847 None:intergenic 30.0%
TAAGAAGTTACCAAGAACAA+CGG + chr6_3:23818009-23818028 None:intergenic 30.0%
GAAAAATTGATCATATGGAG+AGG - chr6_3:23818118-23818137 Msa0945160:intron 30.0%
!! TTTTGTTTGTGACACTTTTC+AGG - chr6_3:23818167-23818186 Msa0945160:intron 30.0%
TATCTATTCAAAGAAAGCCA+TGG - chr6_3:23818280-23818299 Msa0945160:intron 30.0%
! ATATTTGCTAGGAATGAAGT+TGG + chr6_3:23818326-23818345 None:intergenic 30.0%
ATTTGATCCCATAGATTGAA+GGG - chr6_3:23818604-23818623 Msa0945160:intron 30.0%
ATTGAAAATGAGGATTTACC+TGG + chr6_3:23818734-23818753 None:intergenic 30.0%
! TTGTTTTCTGAATGAACAAG+GGG + chr6_3:23819403-23819422 None:intergenic 30.0%
!! CTTGTTTTCTGAATGAACAA+GGG + chr6_3:23819404-23819423 None:intergenic 30.0%
AGAGCTATTTATGGCAATAA+TGG + chr6_3:23819474-23819493 None:intergenic 30.0%
ACTAAGAGGTTTATATGTCT+TGG + chr6_3:23819593-23819612 None:intergenic 30.0%
AGACATATAAACCTCTTAGT+TGG - chr6_3:23819593-23819612 Msa0945160:five_prime_UTR 30.0%
TATTTGCTCCAAAGAAGAGA+CGG - chr6_3:23815589-23815608 Msa0945160:three_prime_UTR 35.0%
! TACTTGCTAAAGAATCCAAC+CGG + chr6_3:23816036-23816055 None:intergenic 35.0%
TGGATTCTTTAGCAAGTATC+CGG - chr6_3:23816038-23816057 Msa0945160:intron 35.0%
CCAAGTGAAGAAGAAAAAAC+CGG + chr6_3:23816073-23816092 None:intergenic 35.0%
TGTCTGTATCAGTGTTTCAT+CGG + chr6_3:23816105-23816124 None:intergenic 35.0%
TCGGTTATCCATTTATTGGT+GGG - chr6_3:23817220-23817239 Msa0945160:CDS 35.0%
ATCATGGTTTAGGGGATTAT+GGG + chr6_3:23817308-23817327 None:intergenic 35.0%
AAGCAATCATCATGGTTTAG+GGG + chr6_3:23817316-23817335 None:intergenic 35.0%
GACCTATTAAGCAATCATCA+TGG + chr6_3:23817324-23817343 None:intergenic 35.0%
CAAACATTAGAAGTTAGACC+TGG - chr6_3:23817371-23817390 Msa0945160:intron 35.0%
TTCAGAATTGTTCAACCCAT+CGG + chr6_3:23817476-23817495 None:intergenic 35.0%
! ATGGGTTGAACAATTCTGAA+GGG - chr6_3:23817476-23817495 Msa0945160:CDS 35.0%
ACATGGTGAATTCAGAAAAG+TGG + chr6_3:23817528-23817547 None:intergenic 35.0%
TAAACTAGTAGCGTCTCAAA+AGG + chr6_3:23817589-23817608 None:intergenic 35.0%
TTGTTTGTGTAGCCAATAGA+CGG - chr6_3:23817701-23817720 Msa0945160:intron 35.0%
TCTTTCACACATACCATCAA+AGG - chr6_3:23817812-23817831 Msa0945160:intron 35.0%
AATCAATTCCCATCACTCTA+TGG - chr6_3:23817970-23817989 Msa0945160:CDS 35.0%
AAGAAGTTACCAAGAACAAC+GGG + chr6_3:23818008-23818027 None:intergenic 35.0%
ACATGAAGGATTGTTGTAAG+TGG + chr6_3:23818092-23818111 None:intergenic 35.0%
ATGGAGAGGAATTTAGTAAC+TGG - chr6_3:23818132-23818151 Msa0945160:intron 35.0%
! TAGAGCAATGATGGAAATGT+AGG + chr6_3:23818437-23818456 None:intergenic 35.0%
