AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1325560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1325560 MtrunA17_Chr8g0359571 96.250 240 7 1 1 238 1 240 7.31e-174 477
Msa1325560 MtrunA17_Chr3g0120801 39.316 117 71 0 102 218 26 142 8.91e-22 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1325560 AT1G78630.1 82.682 179 29 1 60 238 65 241 4.06e-109 314
Msa1325560 AT3G01790.1 35.043 117 76 0 102 218 32 148 8.11e-19 82.0
Msa1325560 AT3G01790.2 35.043 117 76 0 102 218 32 148 8.11e-19 82.0
Msa1325560 AT3G01790.3 37.000 100 63 0 102 201 32 131 6.02e-16 73.2

Find 82 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGGAATATTTACTTAAAA+TGG 0.121372 8_4:+37797001 None:intergenic
TTACAAATTAATATCATTTA+TGG 0.143729 8_4:-37796921 Msa1325560:three_prime_UTR
TGTGCTCACTCTATCTTTAC+TGG 0.207949 8_4:+37802037 None:intergenic
TGTATTCTCTTATCCCTAAT+TGG 0.216660 8_4:+37797322 None:intergenic
GCATGTTCAATAATTCTTTC+AGG 0.233109 8_4:+37799096 None:intergenic
GCCCATTGATTTGCCAATTA+GGG 0.248728 8_4:-37797335 Msa1325560:CDS
GATAATGAAAGGTTTGAAAA+TGG 0.249766 8_4:+37801885 None:intergenic
AGCCCATTGATTTGCCAATT+AGG 0.260148 8_4:-37797336 Msa1325560:CDS
ATATTCCATCTCTTATCTTT+TGG 0.261030 8_4:-37796988 Msa1325560:three_prime_UTR
TGCGCTTCATGTGGATGATC+TGG 0.278875 8_4:+37797361 None:intergenic
TTGACATGATCCGAAGCTTT+TGG 0.279177 8_4:+37801189 None:intergenic
AGTGCCGCCGATAAAGCTTC+TGG 0.285755 8_4:+37799175 None:intergenic
GATGCTACAGATAAAATTCT+TGG 0.293196 8_4:-37801141 Msa1325560:CDS
GTTGAACTTACCCTCCCTTT+TGG 0.329004 8_4:+37799057 None:intergenic
GAACCTGAGCCCCGCTTTCA+AGG 0.332396 8_4:-37801774 Msa1325560:CDS
AGTAATGATTGCAGGACATT+TGG 0.339663 8_4:-37801227 Msa1325560:intron
GTTCTTTGTTGAATCTTGAT+AGG 0.344705 8_4:-37797099 Msa1325560:three_prime_UTR
AAGGACATTGTTGCAGTTGA+TGG 0.353599 8_4:+37802005 None:intergenic
TACAAATTAATATCATTTAT+GGG 0.358442 8_4:-37796920 Msa1325560:three_prime_UTR
CAGGAATTCTGTTCTGCAGC+TGG 0.358647 8_4:+37799115 None:intergenic
AAGCTCGATGTTCATTGAAA+TGG 0.361251 8_4:+37797216 None:intergenic
GTTGGTGTTTGCAGCTTGGC+AGG 0.380894 8_4:-37797417 Msa1325560:intron
AGAGGACCCAGAAGCTTTAT+CGG 0.394368 8_4:-37799182 Msa1325560:CDS
CTGGGCCGCTATAAACCTTC+AGG 0.404656 8_4:+37797380 None:intergenic
ATCCCTAATTGGCAAATCAA+TGG 0.418119 8_4:+37797333 None:intergenic
ATAATGAAAGGTTTGAAAAT+GGG 0.418527 8_4:+37801886 None:intergenic
GGGCCTTGAAAGCGGGGCTC+AGG 0.450923 8_4:+37801771 None:intergenic
TGGGAATTGAGAAGCAAGAA+AGG 0.456506 8_4:+37801905 None:intergenic
TCCCTAATTGGCAAATCAAT+GGG 0.458371 8_4:+37797334 None:intergenic
GCGCTTCATGTGGATGATCT+GGG 0.462607 8_4:+37797362 None:intergenic
TAATATAGAAGACCTTCTAT+TGG 0.467387 8_4:-37796960 Msa1325560:three_prime_UTR
TTATACCGGGCCTTGAAAGC+GGG 0.474696 8_4:+37801764 None:intergenic
ATTATTGAACATGCTGTTCG+TGG 0.477565 8_4:-37799087 Msa1325560:CDS
GTTCGTGGCATGCTTCCAAA+AGG 0.478146 8_4:-37799072 Msa1325560:CDS
TGTGTAGATAAATGCAGAAA+AGG 0.481327 8_4:-37799223 Msa1325560:intron
TAATGTATGTAGAGCAAGTG+TGG 0.483171 8_4:+37802066 None:intergenic
GTGCCGCCGATAAAGCTTCT+GGG 0.487074 8_4:+37799176 None:intergenic
TTTCATTGTCCATTCTCAGC+AGG 0.495956 8_4:-37801838 Msa1325560:CDS
AGGACATTTGGAACACAACC+TGG 0.498468 8_4:-37801215 Msa1325560:CDS
CGGCGGCACTCAGGTCGACC+TGG 0.501166 8_4:-37799162 Msa1325560:CDS
TGAGCCCCGCTTTCAAGGCC+CGG 0.505387 8_4:-37801769 Msa1325560:intron
ACGAGGATCTTCTTCGACAA+TGG 0.505973 8_4:+37801809 None:intergenic
TGAGAGAATGAAGAAGATGA+AGG 0.506757 8_4:+37801954 None:intergenic
GACTCTATTCACACGCCTGA+AGG 0.513706 8_4:-37797395 Msa1325560:CDS
GTGCTCACTCTATCTTTACT+GGG 0.515725 8_4:+37802038 None:intergenic
GGTACATGTTTAATCTTCAA+AGG 0.516354 8_4:+37797061 None:intergenic
TTCAACCAAAAGATAAGAGA+TGG 0.526147 8_4:+37796983 None:intergenic
AAGCTTTATCGGCGGCACTC+AGG 0.528770 8_4:-37799171 Msa1325560:CDS
TGGAAGTGTCCTGCTGAGAA+TGG 0.538194 8_4:+37801829 None:intergenic
CAAGATTCAACAAAGAACCT+TGG 0.539606 8_4:+37797104 None:intergenic
AACCTGGTATCCAAAAGCTT+CGG 0.541687 8_4:-37801199 Msa1325560:CDS
ATGGGCTGCTGCGCTTCATG+TGG 0.546351 8_4:+37797352 None:intergenic
CATGGGTGCATTTGTAATTG+TGG 0.546463 8_4:-37801049 Msa1325560:intron
GCAGAAAAGGTTGCTGTCAG+TGG 0.548150 8_4:-37799210 Msa1325560:CDS
GGTGTATGTTGTTTAGAGCA+TGG 0.549133 8_4:-37797279 Msa1325560:three_prime_UTR
TTGAAGAAGATGATAATGAA+AGG 0.554980 8_4:+37801874 None:intergenic
GAGAGAATGAAGAAGATGAA+GGG 0.556314 8_4:+37801955 None:intergenic
CAGAAAAGGTTGCTGTCAGT+GGG 0.568241 8_4:-37799209 Msa1325560:CDS
