AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0255770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0255770 MtrunA17_Chr2g0316751 86.207 290 12 5 1 281 1 271 8.38e-163 452
Msa0255770 MtrunA17_Chr6g0466691 43.902 287 122 10 1 281 1 254 5.81e-60 191
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0255770 AT3G15110.1 48.311 296 106 10 1 279 1 266 8.26e-72 222

Find 118 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTCTATTACTTTATTC+TGG 0.186217 2_2:-50065008 Msa0255770:CDS
AAGAGTAAAATATTAAAATT+TGG 0.187707 2_2:+50061061 None:intergenic
TCTTGATGTGTTTGCTTTGA+AGG 0.254074 2_2:-50061042 Msa0255770:three_prime_UTR
ACATGATATTTATTTGGATT+TGG 0.256586 2_2:-50069188 Msa0255770:five_prime_UTR
CTTCTGTTCTGTGTGGCTTT+TGG 0.261733 2_2:+50069214 None:intergenic
AAGTCCACATGATATTTATT+TGG 0.262672 2_2:-50069194 Msa0255770:five_prime_UTR
CTTGCCCTCAAATCCTTTAC+AGG 0.263398 2_2:-50064981 Msa0255770:CDS
CGGTGAGCTAAATATATTAA+AGG 0.315793 2_2:+50060925 None:intergenic
CGAAGTTGAAGTTGAGGAAT+AGG 0.316138 2_2:-50064805 Msa0255770:intron
ATGCTTTGAACTCTGTTTAT+CGG 0.326456 2_2:-50061155 Msa0255770:three_prime_UTR
AACCGTTTGTTTGAGACGTT+TGG 0.335429 2_2:+50068731 None:intergenic
ACCTTACGGTGATTGTTATC+TGG 0.349282 2_2:+50065168 None:intergenic
CACCTGTTCAAGCATTTCTC+GGG 0.359534 2_2:-50067567 Msa0255770:CDS
TCACCTGTTCAAGCATTTCT+CGG 0.367357 2_2:-50067568 Msa0255770:CDS
AGAGAAGGAGTAGAATCATA+TGG 0.370898 2_2:+50068855 None:intergenic
GTAATAGACCAAGGGAGTTT+AGG 0.372952 2_2:+50065018 None:intergenic
CTCTGTTTATCGGTGACAAA+AGG 0.390651 2_2:-50061145 Msa0255770:three_prime_UTR
TACAGGAGATTCAATTGAAA+AGG 0.399678 2_2:-50064964 Msa0255770:CDS
TCTTCCGCTCCTTCCGCCGC+AGG 0.403419 2_2:-50068755 Msa0255770:CDS
GGAGAACACTAGCAGCGATT+TGG 0.415238 2_2:+50068802 None:intergenic
GTCAGTAAAGGAAGAAGCAT+TGG 0.416654 2_2:-50067644 Msa0255770:CDS
AATCATCTGAAATTGTTTGC+CGG 0.417137 2_2:+50067476 None:intergenic
AAGGCTGTAAAACTAGAGTT+TGG 0.425501 2_2:+50061226 None:intergenic
TTCAATTGAATCTCCTGTAA+AGG 0.432495 2_2:+50064968 None:intergenic
CACTCACTCATCCATCAGAT+TGG 0.441697 2_2:+50069110 None:intergenic
TAAGAGTGGGATGGGAAGGT+GGG 0.442269 2_2:+50069034 None:intergenic
TGCGGCGGAAGGAGCGGAAG+AGG 0.447068 2_2:+50068757 None:intergenic
GCCCCGAGAAATGCTTGAAC+AGG 0.450986 2_2:+50067565 None:intergenic
ATCTCCTGTAAAGGATTTGA+GGG 0.451245 2_2:+50064977 None:intergenic
ATTGGAGACTTTGAAAGCTA+TGG 0.451641 2_2:-50067626 Msa0255770:CDS
GCTCAGACCCGCCTCGATGA+TGG 0.451902 2_2:+50067498 None:intergenic
TTGGAGACTTTGAAAGCTAT+GGG 0.454281 2_2:-50067625 Msa0255770:CDS
AATCTCCTGTAAAGGATTTG+AGG 0.457712 2_2:+50064976 None:intergenic
TTTCACAGGACGATAATAAA+CGG 0.459521 2_2:-50065071 Msa0255770:intron
GGTTTATGTTTGTGTAAGAG+TGG 0.464093 2_2:+50069020 None:intergenic
GAAGGTGGGGTGAGAAGAGA+AGG 0.482855 2_2:+50069048 None:intergenic
TCATCGAGGCGGGTCTGAGC+CGG 0.484689 2_2:-50067495 Msa0255770:CDS
TACGGTGATTGTTATCTGGC+GGG 0.486528 2_2:+50065172 None:intergenic
GTAAGAGTGGGATGGGAAGG+TGG 0.489154 2_2:+50069033 None:intergenic
GAGAAGGAGTAGAATCATAT+GGG 0.494622 2_2:+50068856 None:intergenic
GAAGGAGCGGAAGAGGAGGA+CGG 0.500736 2_2:+50068764 None:intergenic
ACGTTTGGCCCTGCGGCGGA+AGG 0.501742 2_2:+50068746 None:intergenic
GAATCATATGGGATTTCAAT+GGG 0.507790 2_2:+50068867 None:intergenic
ATAGTCTGATAGATATATGT+GGG 0.511235 2_2:-50069253 None:intergenic
TTTGTTCTGTGGAGAAAAGA+GGG 0.511734 2_2:+50068999 None:intergenic
TGGCCCTGCGGCGGAAGGAG+CGG 0.512848 2_2:+50068751 None:intergenic
ACGATGCACAGTAGTACTAC+TGG 0.515096 2_2:-50064836 Msa0255770:exon
GTTCCTCCCTCCCAATCTGA+TGG 0.515624 2_2:-50069121 Msa0255770:five_prime_UTR
GTCATTTGTGCGAGTCTCAA+CGG 0.516700 2_2:+50064896 None:intergenic
GCAGCGATTTGGATGAAAGA+AGG 0.516847 2_2:+50068813 None:intergenic
AGAATCATATGGGATTTCAA+TGG 0.519315 2_2:+50068866 None:intergenic
CAACTTCATCATCATTCACA+TGG 0.523485 2_2:-50068935 Msa0255770:CDS
TCTGTTTATCGGTGACAAAA+GGG 0.524908 2_2:-50061144 Msa0255770:three_prime_UTR
ATGGCTGAAATTGAGAAAGA+AGG 0.525166 2_2:+50068969 None:intergenic
CTTCCGCTCCTTCCGCCGCA+GGG 0.525461 2_2:-50068754 Msa0255770:CDS
TGTTTGTGTAAGAGTGGGAT+GGG 0.527485 2_2:+50069026 None:intergenic
TGACAAAAGGGATAGGGAAA+AGG 0.529685 2_2:-50061132 Msa0255770:three_prime_UTR
ACTCACTCATCCATCAGATT+GGG 0.529979 2_2:+50069111 None:intergenic
GGCCAAACGTCTCAAACAAA+CGG 0.532765 2_2:-50068733 Msa0255770:intron
TCCATCTGTTGTGATTGTTG+TGG 0.537652 2_2:+50068899 None:intergenic
ATGTTTGTGTAAGAGTGGGA+TGG 0.539648 2_2:+50069025 None:intergenic
TTATCGGTGACAAAAGGGAT+AGG 0.539737 2_2:-50061139 Msa0255770:three_prime_UTR
TTCGCCACCATCATCGAGGC+GGG 0.539823 2_2:-50067505 Msa0255770:CDS
TGAAATTGAGAAAGAAGGAG+TGG 0.539921 2_2:+50068974 None:intergenic
GGCGGAAGGAGCGGAAGAGG+AGG 0.540765 2_2:+50068760 None:intergenic
ATGACGCTGAATTGAGCGGC+AGG 0.543051 2_2:-50064878 Msa0255770:CDS
GATAGTCTGATAGATATATG+TGG 0.543144 2_2:-50069254 None:intergenic
AATATATTTAGCTCACCGAT+TGG 0.544492 2_2:-50060920 None:intergenic
AATCAAATTATGTTAGTATG+AGG 0.545531 2_2:-50060961 Msa0255770:three_prime_UTR
GTTTATGTTTGTGTAAGAGT+GGG 0.551220 2_2:+50069021 None:intergenic
TTCAGGAGAGAAGTCAGTAA+AGG 0.553365 2_2:-50067656 Msa0255770:CDS
TAAAGGATTTGAGGGCAAGT+TGG 0.554111 2_2:+50064985 None:intergenic
TGTGTAAGAGTGGGATGGGA+AGG 0.555031 2_2:+50069030 None:intergenic
ACCACAACAATCACAACAGA+TGG 0.556667 2_2:-50068900 Msa0255770:CDS
GAGACTATCATTGAGAAAAG+AGG 0.557742 2_2:-50061184 Msa0255770:three_prime_UTR
ATCACAACAGATGGAGGAGA+TGG 0.559223 2_2:-50068891 Msa0255770:CDS
GTAGTACTACTGTGCATCGT+TGG 0.559331 2_2:+50064839 None:intergenic
GTATAGCGAAGTTGAAGTTG+AGG 0.564014 2_2:-50064811 Msa0255770:three_prime_UTR
TATCGGTGACAAAAGGGATA+GGG 0.567105 2_2:-50061138 Msa0255770:three_prime_UTR
TTTCTCGGGGCAATATCAGC+TGG 0.567839 2_2:-50067553 Msa0255770:CDS
TCAGTGGAGGAGAGAAGAGA+AGG 0.568555 2_2:+50068840 None:intergenic
GCTGCTAGTGTTCTCCTCAC+CGG 0.569698 2_2:-50068795 Msa0255770:CDS
CACTCATCCATCAGATTGGG+AGG 0.570432 2_2:+50069114 None:intergenic
CAGCGATTTGGATGAAAGAA+GGG 0.577029 2_2:+50068814 None:intergenic
CGCAGCACAATCAATTCCCA+AGG 0.581775 2_2:+50061207 None:intergenic
AGAAATGCTTGAACAGGTGA+AGG 0.583226 2_2:+50067571 None:intergenic
TTACGGTGATTGTTATCTGG+CGG 0.589706 2_2:+50065171 None:intergenic
GATGATGAAGTTGAAAGAGA+AGG 0.590191 2_2:+50068945 None:intergenic
GCTTCAATAGAGACTACTAA+AGG 0.596943 2_2:-50067598 Msa0255770:CDS
CAGAATAAAGTAATAGACCA+AGG 0.597017 2_2:+50065009 None:intergenic
CATCCATCAGATTGGGAGGG+AGG 0.597633 2_2:+50069118 None:intergenic