AATTCACTCACAATTAAGGC+CGG + chr6_3:23818475-23818494 None:intergenic 35.0%
GATTTGATCCCATAGATTGA+AGG - chr6_3:23818603-23818622 Msa0945160:intron 35.0%
TGCAATTGCTAAAGTAGGTT+TGG - chr6_3:23818656-23818675 Msa0945160:intron 35.0%
AATTCGTATCAGATCTCTTC+TGG - chr6_3:23818682-23818701 Msa0945160:intron 35.0%
ATTCGTATCAGATCTCTTCT+GGG - chr6_3:23818683-23818702 Msa0945160:intron 35.0%
! TACCTACATTTTTCATTGCC+AGG - chr6_3:23818808-23818827 Msa0945160:intron 35.0%
CTCAAACGTGTATTTGTCAT+TGG - chr6_3:23818887-23818906 Msa0945160:intron 35.0%
CTTGCTGAGAAGAAAAAGAA+AGG + chr6_3:23819230-23819249 None:intergenic 35.0%
!!! CCTTGTTTTCTGAATGAACA+AGG + chr6_3:23819405-23819424 None:intergenic 35.0%
CCTTGTTCATTCAGAAAACA+AGG - chr6_3:23819402-23819421 Msa0945160:CDS 35.0%
AATGTGCTTAGTTCATGAGA+TGG + chr6_3:23819635-23819654 None:intergenic 35.0%
ATCTCATGAACTAAGCACAT+TGG - chr6_3:23819634-23819653 Msa0945160:five_prime_UTR 35.0%
!! GATGAAGTTTGTTGAGACGA+GGG + chr6_3:23815743-23815762 None:intergenic 40.0%
! AACTGATCCGATCGATTTCA+CGG + chr6_3:23815799-23815818 None:intergenic 40.0%
GAAGTTGTCTTCCAAAGACA+AGG + chr6_3:23815836-23815855 None:intergenic 40.0%
!! ACACCACTTTTCTTAAGAGC+CGG + chr6_3:23815876-23815895 None:intergenic 40.0%
TAGTGAGTACAGTTACACGA+CGG + chr6_3:23815976-23815995 None:intergenic 40.0%
!! TTTTGTTTACAGGGGAGAGA+AGG - chr6_3:23816005-23816024 Msa0945160:intron 40.0%
AAAAAACCGGTAGTAAGAGC+CGG + chr6_3:23816060-23816079 None:intergenic 40.0%
!!! CCGGTTTTTTCTTCTTCACT+TGG - chr6_3:23816070-23816089 Msa0945160:intron 40.0%
! TTAGGTATTGTAGCCGTGTT+CGG + chr6_3:23816265-23816284 None:intergenic 40.0%
ACAAACACAGACACTCTCTT+AGG + chr6_3:23816283-23816302 None:intergenic 40.0%
CATGGAATACATGAACGAAC+AGG + chr6_3:23816544-23816563 None:intergenic 40.0%
!! CGTGTCGGTTATCCATTTAT+TGG - chr6_3:23817216-23817235 Msa0945160:CDS 40.0%
GTCGGTTATCCATTTATTGG+TGG - chr6_3:23817219-23817238 Msa0945160:CDS 40.0%
TATCCATTTATTGGTGGGAG+TGG - chr6_3:23817225-23817244 Msa0945160:CDS 40.0%
AAACCACTCCCACCAATAAA+TGG + chr6_3:23817231-23817250 None:intergenic 40.0%
CATCATGGTTTAGGGGATTA+TGG + chr6_3:23817309-23817328 None:intergenic 40.0%
CATTAGAAGTTAGACCTGGT+CGG - chr6_3:23817375-23817394 Msa0945160:intron 40.0%
ATCAGAAGTTACGATCCGAT+GGG - chr6_3:23817458-23817477 Msa0945160:CDS 40.0%
!! GATGGGTTGAACAATTCTGA+AGG - chr6_3:23817475-23817494 Msa0945160:CDS 40.0%
TGGTGAATTCAGAAAAGTGG+TGG + chr6_3:23817525-23817544 None:intergenic 40.0%
TAATGCATGACACACAGCTA+CGG + chr6_3:23817750-23817769 None:intergenic 40.0%