AATGTATGTAGAGCAAGTGT+GGG 0.582091 8_4:+37802067 None:intergenic
AATGCACCCATGTCCACACT+AGG 0.592790 8_4:+37801060 None:intergenic
GATGAAGGGAACGTCACTGA+TGG 0.593477 8_4:+37801969 None:intergenic
TTCGTGGCATGCTTCCAAAA+GGG 0.595250 8_4:-37799071 Msa1325560:CDS
GTTATACCGGGCCTTGAAAG+CGG 0.599322 8_4:+37801763 None:intergenic
CTCACTCTATCTTTACTGGG+AGG 0.604841 8_4:+37802041 None:intergenic
GTCTCGACTGTCATACCACC+AGG 0.617174 8_4:+37799144 None:intergenic
AGTTGCAGAGATAAAGACAT+AGG 0.617291 8_4:-37797300 Msa1325560:exon
TATACCGGGCCTTGAAAGCG+GGG 0.621350 8_4:+37801765 None:intergenic
TGATGGTGAACCACACAGCA+AGG 0.624881 8_4:+37801986 None:intergenic
GTGGCATGCTTCCAAAAGGG+AGG 0.631240 8_4:-37799068 Msa1325560:CDS
TCACTCTATCTTTACTGGGA+GGG 0.631965 8_4:+37802042 None:intergenic
TGAGAATGGACAATGAAAGA+TGG 0.639431 8_4:+37801843 None:intergenic
AGTGACTTATACACCTAGTG+TGG 0.642570 8_4:-37801073 Msa1325560:CDS
TGGCATGCTTCCAAAAGGGA+GGG 0.645169 8_4:-37799067 Msa1325560:intron
TTATACACCTAGTGTGGACA+TGG 0.648097 8_4:-37801067 Msa1325560:CDS
CAATTGCGAATCACATCCGA+GGG 0.651937 8_4:-37801104 Msa1325560:CDS
ACAATTGCGAATCACATCCG+AGG 0.652462 8_4:-37801105 Msa1325560:CDS
GCAACAATGTCCTTGCTGTG+TGG 0.677674 8_4:-37801996 Msa1325560:exon
ATGTCAATACAGCGAAAACG+TGG 0.689193 8_4:-37801173 Msa1325560:CDS
ACACGCCTGAAGGTTTATAG+CGG 0.692335 8_4:-37797385 Msa1325560:CDS
GGACCCAGAAGCTTTATCGG+CGG 0.709633 8_4:-37799179 Msa1325560:CDS
TATACACCTAGTGTGGACAT+GGG 0.714930 8_4:-37801066 Msa1325560:CDS
GGTTCAACACAGATGAAACG+AGG 0.749686 8_4:+37801792 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAGTAAATTTTTTTTGTA+GGG + chr8_4:37799040-37799059 None:intergenic 10.0%
!!! TATAAGTAAATTTTTTTTGT+AGG + chr8_4:37799041-37799060 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr8_4:37799101-37799120 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGGAAAAT+TGG + chr8_4:37799547-37799566 None:intergenic 10.0%
!! TTACAAATTAATATCATTTA+TGG - chr8_4:37802063-37802082 Msa1325560:five_prime_UTR 10.0%
!! TACAAATTAATATCATTTAT+GGG - chr8_4:37802064-37802083 Msa1325560:five_prime_UTR 10.0%
!!! AAACTGGAAATATAATTTTA+TGG - chr8_4:37797404-37797423 Msa1325560:CDS 15.0%
!! ATAATTGAAGTAAATTAACA+TGG + chr8_4:37797519-37797538 None:intergenic 15.0%
!!! TATTTTTAAAGCTTTTAACT+TGG - chr8_4:37797687-37797706 Msa1325560:intron 15.0%
!!! AATTTTCTTTTGGTTTAAAA+TGG - chr8_4:37798081-37798100 Msa1325560:intron 15.0%
!!! TATTTTATTTGGAAAAAAGA+CGG - chr8_4:37798315-37798334 Msa1325560:intron 15.0%
!! AAGTTTATTTATTATGCATT+TGG - chr8_4:37798922-37798941 Msa1325560:intron 15.0%
!! AATGCAATTAAAATTAAGTA+AGG + chr8_4:37799011-37799030 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr8_4:37799232-37799251 Msa1325560:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG - chr8_4:37799267-37799286 Msa1325560:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr8_4:37799351-37799370 Msa1325560:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8_4:37799423-37799442 Msa1325560:intron 15.0%
!!! TAACCCTAAATTTTAATTAT+AGG - chr8_4:37799491-37799510 Msa1325560:intron 15.0%
!! ATGCCTATAATTAAAATTTA+GGG + chr8_4:37799497-37799516 None:intergenic 15.0%
!! AAAAACTAAAATATCAATAG+AGG - chr8_4:37799566-37799585 Msa1325560:intron 15.0%
!! AAAAAAAGAAAAGAAAGAAT+AGG - chr8_4:37801183-37801202 Msa1325560:CDS 15.0%
!! AAAATTAATCTAAAGAGATA+AGG + chr8_4:37801485-37801504 None:intergenic 15.0%
!!! TATCTCTTTAGATTAATTTT+TGG - chr8_4:37801485-37801504 Msa1325560:intron 15.0%
!!! ACTATTTTTGTAAACAATAA+AGG - chr8_4:37801510-37801529 Msa1325560:intron 15.0%
!! ATAATGAAAGGTTTGAAAAT+GGG + chr8_4:37797101-37797120 None:intergenic 20.0%
!!! ATGATTTTGTTGAAATTTTC+TGG - chr8_4:37797304-37797323 Msa1325560:exon 20.0%
!!! AATTTTCTGGTATTAATTTC+TGG - chr8_4:37797317-37797336 Msa1325560:CDS 20.0%
!!! ATTTTCTGGTATTAATTTCT+GGG - chr8_4:37797318-37797337 Msa1325560:CDS 20.0%
!! AAAAACTGAAAGGAAAAAAT+TGG + chr8_4:37797602-37797621 None:intergenic 20.0%
!!! TCCTTTCAGTTTTTATTTTT+TGG - chr8_4:37797608-37797627 Msa1325560:intron 20.0%
!! TCGATTTAATATATTTGAAG+CGG - chr8_4:37797721-37797740 Msa1325560:intron 20.0%
!!! TTTTTAATTGAACATCTTTC+TGG - chr8_4:37798056-37798075 Msa1325560:intron 20.0%
!! AATGATGATAACAATTTGAA+GGG + chr8_4:37798281-37798300 None:intergenic 20.0%
!!! ATAGAAACTGGTATTTTATT+TGG - chr8_4:37798304-37798323 Msa1325560:intron 20.0%
!! CTGAAATAATTAGAGAAATA+AGG + chr8_4:37798484-37798503 None:intergenic 20.0%
!!! TGCATTTGGTTTTAAATTTT+AGG - chr8_4:37798936-37798955 Msa1325560:intron 20.0%