AATGCTTGAACAGGTGAAGG+TGG 0.599999 2_2:+50067574 None:intergenic
TGAAGTTGAAAGAGAAGGAA+TGG 0.606886 2_2:+50068950 None:intergenic
TGAGACGTTTGGCCCTGCGG+CGG 0.608364 2_2:+50068742 None:intergenic
AAATCCAAATAAATATCATG+TGG 0.610604 2_2:+50069190 None:intergenic
GTTTGAGACGTTTGGCCCTG+CGG 0.615148 2_2:+50068739 None:intergenic
GCCAGATAACAATCACCGTA+AGG 0.617221 2_2:-50065169 Msa0255770:intron
CAGACCCGCCTCGATGATGG+TGG 0.620049 2_2:+50067501 None:intergenic
GGAGGAACAACAACAAACAT+TGG 0.620707 2_2:+50069136 None:intergenic
GAGGAGGACGGAAATAGCAC+CGG 0.620911 2_2:+50068776 None:intergenic
AGAATAAAGTAATAGACCAA+GGG 0.626373 2_2:+50065010 None:intergenic
GAAATTGAGAAAGAAGGAGT+GGG 0.626589 2_2:+50068975 None:intergenic
ACCTGTTCAAGCATTTCTCG+GGG 0.627536 2_2:-50067566 Msa0255770:CDS
AAGAGTGGGATGGGAAGGTG+GGG 0.628032 2_2:+50069035 None:intergenic
GAAAGAAGGGTCATCAGTGG+AGG 0.631336 2_2:+50068827 None:intergenic
ACAACAATCACAACAGATGG+AGG 0.634223 2_2:-50068897 Msa0255770:CDS
GATGAAAGAAGGGTCATCAG+TGG 0.636441 2_2:+50068824 None:intergenic
ACAAATGACGCTGAATTGAG+CGG 0.644286 2_2:-50064882 Msa0255770:CDS
ATGTGGACTTCTGTTCTGTG+TGG 0.658149 2_2:+50069207 None:intergenic
TAGTCTGATAGATATATGTG+GGG 0.666329 2_2:-50069252 None:intergenic
CTTGGGAATTGATTGTGCTG+CGG 0.670562 2_2:-50061206 Msa0255770:three_prime_UTR
ACTCATCCATCAGATTGGGA+GGG 0.671167 2_2:+50069115 None:intergenic
GTTCGCCACCATCATCGAGG+CGG 0.686352 2_2:-50067506 Msa0255770:CDS
GGACGGAAATAGCACCGGTG+AGG 0.690490 2_2:+50068781 None:intergenic
TAAGTTCGCCACCATCATCG+AGG 0.692160 2_2:-50067509 Msa0255770:CDS
TGGAGACTTTGAAAGCTATG+GGG 0.694173 2_2:-50067624 Msa0255770:CDS
AGTCTGATAGATATATGTGG+GGG 0.713139 2_2:-50069251 None:intergenic
GGGGTGAGAAGAGAAGGTTG+TGG 0.774274 2_2:+50069054 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTAAATTTGAATAATTA+CGG + chr2_2:50064024-50064043 None:intergenic 10.0%
!!! TTTTTAATATTAAAAGTTTG+CGG - chr2_2:50068434-50068453 Msa0255770:intron 10.0%
!! AAGAGTAAAATATTAAAATT+TGG + chr2_2:50069105-50069124 None:intergenic 10.0%
!! AAAAGAGAGAATTAAAATTT+AGG + chr2_2:50061828-50061847 None:intergenic 15.0%
!!! TTTTAATTCTCTCTTTTATT+TGG - chr2_2:50061831-50061850 Msa0255770:intron 15.0%
!! CTTCAATAATTACATATTAA+TGG + chr2_2:50061864-50061883 None:intergenic 15.0%
!! AATAATGATCATGTTTATAA+TGG - chr2_2:50063075-50063094 Msa0255770:intron 15.0%
!! ATAATGATCATGTTTATAAT+GGG - chr2_2:50063076-50063095 Msa0255770:intron 15.0%
!!! TATTTAAAATGTTTTGATTG+TGG - chr2_2:50063848-50063867 Msa0255770:intron 15.0%
!! GTATTTAAATAATAGCTAAT+TGG + chr2_2:50064605-50064624 None:intergenic 15.0%
!! GATCATAAATTTATGTTAAT+TGG - chr2_2:50065963-50065982 Msa0255770:intron 15.0%
!! AGAAAAAGTTAAAATAAACA+CGG + chr2_2:50067238-50067257 None:intergenic 15.0%
!! TTCATGTTTGTAATATAAAT+TGG - chr2_2:50067730-50067749 Msa0255770:intron 15.0%
!!! CTTTCTTTTGTAATATAAAA+TGG - chr2_2:50067818-50067837 Msa0255770:intron 15.0%
!!! AGCAAATATATCAATTTTTT+TGG - chr2_2:50068030-50068049 Msa0255770:intron 15.0%
!! TATATATGTAAAAAAAGGTT+AGG + chr2_2:50068126-50068145 None:intergenic 15.0%
!!! TTTTAATATTAAAAGTTTGC+GGG - chr2_2:50068435-50068454 Msa0255770:intron 15.0%
!!! CTCATAATTTGAATTTTTTT+GGG + chr2_2:50069173-50069192 None:intergenic 15.0%
!!! ACTCATAATTTGAATTTTTT+TGG + chr2_2:50069174-50069193 None:intergenic 15.0%
!! AAATCCAAATAAATATCATG+TGG + chr2_2:50060976-50060995 None:intergenic 20.0%
!! ACATGATATTTATTTGGATT+TGG - chr2_2:50060975-50060994 Msa0255770:three_prime_UTR 20.0%
!!! TTTAGTCATTTTAAAAACCT+TGG + chr2_2:50061649-50061668 None:intergenic 20.0%
!!! ATGATCACTCTTTTTAATAT+AGG - chr2_2:50062137-50062156 Msa0255770:intron 20.0%
!!! TGATCACTCTTTTTAATATA+GGG - chr2_2:50062138-50062157 Msa0255770:intron 20.0%
!!! TCATCTCTTGAAAATTTTAT+TGG - chr2_2:50063107-50063126 Msa0255770:intron 20.0%
!! GAATGAGTAATTAATCTAAA+GGG + chr2_2:50063333-50063352 None:intergenic 20.0%
!! AGAATGAGTAATTAATCTAA+AGG + chr2_2:50063334-50063353 None:intergenic 20.0%
!!! TTCTGAAATTTTTTTCTTCA+TGG - chr2_2:50063350-50063369 Msa0255770:intron 20.0%
!! AATACAAATCGACATTAAAT+AGG + chr2_2:50063679-50063698 None:intergenic 20.0%
!! AGAAAGAGTTAGATATTAAA+TGG - chr2_2:50063888-50063907 Msa0255770:intron 20.0%
!! GAAAGAGTTAGATATTAAAT+GGG - chr2_2:50063889-50063908 Msa0255770:intron 20.0%
!!! TGCAAAAAAGTAATACATTT+TGG + chr2_2:50064229-50064248 None:intergenic 20.0%
!!! ATGTTAGACATTTTAAAAAC+TGG - chr2_2:50064498-50064517 Msa0255770:intron 20.0%
!! TGTCAATGATTATTTATTGT+TGG - chr2_2:50064671-50064690 Msa0255770:intron 20.0%
!! AGAGTATATGAAAAAATTGA+AGG + chr2_2:50065533-50065552 None:intergenic 20.0%
!!! TTTTGTAGCTTCTAAAAAAT+CGG - chr2_2:50065838-50065857 Msa0255770:intron 20.0%
!!! AATAACTTTTTTACAAGTGA+AGG - chr2_2:50065941-50065960 Msa0255770:intron 20.0%
!! TATTCAAAATCAATTCTTGT+CGG + chr2_2:50066539-50066558 None:intergenic 20.0%
!!! AAATTCAACTCTTTTTTAAC+TGG + chr2_2:50066570-50066589 None:intergenic 20.0%
!!! AAATTAATCTTTTAGAAGAG+TGG - chr2_2:50066916-50066935 Msa0255770:intron 20.0%
!! AGATTCTATATATTCAACTT+TGG + chr2_2:50067204-50067223 None:intergenic 20.0%
!! TTGCAATTTGAATTTACAAA+TGG - chr2_2:50067281-50067300 Msa0255770:intron 20.0%
!!! AATGGATTAAAACATTTTTC+TGG - chr2_2:50067299-50067318 Msa0255770:intron 20.0%
!!! ATTAAAACATTTTTCTGGAT+AGG - chr2_2:50067304-50067323 Msa0255770:intron 20.0%
!!! ACTACAATAATTTTCAACTA+GGG + chr2_2:50067574-50067593 None:intergenic 20.0%
!!! TACTACAATAATTTTCAACT+AGG + chr2_2:50067575-50067594 None:intergenic 20.0%
!! AAGTAAATAAAGCAAAAGAA+AGG + chr2_2:50067766-50067785 None:intergenic 20.0%
!! TTCATGTTTGTAAATTCAAA+TGG + chr2_2:50067852-50067871 None:intergenic 20.0%
!!! TACAACAATAATTTTCAACT+AGG - chr2_2:50068007-50068026 Msa0255770:intron 20.0%
!!! ATATCAATTTTTTTGGTCAT+AGG - chr2_2:50068037-50068056 Msa0255770:intron 20.0%
!!! TATCAATTTTTTTGGTCATA+GGG - chr2_2:50068038-50068057 Msa0255770:intron 20.0%
!! AGAATGTTAAAATTCAAAAG+AGG - chr2_2:50068722-50068741 Msa0255770:intron 20.0%
!! GTACCTATATAAATTACATT+GGG - chr2_2:50068744-50068763 Msa0255770:CDS 20.0%
!! ATACCCAATGTAATTTATAT+AGG + chr2_2:50068750-50068769 None:intergenic 20.0%
!! ATTCAAATGTGTTTATCAAA+AGG - chr2_2:50068819-50068838 Msa0255770:CDS 20.0%
!! AATCAAATTATGTTAGTATG+AGG - chr2_2:50069202-50069221 Msa0255770:five_prime_UTR 20.0%
! AAGTCCACATGATATTTATT+TGG - chr2_2:50060969-50060988 Msa0255770:three_prime_UTR 25.0%
! GATAATCTCATTCTCAATTA+AGG - chr2_2:50061560-50061579 Msa0255770:intron 25.0%
!!! AAATGTGTAAAGCTTTGTTT+TGG - chr2_2:50061801-50061820 Msa0255770:intron 25.0%