GAAGCAGCAGCATTAAAGAA+TGG + chr6_3:23817933-23817952 None:intergenic 40.0%
GCTGCTTCACAATTCATACT+TGG - chr6_3:23817945-23817964 Msa0945160:CDS 40.0%
TGACTGAGCTCTCATTCAAT+TGG - chr6_3:23818207-23818226 Msa0945160:intron 40.0%
AGGAATGAAGTTGGAGAAGA+AGG + chr6_3:23818317-23818336 None:intergenic 40.0%
ACTCTTTGTGCAGACTGATA+TGG - chr6_3:23818393-23818412 Msa0945160:intron 40.0%
GGAAATGTAGGCATAGACAT+TGG + chr6_3:23818425-23818444 None:intergenic 40.0%
GCAGACAATTAGAGCAATGA+TGG + chr6_3:23818446-23818465 None:intergenic 40.0%
TCTAATTGTCTGCATACCAC+CGG - chr6_3:23818453-23818472 Msa0945160:intron 40.0%
GCTGATGCAATTGCTAAAGT+AGG - chr6_3:23818651-23818670 Msa0945160:intron 40.0%
! GTTTTACCATCTCTACAACC+AGG - chr6_3:23818713-23818732 Msa0945160:intron 40.0%
GATTTACCTGGTTGTAGAGA+TGG + chr6_3:23818722-23818741 None:intergenic 40.0%
TTGGATGATATTAAGCCTGC+TGG - chr6_3:23818764-23818783 Msa0945160:CDS 40.0%
CACCTGGCAATGAAAAATGT+AGG + chr6_3:23818813-23818832 None:intergenic 40.0%
! CTACATTTTTCATTGCCAGG+TGG - chr6_3:23818811-23818830 Msa0945160:intron 40.0%
AACAAGATTTCCACCCAAAC+TGG - chr6_3:23819054-23819073 Msa0945160:intron 40.0%
ATTTCCACCCAAACTGGTAT+CGG - chr6_3:23819060-23819079 Msa0945160:intron 40.0%
ACACACATGAATGTAGTCTC+TGG - chr6_3:23819548-23819567 Msa0945160:five_prime_UTR 40.0%
AGACTCAACAACCAACTAAG+AGG + chr6_3:23819607-23819626 None:intergenic 40.0%
CTCGTTAACCGTCTCTTCTT+TGG + chr6_3:23815600-23815619 None:intergenic 45.0%
! GATGTTTGTGTTGGTACCTG+TGG + chr6_3:23815625-23815644 None:intergenic 45.0%
!! AAGTTTGTTGAGACGAGGGA+GGG + chr6_3:23815739-23815758 None:intergenic 45.0%
!! CGATGAAGTTTGTTGAGACG+AGG + chr6_3:23815744-23815763 None:intergenic 45.0%
ATCCTCTCCGTGAAATCGAT+CGG - chr6_3:23815789-23815808 Msa0945160:three_prime_UTR 45.0%
TCGATCGGATCAGTTTCTGA+TGG - chr6_3:23815804-23815823 Msa0945160:three_prime_UTR 45.0%
ATCGGATCAGTTTCTGATGG+CGG - chr6_3:23815807-23815826 Msa0945160:three_prime_UTR 45.0%
!! TCACCGGCTCTTAAGAAAAG+TGG - chr6_3:23815870-23815889 Msa0945160:three_prime_UTR 45.0%
AAGTATCCGGCTCTTACTAC+CGG - chr6_3:23816051-23816070 Msa0945160:intron 45.0%
TAAACCACATCGTGTGTGAG+TGG - chr6_3:23816362-23816381 Msa0945160:CDS 45.0%
ATGAACGAACAGGACCAAGA+TGG + chr6_3:23816534-23816553 None:intergenic 45.0%
TGGTTTACTGTTTGGTCAGC+TGG - chr6_3:23817245-23817264 Msa0945160:CDS 45.0%
CATCAGAAGTTACGATCCGA+TGG - chr6_3:23817457-23817476 Msa0945160:CDS 45.0%
AATGCATGACACACAGCTAC+GGG + chr6_3:23817749-23817768 None:intergenic 45.0%
GTAGCTGTGTGTCATGCATT+AGG - chr6_3:23817749-23817768 Msa0945160:intron 45.0%