!!! GCATTTGGTTTTAAATTTTA+GGG - chr8_4:37798937-37798956 Msa1325560:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr8_4:37798953-37798972 Msa1325560:intron 20.0%
!! AAACAAAATTTACTTTAGCA+GGG + chr8_4:37799072-37799091 None:intergenic 20.0%
!! TAAACAAAATTTACTTTAGC+AGG + chr8_4:37799073-37799092 None:intergenic 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr8_4:37799321-37799340 None:intergenic 20.0%
!!! TTTAGGGTTAATTATGTTTT+TGG + chr8_4:37799481-37799500 None:intergenic 20.0%
!! CATGCCTATAATTAAAATTT+AGG + chr8_4:37799498-37799517 None:intergenic 20.0%
!! AAACAAAATCTCCTATAAAA+TGG - chr8_4:37799589-37799608 Msa1325560:intron 20.0%
!!! AAACAATACAACCATTTTAT+AGG + chr8_4:37799603-37799622 None:intergenic 20.0%
!!! TGCTAGGTTAAAATTATTTT+TGG - chr8_4:37800797-37800816 Msa1325560:intron 20.0%
!!! AATATCTTTAATTTCTGTCA+GGG - chr8_4:37801025-37801044 Msa1325560:intron 20.0%
!!! ATTGTATTGTTTTTTATCCA+AGG - chr8_4:37801863-37801882 Msa1325560:CDS 20.0%
!!! ACATGTACCATTTTTAAATA+TGG - chr8_4:37801937-37801956 Msa1325560:CDS 20.0%
!! CTCAAAACCATATTTAAAAA+TGG + chr8_4:37801947-37801966 None:intergenic 20.0%
!! GATGGAATATTTACTTAAAA+TGG + chr8_4:37801986-37802005 None:intergenic 20.0%
! GATAATGAAAGGTTTGAAAA+TGG + chr8_4:37797102-37797121 None:intergenic 25.0%
!! TTGAAGAAGATGATAATGAA+AGG + chr8_4:37797113-37797132 None:intergenic 25.0%
!!! TCTCTCTCTTTTTTTGTTAA+TGG - chr8_4:37797245-37797264 Msa1325560:three_prime_UTR 25.0%
!!! CTCTCTCTTTTTTTGTTAAT+GGG - chr8_4:37797246-37797265 Msa1325560:three_prime_UTR 25.0%
! AATCATATAGAACAACACTT+TGG + chr8_4:37797290-37797309 None:intergenic 25.0%
! TTATCATGAAAGAATGAAAC+TGG - chr8_4:37797388-37797407 Msa1325560:CDS 25.0%
! AAACCAGAAAGAAGATAATA+AGG + chr8_4:37797438-37797457 None:intergenic 25.0%
! ACTAATGAGATACAAAATGT+AGG + chr8_4:37797543-37797562 None:intergenic 25.0%
!! TCTCATTAGTTTAATTAGCT+TGG - chr8_4:37797553-37797572 Msa1325560:intron 25.0%
!! TAATTAGCTTGGAAATGTAT+AGG - chr8_4:37797564-37797583 Msa1325560:intron 25.0%
! GCCAAAAAATAAAAACTGAA+AGG + chr8_4:37797612-37797631 None:intergenic 25.0%
!! ATTGCTTTAAATCTTTACGT+CGG - chr8_4:37797648-37797667 Msa1325560:intron 25.0%
!! AATCATTACTCTTTTCAGTT+AGG + chr8_4:37797747-37797766 None:intergenic 25.0%
! CTGCATAAATTATTTGCAAT+TGG - chr8_4:37797967-37797986 Msa1325560:intron 25.0%
! TAAATTATTTGCAATTGGCA+TGG - chr8_4:37797972-37797991 Msa1325560:intron 25.0%
!!! CTTTCTGGTTAATTTTCTTT+TGG - chr8_4:37798071-37798090 Msa1325560:intron 25.0%
!!! TTCTTTTGGTTTAAAATGGA+TGG - chr8_4:37798085-37798104 Msa1325560:intron 25.0%
! GGAACTTATGAAATATATGA+TGG - chr8_4:37798106-37798125 Msa1325560:intron 25.0%
!!! ACCAAAGAAGTTTTTTGAAA+CGG - chr8_4:37798167-37798186 Msa1325560:intron 25.0%
! GAATGATGATAACAATTTGA+AGG + chr8_4:37798282-37798301 None:intergenic 25.0%
! CATGTTATAAATAAGAAGAC+GGG + chr8_4:37798461-37798480 None:intergenic 25.0%
! GCATGTTATAAATAAGAAGA+CGG + chr8_4:37798462-37798481 None:intergenic 25.0%
!!! CATTAAGAGTACTAGTATTT+AGG + chr8_4:37798615-37798634 None:intergenic 25.0%
! TGTGACATTATTATAGCAAA+AGG + chr8_4:37798662-37798681 None:intergenic 25.0%
!!! TCATGTTTTTTCGATCATAA+TGG - chr8_4:37798817-37798836 Msa1325560:intron 25.0%
!!! CATGTTTTTTCGATCATAAT+GGG - chr8_4:37798818-37798837 Msa1325560:intron 25.0%
! AATCTATAGAATGTAGAAAG+CGG + chr8_4:37798896-37798915 None:intergenic 25.0%
! TCTACATTCTATAGATTGTA+AGG - chr8_4:37798899-37798918 Msa1325560:intron 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr8_4:37799297-37799316 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr8_4:37799362-37799381 Msa1325560:intron 25.0%
!!! TGAGTGCAAAATATTTTTGT+AGG - chr8_4:37799393-37799412 Msa1325560:intron 25.0%
!!! GAGTGCAAAATATTTTTGTA+GGG - chr8_4:37799394-37799413 Msa1325560:intron 25.0%
! CATTAATGACTATGTTTATG+AGG - chr8_4:37799640-37799659 Msa1325560:intron 25.0%
! ATATAGAAGTGAAGAATGAA+AGG - chr8_4:37800106-37800125 Msa1325560:intron 25.0%
! CACAATAAAGATGCAAAAAA+TGG + chr8_4:37800525-37800544 None:intergenic 25.0%
!!! TTTTCCATTGTTATTACTTC+CGG - chr8_4:37800651-37800670 Msa1325560:intron 25.0%
! TTGATCTTGTTACAGATTAT+TGG - chr8_4:37800881-37800900 Msa1325560:intron 25.0%
!! GAATATCTTTAATTTCTGTC+AGG - chr8_4:37801024-37801043 Msa1325560:intron 25.0%
! AATAGTAGAGTAGTTAAAGT+AGG + chr8_4:37801317-37801336 None:intergenic 25.0%
! CTGTATACAATTTATATTCG+TGG - chr8_4:37801350-37801369 Msa1325560:intron 25.0%
!! AACTTGTGTTAATTCTAAAG+AGG - chr8_4:37801456-37801475 Msa1325560:intron 25.0%
!! ACTTGTGTTAATTCTAAAGA+GGG - chr8_4:37801457-37801476 Msa1325560:intron 25.0%