! TTATACTACATCATACAACT+CGG + chr2_2:50061917-50061936 None:intergenic 25.0%
! AAAGCTAGTTCAAAAAATGA+GGG + chr2_2:50061953-50061972 None:intergenic 25.0%
!!! TCATTTTTTGAACTAGCTTT+CGG - chr2_2:50061953-50061972 Msa0255770:intron 25.0%
! CTATAGTTCAAAGACAAAAT+AGG - chr2_2:50062083-50062102 Msa0255770:intron 25.0%
!! TTTGTTTGTGTTGAAGTTTT+AGG - chr2_2:50062405-50062424 Msa0255770:intron 25.0%
!! TTGTTTGTGTTGAAGTTTTA+GGG - chr2_2:50062406-50062425 Msa0255770:intron 25.0%
!!! CATTGAAATGAGTTTTTTTG+TGG - chr2_2:50062467-50062486 Msa0255770:intron 25.0%
! TGCAAACAAAAAAACAGATA+CGG + chr2_2:50062747-50062766 None:intergenic 25.0%
! TGTTAAGTTTGAATCAGATA+AGG - chr2_2:50062772-50062791 Msa0255770:intron 25.0%
!! TTAACTGTGTTGTTAAATAG+CGG - chr2_2:50062854-50062873 Msa0255770:intron 25.0%
! GTTACTTAGCTTAATACTAA+TGG - chr2_2:50063129-50063148 Msa0255770:intron 25.0%
! ACACTTTGATCAAATATATC+CGG + chr2_2:50063559-50063578 None:intergenic 25.0%
! TTGCAAACTTTAGATTATCT+TGG + chr2_2:50063638-50063657 None:intergenic 25.0%
! CCTGATTAATTAATATCCAA+TGG + chr2_2:50063780-50063799 None:intergenic 25.0%
! CCATTGGATATTAATTAATC+AGG - chr2_2:50063777-50063796 Msa0255770:intron 25.0%
!! TTTTAAATAGACTCACATGA+TGG + chr2_2:50063837-50063856 None:intergenic 25.0%
!!! TTTTATTTTGAATGCATTCC+TGG - chr2_2:50063941-50063960 Msa0255770:intron 25.0%
! TCGTGAATGAAACATAAAAT+AGG + chr2_2:50064189-50064208 None:intergenic 25.0%
!!! AAGTAATACATTTTGGAAAC+TGG + chr2_2:50064222-50064241 None:intergenic 25.0%
! ATGGTTATGTGATATTGTTT+AGG - chr2_2:50064290-50064309 Msa0255770:intron 25.0%
! AATTGTGGATTTAGAAATGT+AGG - chr2_2:50064529-50064548 Msa0255770:intron 25.0%
! AAATGTAGGTATCAAAATTG+TGG - chr2_2:50064543-50064562 Msa0255770:intron 25.0%
!! ATAGCTAATTGGCTTAAATA+CGG + chr2_2:50064594-50064613 None:intergenic 25.0%
! ACCATTATACTGTTAGATTA+TGG + chr2_2:50064959-50064978 None:intergenic 25.0%
! AAAAATAAATGTTGCAAGGT+AGG + chr2_2:50065123-50065142 None:intergenic 25.0%
!!! TACCTTGCAACATTTATTTT+TGG - chr2_2:50065122-50065141 Msa0255770:intron 25.0%
! AGAATAAAGTAATAGACCAA+GGG + chr2_2:50065156-50065175 None:intergenic 25.0%
!!! TTTTTTCAGAAGTAGTTCTT+GGG + chr2_2:50065438-50065457 None:intergenic 25.0%
! TCACATATAGCAAAAAATAG+TGG - chr2_2:50065592-50065611 Msa0255770:intron 25.0%
!! TTTGTAGCTTCTAAAAAATC+GGG - chr2_2:50065839-50065858 Msa0255770:intron 25.0%
! GTGAAAGACTATAAATATCA+AGG + chr2_2:50066033-50066052 None:intergenic 25.0%
! TATTTATAGTCTTTCACTGT+TGG - chr2_2:50066036-50066055 Msa0255770:intron 25.0%
! AGTATTAAATGAAAGACAGA+AGG + chr2_2:50066163-50066182 None:intergenic 25.0%
! ATGATGATTTAACATGTGAT+TGG + chr2_2:50066248-50066267 None:intergenic 25.0%
! TAAAATACTAAAACTGCCAA+AGG + chr2_2:50066302-50066321 None:intergenic 25.0%
! ATACAATACAAGAAAAAGCT+AGG + chr2_2:50066446-50066465 None:intergenic 25.0%
!! CTTTTTCTTGTATTGTATTG+TGG - chr2_2:50066448-50066467 Msa0255770:intron 25.0%
!! CTTTTGTCTTCATGTATTAT+TGG - chr2_2:50066506-50066525 Msa0255770:intron 25.0%
! ATTCAAAATCAATTCTTGTC+GGG + chr2_2:50066538-50066557 None:intergenic 25.0%
!! AATTGATTCTACTTAAAGCT+AGG + chr2_2:50066663-50066682 None:intergenic 25.0%
!! GCTTTAAGTAGAATCAATTA+TGG - chr2_2:50066664-50066683 Msa0255770:intron 25.0%
! TTAAGTAGAATCAATTATGG+AGG - chr2_2:50066667-50066686 Msa0255770:intron 25.0%
! AGAATTAATTCTGACATGTT+TGG + chr2_2:50066718-50066737 None:intergenic 25.0%
!!! ATAGGTTTTTATTTTGTGTG+TGG - chr2_2:50067322-50067341 Msa0255770:intron 25.0%
!! AAACTTTTTGATGAGAAGAT+TGG + chr2_2:50067447-50067466 None:intergenic 25.0%
! AGTGAACTCTACATTTAATT+TGG - chr2_2:50067681-50067700 Msa0255770:intron 25.0%
! TATATTACAAACATGCCATT+TGG + chr2_2:50067791-50067810 None:intergenic 25.0%
!!! ATCAATTTTTTTGGTCATAG+GGG - chr2_2:50068039-50068058 Msa0255770:intron 25.0%
! AAGGAATCTTGACTTAAAAA+AGG + chr2_2:50068096-50068115 None:intergenic 25.0%
! TCATTTAAGTACCCAAAAAT+GGG + chr2_2:50068268-50068287 None:intergenic 25.0%
!! GTTATTGATAGTTGATTAGT+GGG + chr2_2:50068393-50068412 None:intergenic 25.0%
!! AGTTATTGATAGTTGATTAG+TGG + chr2_2:50068394-50068413 None:intergenic 25.0%
!!! TCAATTGGGGAATTTTTTTT+GGG + chr2_2:50068512-50068531 None:intergenic 25.0%
! GGTACCTATATAAATTACAT+TGG - chr2_2:50068743-50068762 Msa0255770:CDS 25.0%
!!! ATTTGTTTTCTTTTTGTCGT+TGG - chr2_2:50068863-50068882 Msa0255770:CDS 25.0%
!! TTTTTCTCTTTCTTTGCAAT+AGG + chr2_2:50068901-50068920 None:intergenic 25.0%
GTTTATGTTTGTGTAAGAGT+GGG + chr2_2:50061145-50061164 None:intergenic 30.0%
GAATCATATGGGATTTCAAT+GGG + chr2_2:50061299-50061318 None:intergenic 30.0%
AGAATCATATGGGATTTCAA+TGG + chr2_2:50061300-50061319 None:intergenic 30.0%
ATAACATGAATTGTGACACT+TGG + chr2_2:50061615-50061634 None:intergenic 30.0%
TGTTATGTTATGTTACACCA+AGG - chr2_2:50061629-50061648 Msa0255770:intron 30.0%
AAGAATATGAGTTCAATTCC+TGG - chr2_2:50061729-50061748 Msa0255770:intron 30.0%
AGAATATGAGTTCAATTCCT+GGG - chr2_2:50061730-50061749 Msa0255770:intron 30.0%
ACAATTCTTGACCAAAGAAA+TGG - chr2_2:50061757-50061776 Msa0255770:intron 30.0%
TTGTTAACCTTCCATTTCTT+TGG + chr2_2:50061771-50061790 None:intergenic 30.0%
TATACTACATCATACAACTC+GGG + chr2_2:50061916-50061935 None:intergenic 30.0%
GAAAGCTAGTTCAAAAAATG+AGG + chr2_2:50061954-50061973 None:intergenic 30.0%
!!! CATTTTTTGAACTAGCTTTC+GGG - chr2_2:50061954-50061973 Msa0255770:intron 30.0%
!!! ATTTTTTGAACTAGCTTTCG+GGG - chr2_2:50061955-50061974 Msa0255770:intron 30.0%
!! TCCTATTTTAGAAGTAACTG+AGG - chr2_2:50062006-50062025 Msa0255770:intron 30.0%
!! CCTATTTTAGAAGTAACTGA+GGG - chr2_2:50062007-50062026 Msa0255770:intron 30.0%
AAAAGAGTGATCATTCGATT+TGG + chr2_2:50062131-50062150 None:intergenic 30.0%
! TTTTAATATAGGGCTGCATA+AGG - chr2_2:50062148-50062167 Msa0255770:intron 30.0%
TTGTGATCCTTGATATATCA+AGG + chr2_2:50062243-50062262 None:intergenic 30.0%
TCCTCATCATAAGAAATGTA+AGG - chr2_2:50062324-50062343 Msa0255770:intron 30.0%
!!! TTTTGTGGTTTTAGCAATTC+AGG - chr2_2:50062482-50062501 Msa0255770:intron 30.0%
! AATCATCTGAAATTGTTTGC+CGG + chr2_2:50062690-50062709 None:intergenic 30.0%
AAAAAACAGATACGGCTAAA+AGG + chr2_2:50062739-50062758 None:intergenic 30.0%
! ATAACTGTGAGGTTTTTCTT+TGG + chr2_2:50062820-50062839 None:intergenic 30.0%
AAAACCTCACAGTTATGAAT+TGG - chr2_2:50062824-50062843 Msa0255770:intron 30.0%
GAGTACATGACATTAATAAC+CGG + chr2_2:50063044-50063063 None:intergenic 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr2_2:50063229-50063248 Msa0255770:intron 30.0%
!!! TGTTGTTGTTGTTGTTGTTT+TGG - chr2_2:50063451-50063470 Msa0255770:intron 30.0%