ATGAGACATTGCTGGTCACA+TGG + chr6_3:23817775-23817794 None:intergenic 45.0%
TGCAGCAAATGAGACATTGC+TGG + chr6_3:23817783-23817802 None:intergenic 45.0%
AGTGAGAGCCATAGAGTGAT+GGG + chr6_3:23817981-23818000 None:intergenic 45.0%
AAGTGAGAGCCATAGAGTGA+TGG + chr6_3:23817982-23818001 None:intergenic 45.0%
!!! ACACTTTTCAGGTGTGTCGT+TGG - chr6_3:23818178-23818197 Msa0945160:intron 45.0%
GAGCTCTCATTCAATTGGCT+CGG - chr6_3:23818212-23818231 Msa0945160:intron 45.0%
GTGTAGGCCCTTCAATCTAT+GGG + chr6_3:23818614-23818633 None:intergenic 45.0%
AGTGTAGGCCCTTCAATCTA+TGG + chr6_3:23818615-23818634 None:intergenic 45.0%
GTATCAGATCTCTTCTGGGT+TGG - chr6_3:23818687-23818706 Msa0945160:intron 45.0%
ACGTTTGAGTACGTTGCCAA+CGG + chr6_3:23818876-23818895 None:intergenic 45.0%
!! CTCGATCTTGGCTTTGATGA+AGG + chr6_3:23819121-23819140 None:intergenic 45.0%
CTTCATCAAAGCCAAGATCG+AGG - chr6_3:23819119-23819138 Msa0945160:intron 45.0%
CAGCAAGCAAAAGCAGCATA+AGG - chr6_3:23819243-23819262 Msa0945160:intron 45.0%
!!! ATTTTTCTAATTATTATATA+TGG + chr6_3:23816143-23816162 None:intergenic 5.0%
AGACGGTTAACGAGAACCAC+AGG - chr6_3:23815606-23815625 Msa0945160:three_prime_UTR 50.0%
!! GAAGTTTGTTGAGACGAGGG+AGG + chr6_3:23815740-23815759 None:intergenic 50.0%
CATCGTGAACACCTCACCAA+TGG - chr6_3:23815759-23815778 Msa0945160:three_prime_UTR 50.0%
! GATCGATTTCACGGAGAGGA+TGG + chr6_3:23815790-23815809 None:intergenic 50.0%
! ATCCGATCGATTTCACGGAG+AGG + chr6_3:23815794-23815813 None:intergenic 50.0%
TCGGATCAGTTTCTGATGGC+GGG - chr6_3:23815808-23815827 Msa0945160:three_prime_UTR 50.0%
TCGTCCTGAACTCTGTTCAC+CGG - chr6_3:23815854-23815873 Msa0945160:three_prime_UTR 50.0%
TATGTGTCGGACACCGAACA+CGG - chr6_3:23816249-23816268 Msa0945160:intron 50.0%
ACAACCACTCACACACGATG+TGG + chr6_3:23816369-23816388 None:intergenic 50.0%
GTGTATGTGCAGCTTCGTGT+CGG - chr6_3:23817201-23817220 Msa0945160:intron 50.0%
GGTGGGAGTGGTTTACTGTT+TGG - chr6_3:23817237-23817256 Msa0945160:CDS 50.0%
TAAGCGCGCAGTAAGTCTCT+CGG - chr6_3:23817282-23817301 Msa0945160:CDS 50.0%
TTCAGCTGGTTGCCGTCTAT+TGG + chr6_3:23817716-23817735 None:intergenic 50.0%
TCACTTGCTCCCGTTGTTCT+TGG - chr6_3:23817996-23818015 Msa0945160:CDS 50.0%
TCACTCACAATTAAGGCCGG+TGG + chr6_3:23818472-23818491 None:intergenic 50.0%
AAGCCGGTCTTCAACAGTGT+AGG + chr6_3:23818630-23818649 None:intergenic 50.0%
AGCAATTGCATCAGCGAAGC+CGG + chr6_3:23818646-23818665 None:intergenic 50.0%
CACTCTCTCCAATGTGTTGG+TGG + chr6_3:23818837-23818856 None:intergenic 50.0%