!! ATATTCCATCTCTTATCTTT+TGG - chr8_4:37801996-37802015 Msa1325560:exon 25.0%
! TAATATAGAAGACCTTCTAT+TGG - chr8_4:37802024-37802043 Msa1325560:five_prime_UTR 25.0%
!! TTTTTAAATCAGCCAATAGA+AGG + chr8_4:37802039-37802058 None:intergenic 25.0%
AAAAGAGAGAGAAGTTATAC+CGG + chr8_4:37797237-37797256 None:intergenic 30.0%
!! AAGCCTTATTATCTTCTTTC+TGG - chr8_4:37797432-37797451 Msa1325560:intron 30.0%
CAATTACGAGAAATGAATAC+TGG + chr8_4:37797476-37797495 None:intergenic 30.0%
GATGCTACAGATAAAATTCT+TGG - chr8_4:37797843-37797862 Msa1325560:intron 30.0%
!!! CATGGAAATGCTGTTTTTTA+TGG - chr8_4:37797990-37798009 Msa1325560:intron 30.0%
TCCGTTTCAAAAAACTTCTT+TGG + chr8_4:37798171-37798190 None:intergenic 30.0%
!! ATTTTAGCCTTTCCTTTTTG+CGG - chr8_4:37798216-37798235 Msa1325560:intron 30.0%
ATCATCATTCTGATAGAAAC+TGG - chr8_4:37798292-37798311 Msa1325560:intron 30.0%
!! GAAATTTTGAATAAGTGCTG+AGG + chr8_4:37798411-37798430 None:intergenic 30.0%
TTGGAATTAAATAGAGTAGC+AGG + chr8_4:37798568-37798587 None:intergenic 30.0%
ATACTAGTACTCTTAATGAG+TGG - chr8_4:37798617-37798636 Msa1325560:intron 30.0%
GTCACATTGACAAAGAAATT+TGG - chr8_4:37798676-37798695 Msa1325560:intron 30.0%
! TAGAAGGTCGCAATTTTATA+GGG + chr8_4:37798980-37798999 None:intergenic 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG + chr8_4:37798981-37799000 None:intergenic 30.0%
AAGTAAGGACTAAACTTAGA+AGG + chr8_4:37798996-37799015 None:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG - chr8_4:37799270-37799289 Msa1325560:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr8_4:37799438-37799457 Msa1325560:intron 30.0%
AGCATAAAACTTCATGAGAA+GGG + chr8_4:37799670-37799689 None:intergenic 30.0%
TAGCATAAAACTTCATGAGA+AGG + chr8_4:37799671-37799690 None:intergenic 30.0%
!! TTCTCATGAAGTTTTATGCT+AGG - chr8_4:37799670-37799689 Msa1325560:intron 30.0%
!!! TCTTGGCCTATTATTTTAAC+TGG - chr8_4:37799735-37799754 Msa1325560:intron 30.0%
!!! CTTGGCCTATTATTTTAACT+GGG - chr8_4:37799736-37799755 Msa1325560:intron 30.0%
!!! TTGGCCTATTATTTTAACTG+GGG - chr8_4:37799737-37799756 Msa1325560:intron 30.0%
ACAACCCCAGTTAAAATAAT+AGG + chr8_4:37799744-37799763 None:intergenic 30.0%
TGTGTAGATAAATGCAGAAA+AGG - chr8_4:37799761-37799780 Msa1325560:intron 30.0%
GCATGTTCAATAATTCTTTC+AGG + chr8_4:37799891-37799910 None:intergenic 30.0%
AGATTCATTTCCATAACTGA+TGG - chr8_4:37800079-37800098 Msa1325560:intron 30.0%
CTATATTCTTCCATCAGTTA+TGG + chr8_4:37800092-37800111 None:intergenic 30.0%
!!! TACACGTTTTTGGTTTGAAA+GGG - chr8_4:37800156-37800175 Msa1325560:intron 30.0%
CACTGTTATTCATTATGTGA+CGG + chr8_4:37800354-37800373 None:intergenic 30.0%
AAGTCGAAGTTGAGATAATT+GGG + chr8_4:37800396-37800415 None:intergenic 30.0%
AAAGTCGAAGTTGAGATAAT+TGG + chr8_4:37800397-37800416 None:intergenic 30.0%
AACAATGGAAAAGGAGAAAT+GGG + chr8_4:37800643-37800662 None:intergenic 30.0%
TAACAATGGAAAAGGAGAAA+TGG + chr8_4:37800644-37800663 None:intergenic 30.0%
GGAAGTAATAACAATGGAAA+AGG + chr8_4:37800652-37800671 None:intergenic 30.0%
! AGATGGAGAAAACAACTTTT+TGG + chr8_4:37800700-37800719 None:intergenic 30.0%
!!! TTTTAACCTAGCATTGATGA+GGG + chr8_4:37800790-37800809 None:intergenic 30.0%
!!! ATTTTAACCTAGCATTGATG+AGG + chr8_4:37800791-37800810 None:intergenic 30.0%
AGCAAGACAAATCACAAATT+TGG + chr8_4:37800824-37800843 None:intergenic 30.0%
! ATTTGTGATTTGTCTTGCTT+TGG - chr8_4:37800825-37800844 Msa1325560:intron 30.0%
AGAAAACAATTGTGAAGATG+GGG + chr8_4:37800916-37800935 None:intergenic 30.0%
CAGAAAACAATTGTGAAGAT+GGG + chr8_4:37800917-37800936 None:intergenic 30.0%
GATATTCTACTTGAATTGAC+AGG + chr8_4:37801011-37801030 None:intergenic 30.0%
TTCTATTCCATTCAGTTCTT+GGG + chr8_4:37801147-37801166 None:intergenic 30.0%
TTTCTATTCCATTCAGTTCT+TGG + chr8_4:37801148-37801167 None:intergenic 30.0%
AGGATTGTCATGTATAAACA+GGG + chr8_4:37801297-37801316 None:intergenic 30.0%
TAGGATTGTCATGTATAAAC+AGG + chr8_4:37801298-37801317 None:intergenic 30.0%
!!! AAGTTCATTGGTTGTTTTTG+TGG - chr8_4:37801408-37801427 Msa1325560:intron 30.0%
TGTATTCTCTTATCCCTAAT+TGG + chr8_4:37801665-37801684 None:intergenic 30.0%
GTTCTTTGTTGAATCTTGAT+AGG - chr8_4:37801885-37801904 Msa1325560:CDS 30.0%
! CTTCAAAGGTACACAAAAAA+AGG + chr8_4:37801912-37801931 None:intergenic 30.0%
GGTACATGTTTAATCTTCAA+AGG + chr8_4:37801926-37801945 None:intergenic 30.0%
TTCAACCAAAAGATAAGAGA+TGG + chr8_4:37802004-37802023 None:intergenic 30.0%
AATGTATGTAGAGCAAGTGT+GGG + chr8_4:37796920-37796939 None:intergenic 35.0%