!!! TTGTTTTGGTATGTTCTTCA+TGG - chr2_2:50063465-50063484 Msa0255770:intron 30.0%
CACTTTGATCAAATATATCC+GGG + chr2_2:50063558-50063577 None:intergenic 30.0%
! CTTTGGTTCCAATGTATAAA+TGG + chr2_2:50063807-50063826 None:intergenic 30.0%
!! TAATACATTTTGGAAACTGG+AGG + chr2_2:50064219-50064238 None:intergenic 30.0%
!!! TTTTTTGCAACCTAAGCATT+TGG - chr2_2:50064240-50064259 Msa0255770:intron 30.0%
! TTTTTGCAACCTAAGCATTT+GGG - chr2_2:50064241-50064260 Msa0255770:intron 30.0%
! AAACTGGAGTATCAAAATTG+TGG - chr2_2:50064514-50064533 Msa0255770:intron 30.0%
TACAATCTAATGACCACTAT+AGG + chr2_2:50064860-50064879 None:intergenic 30.0%
GCCATAATCTAACAGTATAA+TGG - chr2_2:50064955-50064974 Msa0255770:CDS 30.0%
! AGTATAATGGTATGCTTTTC+AGG - chr2_2:50064968-50064987 Msa0255770:CDS 30.0%
CTTCGATATCTTATCAATCA+GGG - chr2_2:50065020-50065039 Msa0255770:CDS 30.0%
TTCGATATCTTATCAATCAG+GGG - chr2_2:50065021-50065040 Msa0255770:CDS 30.0%
TCCTGTGAAAAATTGTTAGA+GGG + chr2_2:50065082-50065101 None:intergenic 30.0%
TTTCACAGGACGATAATAAA+CGG - chr2_2:50065092-50065111 Msa0255770:intron 30.0%
CAGAATAAAGTAATAGACCA+AGG + chr2_2:50065157-50065176 None:intergenic 30.0%
CTTGGTCTATTACTTTATTC+TGG - chr2_2:50065155-50065174 Msa0255770:intron 30.0%
TTCAATTGAATCTCCTGTAA+AGG + chr2_2:50065198-50065217 None:intergenic 30.0%
TACAGGAGATTCAATTGAAA+AGG - chr2_2:50065199-50065218 Msa0255770:intron 30.0%
!!! CTTTTTTCAGAAGTAGTTCT+TGG + chr2_2:50065439-50065458 None:intergenic 30.0%
TACAAAGTGATGTCAAATAG+TGG + chr2_2:50065649-50065668 None:intergenic 30.0%
CATCACTTTGTAATAAATCG+TGG - chr2_2:50065657-50065676 Msa0255770:intron 30.0%
CATTTAGTGTAATCAAACAG+TGG + chr2_2:50065742-50065761 None:intergenic 30.0%
! TTGTAGCTTCTAAAAAATCG+GGG - chr2_2:50065840-50065859 Msa0255770:intron 30.0%
! GCTTTTGAACAGAAGAAATT+GGG + chr2_2:50065882-50065901 None:intergenic 30.0%
!!! TTGGTTAGCTTTTAGTTTAC+AGG + chr2_2:50065995-50066014 None:intergenic 30.0%
GTTACTGTTGAATCTATGAA+AGG - chr2_2:50066101-50066120 Msa0255770:intron 30.0%
AAGGTTAAAGAGGAAAACAT+GGG + chr2_2:50066144-50066163 None:intergenic 30.0%
ATTTAACATGTGATTGGTGA+GGG + chr2_2:50066242-50066261 None:intergenic 30.0%
ATGTTAAATCATCATTGCCA+AGG - chr2_2:50066253-50066272 Msa0255770:intron 30.0%
ATAATAATAGCTCACACGAA+TGG - chr2_2:50066391-50066410 Msa0255770:intron 30.0%
AGACAAAAGTCTATACAGTT+GGG + chr2_2:50066495-50066514 None:intergenic 30.0%
AAGACAAAAGTCTATACAGT+TGG + chr2_2:50066496-50066515 None:intergenic 30.0%
TTCAAAATCAATTCTTGTCG+GGG + chr2_2:50066537-50066556 None:intergenic 30.0%
! TCTCTAGCTTCTAAAAATCA+CGG + chr2_2:50067084-50067103 None:intergenic 30.0%
TTTGATGAGAAGATTGGAAA+TGG + chr2_2:50067441-50067460 None:intergenic 30.0%
!! AAAACAGCATTTAAGTTGGT+AGG + chr2_2:50067495-50067514 None:intergenic 30.0%
GAGAAAAACAGCATTTAAGT+TGG + chr2_2:50067499-50067518 None:intergenic 30.0%
!! ATCAATCTTTTTGGTCATAG+AGG + chr2_2:50067543-50067562 None:intergenic 30.0%
! GACAGGTATATCAATCTTTT+TGG + chr2_2:50067552-50067571 None:intergenic 30.0%
! AATAATTTTCAACTAGGGAC+AGG + chr2_2:50067569-50067588 None:intergenic 30.0%
CCAAATGAAAAGAAGAACAA+GGG + chr2_2:50067980-50067999 None:intergenic 30.0%
GCAGAAGATTGTTGAAAAAA+AGG + chr2_2:50067634-50067653 None:intergenic 30.0%
!! GCTTTATTTACTTCACCAAA+TGG - chr2_2:50067773-50067792 Msa0255770:intron 30.0%
AGTGAGCTCTACATTTAATT+TGG + chr2_2:50067901-50067920 None:intergenic 30.0%
CCAAATGAAAAGAAGAACAA+GGG - chr2_2:50067980-50067999 Msa0255770:intron 30.0%
AAAAAGGTTAGGATCTATGA+AGG + chr2_2:50068115-50068134 None:intergenic 30.0%
AATAAAATGGGTGATTAGGT+GGG + chr2_2:50068224-50068243 None:intergenic 30.0%
TAATAAAATGGGTGATTAGG+TGG + chr2_2:50068225-50068244 None:intergenic 30.0%
CTCTAATAAAATGGGTGATT+AGG + chr2_2:50068228-50068247 None:intergenic 30.0%
CTCATTTAAGTACCCAAAAA+TGG + chr2_2:50068269-50068288 None:intergenic 30.0%
TCTCACACAAAGTTCTTAAA+TGG - chr2_2:50068365-50068384 Msa0255770:intron 30.0%
CTCACACAAAGTTCTTAAAT+GGG - chr2_2:50068366-50068385 Msa0255770:intron 30.0%
!!! AATTGGGGAATTTTTTTTGG+GGG + chr2_2:50068510-50068529 None:intergenic 30.0%
!!! CAATTGGGGAATTTTTTTTG+GGG + chr2_2:50068511-50068530 None:intergenic 30.0%
!!! CTCAATTGGGGAATTTTTTT+TGG + chr2_2:50068513-50068532 None:intergenic 30.0%
CAAAAAAAATTCCCCAATTG+AGG - chr2_2:50068511-50068530 Msa0255770:intron 30.0%
GAGCATTCTTTAATCATGAA+AGG - chr2_2:50068608-50068627 Msa0255770:intron 30.0%
AAAGAGAAAAAAAGCTTGCA+AGG - chr2_2:50068910-50068929 Msa0255770:CDS 30.0%
! ATGCTTTGAACTCTGTTTAT+CGG - chr2_2:50069008-50069027 Msa0255770:CDS 30.0%
CGGTGAGCTAAATATATTAA+AGG + chr2_2:50069241-50069260 None:intergenic 30.0%
GGTTTATGTTTGTGTAAGAG+TGG + chr2_2:50061146-50061165 None:intergenic 35.0%
TTTGTTCTGTGGAGAAAAGA+GGG + chr2_2:50061167-50061186 None:intergenic 35.0%
! TTTTGTTCTGTGGAGAAAAG+AGG + chr2_2:50061168-50061187 None:intergenic 35.0%
GAAATTGAGAAAGAAGGAGT+GGG + chr2_2:50061191-50061210 None:intergenic 35.0%
TGAAATTGAGAAAGAAGGAG+TGG + chr2_2:50061192-50061211 None:intergenic 35.0%
ATGGCTGAAATTGAGAAAGA+AGG + chr2_2:50061197-50061216 None:intergenic 35.0%
TGAAGTTGAAAGAGAAGGAA+TGG + chr2_2:50061216-50061235 None:intergenic 35.0%
GATGATGAAGTTGAAAGAGA+AGG + chr2_2:50061221-50061240 None:intergenic 35.0%
CAACTTCATCATCATTCACA+TGG - chr2_2:50061228-50061247 Msa0255770:three_prime_UTR 35.0%
GAGAAGGAGTAGAATCATAT+GGG + chr2_2:50061310-50061329 None:intergenic 35.0%
AGAGAAGGAGTAGAATCATA+TGG + chr2_2:50061311-50061330 None:intergenic 35.0%
TCATGCATTGTTCTCATACT+AGG - chr2_2:50061533-50061552 Msa0255770:intron 35.0%
CATGCATTGTTCTCATACTA+GGG - chr2_2:50061534-50061553 Msa0255770:intron 35.0%
TTCTTGACCAAAGAAATGGA+AGG - chr2_2:50061761-50061780 Msa0255770:intron 35.0%
!! CCCTCAGTTACTTCTAAAAT+AGG + chr2_2:50062010-50062029 None:intergenic 35.0%
GATGCAATGAAAACAGTTTG+AGG - chr2_2:50062038-50062057 Msa0255770:intron 35.0%
GCAGTTTCCTTGATATATCA+AGG - chr2_2:50062233-50062252 Msa0255770:intron 35.0%
CTTGGATTTCAATTTGCCTT+AGG - chr2_2:50062284-50062303 Msa0255770:intron 35.0%
AACTAGAGAAGTTCATCCTA+AGG + chr2_2:50062303-50062322 None:intergenic 35.0%
GCCTTACATTTCTTATGATG+AGG + chr2_2:50062328-50062347 None:intergenic 35.0%
! TTTTAGCAATTCAGGTCTTC+AGG - chr2_2:50062490-50062509 Msa0255770:intron 35.0%
! ATTGGAGACTTTGAAAGCTA+TGG - chr2_2:50062537-50062556 Msa0255770:intron 35.0%
! TTGGAGACTTTGAAAGCTAT+GGG - chr2_2:50062538-50062557 Msa0255770:intron 35.0%
GCTTCAATAGAGACTACTAA+AGG - chr2_2:50062565-50062584 Msa0255770:intron 35.0%
TCGTCAAATAGTGACTATAG+CGG - chr2_2:50062951-50062970 Msa0255770:intron 35.0%
TGACAGATTGCAGAAAGTAA+CGG + chr2_2:50063012-50063031 None:intergenic 35.0%
TTAGCTTAATACTAATGGCC+AGG - chr2_2:50063134-50063153 Msa0255770:intron 35.0%
TAGCTTAATACTAATGGCCA+GGG - chr2_2:50063135-50063154 Msa0255770:intron 35.0%
GTTGTTGTCATGTGATTGAA+AGG - chr2_2:50063179-50063198 Msa0255770:intron 35.0%
!! TTACACAAGAGGTTGTTTCT+AGG + chr2_2:50063223-50063242 None:intergenic 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr2_2:50063228-50063247 Msa0255770:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr2_2:50063234-50063253 None:intergenic 35.0%
ACTTCGTAGAATACACCAAA+TGG - chr2_2:50063256-50063275 Msa0255770:intron 35.0%
TAAACAATGAGACTGCTAGA+GGG + chr2_2:50063607-50063626 None:intergenic 35.0%
ATAAACAATGAGACTGCTAG+AGG + chr2_2:50063608-50063627 None:intergenic 35.0%
CTAGCAGTCTCATTGTTTAT+TGG - chr2_2:50063608-50063627 Msa0255770:intron 35.0%
TTCAGTGCTCAATACTCAAA+GGG + chr2_2:50063736-50063755 None:intergenic 35.0%
CTGAAGTTCATTTCAACCAT+TGG - chr2_2:50063761-50063780 Msa0255770:intron 35.0%
CAGGCAATCCATTTATACAT+TGG - chr2_2:50063796-50063815 Msa0255770:intron 35.0%
! CACATGATGGAGATAATCTT+TGG + chr2_2:50063824-50063843 None:intergenic 35.0%
! TTGAATTTTCTACACAGTCC+AGG + chr2_2:50063962-50063981 None:intergenic 35.0%
! TAATTACGGTTTTCCTACTG+TGG + chr2_2:50064010-50064029 None:intergenic 35.0%
! TTTTGCAACCTAAGCATTTG+GGG - chr2_2:50064242-50064261 Msa0255770:intron 35.0%
!! TTTTAGATGTGGTAGTGAGA+TGG - chr2_2:50064271-50064290 Msa0255770:intron 35.0%
TTTGATGCAAGACATTGTCT+AGG - chr2_2:50064379-50064398 Msa0255770:intron 35.0%
AGGTATCAAAATTGTGGATG+AGG - chr2_2:50064549-50064568 Msa0255770:intron 35.0%
!! TAGTTTTACGTTTTCCCTGT+GGG + chr2_2:50064702-50064721 None:intergenic 35.0%
!! ATAGTTTTACGTTTTCCCTG+TGG + chr2_2:50064703-50064722 None:intergenic 35.0%
GTTATGTTATGCTCATCACA+AGG - chr2_2:50064781-50064800 Msa0255770:intron 35.0%
ACTATAGCTATAGCCTATAG+TGG - chr2_2:50064844-50064863 Msa0255770:exon 35.0%
AAGATATCGAAGCTACCTTA+CGG + chr2_2:50065012-50065031 None:intergenic 35.0%
GCTTCGATATCTTATCAATC+AGG - chr2_2:50065019-50065038 Msa0255770:CDS 35.0%
AAAATTGTTAGAGGGTTGTC+AGG + chr2_2:50065074-50065093 None:intergenic 35.0%
! ACCCTCTAACAATTTTTCAC+AGG - chr2_2:50065078-50065097 Msa0255770:intron 35.0%
GTCCTGTGAAAAATTGTTAG+AGG + chr2_2:50065083-50065102 None:intergenic 35.0%
GGCCAAAAATAAATGTTGCA+AGG + chr2_2:50065127-50065146 None:intergenic 35.0%
ATCTCCTGTAAAGGATTTGA+GGG + chr2_2:50065189-50065208 None:intergenic 35.0%
AATCTCCTGTAAAGGATTTG+AGG + chr2_2:50065190-50065209 None:intergenic 35.0%
TAAATGTCCGTTTAGTTGCA+CGG - chr2_2:50065756-50065775 Msa0255770:intron 35.0%
! GGCTTTTGAACAGAAGAAAT+TGG + chr2_2:50065883-50065902 None:intergenic 35.0%
!!! GTTAGCTTTTAGTTTACAGG+AGG + chr2_2:50065992-50066011 None:intergenic 35.0%
AAAGCTAACCAAGACTAAGT+TGG - chr2_2:50066003-50066022 Msa0255770:intron 35.0%
GAAGGTTAAAGAGGAAAACA+TGG + chr2_2:50066145-50066164 None:intergenic 35.0%
TGAAAGACAGAAGGTTAAAG+AGG + chr2_2:50066154-50066173 None:intergenic 35.0%
GATTTAACATGTGATTGGTG+AGG + chr2_2:50066243-50066262 None:intergenic 35.0%
! AAGGAACAGTTAAAGTACCT+TGG + chr2_2:50066353-50066372 None:intergenic 35.0%
ATCAGAAGATGAATGAGACA+TGG + chr2_2:50066423-50066442 None:intergenic 35.0%
GACAAAAGTCTATACAGTTG+GGG + chr2_2:50066494-50066513 None:intergenic 35.0%
AGAGGAGGCAAAATTGATTA+TGG + chr2_2:50066747-50066766 None:intergenic 35.0%
! AATTTTGCCTCCTCTAAACA+TGG - chr2_2:50066752-50066771 Msa0255770:intron 35.0%
TGAGATGCTCTTAAAAGACT+TGG + chr2_2:50066829-50066848 None:intergenic 35.0%
!! TGTTCTCGGTCTTTTAAGAA+CGG - chr2_2:50066855-50066874 Msa0255770:intron 35.0%
TGGTTGCAAATCATTAGACT+AGG + chr2_2:50067175-50067194 None:intergenic 35.0%
! ATATTCAACTTTGGTGCAGT+TGG + chr2_2:50067195-50067214 None:intergenic 35.0%
TAAAATTGACAGATGGCACA+TGG + chr2_2:50067374-50067393 None:intergenic 35.0%
! TGTGCCATCTGTCAATTTTA+TGG - chr2_2:50067374-50067393 Msa0255770:intron 35.0%
! GTGCCATCTGTCAATTTTAT+GGG - chr2_2:50067375-50067394 Msa0255770:intron 35.0%
TGAGAAGATTGGAAATGGAA+TGG + chr2_2:50067436-50067455 None:intergenic 35.0%
! CCCTTGTTCTTCTTTTCATT+TGG - chr2_2:50067599-50067618 Msa0255770:CDS 35.0%
GCCAAATGAAAAGAAGAACA+AGG + chr2_2:50067979-50067998 None:intergenic 35.0%
GCCAAATGAAAAGAAGAACA+AGG - chr2_2:50067979-50067998 Msa0255770:intron 35.0%
! CCCTTGTTCTTCTTTTCATT+TGG + chr2_2:50067599-50067618 None:intergenic 35.0%
! AACTAGCAATGAGACTTTTG+AGG + chr2_2:50068198-50068217 None:intergenic 35.0%
ATAAAATGGGTGATTAGGTG+GGG + chr2_2:50068223-50068242 None:intergenic 35.0%
TGCGGATGCTCTAATAAAAT+GGG + chr2_2:50068236-50068255 None:intergenic 35.0%
TTGCGGATGCTCTAATAAAA+TGG + chr2_2:50068237-50068256 None:intergenic 35.0%
!! TTTTATTAGAGCATCCGCAA+TGG - chr2_2:50068237-50068256 Msa0255770:intron 35.0%
TTAAGACCCCCAACTTTAAA+CGG + chr2_2:50068463-50068482 None:intergenic 35.0%
!!! ATTGGGGAATTTTTTTTGGG+GGG + chr2_2:50068509-50068528 None:intergenic 35.0%
ACCTAATAGGTACCTCAATT+GGG + chr2_2:50068526-50068545 None:intergenic 35.0%
TACCTAATAGGTACCTCAAT+TGG + chr2_2:50068527-50068546 None:intergenic 35.0%
! ATTGAGGTACCTATTAGGTA+CGG - chr2_2:50068527-50068546 Msa0255770:intron 35.0%
ATTAAGACACCGTACCTAAT+AGG + chr2_2:50068539-50068558 None:intergenic 35.0%
ATTAGGTACGGTGTCTTAAT+TGG - chr2_2:50068539-50068558 Msa0255770:intron 35.0%
ATTACTAAGACCATCCTCAA+TGG + chr2_2:50068576-50068595 None:intergenic 35.0%
TGTGTTTATCAAAAGGAGAG+AGG - chr2_2:50068826-50068845 Msa0255770:CDS 35.0%
AAGGCTGTAAAACTAGAGTT+TGG + chr2_2:50068940-50068959 None:intergenic 35.0%
!!! AAACTCTAGTTTTACAGCCT+TGG - chr2_2:50068939-50068958 Msa0255770:CDS 35.0%
!!! AACTCTAGTTTTACAGCCTT+GGG - chr2_2:50068940-50068959 Msa0255770:CDS 35.0%
GAGACTATCATTGAGAAAAG+AGG - chr2_2:50068979-50068998 Msa0255770:CDS 35.0%
TCTGTTTATCGGTGACAAAA+GGG - chr2_2:50069019-50069038 Msa0255770:CDS 35.0%
TCTTGATGTGTTTGCTTTGA+AGG - chr2_2:50069121-50069140 Msa0255770:five_prime_UTR 35.0%
GGAGGAACAACAACAAACAT+TGG + chr2_2:50061030-50061049 None:intergenic 40.0%
ACTCACTCATCCATCAGATT+GGG + chr2_2:50061055-50061074 None:intergenic 40.0%
TGTTTGTGTAAGAGTGGGAT+GGG + chr2_2:50061140-50061159 None:intergenic 40.0%
ATGTTTGTGTAAGAGTGGGA+TGG + chr2_2:50061141-50061160 None:intergenic 40.0%
ACCACAACAATCACAACAGA+TGG - chr2_2:50061263-50061282 Msa0255770:intron 40.0%
TCCATCTGTTGTGATTGTTG+TGG + chr2_2:50061267-50061286 None:intergenic 40.0%
ACAACAATCACAACAGATGG+AGG - chr2_2:50061266-50061285 Msa0255770:intron 40.0%
! CAGCGATTTGGATGAAAGAA+GGG + chr2_2:50061352-50061371 None:intergenic 40.0%
! AACCGTTTGTTTGAGACGTT+TGG + chr2_2:50061435-50061454 None:intergenic 40.0%
CATTGTTCTCATACTAGGGA+GGG - chr2_2:50061538-50061557 Msa0255770:intron 40.0%
ATATGAGTTCAATTCCTGGG+TGG - chr2_2:50061733-50061752 Msa0255770:intron 40.0%
GCTAGTTCAAAAAATGAGGG+TGG + chr2_2:50061950-50061969 None:intergenic 40.0%
GGAGAGTGAATTGTAGCTTA+AGG - chr2_2:50062104-50062123 Msa0255770:intron 40.0%
CAGTCTAATACTGCTGATGT+GGG + chr2_2:50062214-50062233 None:intergenic 40.0%
AAAACGTTGCTGCTACATCT+TGG - chr2_2:50062266-50062285 Msa0255770:intron 40.0%
TTCAGGAGAGAAGTCAGTAA+AGG - chr2_2:50062507-50062526 Msa0255770:intron 40.0%
! GTCAGTAAAGGAAGAAGCAT+TGG - chr2_2:50062519-50062538 Msa0255770:intron 40.0%
! TGGAGACTTTGAAAGCTATG+GGG - chr2_2:50062539-50062558 Msa0255770:intron 40.0%
AGAAATGCTTGAACAGGTGA+AGG + chr2_2:50062595-50062614 None:intergenic 40.0%
TCACCTGTTCAAGCATTTCT+CGG - chr2_2:50062595-50062614 Msa0255770:intron 40.0%
CACTCCAATTCATAACTGTG+AGG + chr2_2:50062831-50062850 None:intergenic 40.0%
CGTCAAATAGTGACTATAGC+GGG - chr2_2:50062952-50062971 Msa0255770:intron 40.0%
CAATCTGTCATTGACAACAC+CGG - chr2_2:50063022-50063041 Msa0255770:intron 40.0%
AGCTTAATACTAATGGCCAG+GGG - chr2_2:50063136-50063155 Msa0255770:intron 40.0%
TCGTAGAATACACCAAATGG+TGG - chr2_2:50063259-50063278 Msa0255770:intron 40.0%
CGTAGAATACACCAAATGGT+GGG - chr2_2:50063260-50063279 Msa0255770:intron 40.0%
AATTAATCTAAAGGGCAGCC+TGG + chr2_2:50063325-50063344 None:intergenic 40.0%
GGGTCGTGAATGAAACATAT+GGG + chr2_2:50063715-50063734 None:intergenic 40.0%
TCAGTGCTCAATACTCAAAG+GGG + chr2_2:50063735-50063754 None:intergenic 40.0%
GTTCAGTGCTCAATACTCAA+AGG + chr2_2:50063737-50063756 None:intergenic 40.0%
!! TTGAGTATTGAGCACTGAAC+TGG - chr2_2:50063737-50063756 Msa0255770:intron 40.0%
TAGCAATAGTACACCACAGT+AGG - chr2_2:50063994-50064013 Msa0255770:intron 40.0%
CTTGTGATGAGCATTACAAC+AGG + chr2_2:50064085-50064104 None:intergenic 40.0%
CTGTTGTAATGCTCATCACA+AGG - chr2_2:50064083-50064102 Msa0255770:intron 40.0%
TGTCTCTGTACACATCTACA+TGG - chr2_2:50064113-50064132 Msa0255770:intron 40.0%
TCTGTACACATCTACATGGA+GGG - chr2_2:50064117-50064136 Msa0255770:intron 40.0%
AAATTCAGCCCCAAATGCTT+AGG + chr2_2:50064253-50064272 None:intergenic 40.0%
!! TGGGGCTGAATTTTTAGATG+TGG - chr2_2:50064260-50064279 Msa0255770:intron 40.0%
AAATTCAGCCCCAAATGCAT+AGG - chr2_2:50064467-50064486 Msa0255770:intron 40.0%
! AGTTTTACGTTTTCCCTGTG+GGG + chr2_2:50064701-50064720 None:intergenic 40.0%
TCACAAGGTGATGTATGTCT+TGG - chr2_2:50064796-50064815 Msa0255770:intron 40.0%
TACTGTTAGATTATGGCGCA+AGG + chr2_2:50064952-50064971 None:intergenic 40.0%
TTACGGTGATTGTTATCTGG+CGG + chr2_2:50064995-50065014 None:intergenic 40.0%
ACCTTACGGTGATTGTTATC+TGG + chr2_2:50064998-50065017 None:intergenic 40.0%
!!! ATTTTTGGCCTAAACTCCCT+TGG - chr2_2:50065137-50065156 Msa0255770:intron 40.0%
GTAATAGACCAAGGGAGTTT+AGG + chr2_2:50065148-50065167 None:intergenic 40.0%
TAAAGGATTTGAGGGCAAGT+TGG + chr2_2:50065181-50065200 None:intergenic 40.0%
ACAAATGACGCTGAATTGAG+CGG - chr2_2:50065281-50065300 Msa0255770:intron 40.0%
GTATAGCGAAGTTGAAGTTG+AGG - chr2_2:50065352-50065371 Msa0255770:intron 40.0%
CGAAGTTGAAGTTGAGGAAT+AGG - chr2_2:50065358-50065377 Msa0255770:intron 40.0%
!! AGTGGTTTGTTCGACAATAG+CGG - chr2_2:50065610-50065629 Msa0255770:intron 40.0%
! AATCGTGGATTGCACAATAG+CGG - chr2_2:50065672-50065691 Msa0255770:intron 40.0%
! GCAAGCTTTTACGTGAACAT+GGG + chr2_2:50065818-50065837 None:intergenic 40.0%
! AGCAAGCTTTTACGTGAACA+TGG + chr2_2:50065819-50065838 None:intergenic 40.0%
! TAGCTTCTAAAAAATCGGGG+TGG - chr2_2:50065843-50065862 Msa0255770:intron 40.0%
AAGGACTTCCAACTTAGTCT+TGG + chr2_2:50066014-50066033 None:intergenic 40.0%
TAGTCTTTCACTGTTGGCAA+TGG - chr2_2:50066042-50066061 Msa0255770:intron 40.0%
AAAACTGCCAAAGGACAGAA+GGG + chr2_2:50066293-50066312 None:intergenic 40.0%
TAAAACTGCCAAAGGACAGA+AGG + chr2_2:50066294-50066313 None:intergenic 40.0%
GTGAAAGTAATAGTGCACCA+AGG - chr2_2:50066333-50066352 Msa0255770:intron 40.0%
TACTGCAAAACTGCATTGCA+AGG + chr2_2:50066372-50066391 None:intergenic 40.0%
ATGCTTGACTCCATGTTTAG+AGG + chr2_2:50066765-50066784 None:intergenic 40.0%
CTCTTAAAAGACTTGGAAGC+TGG + chr2_2:50066822-50066841 None:intergenic 40.0%
GCATCTCAGTTCATTGTTCT+CGG - chr2_2:50066841-50066860 Msa0255770:intron 40.0%
TCAACTCACTCATCTTCACA+TGG + chr2_2:50066897-50066916 None:intergenic 40.0%
CTTTATGAGAATCCTAACGC+AGG + chr2_2:50067026-50067045 None:intergenic 40.0%
AACTCATATGTACACGCGTT+TGG + chr2_2:50067057-50067076 None:intergenic 40.0%
GTGTGGCTTCTATTGATCAT+TGG - chr2_2:50067339-50067358 Msa0255770:intron 40.0%
GCACCCATAAAATTGACAGA+TGG + chr2_2:50067381-50067400 None:intergenic 40.0%
ATTGGAAATGGAATGGAGTG+TGG + chr2_2:50067429-50067448 None:intergenic 40.0%
AAAAATGGGTGTCTCCATTG+CGG + chr2_2:50068254-50068273 None:intergenic 40.0%
!! CAATGGAGACACCCATTTTT+GGG - chr2_2:50068254-50068273 Msa0255770:intron 40.0%
AAAAGAGTGATGTGTACGTG+TGG + chr2_2:50068294-50068313 None:intergenic 40.0%
ACTTTGTGTGAGATCTGAGT+TGG + chr2_2:50068358-50068377 None:intergenic 40.0%
TAAGACCCCCAACTTTAAAC+GGG + chr2_2:50068462-50068481 None:intergenic 40.0%
CCTAATAGGTACCTCAATTG+GGG + chr2_2:50068525-50068544 None:intergenic 40.0%
GTTTATCAAAAGGAGAGAGG+TGG - chr2_2:50068829-50068848 Msa0255770:CDS 40.0%
CTCTGTTTATCGGTGACAAA+AGG - chr2_2:50069018-50069037 Msa0255770:CDS 40.0%
TTATCGGTGACAAAAGGGAT+AGG - chr2_2:50069024-50069043 Msa0255770:CDS 40.0%
TATCGGTGACAAAAGGGATA+GGG - chr2_2:50069025-50069044 Msa0255770:CDS 40.0%
TGACAAAAGGGATAGGGAAA+AGG - chr2_2:50069031-50069050 Msa0255770:CDS 40.0%
! TGTTCTGTGTGGCTTTTGGT+GGG + chr2_2:50060948-50060967 None:intergenic 45.0%
! CTTCTGTTCTGTGTGGCTTT+TGG + chr2_2:50060952-50060971 None:intergenic 45.0%
ATGTGGACTTCTGTTCTGTG+TGG + chr2_2:50060959-50060978 None:intergenic 45.0%
ACTCATCCATCAGATTGGGA+GGG + chr2_2:50061051-50061070 None:intergenic 45.0%
CACTCACTCATCCATCAGAT+TGG + chr2_2:50061056-50061075 None:intergenic 45.0%
!!! AAGGAGTGGGTTTTGTTCTG+TGG + chr2_2:50061178-50061197 None:intergenic 45.0%
ATCACAACAGATGGAGGAGA+TGG - chr2_2:50061272-50061291 Msa0255770:intron 45.0%
GATGAAAGAAGGGTCATCAG+TGG + chr2_2:50061342-50061361 None:intergenic 45.0%
! GCAGCGATTTGGATGAAAGA+AGG + chr2_2:50061353-50061372 None:intergenic 45.0%
GGCCAAACGTCTCAAACAAA+CGG - chr2_2:50061430-50061449 Msa0255770:intron 45.0%
GCATTGTTCTCATACTAGGG+AGG - chr2_2:50061537-50061556 Msa0255770:intron 45.0%
ACCAAGCAATTGAGCTCAAG+TGG - chr2_2:50061673-50061692 Msa0255770:intron 45.0%
ACCACTTGAGCTCAATTGCT+TGG + chr2_2:50061677-50061696 None:intergenic 45.0%
GCAGTCTAATACTGCTGATG+TGG + chr2_2:50062215-50062234 None:intergenic 45.0%
AATGCTTGAACAGGTGAAGG+TGG + chr2_2:50062592-50062611 None:intergenic 45.0%
CACCTGTTCAAGCATTTCTC+GGG - chr2_2:50062596-50062615 Msa0255770:intron 45.0%
ACCTGTTCAAGCATTTCTCG+GGG - chr2_2:50062597-50062616 Msa0255770:intron 45.0%
TACGGCTAAAAGGACATGAG+AGG + chr2_2:50062729-50062748 None:intergenic 45.0%
ACAACTTTACCGTTGCACCA+AGG + chr2_2:50063164-50063183 None:intergenic 45.0%
ACAAAGCTCCCACATACACA+GGG + chr2_2:50063299-50063318 None:intergenic 45.0%
! CAAAGCTCGCAGTAGCTTTT+TGG + chr2_2:50063417-50063436 None:intergenic 45.0%
! ACAAGATCTAGCTCATTGCC+CGG - chr2_2:50063537-50063556 Msa0255770:intron 45.0%
GGGGTCGTGAATGAAACATA+TGG + chr2_2:50063716-50063735 None:intergenic 45.0%
CTCTGTACACATCTACATGG+AGG - chr2_2:50064116-50064135 Msa0255770:intron 45.0%
CTGTACACATCTACATGGAG+GGG - chr2_2:50064118-50064137 Msa0255770:intron 45.0%
TGTACACATCTACATGGAGG+GGG - chr2_2:50064119-50064138 Msa0255770:intron 45.0%
GATGCAAGACATTGTCTAGG+TGG - chr2_2:50064382-50064401 Msa0255770:intron 45.0%
TTTCCCCCACCTATGCATTT+GGG + chr2_2:50064479-50064498 None:intergenic 45.0%
ATTTCCCCCACCTATGCATT+TGG + chr2_2:50064480-50064499 None:intergenic 45.0%
TTATTGTTGGAGTTCCCCAC+AGG - chr2_2:50064684-50064703 Msa0255770:intron 45.0%
TATTGTTGGAGTTCCCCACA+GGG - chr2_2:50064685-50064704 Msa0255770:intron 45.0%
TACGGTGATTGTTATCTGGC+GGG + chr2_2:50064994-50065013 None:intergenic 45.0%
GCCAGATAACAATCACCGTA+AGG - chr2_2:50064994-50065013 Msa0255770:CDS 45.0%
CTTGCCCTCAAATCCTTTAC+AGG - chr2_2:50065182-50065201 Msa0255770:intron 45.0%
GTCATTTGTGCGAGTCTCAA+CGG + chr2_2:50065270-50065289 None:intergenic 45.0%
GTAGTACTACTGTGCATCGT+TGG + chr2_2:50065327-50065346 None:intergenic 45.0%
ACGATGCACAGTAGTACTAC+TGG - chr2_2:50065327-50065346 Msa0255770:intron 45.0%
CTGCTGTGCGATAACACTAA+AGG - chr2_2:50065707-50065726 Msa0255770:intron 45.0%
AAACCCACCGTGCAACTAAA+CGG + chr2_2:50065766-50065785 None:intergenic 45.0%
TTTCACTGTTGGCAATGGTG+TGG - chr2_2:50066047-50066066 Msa0255770:intron 45.0%
TTCACTGTTGGCAATGGTGT+GGG - chr2_2:50066048-50066067 Msa0255770:intron 45.0%
CTTCTGCATTCACACGTACA+CGG - chr2_2:50066216-50066235 Msa0255770:intron 45.0%
GTGTTTACCCTTCTGTCCTT+TGG - chr2_2:50066283-50066302 Msa0255770:intron 45.0%
GTCTATACAGTTGGGGTTAC+TGG + chr2_2:50066487-50066506 None:intergenic 45.0%
CTTGACTCCATGTTTAGAGG+AGG + chr2_2:50066762-50066781 None:intergenic 45.0%
! CGCAGGTACATGTGAGTTTT+AGG + chr2_2:50067009-50067028 None:intergenic 45.0%
AACTCACATGTACCTGCGTT+AGG - chr2_2:50067011-50067030 Msa0255770:intron 45.0%
AAATGGAATGGAGTGTGGTG+GGG + chr2_2:50067424-50067443 None:intergenic 45.0%
GAAATGGAATGGAGTGTGGT+GGG + chr2_2:50067425-50067444 None:intergenic 45.0%
ACAATCTTCTGCAAGCTTGC+AGG - chr2_2:50067642-50067661 Msa0255770:CDS 45.0%
! GCAATGGAGACACCCATTTT+TGG - chr2_2:50068253-50068272 Msa0255770:intron 45.0%
GGAGGGATTGAGTGCTTATT+AGG + chr2_2:50068337-50068356 None:intergenic 45.0%
! TGTGTGAGATCTGAGTTGGA+GGG + chr2_2:50068354-50068373 None:intergenic 45.0%
! TTGTGTGAGATCTGAGTTGG+AGG + chr2_2:50068355-50068374 None:intergenic 45.0%
! CCCCAATTGAGGTACCTATT+AGG - chr2_2:50068522-50068541 Msa0255770:intron 45.0%
TGGTAAAGACACCACCATTG+AGG - chr2_2:50068559-50068578 Msa0255770:intron 45.0%
AAAGACACCACCATTGAGGA+TGG - chr2_2:50068563-50068582 Msa0255770:intron 45.0%
ACTAAGACCATCCTCAATGG+TGG + chr2_2:50068573-50068592 None:intergenic 45.0%
CTTGGGAATTGATTGTGCTG+CGG - chr2_2:50068957-50068976 Msa0255770:CDS 45.0%
!! TTTATTATATATGTAAAAAA+AGG + chr2_2:50068131-50068150 None:intergenic 5.0%
! CTGTTCTGTGTGGCTTTTGG+TGG + chr2_2:50060949-50060968 None:intergenic 50.0%
CACTCATCCATCAGATTGGG+AGG + chr2_2:50061052-50061071 None:intergenic 50.0%
TAAGAGTGGGATGGGAAGGT+GGG + chr2_2:50061132-50061151 None:intergenic 50.0%
TGTGTAAGAGTGGGATGGGA+AGG + chr2_2:50061136-50061155 None:intergenic 50.0%
TCAGTGGAGGAGAGAAGAGA+AGG + chr2_2:50061326-50061345 None:intergenic 50.0%
GAAAGAAGGGTCATCAGTGG+AGG + chr2_2:50061339-50061358 None:intergenic 50.0%
GGAGAACACTAGCAGCGATT+TGG + chr2_2:50061364-50061383 None:intergenic 50.0%
GGTCAAGAATTGTTCCACCC+AGG + chr2_2:50061750-50061769 None:intergenic 50.0%
TTTCTCGGGGCAATATCAGC+TGG - chr2_2:50062610-50062629 Msa0255770:intron 50.0%
TAAGTTCGCCACCATCATCG+AGG - chr2_2:50062654-50062673 Msa0255770:intron 50.0%
CTACAAGACTGTTGCGCAGA+GGG - chr2_2:50062975-50062994 Msa0255770:intron 50.0%
ACATACACAGGGTCTGGGAA+GGG + chr2_2:50063288-50063307 None:intergenic 50.0%
TTCCCAGACCCTGTGTATGT+GGG - chr2_2:50063288-50063307 Msa0255770:intron 50.0%
CACAAAGCTCCCACATACAC+AGG + chr2_2:50063300-50063319 None:intergenic 50.0%
! AGCTCGCAGTAGCTTTTTGG+AGG + chr2_2:50063414-50063433 None:intergenic 50.0%
! GGGGCTGAATTTTCACGATG+TGG + chr2_2:50064459-50064478 None:intergenic 50.0%
TTCAGCCCCAAATGCATAGG+TGG - chr2_2:50064470-50064489 Msa0255770:intron 50.0%
TCAGCCCCAAATGCATAGGT+GGG - chr2_2:50064471-50064490 Msa0255770:intron 50.0%
TTCCCCCACCTATGCATTTG+GGG + chr2_2:50064478-50064497 None:intergenic 50.0%
ATGTCCGTTTAGTTGCACGG+TGG - chr2_2:50065759-50065778 Msa0255770:intron 50.0%
TGTCCGTTTAGTTGCACGGT+GGG - chr2_2:50065760-50065779 Msa0255770:intron 50.0%
! AAATCGGGGTGGATTTGCAC+TGG - chr2_2:50065854-50065873 Msa0255770:intron 50.0%
! AATCGGGGTGGATTTGCACT+GGG - chr2_2:50065855-50065874 Msa0255770:intron 50.0%
! GACTTGGAAGCTGGTCTAAG+AGG + chr2_2:50066813-50066832 None:intergenic 50.0%
GGAATAAGGGAGGGACATTC+TGG + chr2_2:50067403-50067422 None:intergenic 50.0%
! TGGAGTGTGGTGGGGAATAA+GGG + chr2_2:50067416-50067435 None:intergenic 50.0%
! ATGGAGTGTGGTGGGGAATA+AGG + chr2_2:50067417-50067436 None:intergenic 50.0%
GGAAATGGAATGGAGTGTGG+TGG + chr2_2:50067426-50067445 None:intergenic 50.0%
! AGCTTGCAGGTTTTGCAGCA+TGG - chr2_2:50067655-50067674 Msa0255770:CDS 50.0%
! AGCTTGCAGGTTTTGCAGCA+TGG + chr2_2:50067655-50067674 None:intergenic 50.0%
ACCTGCAAGCTTGCAGAAGA+TGG - chr2_2:50067936-50067955 Msa0255770:intron 50.0%
ACCATCTTCTGCAAGCTTGC+AGG + chr2_2:50067940-50067959 None:intergenic 50.0%
! TTGCGGGTCCCGTTTAAAGT+TGG - chr2_2:50068451-50068470 Msa0255770:intron 50.0%
! TGCGGGTCCCGTTTAAAGTT+GGG - chr2_2:50068452-50068471 Msa0255770:intron 50.0%
GGGGGTCTTAAATAAGACCC+CGG - chr2_2:50068472-50068491 Msa0255770:intron 50.0%
GGGGTCTTAAATAAGACCCC+GGG - chr2_2:50068473-50068492 Msa0255770:intron 50.0%
CGCAGCACAATCAATTCCCA+AGG + chr2_2:50068959-50068978 None:intergenic 50.0%
GTTCCTCCCTCCCAATCTGA+TGG - chr2_2:50061042-50061061 Msa0255770:three_prime_UTR 55.0%
CATCCATCAGATTGGGAGGG+AGG + chr2_2:50061048-50061067 None:intergenic 55.0%
GGGGTGAGAAGAGAAGGTTG+TGG + chr2_2:50061112-50061131 None:intergenic 55.0%
GAAGGTGGGGTGAGAAGAGA+AGG + chr2_2:50061118-50061137 None:intergenic 55.0%
AAGAGTGGGATGGGAAGGTG+GGG + chr2_2:50061131-50061150 None:intergenic 55.0%
GTAAGAGTGGGATGGGAAGG+TGG + chr2_2:50061133-50061152 None:intergenic 55.0%
GCTGCTAGTGTTCTCCTCAC+CGG - chr2_2:50061368-50061387 Msa0255770:intron 55.0%
GAGGAGGACGGAAATAGCAC+CGG + chr2_2:50061390-50061409 None:intergenic 55.0%
! GTTTGAGACGTTTGGCCCTG+CGG + chr2_2:50061427-50061446 None:intergenic 55.0%
GCCCCGAGAAATGCTTGAAC+AGG + chr2_2:50062601-50062620 None:intergenic 55.0%
GCTACAAGACTGTTGCGCAG+AGG - chr2_2:50062974-50062993 Msa0255770:intron 55.0%
CATACACAGGGTCTGGGAAG+GGG + chr2_2:50063287-50063306 None:intergenic 55.0%
CACATACACAGGGTCTGGGA+AGG + chr2_2:50063289-50063308 None:intergenic 55.0%
CTTCCCAGACCCTGTGTATG+TGG - chr2_2:50063287-50063306 Msa0255770:intron 55.0%
CTCCCACATACACAGGGTCT+GGG + chr2_2:50063293-50063312 None:intergenic 55.0%
! ATGTGGGAGCTTTGTGCACC+AGG - chr2_2:50063304-50063323 Msa0255770:intron 55.0%
CAGCCCCAAATGCATAGGTG+GGG - chr2_2:50064472-50064491 Msa0255770:intron 55.0%
AGCCCCAAATGCATAGGTGG+GGG - chr2_2:50064473-50064492 Msa0255770:intron 55.0%
ATGACGCTGAATTGAGCGGC+AGG - chr2_2:50065285-50065304 Msa0255770:intron 55.0%
ACTGTTGGCAATGGTGTGGG+TGG - chr2_2:50066051-50066070 Msa0255770:intron 55.0%
GGGTAAACACTCTGCGTCCT+TGG + chr2_2:50066273-50066292 None:intergenic 55.0%
! GTGTGGTGGGGAATAAGGGA+GGG + chr2_2:50067412-50067431 None:intergenic 55.0%
! AGTGTGGTGGGGAATAAGGG+AGG + chr2_2:50067413-50067432 None:intergenic 55.0%
! GCGGGTCCCGTTTAAAGTTG+GGG - chr2_2:50068453-50068472 Msa0255770:intron 55.0%
! CGGGTCCCGTTTAAAGTTGG+GGG - chr2_2:50068454-50068473 Msa0255770:intron 55.0%
TTGGGGGGTCTCTTAAGACC+CGG + chr2_2:50068494-50068513 None:intergenic 55.0%
!! GGACGGAAATAGCACCGGTG+AGG + chr2_2:50061385-50061404 None:intergenic 60.0%
GAAGGAGCGGAAGAGGAGGA+CGG + chr2_2:50061402-50061421 None:intergenic 60.0%
GTTCGCCACCATCATCGAGG+CGG - chr2_2:50062657-50062676 Msa0255770:intron 60.0%
TTCGCCACCATCATCGAGGC+GGG - chr2_2:50062658-50062677 Msa0255770:intron 60.0%
ACTAATGGCCAGGGGAGCCT+TGG - chr2_2:50063144-50063163 Msa0255770:intron 60.0%
TGGGAAGGGGTCCCACCATT+TGG + chr2_2:50063274-50063293 None:intergenic 60.0%
GCTCCCACATACACAGGGTC+TGG + chr2_2:50063294-50063313 None:intergenic 60.0%
TGGCAATGGTGTGGGTGGCA+AGG - chr2_2:50066056-50066075 Msa0255770:intron 60.0%
GGCAATGGTGTGGGTGGCAA+GGG - chr2_2:50066057-50066076 Msa0255770:intron 60.0%
TGGGGGGTCTCTTAAGACCC+GGG + chr2_2:50068493-50068512 None:intergenic 60.0%
TGAGACGTTTGGCCCTGCGG+CGG + chr2_2:50061424-50061443 None:intergenic 65.0%
! CAGACCCGCCTCGATGATGG+TGG + chr2_2:50062665-50062684 None:intergenic 65.0%
GCTCAGACCCGCCTCGATGA+TGG + chr2_2:50062668-50062687 None:intergenic 65.0%
TCATCGAGGCGGGTCTGAGC+CGG - chr2_2:50062668-50062687 Msa0255770:intron 65.0%
! CCAGGGGAGCCTTGGTGCAA+CGG - chr2_2:50063152-50063171 Msa0255770:intron 65.0%
GGGGGGTCTCTTAAGACCCG+GGG + chr2_2:50068492-50068511 None:intergenic 65.0%
GGCGGAAGGAGCGGAAGAGG+AGG + chr2_2:50061406-50061425 None:intergenic 70.0%
TGCGGCGGAAGGAGCGGAAG+AGG + chr2_2:50061409-50061428 None:intergenic 70.0%
TCTTCCGCTCCTTCCGCCGC+AGG - chr2_2:50061408-50061427 Msa0255770:intron 70.0%
CTTCCGCTCCTTCCGCCGCA+GGG - chr2_2:50061409-50061428 Msa0255770:intron 70.0%
ACGTTTGGCCCTGCGGCGGA+AGG + chr2_2:50061420-50061439 None:intergenic 70.0%
CCGTTGCACCAAGGCTCCCC+TGG + chr2_2:50063155-50063174 None:intergenic 70.0%
TGGCCCTGCGGCGGAAGGAG+CGG + chr2_2:50061415-50061434 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 50060921 50069264 50060921 ID=Msa0255770;Name=Msa0255770
chr2_2 mRNA 50060921 50069264 50060921 ID=Msa0255770-mRNA-1;Parent=Msa0255770;Name=Msa0255770-mRNA-1;_AED=0.07;_eAED=0.07;_QI=171|1|1|1|0.75|0.6|5|396|281
chr2_2 exon 50060921 50061277 50060921 ID=Msa0255770-mRNA-1:exon:15083;Parent=Msa0255770-mRNA-1
chr2_2 exon 50064806 50065085 50064806 ID=Msa0255770-mRNA-1:exon:15082;Parent=Msa0255770-mRNA-1
chr2_2 exon 50065170 50065195 50065170 ID=Msa0255770-mRNA-1:exon:15081;Parent=Msa0255770-mRNA-1
chr2_2 exon 50067471 50067689 50067471 ID=Msa0255770-mRNA-1:exon:15080;Parent=Msa0255770-mRNA-1
chr2_2 exon 50068734 50069264 50068734 ID=Msa0255770-mRNA-1:exon:15079;Parent=Msa0255770-mRNA-1
chr2_2 five_prime_UTR 50069094 50069264 50069094 ID=Msa0255770-mRNA-1:five_prime_utr;Parent=Msa0255770-mRNA-1
chr2_2 CDS 50068734 50069093 50068734 ID=Msa0255770-mRNA-1:cds;Parent=Msa0255770-mRNA-1
chr2_2 CDS 50067471 50067689 50067471 ID=Msa0255770-mRNA-1:cds;Parent=Msa0255770-mRNA-1
chr2_2 CDS 50065170 50065195 50065170 ID=Msa0255770-mRNA-1:cds;Parent=Msa0255770-mRNA-1
chr2_2 CDS 50064845 50065085 50064845 ID=Msa0255770-mRNA-1:cds;Parent=Msa0255770-mRNA-1
chr2_2 three_prime_UTR 50064806 50064844 50064806 ID=Msa0255770-mRNA-1:three_prime_utr;Parent=Msa0255770-mRNA-1
chr2_2 three_prime_UTR 50060921 50061277 50060921 ID=Msa0255770-mRNA-1:three_prime_utr;Parent=Msa0255770-mRNA-1
Gene Sequence

>Msa0255770

ATGTTGCAGTCTCAGTGCCACAACCTTCTCTTCTCACCCCACCTTCCCATCCCACTCTTACACAAACATAAACCCTCTTTTCTCCACAGAACAAAACCCACTCCTTCTTTCTCAATTTCAGCCATTCCTTCTCTTTCAACTTCATCATCATTCACATGGCTTGCTGATATCACCACAACAATCACAACAGATGGAGGAGATGGACCCATTGAAATCCCATATGATTCTACTCCTTCTCTTCTCTCCTCCACTGATGACCCTTCTTTCATCCAAATCGCTGCTAGTGTTCTCCTCACCGGTGCTATTTCCGTCCTCCTCTTCCGCTCCTTCCGCCGCAGGGCCAAACGTCTCAAACAAACGCAATTCAGGTCTTCAGGAGAGAAGTCAGTAAAGGAAGAAGCATTGGAGACTTTGAAAGCTATGGGGTCTGCTTCAATAGAGACTACTAAAGGTCCACCTTCACCTGTTCAAGCATTTCTCGGGGCAATATCAGCTGGTGTTATTTCTCTTATTTTGTATAAGTTCGCCACCATCATCGAGGCGGGTCTGAGCCGGCAAACAATTTCAGATGATTTCTCTGCCCGCCAGATAACAATCACCGTAAGGACGATAATAAACGGCTTGACCTACCTTGCAACATTTATTTTTGGCCTAAACTCCCTTGGTCTATTACTTTATTCTGGCCAACTTGCCCTCAAATCCTTTACAGGAGATTCAATTGAAAAGGAAACTGAAAACAAAAGCGCTGATCAGTCTAGTTTATCAAATTTATCCGTTGAGACTCGCACAAATGACGCTGAATTGAGCGGCAGGAATGAAGAACAAAGTTCCAACGATGCACAGTAG

Protein sequence

>Msa0255770

MLQSQCHNLLFSPHLPIPLLHKHKPSFLHRTKPTPSFSISAIPSLSTSSSFTWLADITTTITTDGGDGPIEIPYDSTPSLLSSTDDPSFIQIAASVLLTGAISVLLFRSFRRRAKRLKQTQFRSSGEKSVKEEALETLKAMGSASIETTKGPPSPVQAFLGAISAGVISLILYKFATIIEAGLSRQTISDDFSARQITITVRTIINGLTYLATFIFGLNSLGLLLYSGQLALKSFTGDSIEKETENKSADQSSLSNLSVETRTNDAELSGRNEEQSSNDAQ*