CACCAACACATTGGAGAGAG+TGG - chr6_3:23818835-23818854 Msa0945160:intron 50.0%
AGCCACTCTCTCCAATGTGT+TGG + chr6_3:23818840-23818859 None:intergenic 50.0%
AGTTCCGATACCAGTTTGGG+TGG + chr6_3:23819067-23819086 None:intergenic 50.0%
GGCAGTTCCGATACCAGTTT+GGG + chr6_3:23819070-23819089 None:intergenic 50.0%
TGGCAGTTCCGATACCAGTT+TGG + chr6_3:23819071-23819090 None:intergenic 50.0%
GGAACTGCCATTGCAATTGC+TGG - chr6_3:23819081-23819100 Msa0945160:intron 50.0%
TGCCATTGCAATTGCTGGAG+TGG - chr6_3:23819086-23819105 Msa0945160:intron 50.0%
TGCCACTCCAGCAATTGCAA+TGG + chr6_3:23819091-23819110 None:intergenic 50.0%
TCGCTTCTCTTCCTCGATCT+TGG + chr6_3:23819133-23819152 None:intergenic 50.0%
! AGCAGCATAAGGCGTCAACT+TGG - chr6_3:23819254-23819273 Msa0945160:intron 50.0%
! AGCATAAGGCGTCAACTTGG+AGG - chr6_3:23819257-23819276 Msa0945160:intron 50.0%
TTTGTTGAGACGAGGGAGGG+AGG + chr6_3:23815736-23815755 None:intergenic 55.0%
!! GATGGCGGGAACCTTGTCTT+TGG - chr6_3:23815822-23815841 Msa0945160:three_prime_UTR 55.0%
AGAGCCGGTGAACAGAGTTC+AGG + chr6_3:23815861-23815880 None:intergenic 55.0%
ATTAAACGGACCTCACCCGG+CGG + chr6_3:23815934-23815953 None:intergenic 55.0%
CGGATTAAACGGACCTCACC+CGG + chr6_3:23815937-23815956 None:intergenic 55.0%
TGTTTGGTCAGCTGGACCGT+GGG - chr6_3:23817253-23817272 Msa0945160:CDS 55.0%
GACTTACTGCGCGCTTAGGA+AGG + chr6_3:23817279-23817298 None:intergenic 55.0%
GAGAGACTTACTGCGCGCTT+AGG + chr6_3:23817283-23817302 None:intergenic 55.0%
AAGGGCCTGTTGAGCAATGC+TGG - chr6_3:23817494-23817513 Msa0945160:CDS 55.0%
CGTAGCCAGCATTGCTCAAC+AGG + chr6_3:23817502-23817521 None:intergenic 55.0%
CGGGAATCAGCAACTTCAGC+TGG + chr6_3:23817730-23817749 None:intergenic 55.0%
GGGCCTACACTGTTGAAGAC+CGG - chr6_3:23818624-23818643 Msa0945160:intron 55.0%
TTGCCAACGGCATGAGTGAG+AGG + chr6_3:23818863-23818882 None:intergenic 55.0%
!! GGATGGAAGCGCCATTGGTG+AGG + chr6_3:23815773-23815792 None:intergenic 60.0%
!! GGAGAGGATGGAAGCGCCAT+TGG + chr6_3:23815778-23815797 None:intergenic 60.0%
ACCTCACCCGGCGGAATCAT+CGG + chr6_3:23815925-23815944 None:intergenic 60.0%
CAGGGGAGAGAAGGTTGCTC+CGG - chr6_3:23816014-23816033 Msa0945160:intron 60.0%
GGAGAGAAGGTTGCTCCGGT+TGG - chr6_3:23816018-23816037 Msa0945160:intron 60.0%
CTGTTTGGTCAGCTGGACCG+TGG - chr6_3:23817252-23817271 Msa0945160:CDS 60.0%
!! CCAATGTGTTGGTGGCCACC+TGG + chr6_3:23818829-23818848 None:intergenic 60.0%
CCAGGTGGCCACCAACACAT+TGG - chr6_3:23818826-23818845 Msa0945160:intron 60.0%
GCTCCTCTCACTCATGCCGT+TGG - chr6_3:23818857-23818876 Msa0945160:intron 60.0%
! AGGGAGGGAGGAGAGTGTGG+TGG + chr6_3:23815724-23815743 None:intergenic 65.0%