TAATGTATGTAGAGCAAGTG+TGG + chr8_4:37796921-37796940 None:intergenic 35.0%
GAGAGAATGAAGAAGATGAA+GGG + chr8_4:37797032-37797051 None:intergenic 35.0%
TGAGAGAATGAAGAAGATGA+AGG + chr8_4:37797033-37797052 None:intergenic 35.0%
TGAGAATGGACAATGAAAGA+TGG + chr8_4:37797144-37797163 None:intergenic 35.0%
AAAGAGAGAGAAGTTATACC+GGG + chr8_4:37797236-37797255 None:intergenic 35.0%
GGTCTTTGTAATCTAGCATA+TGG - chr8_4:37797339-37797358 Msa1325560:CDS 35.0%
CTGAAAAGAGTAATGATTGC+AGG - chr8_4:37797749-37797768 Msa1325560:intron 35.0%
AGTAATGATTGCAGGACATT+TGG - chr8_4:37797757-37797776 Msa1325560:intron 35.0%
! AAGTCACTAGATTTTTCCCT+CGG + chr8_4:37797899-37797918 None:intergenic 35.0%
! TGGACTGTTTTGTAAGTAGA+AGG - chr8_4:37798126-37798145 Msa1325560:intron 35.0%
!!! GTTTTTTGAAACGGACATAC+AGG - chr8_4:37798176-37798195 Msa1325560:intron 35.0%
GTTAACAACTGTACAATGGA+CGG + chr8_4:37798526-37798545 None:intergenic 35.0%
GACAGTTAACAACTGTACAA+TGG + chr8_4:37798530-37798549 None:intergenic 35.0%
GAGTAGCAGGTATAAAAACA+GGG + chr8_4:37798555-37798574 None:intergenic 35.0%
AGAGTAGCAGGTATAAAAAC+AGG + chr8_4:37798556-37798575 None:intergenic 35.0%
GAGTACTAGTATTTAGGAAG+AGG + chr8_4:37798609-37798628 None:intergenic 35.0%
! CAAGTTTAGAACACTACGAA+AGG - chr8_4:37799135-37799154 Msa1325560:CDS 35.0%
!!! TGTTTTTGGTCCCTACAAAA+TGG + chr8_4:37799467-37799486 None:intergenic 35.0%
ATTATTGAACATGCTGTTCG+TGG - chr8_4:37799897-37799916 Msa1325560:intron 35.0%
!!! CTACACGTTTTTGGTTTGAA+AGG - chr8_4:37800155-37800174 Msa1325560:intron 35.0%
TGAAGACAAAGTCTACTTTC+AGG + chr8_4:37800185-37800204 None:intergenic 35.0%
AAAGTAGACTTTGTCTTCAC+CGG - chr8_4:37800186-37800205 Msa1325560:intron 35.0%
!! ATAGAAAGGTTGATGTCGAA+AGG + chr8_4:37800320-37800339 None:intergenic 35.0%
! GTTATTCATTATGTGACGGA+AGG + chr8_4:37800350-37800369 None:intergenic 35.0%
TATCTCAACTTCGACTTTGA+AGG - chr8_4:37800399-37800418 Msa1325560:intron 35.0%
TAACTATCGAGGAAGGAATA+TGG + chr8_4:37800437-37800456 None:intergenic 35.0%
TTCTTCTATTGCATTCAGGT+TGG - chr8_4:37800582-37800601 Msa1325560:intron 35.0%
! TGGAGAAAACAACTTTTTGG+TGG + chr8_4:37800697-37800716 None:intergenic 35.0%
AAGAAGAAGAAGAGTGAAGA+CGG + chr8_4:37800751-37800770 None:intergenic 35.0%
!! TTTAACCTAGCATTGATGAG+GGG + chr8_4:37800789-37800808 None:intergenic 35.0%
AGAGAAGAAATCTGATGACA+AGG + chr8_4:37800859-37800878 None:intergenic 35.0%
GAAAACAATTGTGAAGATGG+GGG + chr8_4:37800915-37800934 None:intergenic 35.0%
CCAGAAAACAATTGTGAAGA+TGG + chr8_4:37800918-37800937 None:intergenic 35.0%
! CCATCTTCACAATTGTTTTC+TGG - chr8_4:37800915-37800934 Msa1325560:intron 35.0%
ATTCTGCATTTCATCCATCT+TGG - chr8_4:37801049-37801068 Msa1325560:intron 35.0%
GGATAAAAATTCAGCCAAGA+TGG + chr8_4:37801066-37801085 None:intergenic 35.0%
AGAGTTTCAGCATTACAAGA+TGG + chr8_4:37801087-37801106 None:intergenic 35.0%
! ATGTATAAACAGGGAGGTTT+TGG + chr8_4:37801288-37801307 None:intergenic 35.0%
ATTGTCATGTATAAACAGGG+AGG + chr8_4:37801294-37801313 None:intergenic 35.0%
AAACAACCAATGAACTTGAC+AGG + chr8_4:37801405-37801424 None:intergenic 35.0%
AGTTGAATCTACAGTAACCA+AGG - chr8_4:37801544-37801563 Msa1325560:intron 35.0%
GTTGAATCTACAGTAACCAA+GGG - chr8_4:37801545-37801564 Msa1325560:intron 35.0%
TCCCTAATTGGCAAATCAAT+GGG + chr8_4:37801653-37801672 None:intergenic 35.0%
ATCCCTAATTGGCAAATCAA+TGG + chr8_4:37801654-37801673 None:intergenic 35.0%
AGTTGCAGAGATAAAGACAT+AGG - chr8_4:37801684-37801703 Msa1325560:intron 35.0%
AAGCTCGATGTTCATTGAAA+TGG + chr8_4:37801771-37801790 None:intergenic 35.0%
CAAGATTCAACAAAGAACCT+TGG + chr8_4:37801883-37801902 None:intergenic 35.0%
TCACTCTATCTTTACTGGGA+GGG + chr8_4:37796945-37796964 None:intergenic 40.0%
GTGCTCACTCTATCTTTACT+GGG + chr8_4:37796949-37796968 None:intergenic 40.0%
TGTGCTCACTCTATCTTTAC+TGG + chr8_4:37796950-37796969 None:intergenic 40.0%
AAGGACATTGTTGCAGTTGA+TGG + chr8_4:37796982-37797001 None:intergenic 40.0%
TGGGAATTGAGAAGCAAGAA+AGG + chr8_4:37797082-37797101 None:intergenic 40.0%
TTTCATTGTCCATTCTCAGC+AGG - chr8_4:37797146-37797165 Msa1325560:three_prime_UTR 40.0%
AACCTGGTATCCAAAAGCTT+CGG - chr8_4:37797785-37797804 Msa1325560:intron 40.0%
! TTGACATGATCCGAAGCTTT+TGG + chr8_4:37797798-37797817 None:intergenic 40.0%
ATGTCAATACAGCGAAAACG+TGG - chr8_4:37797811-37797830 Msa1325560:intron 40.0%
AGTGACTTATACACCTAGTG+TGG - chr8_4:37797911-37797930 Msa1325560:intron 40.0%
TTATACACCTAGTGTGGACA+TGG - chr8_4:37797917-37797936 Msa1325560:intron 40.0%
TATACACCTAGTGTGGACAT+GGG - chr8_4:37797918-37797937 Msa1325560:intron 40.0%
CATGGGTGCATTTGTAATTG+TGG - chr8_4:37797935-37797954 Msa1325560:intron 40.0%
GTGCTCTAACTTCCCAAATA+GGG + chr8_4:37798348-37798367 None:intergenic 40.0%
AGTGCTCTAACTTCCCAAAT+AGG + chr8_4:37798349-37798368 None:intergenic 40.0%
!! TAGAGCACTGCAAAACATCA+AGG - chr8_4:37798360-37798379 Msa1325560:intron 40.0%
!! AGAGCACTGCAAAACATCAA+GGG - chr8_4:37798361-37798380 Msa1325560:intron 40.0%
AAATAAGAAGACGGGTCAAG+TGG + chr8_4:37798453-37798472 None:intergenic 40.0%
GAAGAGTGGTAGGAAGATAT+TGG + chr8_4:37798587-37798606 None:intergenic 40.0%
GTATTTAGGAAGAGGAAGAG+TGG + chr8_4:37798601-37798620 None:intergenic 40.0%
!! TTACAAGGTCGCCATTTTGT+AGG - chr8_4:37799453-37799472 Msa1325560:intron 40.0%
!! TACAAGGTCGCCATTTTGTA+GGG - chr8_4:37799454-37799473 Msa1325560:intron 40.0%
GCGATTGCTTTATGAAGTCT+TGG - chr8_4:37799718-37799737 Msa1325560:intron 40.0%
GCACAGTAGACATGTTAAGA+TGG - chr8_4:37799977-37799996 Msa1325560:intron 40.0%
AACCAAAAACGTGTAGTCTC+AGG + chr8_4:37800151-37800170 None:intergenic 40.0%
!! GAATCTAGTGGGTTGAATAG+TGG - chr8_4:37800237-37800256 Msa1325560:intron 40.0%
TGAATGGATGGGTCTTAAGA+AGG + chr8_4:37800278-37800297 None:intergenic 40.0%
!! AAGGTTGATGTCGAAAGGTT+TGG + chr8_4:37800315-37800334 None:intergenic 40.0%
AAGTTGAGATAATTGGGTCG+TGG + chr8_4:37800390-37800409 None:intergenic 40.0%
! TCGACTTTGAAGGTATGAGA+CGG - chr8_4:37800409-37800428 Msa1325560:intron 40.0%
TAGATGCAAGGTAACTATCG+AGG + chr8_4:37800448-37800467 None:intergenic 40.0%
ACCTGATGGTTTCAGACTTT+CGG - chr8_4:37800473-37800492 Msa1325560:intron 40.0%
GAATGCAATAGAAGAACCAC+CGG + chr8_4:37800578-37800597 None:intergenic 40.0%
GTGGTTCTTCTATTGCATTC+AGG - chr8_4:37800578-37800597 Msa1325560:intron 40.0%
AATGGAAAAGGAGAAATGGG+AGG + chr8_4:37800640-37800659 None:intergenic 40.0%
GAAGCCGGAAGTAATAACAA+TGG + chr8_4:37800658-37800677 None:intergenic 40.0%
!! ACTTTTTGGTGGCCAAGATA+TGG + chr8_4:37800686-37800705 None:intergenic 40.0%
! TGTTTTCTCCATCTTGACAG+TGG - chr8_4:37800706-37800725 Msa1325560:intron 40.0%
! GTTTTCTCCATCTTGACAGT+GGG - chr8_4:37800707-37800726 Msa1325560:intron 40.0%
GAAGAAATCTGATGACAAGG+TGG + chr8_4:37800856-37800875 None:intergenic 40.0%
TTCTTCATTCTCCTCTGCAA+CGG - chr8_4:37800938-37800957 Msa1325560:intron 40.0%
GTAATGCTGAAACTCTCTTG+AGG - chr8_4:37801091-37801110 Msa1325560:CDS 40.0%
AGTAGCGACTCTATTGTGAA+GGG + chr8_4:37801221-37801240 None:intergenic 40.0%
!!! GAGGTTTTGGAGTTAGAAAG+CGG + chr8_4:37801275-37801294 None:intergenic 40.0%
TCTTGACCTGTCAAGTTCAT+TGG - chr8_4:37801396-37801415 Msa1325560:intron 40.0%
AATCTACAGTAACCAAGGGT+TGG - chr8_4:37801549-37801568 Msa1325560:intron 40.0%
!! AGCCCATTGATTTGCCAATT+AGG - chr8_4:37801648-37801667 Msa1325560:intron 40.0%
!! GCCCATTGATTTGCCAATTA+GGG - chr8_4:37801649-37801668 Msa1325560:intron 40.0%
! GGTGTATGTTGTTTAGAGCA+TGG - chr8_4:37801705-37801724 Msa1325560:intron 40.0%
CTCACTCTATCTTTACTGGG+AGG + chr8_4:37796946-37796965 None:intergenic 45.0%
ACGAGGATCTTCTTCGACAA+TGG + chr8_4:37797178-37797197 None:intergenic 45.0%
GGTTCAACACAGATGAAACG+AGG + chr8_4:37797195-37797214 None:intergenic 45.0%
! AGGACATTTGGAACACAACC+TGG - chr8_4:37797769-37797788 Msa1325560:intron 45.0%
! ATCCGAAGCTTTTGGATACC+AGG + chr8_4:37797790-37797809 None:intergenic 45.0%
ACAATTGCGAATCACATCCG+AGG - chr8_4:37797879-37797898 Msa1325560:intron 45.0%
CAATTGCGAATCACATCCGA+GGG - chr8_4:37797880-37797899 Msa1325560:intron 45.0%
! AGCCTTTCCTTTTTGCGGTA+AGG - chr8_4:37798221-37798240 Msa1325560:intron 45.0%
TGCCTTACCGCAAAAAGGAA+AGG + chr8_4:37798226-37798245 None:intergenic 45.0%
AGACGGAGATAAGCCCTATT+TGG - chr8_4:37798332-37798351 Msa1325560:intron 45.0%
GACGGAGATAAGCCCTATTT+GGG - chr8_4:37798333-37798352 Msa1325560:intron 45.0%
!! GAATAAGTGCTGAGGCCTTT+GGG + chr8_4:37798403-37798422 None:intergenic 45.0%
!! TGAATAAGTGCTGAGGCCTT+TGG + chr8_4:37798404-37798423 None:intergenic 45.0%
TTAGGAAGAGGAAGAGTGGT+AGG + chr8_4:37798597-37798616 None:intergenic 45.0%
CAGAAAAGGTTGCTGTCAGT+GGG - chr8_4:37799775-37799794 Msa1325560:intron 45.0%
TTGCTGTCAGTGGGAAAAAG+AGG - chr8_4:37799784-37799803 Msa1325560:intron 45.0%
! AGAGGACCCAGAAGCTTTAT+CGG - chr8_4:37799802-37799821 Msa1325560:intron 45.0%
TTCGTGGCATGCTTCCAAAA+GGG - chr8_4:37799913-37799932 Msa1325560:intron 45.0%
! GTTGAACTTACCCTCCCTTT+TGG + chr8_4:37799930-37799949 None:intergenic 45.0%
TGTCTACTGTGCAAGTCTCT+TGG + chr8_4:37799969-37799988 None:intergenic 45.0%
! TGCCTGAGACTACACGTTTT+TGG - chr8_4:37800146-37800165 Msa1325560:intron 45.0%
ATTCAAGCTTGGCAGTGGAA+AGG + chr8_4:37800221-37800240 None:intergenic 45.0%
ACTAGATTCAAGCTTGGCAG+TGG + chr8_4:37800226-37800245 None:intergenic 45.0%
ACTGCCAAGCTTGAATCTAG+TGG - chr8_4:37800225-37800244 Msa1325560:intron 45.0%
CTGCCAAGCTTGAATCTAGT+GGG - chr8_4:37800226-37800245 Msa1325560:intron 45.0%
CAACCCACTAGATTCAAGCT+TGG + chr8_4:37800232-37800251 None:intergenic 45.0%
!! TCTAGTGGGTTGAATAGTGG+TGG - chr8_4:37800240-37800259 Msa1325560:intron 45.0%
CGACAACAAGGTGAATGGAT+GGG + chr8_4:37800289-37800308 None:intergenic 45.0%
! CCATCCATTCACCTTGTTGT+CGG - chr8_4:37800287-37800306 Msa1325560:intron 45.0%
!! CGGAAGGCATCGAAATAGAA+AGG + chr8_4:37800334-37800353 None:intergenic 45.0%
TGCAAGGTAACTATCGAGGA+AGG + chr8_4:37800444-37800463 None:intergenic 45.0%
! GAAAGTCTGAAACCATCAGG+TGG + chr8_4:37800474-37800493 None:intergenic 45.0%
! ACCGAAAGTCTGAAACCATC+AGG + chr8_4:37800477-37800496 None:intergenic 45.0%
TGATGGTTTCAGACTTTCGG+TGG - chr8_4:37800476-37800495 Msa1325560:intron 45.0%
!! TAGCATTGATGAGGGGTATC+TGG + chr8_4:37800782-37800801 None:intergenic 45.0%
AGATACCCCTCATCAATGCT+AGG - chr8_4:37800781-37800800 Msa1325560:intron 45.0%
GAGTATTCTGCAACCACTAC+CGG - chr8_4:37800975-37800994 Msa1325560:intron 45.0%
GCTGAAACTCTCTTGAGGAT+CGG - chr8_4:37801096-37801115 Msa1325560:CDS 45.0%
CTGAAACTCTCTTGAGGATC+GGG - chr8_4:37801097-37801116 Msa1325560:CDS 45.0%
AGGAGAACCCAAGAACTGAA+TGG - chr8_4:37801137-37801156 Msa1325560:CDS 45.0%
GTAGCGACTCTATTGTGAAG+GGG + chr8_4:37801220-37801239 None:intergenic 45.0%
GAGTAGCGACTCTATTGTGA+AGG + chr8_4:37801222-37801241 None:intergenic 45.0%
ACACGCCTGAAGGTTTATAG+CGG - chr8_4:37801599-37801618 Msa1325560:intron 45.0%
!!! TTAGTTTTTTTTTTTTTTTT+TGG + chr8_4:37799555-37799574 None:intergenic 5.0%
! GCAACAATGTCCTTGCTGTG+TGG - chr8_4:37796988-37797007 Msa1325560:three_prime_UTR 50.0%
! TGATGGTGAACCACACAGCA+AGG + chr8_4:37797001-37797020 None:intergenic 50.0%
GATGAAGGGAACGTCACTGA+TGG + chr8_4:37797018-37797037 None:intergenic 50.0%
!! TGGAAGTGTCCTGCTGAGAA+TGG + chr8_4:37797158-37797177 None:intergenic 50.0%
TTATACCGGGCCTTGAAAGC+GGG + chr8_4:37797223-37797242 None:intergenic 50.0%
GTTATACCGGGCCTTGAAAG+CGG + chr8_4:37797224-37797243 None:intergenic 50.0%
AATGCACCCATGTCCACACT+AGG + chr8_4:37797927-37797946 None:intergenic 50.0%
CATGGTGCCTTACCGCAAAA+AGG + chr8_4:37798231-37798250 None:intergenic 50.0%
! TGCGGTAAGGCACCATGAAA+TGG - chr8_4:37798234-37798253 Msa1325560:intron 50.0%
CATGAAATGGCGTAGAGGCT+CGG - chr8_4:37798247-37798266 Msa1325560:intron 50.0%
ATGCGTCTCCTTAGACCCAA+AGG - chr8_4:37798385-37798404 Msa1325560:intron 50.0%
GCAGAAAAGGTTGCTGTCAG+TGG - chr8_4:37799774-37799793 Msa1325560:intron 50.0%
CAGGAATTCTGTTCTGCAGC+TGG + chr8_4:37799872-37799891 None:intergenic 50.0%
GTTCGTGGCATGCTTCCAAA+AGG - chr8_4:37799912-37799931 Msa1325560:intron 50.0%
TGGCATGCTTCCAAAAGGGA+GGG - chr8_4:37799917-37799936 Msa1325560:intron 50.0%
AGTGGAAAGGAAGGGAACAC+CGG + chr8_4:37800208-37800227 None:intergenic 50.0%
AGCTTGGCAGTGGAAAGGAA+GGG + chr8_4:37800216-37800235 None:intergenic 50.0%
AAGCTTGGCAGTGGAAAGGA+AGG + chr8_4:37800217-37800236 None:intergenic 50.0%
!! AGTGGGTTGAATAGTGGTGG+TGG - chr8_4:37800243-37800262 Msa1325560:intron 50.0%
! GTGGGTTGAATAGTGGTGGT+GGG - chr8_4:37800244-37800263 Msa1325560:intron 50.0%
CCGACAACAAGGTGAATGGA+TGG + chr8_4:37800290-37800309 None:intergenic 50.0%
! AAGGTTTGGAGCCGACAACA+AGG + chr8_4:37800301-37800320 None:intergenic 50.0%
! ATCAGGTGGTGGTAGATGCA+AGG + chr8_4:37800460-37800479 None:intergenic 50.0%
TTGCATCTACCACCACCTGA+TGG - chr8_4:37800459-37800478 Msa1325560:intron 50.0%
! AGTCTGAAACCATCAGGTGG+TGG + chr8_4:37800471-37800490 None:intergenic 50.0%
TGGTTTCAGACTTTCGGTGG+CGG - chr8_4:37800479-37800498 Msa1325560:intron 50.0%
AATCGGCACAGCAGAGAAGA+TGG + chr8_4:37800550-37800569 None:intergenic 50.0%
AAGAACCACCGGACGTGAAT+CGG + chr8_4:37800567-37800586 None:intergenic 50.0%
CAAGATATGGTGCAGGAAGC+CGG + chr8_4:37800673-37800692 None:intergenic 50.0%
AGTGCAACCCACTGTCAAGA+TGG + chr8_4:37800717-37800736 None:intergenic 50.0%
GCACGTTAAATCCGTTGCAG+AGG + chr8_4:37800952-37800971 None:intergenic 50.0%
ATTGACAGGCCAGAGTAAGC+CGG + chr8_4:37800997-37801016 None:intergenic 50.0%
! GGGCAGGTTGAGCAATTGTT+AGG - chr8_4:37801117-37801136 Msa1325560:CDS 50.0%
AAGCTGCAAACACCAACCCT+TGG + chr8_4:37801564-37801583 None:intergenic 50.0%
!! AAGGGTTGGTGTTTGCAGCT+TGG - chr8_4:37801563-37801582 Msa1325560:intron 50.0%
GACTCTATTCACACGCCTGA+AGG - chr8_4:37801589-37801608 Msa1325560:intron 50.0%
GCGCTTCATGTGGATGATCT+GGG + chr8_4:37801625-37801644 None:intergenic 50.0%
TGCGCTTCATGTGGATGATC+TGG + chr8_4:37801626-37801645 None:intergenic 50.0%
TATACCGGGCCTTGAAAGCG+GGG + chr8_4:37797222-37797241 None:intergenic 55.0%
GGCACCATGAAATGGCGTAG+AGG - chr8_4:37798242-37798261 Msa1325560:intron 55.0%
CGAGCCTCTACGCCATTTCA+TGG + chr8_4:37798249-37798268 None:intergenic 55.0%
TGCTGAGGCCTTTGGGTCTA+AGG + chr8_4:37798396-37798415 None:intergenic 55.0%
! GGACCCAGAAGCTTTATCGG+CGG - chr8_4:37799805-37799824 Msa1325560:intron 55.0%
GTGCCGCCGATAAAGCTTCT+GGG + chr8_4:37799811-37799830 None:intergenic 55.0%
AGTGCCGCCGATAAAGCTTC+TGG + chr8_4:37799812-37799831 None:intergenic 55.0%
! AAGCTTTATCGGCGGCACTC+AGG - chr8_4:37799813-37799832 Msa1325560:intron 55.0%
GTCTCGACTGTCATACCACC+AGG + chr8_4:37799843-37799862 None:intergenic 55.0%
GTGGCATGCTTCCAAAAGGG+AGG - chr8_4:37799916-37799935 Msa1325560:intron 55.0%
GGAGCCGACAACAAGGTGAA+TGG + chr8_4:37800294-37800313 None:intergenic 55.0%
CGGCTTCCTGCACCATATCT+TGG - chr8_4:37800671-37800690 Msa1325560:intron 55.0%
TGGTGGCCAAGATATGGTGC+AGG + chr8_4:37800680-37800699 None:intergenic 55.0%
GAAGAGTGAAGACGGAGCAG+AGG + chr8_4:37800743-37800762 None:intergenic 55.0%
!! CAACCACTACCGGCTTACTC+TGG - chr8_4:37800985-37801004 Msa1325560:intron 55.0%
AACTCTCTTGAGGATCGGGC+AGG - chr8_4:37801101-37801120 Msa1325560:CDS 55.0%
! GTTGGTGTTTGCAGCTTGGC+AGG - chr8_4:37801567-37801586 Msa1325560:intron 55.0%
CTGGGCCGCTATAAACCTTC+AGG + chr8_4:37801607-37801626 None:intergenic 55.0%
GAACCTGAGCCCCGCTTTCA+AGG - chr8_4:37797210-37797229 Msa1325560:three_prime_UTR 60.0%
!! CTGCTGTGCCGATTCACGTC+CGG - chr8_4:37800556-37800575 Msa1325560:intron 60.0%
AGGCCAGAGTAAGCCGGTAG+TGG + chr8_4:37800991-37801010 None:intergenic 60.0%
! ATGGGCTGCTGCGCTTCATG+TGG + chr8_4:37801635-37801654 None:intergenic 60.0%
TGAGCCCCGCTTTCAAGGCC+CGG - chr8_4:37797215-37797234 Msa1325560:three_prime_UTR 65.0%
!! CTGTGCCGATTCACGTCCGG+TGG - chr8_4:37800559-37800578 Msa1325560:intron 65.0%
GGGCCTTGAAAGCGGGGCTC+AGG + chr8_4:37797216-37797235 None:intergenic 70.0%
CGGCACTCAGGTCGACCTGG+TGG - chr8_4:37799825-37799844 Msa1325560:intron 70.0%
CGGCGGCACTCAGGTCGACC+TGG - chr8_4:37799822-37799841 Msa1325560:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 37796910 37802096 37796910 ID=Msa1325560;Name=Msa1325560
chr8_4 mRNA 37796910 37802096 37796910 ID=Msa1325560-mRNA-1;Parent=Msa1325560;Name=Msa1325560-mRNA-1;_AED=0.12;_eAED=0.12;_QI=84|1|1|1|0.66|0.75|4|399|238
chr8_4 exon 37796910 37797425 37796910 ID=Msa1325560-mRNA-1:exon:11590;Parent=Msa1325560-mRNA-1
chr8_4 exon 37799068 37799238 37799068 ID=Msa1325560-mRNA-1:exon:11589;Parent=Msa1325560-mRNA-1
chr8_4 exon 37801050 37801235 37801050 ID=Msa1325560-mRNA-1:exon:11588;Parent=Msa1325560-mRNA-1
chr8_4 exon 37801770 37802096 37801770 ID=Msa1325560-mRNA-1:exon:11587;Parent=Msa1325560-mRNA-1
chr8_4 five_prime_UTR 37802013 37802096 37802013 ID=Msa1325560-mRNA-1:five_prime_utr;Parent=Msa1325560-mRNA-1
chr8_4 CDS 37801770 37802012 37801770 ID=Msa1325560-mRNA-1:cds;Parent=Msa1325560-mRNA-1
chr8_4 CDS 37801050 37801235 37801050 ID=Msa1325560-mRNA-1:cds;Parent=Msa1325560-mRNA-1
chr8_4 CDS 37799068 37799238 37799068 ID=Msa1325560-mRNA-1:cds;Parent=Msa1325560-mRNA-1
chr8_4 CDS 37797309 37797425 37797309 ID=Msa1325560-mRNA-1:cds;Parent=Msa1325560-mRNA-1
chr8_4 three_prime_UTR 37796910 37797308 37796910 ID=Msa1325560-mRNA-1:three_prime_utr;Parent=Msa1325560-mRNA-1
Gene Sequence

>Msa1325560

ATGTCCTTGCTGTGTGGTTCACCATCAGTGACGTTCCCTTCATCTTCTTCATTCTCTCATCACAAGAATTCAACTTCTAAATCTTCCTTTCTTGCTTCTCAATTCCCATTTTCAAACCTTTCATTATCATCTTCTTCAATTCGTACTCCATCTTTCATTGTCCATTCTCAGCAGGACACTTCCATTGTCGAAGAAGATCCTCGTTTCATCTGTGTTGAACCTGAGCCCCGCTTTCAAGGCCCGGACATTTGGAACACAACCTGGTATCCAAAAGCTTCGGATCATGTCAATACAGCGAAAACGTGGTATATTGTTGATGCTACAGATAAAATTCTTGGAAGACTAGCATCAACAATTGCGAATCACATCCGAGGGAAAAATCTAGTGACTTATACACCTAGTGTGGACATGGGTGCATTTGTAATTGTGATAAATGCAGAAAAGGTTGCTGTCAGTGGGAAAAAGAGGACCCAGAAGCTTTATCGGCGGCACTCAGGTCGACCTGGTGGTATGACAGTCGAGACATTTGACCAGCTGCAGAACAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGTGGCATGCTTCCAAAAGGGAGGCTTGGCAGGACTCTATTCACACGCCTGAAGGTTTATAGCGGCCCAGATCATCCACATGAAGCGCAGCAGCCCATTGATTTGCCAATTAGGGATAAGAGAATACAGTTGCAGAGATAA

Protein sequence

>Msa1325560

MSLLCGSPSVTFPSSSSFSHHKNSTSKSSFLASQFPFSNLSLSSSSIRTPSFIVHSQQDTSIVEEDPRFICVEPEPRFQGPDIWNTTWYPKASDHVNTAKTWYIVDATDKILGRLASTIANHIRGKNLVTYTPSVDMGAFVIVINAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQNRIPERIIEHAVRGMLPKGRLGRTLFTRLKVYSGPDHPHEAQQPIDLPIRDKRIQLQR*