ACGAGGGAGGGAGGAGAGTG+TGG + chr6_3:23815727-23815746 None:intergenic 65.0%
TGCGCGCTTAGGAAGGCCCA+CGG + chr6_3:23817272-23817291 None:intergenic 65.0%
TCATCGGCAGCGGCGAGGCA+AGG + chr6_3:23815909-23815928 None:intergenic 70.0%
CGGAATCATCGGCAGCGGCG+AGG + chr6_3:23815914-23815933 None:intergenic 70.0%
GCCGCTGCCGATGATTCCGC+CGG - chr6_3:23815915-23815934 Msa0945160:three_prime_UTR 70.0%
CCCGGCGGAATCATCGGCAG+CGG + chr6_3:23815919-23815938 None:intergenic 70.0%
CCGCTGCCGATGATTCCGCC+GGG - chr6_3:23815916-23815935 Msa0945160:three_prime_UTR 70.0%
GCCGATGATTCCGCCGGGTG+AGG - chr6_3:23815921-23815940 Msa0945160:three_prime_UTR 70.0%
CAGCGGCGAGGCAAGGACGG+AGG + chr6_3:23815902-23815921 None:intergenic 75.0%
CGGCAGCGGCGAGGCAAGGA+CGG + chr6_3:23815905-23815924 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 23815549 23819684 23815549 ID=Msa0945160;Name=Msa0945160
chr6_3 mRNA 23815549 23819684 23815549 ID=Msa0945160-mRNA-1;Parent=Msa0945160;Name=Msa0945160-mRNA-1;_AED=0.08;_eAED=0.08;_QI=147|0.90|0.91|1|0.90|0.91|12|421|388
chr6_3 exon 23815549 23815987 23815549 ID=Msa0945160-mRNA-1:exon:6715;Parent=Msa0945160-mRNA-1
chr6_3 exon 23816081 23816181 23816081 ID=Msa0945160-mRNA-1:exon:6714;Parent=Msa0945160-mRNA-1
chr6_3 exon 23816304 23816403 23816304 ID=Msa0945160-mRNA-1:exon:6713;Parent=Msa0945160-mRNA-1
chr6_3 exon 23816499 23816615 23816499 ID=Msa0945160-mRNA-1:exon:6712;Parent=Msa0945160-mRNA-1
chr6_3 exon 23816750 23816827 23816750 ID=Msa0945160-mRNA-1:exon:6711;Parent=Msa0945160-mRNA-1
chr6_3 exon 23816932 23817044 23816932 ID=Msa0945160-mRNA-1:exon:6710;Parent=Msa0945160-mRNA-1
chr6_3 exon 23817216 23817311 23817216 ID=Msa0945160-mRNA-1:exon:6709;Parent=Msa0945160-mRNA-1
chr6_3 exon 23817400 23817520 23817400 ID=Msa0945160-mRNA-1:exon:6708;Parent=Msa0945160-mRNA-1
chr6_3 exon 23817942 23818020 23817942 ID=Msa0945160-mRNA-1:exon:6707;Parent=Msa0945160-mRNA-1
chr6_3 exon 23818731 23818796 23818731 ID=Msa0945160-mRNA-1:exon:6706;Parent=Msa0945160-mRNA-1
chr6_3 exon 23819181 23819216 23819181 ID=Msa0945160-mRNA-1:exon:6705;Parent=Msa0945160-mRNA-1
chr6_3 exon 23819296 23819684 23819296 ID=Msa0945160-mRNA-1:exon:6704;Parent=Msa0945160-mRNA-1
chr6_3 five_prime_UTR 23819538 23819684 23819538 ID=Msa0945160-mRNA-1:five_prime_utr;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23819296 23819537 23819296 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23819181 23819216 23819181 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23818731 23818796 23818731 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23817942 23818020 23817942 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23817400 23817520 23817400 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23817216 23817311 23817216 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23816932 23817044 23816932 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23816750 23816827 23816750 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23816499 23816615 23816499 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23816304 23816403 23816304 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23816081 23816181 23816081 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 CDS 23815970 23815987 23815970 ID=Msa0945160-mRNA-1:cds;Parent=Msa0945160-mRNA-1
chr6_3 three_prime_UTR 23815549 23815969 23815549 ID=Msa0945160-mRNA-1:three_prime_utr;Parent=Msa0945160-mRNA-1
Gene Sequence

>Msa0945160

ATGGAGTCACGAGTGTTATCACGCGCCACCACACTCTCCTCCCTCCCTCGTCTCAACAAACTTCATCGTGAACACCTCACCAATGGCGCTTCCATCCTCTCCGTGAAATCGATCGGATCAGTTTCTGATGGCGGGAACCTTGTCTTTGGAAGACAACTTCGTCCTGAACTCTGTTCACCGGCTCTTAAGAAAAGTGGTGTACTCCTCCGTCCTTGCCTCGCCGCTGCCGATGATTCCGCCGGGGGAGAGAAGGTTGCTCCGGTTGGATTCTTTAGCAAGTACTTTTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTATAATTATTTCCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTGGTGGGAGTGGTTTACTGTTTGGTCAGCTGGACCGTGGGCCTTCCTAAGCGCGCACCAATAGACGGCAACCAGCTGAAGTTGCTGATTCCCGTAGCTGTGTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATCAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAATTCATACTTGGACAATCAATTCCCATCACTCTATGGCTCTCACTTGCTCCCGTTGTTCTTGGTGTGTCGTTGGCATCATTGACTGAGCTCTCATTCAATTGGCTCGGCTTCATAAGTGCTATGATTTCAAACATTTCATTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGACAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCACCGGCCTTAATTATTGAAGGGCCTACACTGTTGAAGACCGGCTTCGCTGATGCAATTGCTAAAGTAGGTTTGGTCAAATTCGTATCAGATCTCTTCTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACCAACACATTGGAGAGAGTGGCTCCTCTCACTCATGCCGTTGGCAACGTACTCAAACGTGTATTTGTCATTGGATTTTCAATCATTATCTTCGGTAACAAGATTTCCACCCAAACTGGTATCGGAACTGCCATTGCAATTGCTGGAGTGGCACTCTACTCCTTCATCAAAGCCAAGATCGAGGAAGAGAAGCGACAAGCAAAAGCAGCATAA

Protein sequence

>Msa0945160

MESRVLSRATTLSSLPRLNKLHREHLTNGASILSVKSIGSVSDGGNLVFGRQLRPELCSPALKKSGVLLRPCLAAADDSAGGEKVAPVGFFSKYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPKRAPIDGNQLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIIEGPTLLKTGFADAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKIEEEKRQAKAA*