Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313980 | sp|P38414|LOX1_LENCU | 76.090 | 849 | 161 | 4 | 1 | 808 | 19 | 866 | 0.0 | 1361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313980 | G7LIX7 | 82.193 | 848 | 110 | 3 | 1 | 808 | 22 | 868 | 0.0 | 1442 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0678930 | Msa1313980 | 0.803731 | 3.030765e-49 | -8.615850e-47 |
| Msa0726140 | Msa1313980 | 0.806411 | 8.336212e-50 | -8.615850e-47 |
| Msa0729800 | Msa1313980 | 0.839109 | 1.928230e-57 | -8.615850e-47 |
| Msa0733290 | Msa1313980 | 0.827076 | 1.910513e-54 | -8.615850e-47 |
| Msa0743810 | Msa1313980 | 0.814153 | 1.780758e-51 | -8.615850e-47 |
| Msa0745060 | Msa1313980 | 0.813681 | 2.262857e-51 | -8.615850e-47 |
| Msa0808010 | Msa1313980 | 0.858372 | 8.617152e-63 | -8.615850e-47 |
| Msa0808020 | Msa1313980 | 0.847806 | 9.157192e-60 | -8.615850e-47 |
| Msa0825860 | Msa1313980 | 0.822828 | 1.922554e-53 | -8.615850e-47 |
| Msa0142220 | Msa1313980 | 0.808062 | 3.723917e-50 | -8.615850e-47 |
| Msa1269670 | Msa1313980 | 0.808866 | 2.509505e-50 | -8.615850e-47 |
| Msa1270230 | Msa1313980 | 0.800779 | 1.227935e-48 | -8.615850e-47 |
| Msa1283330 | Msa1313980 | 0.800884 | 1.169109e-48 | -8.615850e-47 |
| Msa1285930 | Msa1313980 | 0.816470 | 5.438139e-52 | -8.615850e-47 |
| Msa1287810 | Msa1313980 | 0.801445 | 8.974766e-49 | -8.615850e-47 |
| Msa1313980 | Msa1320300 | 0.831925 | 1.265781e-55 | -8.615850e-47 |
| Msa1313980 | Msa1340590 | 0.818494 | 1.904092e-52 | -8.615850e-47 |
| Msa1313980 | Msa1381530 | 0.835346 | 1.769795e-56 | -8.615850e-47 |
| Msa1313980 | Msa1397580 | 0.821243 | 4.477162e-53 | -8.615850e-47 |
| Msa1313980 | Msa1422180 | 0.822944 | 1.806160e-53 | -8.615850e-47 |
| Msa0365500 | Msa1313980 | 0.809095 | 2.240956e-50 | -8.615850e-47 |
| Msa0390070 | Msa1313980 | 0.802405 | 5.699941e-49 | -8.615850e-47 |
| Msa0406120 | Msa1313980 | 0.824150 | 9.431041e-54 | -8.615850e-47 |
| Msa0452900 | Msa1313980 | 0.815282 | 1.001280e-51 | -8.615850e-47 |
| Msa0981370 | Msa1313980 | 0.805881 | 1.077476e-49 | -8.615850e-47 |
| Msa0999290 | Msa1313980 | 0.801217 | 9.992608e-49 | -8.615850e-47 |
| Msa1002330 | Msa1313980 | 0.814716 | 1.337092e-51 | -8.615850e-47 |
| Msa1016280 | Msa1313980 | 0.816480 | 5.412711e-52 | -8.615850e-47 |
| Msa1025360 | Msa1313980 | 0.823010 | 1.743044e-53 | -8.615850e-47 |
| Msa1025370 | Msa1313980 | 0.809930 | 1.483293e-50 | -8.615850e-47 |
| Msa1044830 | Msa1313980 | 0.809864 | 1.532430e-50 | -8.615850e-47 |
| Msa1044840 | Msa1313980 | 0.824432 | 8.099005e-54 | -8.615850e-47 |
| Msa1068420 | Msa1313980 | 0.800923 | 1.147350e-48 | -8.615850e-47 |
| Msa1100980 | Msa1313980 | 0.832454 | 9.365928e-56 | -8.615850e-47 |
| Msa0267000 | Msa1313980 | 0.807524 | 4.846109e-50 | -8.615850e-47 |
| Msa0267010 | Msa1313980 | 0.816856 | 4.458003e-52 | -8.615850e-47 |
| Msa0273100 | Msa1313980 | 0.804750 | 1.859088e-49 | -8.615850e-47 |
| Msa0290870 | Msa1313980 | 0.800705 | 1.271648e-48 | -8.615850e-47 |
| Msa1121200 | Msa1313980 | 0.842441 | 2.580852e-58 | -8.615850e-47 |
| Msa1135740 | Msa1313980 | 0.820099 | 8.202598e-53 | -8.615850e-47 |
| Msa1187950 | Msa1313980 | 0.801466 | 8.884711e-49 | -8.615850e-47 |
| Msa1192640 | Msa1313980 | 0.808587 | 2.877873e-50 | -8.615850e-47 |
| Msa0491590 | Msa1313980 | 0.823139 | 1.626398e-53 | -8.615850e-47 |
| Msa0596150 | Msa1313980 | 0.802286 | 6.028742e-49 | -8.615850e-47 |
| Msa0846330 | Msa1313980 | 0.822641 | 2.124945e-53 | -8.615850e-47 |
| Msa0846350 | Msa1313980 | 0.823362 | 1.442705e-53 | -8.615850e-47 |
| Msa0848960 | Msa1313980 | 0.819786 | 9.672032e-53 | -8.615850e-47 |
| Msa0865320 | Msa1313980 | 0.814454 | 1.527962e-51 | -8.615850e-47 |
| Msa0979410 | Msa1313980 | 0.813182 | 2.912838e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313980 | MtrunA17_Chr8g0342891 | 81.014 | 848 | 116 | 4 | 1 | 808 | 19 | 861 | 0.0 | 1428 |
| Msa1313980 | MtrunA17_Chr8g0342971 | 78.706 | 850 | 138 | 4 | 1 | 808 | 22 | 870 | 0.0 | 1394 |
| Msa1313980 | MtrunA17_Chr8g0342921 | 79.059 | 850 | 134 | 6 | 1 | 808 | 22 | 869 | 0.0 | 1390 |
| Msa1313980 | MtrunA17_Chr8g0342951 | 79.363 | 848 | 134 | 3 | 1 | 808 | 22 | 868 | 0.0 | 1380 |
| Msa1313980 | MtrunA17_Chr8g0344211 | 76.297 | 848 | 160 | 3 | 1 | 808 | 22 | 868 | 0.0 | 1345 |
| Msa1313980 | MtrunA17_Chr8g0342931 | 85.467 | 750 | 83 | 1 | 85 | 808 | 1 | 750 | 0.0 | 1335 |
| Msa1313980 | MtrunA17_Chr8g0343011 | 74.675 | 845 | 176 | 5 | 1 | 808 | 22 | 865 | 0.0 | 1313 |
| Msa1313980 | MtrunA17_Chr8g0342901 | 75.971 | 824 | 168 | 8 | 1 | 808 | 19 | 828 | 0.0 | 1270 |
| Msa1313980 | MtrunA17_Chr2g0329911 | 67.020 | 849 | 230 | 7 | 1 | 808 | 22 | 861 | 0.0 | 1171 |
| Msa1313980 | MtrunA17_Chr8g0342881 | 66.274 | 848 | 238 | 5 | 1 | 808 | 17 | 856 | 0.0 | 1159 |
| Msa1313980 | MtrunA17_Chr2g0329901 | 63.059 | 850 | 264 | 7 | 1 | 808 | 22 | 863 | 0.0 | 1100 |
| Msa1313980 | MtrunA17_Chr5g0406871 | 62.016 | 853 | 274 | 10 | 1 | 808 | 20 | 867 | 0.0 | 1088 |
| Msa1313980 | MtrunA17_Chr8g0343001 | 64.234 | 822 | 255 | 7 | 8 | 808 | 4 | 807 | 0.0 | 1085 |
| Msa1313980 | MtrunA17_Chr8g0342991 | 64.520 | 823 | 251 | 9 | 8 | 808 | 4 | 807 | 0.0 | 1081 |
| Msa1313980 | MtrunA17_Chr8g0343021 | 61.150 | 852 | 282 | 9 | 1 | 808 | 18 | 864 | 0.0 | 1076 |
| Msa1313980 | MtrunA17_Chr8g0343031 | 61.385 | 852 | 280 | 9 | 1 | 808 | 19 | 865 | 0.0 | 1064 |
| Msa1313980 | MtrunA17_Chr8g0342981 | 64.259 | 789 | 250 | 10 | 41 | 808 | 46 | 823 | 0.0 | 1028 |
| Msa1313980 | MtrunA17_Chr3g0120071 | 58.706 | 850 | 300 | 9 | 1 | 808 | 18 | 858 | 0.0 | 1026 |
| Msa1313980 | MtrunA17_Chr1g0191921 | 57.533 | 843 | 313 | 8 | 1 | 808 | 26 | 858 | 0.0 | 962 |
| Msa1313980 | MtrunA17_Chr7g0272791 | 55.621 | 845 | 330 | 8 | 1 | 808 | 31 | 867 | 0.0 | 942 |
| Msa1313980 | MtrunA17_Chr1g0205611 | 52.948 | 848 | 352 | 7 | 1 | 808 | 16 | 856 | 0.0 | 912 |
| Msa1313980 | MtrunA17_Chr8g0344241 | 81.772 | 395 | 72 | 0 | 414 | 808 | 67 | 461 | 0.0 | 696 |
| Msa1313980 | MtrunA17_Chr8g0344201 | 45.747 | 776 | 380 | 10 | 67 | 807 | 157 | 926 | 0.0 | 688 |
| Msa1313980 | MtrunA17_Chr3g0118651 | 44.156 | 770 | 388 | 13 | 74 | 808 | 141 | 903 | 0.0 | 634 |
| Msa1313980 | MtrunA17_Chr8g0377101 | 43.775 | 763 | 384 | 12 | 84 | 808 | 161 | 916 | 0.0 | 622 |
| Msa1313980 | MtrunA17_Chr3g0118641 | 43.229 | 768 | 398 | 11 | 74 | 808 | 140 | 902 | 0.0 | 621 |
| Msa1313980 | MtrunA17_Chr8g0338451 | 42.913 | 762 | 375 | 15 | 73 | 791 | 106 | 850 | 0.0 | 613 |
| Msa1313980 | MtrunA17_Chr4g0047281 | 42.781 | 755 | 397 | 11 | 73 | 807 | 155 | 894 | 0.0 | 612 |
| Msa1313980 | MtrunA17_Chr4g0033171 | 45.621 | 708 | 345 | 12 | 135 | 808 | 24 | 725 | 0.0 | 603 |
| Msa1313980 | MtrunA17_Chr3g0118621 | 44.488 | 762 | 383 | 13 | 82 | 808 | 109 | 865 | 0.0 | 587 |
| Msa1313980 | MtrunA17_Chr6g0471951 | 40.164 | 488 | 249 | 5 | 286 | 769 | 32 | 480 | 1.27e-127 | 390 |
| Msa1313980 | MtrunA17_Chr7g0218231 | 61.290 | 124 | 47 | 1 | 455 | 577 | 9 | 132 | 3.63e-44 | 155 |
| Msa1313980 | MtrunA17_Chr6g0468081 | 59.551 | 89 | 35 | 1 | 490 | 577 | 1 | 89 | 7.85e-28 | 107 |
| Msa1313980 | MtrunA17_Chr4g0047271 | 40.659 | 91 | 54 | 0 | 717 | 807 | 1 | 91 | 6.72e-16 | 73.9 |
| Msa1313980 | MtrunA17_Chr3g0137991 | 40.157 | 127 | 56 | 4 | 684 | 808 | 1 | 109 | 2.85e-15 | 72.4 |
| Msa1313980 | MtrunA17_Chr7g0272781 | 45.312 | 64 | 34 | 1 | 699 | 762 | 7 | 69 | 3.35e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313980 | AT1G55020.1 | 53.436 | 844 | 345 | 9 | 1 | 808 | 28 | 859 | 0.0 | 913 |
| Msa1313980 | AT3G22400.1 | 52.927 | 854 | 347 | 11 | 1 | 808 | 42 | 886 | 0.0 | 903 |
| Msa1313980 | AT1G72520.1 | 45.170 | 766 | 385 | 10 | 74 | 808 | 165 | 926 | 0.0 | 682 |
| Msa1313980 | AT1G17420.1 | 45.254 | 769 | 379 | 10 | 74 | 808 | 159 | 919 | 0.0 | 681 |
| Msa1313980 | AT3G45140.1 | 43.855 | 773 | 393 | 17 | 69 | 808 | 132 | 896 | 0.0 | 620 |
| Msa1313980 | AT3G45140.2 | 44.005 | 759 | 385 | 16 | 83 | 808 | 3 | 754 | 0.0 | 616 |
| Msa1313980 | AT1G67560.1 | 42.484 | 765 | 390 | 13 | 84 | 808 | 163 | 917 | 0.0 | 592 |
Find 181 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTACCTCCATACCAATTT+TGG | 0.084230 | 8_4:-12286785 | Msa1313980:CDS |
| CTTCATGCAGCTGTTAATTT+TGG | 0.086154 | 8_4:-12283862 | Msa1313980:CDS |
| TTCCTCAAATATGGAAATAT+TGG | 0.163250 | 8_4:+12285053 | None:intergenic |
| TGAATGGGACAGTGAGAATA+TGG | 0.226471 | 8_4:-12286731 | Msa1313980:CDS |
| ATTCTGAACTCCAAGCATTT+TGG | 0.229489 | 8_4:-12284002 | Msa1313980:CDS |
| AGAGGTGGATTCAATATTAT+TGG | 0.260882 | 8_4:-12289145 | Msa1313980:CDS |
| AGAGATATGAAGGTGATTTA+TGG | 0.264238 | 8_4:-12283630 | Msa1313980:CDS |
| AATAAATGCAACAGATAAAA+AGG | 0.277597 | 8_4:-12285030 | Msa1313980:CDS |
| GATTGCCCTGCTCCCAAAAT+TGG | 0.282496 | 8_4:+12286772 | None:intergenic |
| TATATTGAAAATTTAATGTT+AGG | 0.283116 | 8_4:-12286691 | Msa1313980:CDS |
| GTATGTAAAGTCTGTTGTTT+TGG | 0.286020 | 8_4:+12285090 | None:intergenic |
| CATCAACAGGGTGATTGTTT+TGG | 0.293355 | 8_4:-12284930 | Msa1313980:CDS |
| TCTTTAGATGGAGATACTAT+TGG | 0.303679 | 8_4:+12283426 | None:intergenic |
| TCCTCAAATATGGAAATATT+GGG | 0.314968 | 8_4:+12285054 | None:intergenic |
| CTGCTGATGGACTTGAGATA+TGG | 0.317415 | 8_4:-12284095 | Msa1313980:CDS |
| GCTTCCATACCTTCGCTTGC+AGG | 0.326111 | 8_4:+12284885 | None:intergenic |
| TTCTGATTCACAACCATTAG+AGG | 0.338910 | 8_4:-12283605 | Msa1313980:CDS |
| GTTTAGGCGGTGGAAACTTA+AGG | 0.344731 | 8_4:+12285653 | None:intergenic |
| CTTCCAAGAGATGAATCATT+TGG | 0.351011 | 8_4:-12285906 | Msa1313980:CDS |
| CTTTAGATGGAGATACTATT+GGG | 0.355917 | 8_4:+12283427 | None:intergenic |
| AGAGTTGCATACAAAATTGA+TGG | 0.358547 | 8_4:+12286618 | None:intergenic |
| AAACCATCAGCTTCTTTAGA+TGG | 0.362019 | 8_4:+12283414 | None:intergenic |
| ACATCTAGCTTGCTCTTTGA+TGG | 0.364156 | 8_4:+12285315 | None:intergenic |
| TTAGAGGCTTTCAAGAGGTT+TGG | 0.365383 | 8_4:-12283589 | Msa1313980:CDS |
| GAGTCATTGAGGAACCGATA+TGG | 0.369296 | 8_4:-12283517 | Msa1313980:CDS |
| TTTAGAATCTACATTCTTGA+TGG | 0.369671 | 8_4:-12284546 | Msa1313980:CDS |
| GTTGATGCAAAAGAATGTTT+TGG | 0.371877 | 8_4:-12289212 | None:intergenic |
| ACCCAATATTTCCATATTTG+AGG | 0.372183 | 8_4:-12285055 | Msa1313980:CDS |
| GCTAAGTACCCCACATCAAC+AGG | 0.377744 | 8_4:-12284943 | Msa1313980:CDS |
| AAGGTATGGAAGCTTCTATT+TGG | 0.378101 | 8_4:-12284875 | Msa1313980:CDS |
| AGGAAGTGGAACGGGGAAAG+TGG | 0.386743 | 8_4:-12286833 | Msa1313980:CDS |
| AAGCTTGCACTACCCTCATA+TGG | 0.387715 | 8_4:-12283897 | Msa1313980:CDS |
| GGAAGCAGAAGTTTATGAAT+AGG | 0.393945 | 8_4:+12284635 | None:intergenic |
| ACAGTGACTCCACCCATGTT+TGG | 0.394461 | 8_4:+12285243 | None:intergenic |
| GGCAAGTAAATATTACTAAC+AGG | 0.394935 | 8_4:+12284906 | None:intergenic |
| TCCTGTCTATAATAGACTAA+TGG | 0.403045 | 8_4:+12286433 | None:intergenic |
| AGTGAGAATATGGGAATTCC+AGG | 0.404522 | 8_4:-12286721 | Msa1313980:CDS |
| AAGCTAGATGTCCAACTCTA+TGG | 0.405470 | 8_4:-12285303 | Msa1313980:CDS |
| TGGCCAAATGATTCATCTCT+TGG | 0.405736 | 8_4:+12285903 | None:intergenic |
| TTAACTGCAGATTGTAATTG+AGG | 0.411276 | 8_4:+12285822 | None:intergenic |
| ATATTTGTAGGAAGTGGAAC+GGG | 0.413377 | 8_4:-12286841 | Msa1313980:intron |
| ATTGTCTGCTGTAATATATA+AGG | 0.418973 | 8_4:-12284507 | Msa1313980:CDS |
| TGCCCTTGCAAGGAATATCT+TGG | 0.419901 | 8_4:-12284585 | Msa1313980:CDS |
| CATTCATCATTGCAACAAAT+AGG | 0.421489 | 8_4:-12284676 | Msa1313980:CDS |
| GTCAATCCTTCCTCACTAGA+AGG | 0.421532 | 8_4:+12283463 | None:intergenic |
| TTTAGGCGGTGGAAACTTAA+GGG | 0.422323 | 8_4:+12285654 | None:intergenic |
| AACCTCTTGAAAGCCTCTAA+TGG | 0.427115 | 8_4:+12283592 | None:intergenic |
| CCACCGCCTAAACTGATTCA+AGG | 0.433268 | 8_4:-12285643 | Msa1313980:intron |
| GCTAAGCTAGCTCTCTTGTC+AGG | 0.434435 | 8_4:+12286319 | None:intergenic |
| CGAAGACCGTGTGGAGAAGC+TGG | 0.442950 | 8_4:+12284144 | None:intergenic |
| AGTTTATTACCTTCTCTAGC+TGG | 0.443653 | 8_4:+12286232 | None:intergenic |
| AAAATTGATGGTTCCATGGT+TGG | 0.446383 | 8_4:+12286630 | None:intergenic |
| GAAGCAGAAGTTTATGAATA+GGG | 0.447872 | 8_4:+12284636 | None:intergenic |
| TGGAGAGAAGTTGTAGAGGT+GGG | 0.451733 | 8_4:-12283982 | Msa1313980:CDS |
| AGCTTAGCTCGTCCAGTAGT+TGG | 0.456400 | 8_4:-12286304 | Msa1313980:CDS |
| CTTGCCTGCAAGCGAAGGTA+TGG | 0.457505 | 8_4:-12284889 | Msa1313980:CDS |
| GAAGAATTGAAGACATTAAG+AGG | 0.458819 | 8_4:-12286412 | Msa1313980:CDS |
| TTCTATTTGGCTACTTGCCA+AGG | 0.462750 | 8_4:-12284862 | Msa1313980:CDS |
| AAATTGATGGTTCCATGGTT+GGG | 0.463017 | 8_4:+12286631 | None:intergenic |
| GTACTTAGCTCAATGGCTAA+TGG | 0.468967 | 8_4:+12284957 | None:intergenic |
| CTGCTGTAATATATAAGGAT+TGG | 0.470472 | 8_4:-12284502 | Msa1313980:CDS |
| AGGAGACACATGCCAGAGAA+AGG | 0.474205 | 8_4:-12283793 | Msa1313980:CDS |
| CTTTATCCTTCTAGTGAGGA+AGG | 0.474629 | 8_4:-12283469 | Msa1313980:CDS |
| TGCTGATGGACTTGAGATAT+GGG | 0.474674 | 8_4:-12284094 | Msa1313980:CDS |
| GGCGCTTTGAGCTGCAGTGA+GGG | 0.477090 | 8_4:+12289180 | None:intergenic |
| GTGCTGAAGCAATCCATATG+AGG | 0.478585 | 8_4:+12283884 | None:intergenic |
| ACACATTATCAAAAGACTTC+AGG | 0.479420 | 8_4:-12285464 | Msa1313980:intron |
| GGAAGTGGAACGGGGAAAGT+GGG | 0.481448 | 8_4:-12286832 | Msa1313980:CDS |
| CGGTCTTCGCCTTCTCATAG+AGG | 0.481738 | 8_4:-12284130 | Msa1313980:CDS |
| CAACTTCTCTCCAAAATGCT+TGG | 0.486060 | 8_4:+12283992 | None:intergenic |
| GGAAGTAGATCGTTTCTTGA+AGG | 0.490093 | 8_4:-12286811 | Msa1313980:CDS |
| AAACAATCACCCTGTTGATG+TGG | 0.493464 | 8_4:+12284933 | None:intergenic |
| CTATTTGTTGCAATGATGAA+TGG | 0.493695 | 8_4:+12284677 | None:intergenic |
| TTAGAATCTACATTCTTGAT+GGG | 0.493744 | 8_4:-12284545 | Msa1313980:CDS |
| CCCTGCTCCCAAAATTGGTA+TGG | 0.494487 | 8_4:+12286777 | None:intergenic |
| ACATTAAGAGGAGATGGAAC+AGG | 0.494851 | 8_4:-12286400 | Msa1313980:CDS |
| ACAAGACCTCTATGACTGTA+AGG | 0.495650 | 8_4:+12283686 | None:intergenic |
| GAATGGGACAGTGAGAATAT+GGG | 0.496555 | 8_4:-12286730 | Msa1313980:CDS |
| GCATATTCACAGGCCCATAT+CGG | 0.498648 | 8_4:+12283503 | None:intergenic |
| GAAGGATAAAGCAAAGTGTA+AGG | 0.498776 | 8_4:+12283481 | None:intergenic |
| TCCATTAGTCTATTATAGAC+AGG | 0.500444 | 8_4:-12286434 | Msa1313980:CDS |
| ATTTACAATTACATAAGCCT+TGG | 0.500523 | 8_4:+12284845 | None:intergenic |
| AGTCATTGAGGAACCGATAT+GGG | 0.501042 | 8_4:-12283516 | Msa1313980:CDS |
| TACTCAGCAGACCCTTTCTC+TGG | 0.505281 | 8_4:+12283781 | None:intergenic |
| TCAAGTCCATCAGCAGCATA+AGG | 0.506385 | 8_4:+12284102 | None:intergenic |
| CATCTAGCTTGCTCTTTGAT+GGG | 0.506745 | 8_4:+12285316 | None:intergenic |
| CAGGGACTCTTACGAACTGA+TGG | 0.512065 | 8_4:-12285685 | Msa1313980:CDS |
| TTGAAGACATTAAGAGGAGA+TGG | 0.512821 | 8_4:-12286406 | Msa1313980:CDS |
| TACCAAGATATTCCTTGCAA+GGG | 0.514564 | 8_4:+12284583 | None:intergenic |
| TGCCTCATGATCTACTCAAA+AGG | 0.515076 | 8_4:-12284460 | Msa1313980:intron |
| GTTTAAGATGCAAACTTGCT+CGG | 0.515286 | 8_4:-12283929 | Msa1313980:CDS |
| GAACAGGAGAGCGTAAAGAA+TGG | 0.517756 | 8_4:-12286384 | Msa1313980:CDS |
| GACACTGCCGTGTCCTTCAT+CGG | 0.518994 | 8_4:-12289100 | Msa1313980:CDS |
| AATGGAGCTGGTGTTTCACT+TGG | 0.519813 | 8_4:+12286451 | None:intergenic |
| GCGCTAGATCCTCCAACTAC+TGG | 0.520456 | 8_4:+12286292 | None:intergenic |
| TTTGCAAGGGAGATGATTGC+TGG | 0.521676 | 8_4:-12285496 | Msa1313980:CDS |
| GAAGTTGTAGAGGTGGGTCA+TGG | 0.521933 | 8_4:-12283976 | Msa1313980:CDS |
| CTTCAAGTGTCAAACTTACA+AGG | 0.523269 | 8_4:+12286659 | None:intergenic |
| TACCTTGGACAGAGATATGA+AGG | 0.525105 | 8_4:-12283640 | Msa1313980:CDS |
| ACTGCAGCTCAAAGCGCCAC+TGG | 0.527539 | 8_4:-12289175 | Msa1313980:CDS |
| AGTGTACCTTGAATCAGTTT+AGG | 0.529269 | 8_4:+12285637 | None:intergenic |
| TTACCAAGATATTCCTTGCA+AGG | 0.529680 | 8_4:+12284582 | None:intergenic |
| ATCTAGAGGAGTGGCTGTTG+AGG | 0.536928 | 8_4:-12284169 | Msa1313980:intron |
| AACAGGAGAGCGTAAAGAAT+GGG | 0.537820 | 8_4:-12286383 | Msa1313980:CDS |
| GGTGGATTCAATATTATTGG+TGG | 0.538012 | 8_4:-12289142 | Msa1313980:CDS |
| GGAGACACATGCCAGAGAAA+GGG | 0.539357 | 8_4:-12283792 | Msa1313980:CDS |
| GATTATCCTTATGCTGCTGA+TGG | 0.544469 | 8_4:-12284108 | Msa1313980:CDS |
| CACCTTCATATCTCTGTCCA+AGG | 0.546796 | 8_4:+12283638 | None:intergenic |
| CCTTGAATCAGTTTAGGCGG+TGG | 0.547037 | 8_4:+12285643 | None:intergenic |
| ACCTACAGAACGGCCGATGA+AGG | 0.550896 | 8_4:+12289087 | None:intergenic |
| AACAATCACCCTGTTGATGT+GGG | 0.551951 | 8_4:+12284934 | None:intergenic |
| TTGATTGTTATCTAGAGGAG+TGG | 0.555634 | 8_4:-12284178 | Msa1313980:intron |
| GCTTCTGATGAGCAATACCT+TGG | 0.559094 | 8_4:-12283655 | Msa1313980:CDS |
| CAAATGATTCATCTCTTGGA+AGG | 0.568278 | 8_4:+12285907 | None:intergenic |
| TTAGCTCGTCCAGTAGTTGG+AGG | 0.569869 | 8_4:-12286301 | Msa1313980:CDS |
| AGAACATTTACAACCAAACA+TGG | 0.569964 | 8_4:-12285256 | Msa1313980:CDS |
| CTATAATAGACTAATGGAGC+TGG | 0.570360 | 8_4:+12286439 | None:intergenic |
| ATACAAAATTGATGGTTCCA+TGG | 0.570678 | 8_4:+12286626 | None:intergenic |
| ATTTACTTGCCTGCAAGCGA+AGG | 0.570767 | 8_4:-12284894 | Msa1313980:CDS |
| TATGGGCCGCTATCAAGTCA+TGG | 0.574898 | 8_4:-12284077 | Msa1313980:CDS |
| TTAACCGACCAACTAAAAGT+AGG | 0.576113 | 8_4:-12283813 | Msa1313980:CDS |
| ATGTGGGGTACTTAGCTCAA+TGG | 0.577440 | 8_4:+12284950 | None:intergenic |
| TTGGAGAGAAGTTGTAGAGG+TGG | 0.579539 | 8_4:-12283983 | Msa1313980:CDS |
| TGAGTAGTAATCAAATTCCC+TGG | 0.580601 | 8_4:-12283367 | Msa1313980:three_prime_UTR |
| ATCACCAACTCATCAGCCAT+TGG | 0.586097 | 8_4:-12284812 | Msa1313980:intron |
| AATATGGAAATATTGGGTCA+TGG | 0.586499 | 8_4:+12285060 | None:intergenic |
| AAAGTGTAAGGCATATTCAC+AGG | 0.586701 | 8_4:+12283493 | None:intergenic |
| ATGGGCCGCTATCAAGTCAT+GGG | 0.590891 | 8_4:-12284076 | Msa1313980:CDS |
| AGGGACTCTTACGAACTGAT+GGG | 0.591465 | 8_4:-12285684 | Msa1313980:CDS |
| ACGCATCTTCTTTGCCAACA+AGG | 0.592928 | 8_4:-12286563 | Msa1313980:intron |
| CGTACCAATGGCTGATGAGT+TGG | 0.593900 | 8_4:+12284808 | None:intergenic |
| TTGAGGCAAAGCTCATACAA+AGG | 0.594476 | 8_4:-12283549 | Msa1313980:CDS |
| GACTGATGAAGAATTTGCAA+GGG | 0.596706 | 8_4:-12285509 | Msa1313980:CDS |
| GAAAGTCTGAAGACTTCAAG+TGG | 0.597190 | 8_4:+12285883 | None:intergenic |
| TGCTCCCAAAATTGGTATGG+AGG | 0.597280 | 8_4:+12286780 | None:intergenic |
| AACAAATAGGCATCTTAGTG+TGG | 0.599024 | 8_4:-12284663 | Msa1313980:CDS |
| GCCACTGGTTTAATCAGAGG+TGG | 0.601073 | 8_4:-12289160 | Msa1313980:CDS |
| GGAACAATGATGAGTCATTG+AGG | 0.601690 | 8_4:-12283528 | Msa1313980:CDS |
| CATATTTGTAGGAAGTGGAA+CGG | 0.602210 | 8_4:-12286842 | Msa1313980:intron |
| TGAATATTAATGCCCTTGCA+AGG | 0.602637 | 8_4:-12284595 | Msa1313980:CDS |
| AAGGATAATCCTCTATGAGA+AGG | 0.603529 | 8_4:+12284121 | None:intergenic |
| TTCATCGTGTCACGATAATG+TGG | 0.604387 | 8_4:+12284614 | None:intergenic |
| GAGGATCCAGCTTCTCCACA+CGG | 0.604589 | 8_4:-12284150 | Msa1313980:CDS |
| CACATGTCTACATATACAAG+AGG | 0.604658 | 8_4:+12283267 | None:intergenic |
| TTATGATGTCTACAATGACT+TGG | 0.604912 | 8_4:-12286347 | Msa1313980:CDS |
| ACACACATAATAACATGACC+AGG | 0.607072 | 8_4:+12283349 | None:intergenic |
| GAATATCTTGGTAAATGCAG+AGG | 0.607968 | 8_4:-12284573 | Msa1313980:CDS |
| AGCGCCACTGGTTTAATCAG+AGG | 0.615697 | 8_4:-12289163 | Msa1313980:CDS |
| GCCTTGCCTTACCCTCGAAG+GGG | 0.618029 | 8_4:-12286271 | Msa1313980:CDS |
| TACTGACCTTACAGTCATAG+AGG | 0.618070 | 8_4:-12283692 | Msa1313980:CDS |
| AATATCTTGGTAAATGCAGA+GGG | 0.619741 | 8_4:-12284572 | Msa1313980:CDS |
| AGAACGGCCGATGAAGGACA+CGG | 0.619779 | 8_4:+12289093 | None:intergenic |
| TGCTGAAGCAATCCATATGA+GGG | 0.621259 | 8_4:+12283885 | None:intergenic |
| GAGGAAGGATTGACTTGCAG+AGG | 0.621733 | 8_4:-12283454 | Msa1313980:CDS |
| TTTGGGCAATACTCATATGG+AGG | 0.622122 | 8_4:-12283844 | Msa1313980:CDS |
| CTTGAAGATATTCCCAACCA+TGG | 0.622142 | 8_4:-12286643 | Msa1313980:CDS |
| TTGTATTGTCACCATAGAGT+TGG | 0.623246 | 8_4:+12285292 | None:intergenic |
| GGTAGGAAACCAGCTAGAGA+AGG | 0.625377 | 8_4:-12286241 | Msa1313980:intron |
| TCCACCTCTGATTAAACCAG+TGG | 0.632725 | 8_4:+12289159 | None:intergenic |
| TCTCCATCTAAAGAAGCTGA+TGG | 0.639261 | 8_4:-12283417 | Msa1313980:exon |
| TTTGCTTTATCCTTCTAGTG+AGG | 0.639494 | 8_4:-12283473 | Msa1313980:CDS |
| AACCATTAGAGGCTTTCAAG+AGG | 0.639639 | 8_4:-12283594 | Msa1313980:CDS |
| GAGAGCGTAAAGAATGGGAA+AGG | 0.641398 | 8_4:-12286378 | Msa1313980:CDS |
| TTCAACCCATGACTTGATAG+CGG | 0.647677 | 8_4:+12284071 | None:intergenic |
| TGACTGATGAAGAATTTGCA+AGG | 0.653058 | 8_4:-12285510 | Msa1313980:CDS |
| ACAATCACCCTGTTGATGTG+GGG | 0.653114 | 8_4:+12284935 | None:intergenic |
| ATGAGAAGGCGAAGACCGTG+TGG | 0.654996 | 8_4:+12284135 | None:intergenic |
| GTACCTTGAATCAGTTTAGG+CGG | 0.656994 | 8_4:+12285640 | None:intergenic |
| CAGTCATAGAGGTCTTGTCA+AGG | 0.657780 | 8_4:-12283681 | Msa1313980:CDS |
| GAGTAGTGAATCAATCTGCA+TGG | 0.658160 | 8_4:-12285534 | Msa1313980:intron |
| TATGATGTCTACAATGACTT+GGG | 0.664133 | 8_4:-12286346 | Msa1313980:CDS |
| CCTTGCCTTACCCTCGAAGG+GGG | 0.668892 | 8_4:-12286270 | Msa1313980:CDS |
| GCTTTCTAAGAACTTCCAGA+AGG | 0.669156 | 8_4:-12283752 | Msa1313980:CDS |
| CATTTACAACCAAACATGGG+TGG | 0.671656 | 8_4:-12285252 | Msa1313980:CDS |
| GAACATTTACAACCAAACAT+GGG | 0.672173 | 8_4:-12285255 | Msa1313980:CDS |
| CACACATAATAACATGACCA+GGG | 0.698967 | 8_4:+12283350 | None:intergenic |
| CTAAGTACCCCACATCAACA+GGG | 0.700125 | 8_4:-12284942 | Msa1313980:CDS |
| GGGACTCTTACGAACTGATG+GGG | 0.701261 | 8_4:-12285683 | Msa1313980:CDS |
| GTGATTTGAAGAATGCTACA+TGG | 0.707488 | 8_4:-12283954 | Msa1313980:CDS |
| TATTTGTAGGAAGTGGAACG+GGG | 0.708447 | 8_4:-12286840 | Msa1313980:intron |
| ATTTGAAGAATGCTACATGG+TGG | 0.753052 | 8_4:-12283951 | Msa1313980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAATTTTATGGATTTA+GGG | + | chr8_4:12283658-12283677 | None:intergenic | 10.0% |
| !!! | AAATTTAATTTTATGGATTT+AGG | + | chr8_4:12283659-12283678 | None:intergenic | 10.0% |
| !!! | CAATTTTTCAAAATATTTTA+AGG | + | chr8_4:12284150-12284169 | None:intergenic | 10.0% |
| !! | TAAAGTTTGAAAATTATTAA+CGG | - | chr8_4:12284214-12284233 | Msa1313980:intron | 10.0% |
| !!! | TTTTTTATGAAATTTTGATT+TGG | - | chr8_4:12284241-12284260 | Msa1313980:intron | 10.0% |
| !!! | ATTTTATTTCAATTTATTTG+GGG | + | chr8_4:12284309-12284328 | None:intergenic | 10.0% |
| !!! | AAAAGCATAAATATATTTTT+TGG | - | chr8_4:12284497-12284516 | Msa1313980:CDS | 10.0% |
| !!! | TTAAGTTTTATTAGAAAAAA+AGG | + | chr8_4:12284850-12284869 | None:intergenic | 10.0% |
| !! | GATATTTGATTATTATTTAA+AGG | + | chr8_4:12285427-12285446 | None:intergenic | 10.0% |
| !! | TATATTGAAAATTTAATGTT+AGG | - | chr8_4:12285798-12285817 | Msa1313980:CDS | 10.0% |
| !! | TATATTTATTAGTTAAAATG+AGG | - | chr8_4:12288081-12288100 | Msa1313980:intron | 10.0% |
| !!! | GGAAACTAAATTTAATTTTA+TGG | + | chr8_4:12283666-12283685 | None:intergenic | 15.0% |
| !! | AAGTTGTTTAATAGTATAAT+TGG | - | chr8_4:12284408-12284427 | Msa1313980:intron | 15.0% |
| !! | AGTTGTTTAATAGTATAATT+GGG | - | chr8_4:12284409-12284428 | Msa1313980:intron | 15.0% |
| !! | TTATACTTCTTAAATGATAA+AGG | - | chr8_4:12284471-12284490 | Msa1313980:CDS | 15.0% |
| !! | ATGATATGTATATATATGTA+TGG | + | chr8_4:12284571-12284590 | None:intergenic | 15.0% |
| !! | TTATTTGTATTGAAAATTGA+GGG | - | chr8_4:12284674-12284693 | Msa1313980:CDS | 15.0% |
| !!! | ATTTTTACATAAACTAATCT+TGG | - | chr8_4:12285550-12285569 | Msa1313980:intron | 15.0% |
| !!! | TATATTTTAGTGTCAAATTT+TGG | + | chr8_4:12286002-12286021 | None:intergenic | 15.0% |
| !! | AACAGTTATGTATATTATTT+AGG | - | chr8_4:12286293-12286312 | Msa1313980:CDS | 15.0% |
| !! | CTTTGATATTATAGATATTA+TGG | + | chr8_4:12286396-12286415 | None:intergenic | 15.0% |
| !! | TATATATATATATAGAGGAA+AGG | + | chr8_4:12286419-12286438 | None:intergenic | 15.0% |
| !!! | ATCATTTTGTAAGAAAATTA+TGG | + | chr8_4:12287500-12287519 | None:intergenic | 15.0% |
| !!! | ATAATTTTCTTACAAAATGA+TGG | - | chr8_4:12287499-12287518 | Msa1313980:intron | 15.0% |
| !!! | ATATTTTAATATGGAGAAGT+GGG | - | chr8_4:12283861-12283880 | Msa1313980:CDS | 20.0% |
| !!! | AACATATAAATGTTGCTTTT+TGG | - | chr8_4:12284275-12284294 | Msa1313980:intron | 20.0% |
| !!! | AGCATAAATATATTTTTTGG+TGG | - | chr8_4:12284500-12284519 | Msa1313980:CDS | 20.0% |
| !!! | ATAAATATATTTTTTGGTGG+TGG | - | chr8_4:12284503-12284522 | Msa1313980:CDS | 20.0% |
| !!! | TACATATCATGTTTTTTTTG+AGG | - | chr8_4:12284581-12284600 | Msa1313980:CDS | 20.0% |
| !!! | ACATATCATGTTTTTTTTGA+GGG | - | chr8_4:12284582-12284601 | Msa1313980:CDS | 20.0% |
| !! | GTTATTTGTATTGAAAATTG+AGG | - | chr8_4:12284673-12284692 | Msa1313980:CDS | 20.0% |
| !!! | TTTAGCTTTACATTTAAAAC+TGG | + | chr8_4:12285164-12285183 | None:intergenic | 20.0% |
| !!! | AGTTTTAAATGTAAAGCTAA+AGG | - | chr8_4:12285163-12285182 | Msa1313980:intron | 20.0% |
| !!! | TATATTTTAGCAATGGTTAA+TGG | + | chr8_4:12285452-12285471 | None:intergenic | 20.0% |
| !! | TAACCATTGCTAAAATATAT+AGG | - | chr8_4:12285453-12285472 | Msa1313980:intron | 20.0% |
| !!! | ATTCCTATATATTTTAGCAA+TGG | + | chr8_4:12285459-12285478 | None:intergenic | 20.0% |
| !!! | ACAGATTTGATTTTCAATTT+CGG | + | chr8_4:12285625-12285644 | None:intergenic | 20.0% |
| !!! | TATTTTCATAATTACCTTGT+TGG | + | chr8_4:12285943-12285962 | None:intergenic | 20.0% |
| !! | GAAATGTATTATAACTTGAT+AGG | - | chr8_4:12286351-12286370 | Msa1313980:CDS | 20.0% |
| !!! | TCATCAAAATTTTTAAACTC+TGG | + | chr8_4:12286709-12286728 | None:intergenic | 20.0% |
| !! | AAAAAAATATCACAGATCTT+TGG | - | chr8_4:12286909-12286928 | Msa1313980:intron | 20.0% |
| !! | AATAAATGCAACAGATAAAA+AGG | - | chr8_4:12287459-12287478 | Msa1313980:intron | 20.0% |
| !!! | AGAGCTCACATATTTTAATA+TGG | - | chr8_4:12283852-12283871 | Msa1313980:CDS | 25.0% |
| !!! | CATATTTTAATATGGAGAAG+TGG | - | chr8_4:12283860-12283879 | Msa1313980:CDS | 25.0% |
| ! | ATATTGCATATTATATGCAG+AGG | + | chr8_4:12283908-12283927 | None:intergenic | 25.0% |
| ! | ACAATGCATAATATATGCAA+AGG | + | chr8_4:12284548-12284567 | None:intergenic | 25.0% |
| !! | TTGAAAATTGAGGGTAATTT+TGG | - | chr8_4:12284683-12284702 | Msa1313980:CDS | 25.0% |
| !! | TTATCTCTTTCAACACTTTT+GGG | + | chr8_4:12284723-12284742 | None:intergenic | 25.0% |
| !! | ATTATCTCTTTCAACACTTT+TGG | + | chr8_4:12284724-12284743 | None:intergenic | 25.0% |
| ! | GATGATGAAAGTAAAAACAT+TGG | + | chr8_4:12284873-12284892 | None:intergenic | 25.0% |
| ! | AAAGAAAAATGAAGAGAAAG+AGG | - | chr8_4:12285293-12285312 | Msa1313980:CDS | 25.0% |
| ! | AAAAAAAAAAAGGCAAGTTG+TGG | - | chr8_4:12285345-12285364 | Msa1313980:intron | 25.0% |
| !! | ATACGAGATTCATTTTGAAT+GGG | - | chr8_4:12285743-12285762 | Msa1313980:intron | 25.0% |
| !! | TTTTCAATATAAAATGCTCC+TGG | + | chr8_4:12285789-12285808 | None:intergenic | 25.0% |
| ! | ATTGCATAAATGAAGTGAAA+TGG | - | chr8_4:12286317-12286336 | Msa1313980:CDS | 25.0% |
| !! | GATAGGTAATGTTTTCTTAA+CGG | - | chr8_4:12286368-12286387 | Msa1313980:CDS | 25.0% |
| ! | CAGCAACAATTATTTATTCA+TGG | + | chr8_4:12287304-12287323 | None:intergenic | 25.0% |
| ! | TCCTCAAATATGGAAATATT+GGG | + | chr8_4:12287438-12287457 | None:intergenic | 25.0% |
| ! | TTCCTCAAATATGGAAATAT+TGG | + | chr8_4:12287439-12287458 | None:intergenic | 25.0% |
| !!! | GCATTTATTTTCCTCAAATA+TGG | + | chr8_4:12287448-12287467 | None:intergenic | 25.0% |
| ! | ATTTACAATTACATAAGCCT+TGG | + | chr8_4:12287647-12287666 | None:intergenic | 25.0% |
| !! | TTTAGAATCTACATTCTTGA+TGG | - | chr8_4:12287943-12287962 | Msa1313980:intron | 25.0% |
| ! | TTAGAATCTACATTCTTGAT+GGG | - | chr8_4:12287944-12287963 | Msa1313980:intron | 25.0% |
| ! | ATTGTCTGCTGTAATATATA+AGG | - | chr8_4:12287982-12288001 | Msa1313980:intron | 25.0% |
| !! | GCAACAATAATTTTAAACCT+TGG | - | chr8_4:12288232-12288251 | Msa1313980:intron | 25.0% |
| ! | ATTCTTTGATTGTTATCTAG+AGG | - | chr8_4:12288306-12288325 | Msa1313980:intron | 25.0% |
| !!! | TCAGTAAGTGTATCATTTTT+TGG | + | chr8_4:12288783-12288802 | None:intergenic | 25.0% |
| ! | AGAGGTGGATTCAATATTAT+TGG | - | chr8_4:12283344-12283363 | Msa1313980:three_prime_UTR | 30.0% |
| ATAGTTTAACGACTGAGATT+GGG | + | chr8_4:12283565-12283584 | None:intergenic | 30.0% | |
| ATAAAGGGATAACTGCATTA+TGG | + | chr8_4:12283717-12283736 | None:intergenic | 30.0% | |
| ! | AAATTGAGGGTAATTTTGGA+AGG | - | chr8_4:12284687-12284706 | Msa1313980:CDS | 30.0% |
| ATCAAAGATTTCGTGAACTA+AGG | + | chr8_4:12284818-12284837 | None:intergenic | 30.0% | |
| TTTCATCATCATTAGAACTG+AGG | - | chr8_4:12284883-12284902 | Msa1313980:CDS | 30.0% | |
| AAATTGATTGTTGAACCTTG+TGG | - | chr8_4:12284906-12284925 | Msa1313980:CDS | 30.0% | |
| TGTTTATAATAGTGACCAGA+GGG | + | chr8_4:12284966-12284985 | None:intergenic | 30.0% | |
| TTGTTTATAATAGTGACCAG+AGG | + | chr8_4:12284967-12284986 | None:intergenic | 30.0% | |
| ! | GTTTTGCTTATAATAGTGAC+CGG | - | chr8_4:12285079-12285098 | Msa1313980:CDS | 30.0% |
| AAAACTGGTGAGAAGAAATT+TGG | + | chr8_4:12285149-12285168 | None:intergenic | 30.0% | |
| TGGTTGAACATATATTAAGC+TGG | - | chr8_4:12285508-12285527 | Msa1313980:CDS | 30.0% | |
| CAAATCTGTGACATATTTGT+AGG | - | chr8_4:12285636-12285655 | Msa1313980:intron | 30.0% | |
| ! | TATTACCTCCATACCAATTT+TGG | - | chr8_4:12285704-12285723 | Msa1313980:intron | 30.0% |
| ! | ATTACCTCCATACCAATTTT+GGG | - | chr8_4:12285705-12285724 | Msa1313980:intron | 30.0% |
| ! | CATACGAGATTCATTTTGAA+TGG | - | chr8_4:12285742-12285761 | Msa1313980:intron | 30.0% |
| ! | ATACAAAATTGATGGTTCCA+TGG | + | chr8_4:12285866-12285885 | None:intergenic | 30.0% |
| AGAGTTGCATACAAAATTGA+TGG | + | chr8_4:12285874-12285893 | None:intergenic | 30.0% | |
| ! | TCAATTTTGTATGCAACTCT+TGG | - | chr8_4:12285874-12285893 | Msa1313980:CDS | 30.0% |
| ! | TCCATTAGTCTATTATAGAC+AGG | - | chr8_4:12286055-12286074 | Msa1313980:intron | 30.0% |
| TCCTGTCTATAATAGACTAA+TGG | + | chr8_4:12286059-12286078 | None:intergenic | 30.0% | |
| GAAGAATTGAAGACATTAAG+AGG | - | chr8_4:12286077-12286096 | Msa1313980:intron | 30.0% | |
| TTATGATGTCTACAATGACT+TGG | - | chr8_4:12286142-12286161 | Msa1313980:intron | 30.0% | |
| TATGATGTCTACAATGACTT+GGG | - | chr8_4:12286143-12286162 | Msa1313980:intron | 30.0% | |
| TTAACTGCAGATTGTAATTG+AGG | + | chr8_4:12286670-12286689 | None:intergenic | 30.0% | |
| GATGTTCGTTCATTATATGA+AGG | - | chr8_4:12286727-12286746 | Msa1313980:CDS | 30.0% | |
| !! | ATTTGACTAAGAGCATTAGT+AGG | + | chr8_4:12286766-12286785 | None:intergenic | 30.0% |
| !!! | TGAAGTCTTTTGATAATGTG+TGG | + | chr8_4:12287026-12287045 | None:intergenic | 30.0% |
| ACACATTATCAAAAGACTTC+AGG | - | chr8_4:12287025-12287044 | Msa1313980:intron | 30.0% | |
| AGAACATTTACAACCAAACA+TGG | - | chr8_4:12287233-12287252 | Msa1313980:intron | 30.0% | |
| GAACATTTACAACCAAACAT+GGG | - | chr8_4:12287234-12287253 | Msa1313980:intron | 30.0% | |
| TTGCTGCTATATTGCAAAAT+AGG | - | chr8_4:12287318-12287337 | Msa1313980:intron | 30.0% | |
| !! | GTATGTAAAGTCTGTTGTTT+TGG | + | chr8_4:12287402-12287421 | None:intergenic | 30.0% |
| AATATGGAAATATTGGGTCA+TGG | + | chr8_4:12287432-12287451 | None:intergenic | 30.0% | |
| ACCCAATATTTCCATATTTG+AGG | - | chr8_4:12287434-12287453 | Msa1313980:intron | 30.0% | |
| GGCAAGTAAATATTACTAAC+AGG | + | chr8_4:12287586-12287605 | None:intergenic | 30.0% | |
| TTATTATCAACATGTGTGAC+AGG | - | chr8_4:12287765-12287784 | Msa1313980:intron | 30.0% | |
| ! | CTATTTGTTGCAATGATGAA+TGG | + | chr8_4:12287815-12287834 | None:intergenic | 30.0% |
| CATTCATCATTGCAACAAAT+AGG | - | chr8_4:12287813-12287832 | Msa1313980:intron | 30.0% | |
| GAAGCAGAAGTTTATGAATA+GGG | + | chr8_4:12287856-12287875 | None:intergenic | 30.0% | |
| AATATCTTGGTAAATGCAGA+GGG | - | chr8_4:12287917-12287936 | Msa1313980:intron | 30.0% | |
| CTGCTGTAATATATAAGGAT+TGG | - | chr8_4:12287987-12288006 | Msa1313980:intron | 30.0% | |
| CCATGATATAATGTCTTGTA+AGG | + | chr8_4:12288058-12288077 | None:intergenic | 30.0% | |
| CCTTACAAGACATTATATCA+TGG | - | chr8_4:12288055-12288074 | Msa1313980:intron | 30.0% | |
| !!! | TTTTTAGGTCTAAACATCTG+CGG | - | chr8_4:12288151-12288170 | Msa1313980:intron | 30.0% |
| GCTATAAAATACAAGTGATG+CGG | + | chr8_4:12288183-12288202 | None:intergenic | 30.0% | |
| !!! | CAACAATATGTTTTTAGCCA+AGG | + | chr8_4:12288252-12288271 | None:intergenic | 30.0% |
| ! | TTCATGCAGCTGTTAATTTT+GGG | - | chr8_4:12288628-12288647 | Msa1313980:intron | 30.0% |
| ! | AATTTTGGGCAATACTCATA+TGG | - | chr8_4:12288642-12288661 | Msa1313980:intron | 30.0% |
| AGAGATATGAAGGTGATTTA+TGG | - | chr8_4:12288859-12288878 | Msa1313980:intron | 30.0% | |
| AAAAAAGTTGGCTGAAATTG+AGG | - | chr8_4:12288923-12288942 | Msa1313980:intron | 30.0% | |
| CTTTAGATGGAGATACTATT+GGG | + | chr8_4:12289065-12289084 | None:intergenic | 30.0% | |
| TCTTTAGATGGAGATACTAT+TGG | + | chr8_4:12289066-12289085 | None:intergenic | 30.0% | |
| ! | GGTGGATTCAATATTATTGG+TGG | - | chr8_4:12283347-12283366 | Msa1313980:three_prime_UTR | 35.0% |
| !! | GTAGGTCAATTGATTTGAGT+AGG | + | chr8_4:12283543-12283562 | None:intergenic | 35.0% |
| GATAGTTTAACGACTGAGAT+TGG | + | chr8_4:12283566-12283585 | None:intergenic | 35.0% | |
| ATCTCAGTCGTTAAACTATC+AGG | - | chr8_4:12283566-12283585 | Msa1313980:CDS | 35.0% | |
| ACACACACACGTTACATAAA+GGG | + | chr8_4:12283732-12283751 | None:intergenic | 35.0% | |
| ! | TGAGATTAACTCAGTTGGTA+GGG | + | chr8_4:12283931-12283950 | None:intergenic | 35.0% |
| TACCAACTGAGTTAATCTCA+CGG | - | chr8_4:12283931-12283950 | Msa1313980:CDS | 35.0% | |
| ATGCACTACTAACGAAAAGA+CGG | - | chr8_4:12284180-12284199 | Msa1313980:intron | 35.0% | |
| !!! | ATATATTTTTTGGTGGTGGC+CGG | - | chr8_4:12284507-12284526 | Msa1313980:CDS | 35.0% |
| ATAATATATGCAAAGGTCCG+GGG | + | chr8_4:12284541-12284560 | None:intergenic | 35.0% | |
| CATAATATATGCAAAGGTCC+GGG | + | chr8_4:12284542-12284561 | None:intergenic | 35.0% | |
| GCATAATATATGCAAAGGTC+CGG | + | chr8_4:12284543-12284562 | None:intergenic | 35.0% | |
| ATATATGAAGCTATGACCAG+AGG | + | chr8_4:12284788-12284807 | None:intergenic | 35.0% | |
| ATGTTATGATATACACCCTC+TGG | - | chr8_4:12284948-12284967 | Msa1313980:CDS | 35.0% | |
| TGTGACATATTTGTAGGAAG+TGG | - | chr8_4:12285642-12285661 | Msa1313980:intron | 35.0% | |
| CATATTTGTAGGAAGTGGAA+CGG | - | chr8_4:12285647-12285666 | Msa1313980:CDS | 35.0% | |
| ATATTTGTAGGAAGTGGAAC+GGG | - | chr8_4:12285648-12285667 | Msa1313980:CDS | 35.0% | |
| CTTCAAGTGTCAAACTTACA+AGG | + | chr8_4:12285833-12285852 | None:intergenic | 35.0% | |
| ! | AAATTGATGGTTCCATGGTT+GGG | + | chr8_4:12285861-12285880 | None:intergenic | 35.0% |
| ! | AAAATTGATGGTTCCATGGT+TGG | + | chr8_4:12285862-12285881 | None:intergenic | 35.0% |
| CTATAATAGACTAATGGAGC+TGG | + | chr8_4:12286053-12286072 | None:intergenic | 35.0% | |
| TTGAAGACATTAAGAGGAGA+TGG | - | chr8_4:12286083-12286102 | Msa1313980:intron | 35.0% | |
| AGTTTATTACCTTCTCTAGC+TGG | + | chr8_4:12286260-12286279 | None:intergenic | 35.0% | |
| CAAATGATTCATCTCTTGGA+AGG | + | chr8_4:12286585-12286604 | None:intergenic | 35.0% | |
| CTTCCAAGAGATGAATCATT+TGG | - | chr8_4:12286583-12286602 | Msa1313980:CDS | 35.0% | |
| GTTCGTTCATTATATGAAGG+TGG | - | chr8_4:12286730-12286749 | Msa1313980:CDS | 35.0% | |
| TTATCCCTATACCATTGTTC+AGG | - | chr8_4:12286785-12286804 | Msa1313980:CDS | 35.0% | |
| TATCCCTATACCATTGTTCA+GGG | - | chr8_4:12286786-12286805 | Msa1313980:CDS | 35.0% | |
| AGTGTACCTTGAATCAGTTT+AGG | + | chr8_4:12286855-12286874 | None:intergenic | 35.0% | |
| TGACTGATGAAGAATTTGCA+AGG | - | chr8_4:12286979-12286998 | Msa1313980:intron | 35.0% | |
| GACTGATGAAGAATTTGCAA+GGG | - | chr8_4:12286980-12286999 | Msa1313980:intron | 35.0% | |
| AATTGTAGCATGCAATGATG+AGG | + | chr8_4:12287141-12287160 | None:intergenic | 35.0% | |
| TTGCATGCTACAATTAACGT+AGG | - | chr8_4:12287146-12287165 | Msa1313980:intron | 35.0% | |
| TTGTATTGTCACCATAGAGT+TGG | + | chr8_4:12287200-12287219 | None:intergenic | 35.0% | |
| AAGGTATGGAAGCTTCTATT+TGG | - | chr8_4:12287614-12287633 | Msa1313980:intron | 35.0% | |
| GTCAATAGAATTCGTACCAA+TGG | + | chr8_4:12287696-12287715 | None:intergenic | 35.0% | |
| AACAAATAGGCATCTTAGTG+TGG | - | chr8_4:12287826-12287845 | Msa1313980:intron | 35.0% | |
| GGAAGCAGAAGTTTATGAAT+AGG | + | chr8_4:12287857-12287876 | None:intergenic | 35.0% | |
| TGAATATTAATGCCCTTGCA+AGG | - | chr8_4:12287894-12287913 | Msa1313980:intron | 35.0% | |
| TACCAAGATATTCCTTGCAA+GGG | + | chr8_4:12287909-12287928 | None:intergenic | 35.0% | |
| TTACCAAGATATTCCTTGCA+AGG | + | chr8_4:12287910-12287929 | None:intergenic | 35.0% | |
| GAATATCTTGGTAAATGCAG+AGG | - | chr8_4:12287916-12287935 | Msa1313980:intron | 35.0% | |
| !! | TACCTTTTGAGTAGATCATG+AGG | + | chr8_4:12288034-12288053 | None:intergenic | 35.0% |
| !!! | ACGAGACATCAAGCTTTTTT+AGG | - | chr8_4:12288136-12288155 | Msa1313980:intron | 35.0% |
| TCTCTGCATTAACTATGATC+AGG | - | chr8_4:12288206-12288225 | Msa1313980:intron | 35.0% | |
| TTGATTGTTATCTAGAGGAG+TGG | - | chr8_4:12288311-12288330 | Msa1313980:intron | 35.0% | |
| AAGGATAATCCTCTATGAGA+AGG | + | chr8_4:12288371-12288390 | None:intergenic | 35.0% | |
| ! | ATTCTGAACTCCAAGCATTT+TGG | - | chr8_4:12288487-12288506 | Msa1313980:intron | 35.0% |
| !! | ATTTTGGAGAGAAGTTGTAG+AGG | - | chr8_4:12288503-12288522 | Msa1313980:intron | 35.0% |
| GTGATTTGAAGAATGCTACA+TGG | - | chr8_4:12288535-12288554 | Msa1313980:intron | 35.0% | |
| ATTTGAAGAATGCTACATGG+TGG | - | chr8_4:12288538-12288557 | Msa1313980:intron | 35.0% | |
| ! | GTTTAAGATGCAAACTTGCT+CGG | - | chr8_4:12288560-12288579 | Msa1313980:intron | 35.0% |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | chr8_4:12288627-12288646 | Msa1313980:intron | 35.0% |
| !! | TACTTTTAGTTGGTCGGTTA+AGG | + | chr8_4:12288677-12288696 | None:intergenic | 35.0% |
| TTAACCGACCAACTAAAAGT+AGG | - | chr8_4:12288676-12288695 | Msa1313980:intron | 35.0% | |
| !! | ATGTGTCTCCTACTTTTAGT+TGG | + | chr8_4:12288687-12288706 | None:intergenic | 35.0% |
| TTCTGATTCACAACCATTAG+AGG | - | chr8_4:12288884-12288903 | Msa1313980:intron | 35.0% | |
| CAAGAGGTTTGGAAAAAAGT+TGG | - | chr8_4:12288911-12288930 | Msa1313980:intron | 35.0% | |
| AAAGTGTAAGGCATATTCAC+AGG | + | chr8_4:12288999-12289018 | None:intergenic | 35.0% | |
| GAAGGATAAAGCAAAGTGTA+AGG | + | chr8_4:12289011-12289030 | None:intergenic | 35.0% | |
| TTTGCTTTATCCTTCTAGTG+AGG | - | chr8_4:12289016-12289035 | Msa1313980:intron | 35.0% | |
| AAACCATCAGCTTCTTTAGA+TGG | + | chr8_4:12289078-12289097 | None:intergenic | 35.0% | |
| TGAGTAGTAATCAAATTCCC+TGG | - | chr8_4:12289122-12289141 | Msa1313980:CDS | 35.0% | |
| CACACATAATAACATGACCA+GGG | + | chr8_4:12289142-12289161 | None:intergenic | 35.0% | |
| ACACACATAATAACATGACC+AGG | + | chr8_4:12289143-12289162 | None:intergenic | 35.0% | |
| TTTAACGACTGAGATTGGGT+AGG | + | chr8_4:12283561-12283580 | None:intergenic | 40.0% | |
| CACACACACACGTTACATAA+AGG | + | chr8_4:12283733-12283752 | None:intergenic | 40.0% | |
| TGCATATTATATGCAGAGGC+CGG | + | chr8_4:12283904-12283923 | None:intergenic | 40.0% | |
| GTGAGATTAACTCAGTTGGT+AGG | + | chr8_4:12283932-12283951 | None:intergenic | 40.0% | |
| ACCAACTGAGTTAATCTCAC+GGG | - | chr8_4:12283932-12283951 | Msa1313980:CDS | 40.0% | |
| TGCACTACTAACGAAAAGAC+GGG | - | chr8_4:12284181-12284200 | Msa1313980:intron | 40.0% | |
| !! | CTCTTTCAACACTTTTGGGT+TGG | + | chr8_4:12284719-12284738 | None:intergenic | 40.0% |
| ! | TGAACCTTGTGGTGTACTTT+TGG | - | chr8_4:12284917-12284936 | Msa1313980:CDS | 40.0% |
| TGCTTATAATAGTGACCGGA+TGG | - | chr8_4:12285083-12285102 | Msa1313980:CDS | 40.0% | |
| ATGGTGAGCATGTTCTACTT+TGG | - | chr8_4:12285102-12285121 | Msa1313980:intron | 40.0% | |
| TTGGCATCCACTTCTCAAAT+TGG | - | chr8_4:12285121-12285140 | Msa1313980:intron | 40.0% | |
| TGGCATCCACTTCTCAAATT+GGG | - | chr8_4:12285122-12285141 | Msa1313980:intron | 40.0% | |
| TTTGGACCCAATTTGAGAAG+TGG | + | chr8_4:12285131-12285150 | None:intergenic | 40.0% | |
| GGATTCACTTCTATCATCCA+GGG | + | chr8_4:12285204-12285223 | None:intergenic | 40.0% | |
| AGGATTCACTTCTATCATCC+AGG | + | chr8_4:12285205-12285224 | None:intergenic | 40.0% | |
| ! | TTTGCATTTGCTGACAGAAG+AGG | + | chr8_4:12285225-12285244 | None:intergenic | 40.0% |
| AATGCAAACCATAGATGACG+CGG | - | chr8_4:12285237-12285256 | Msa1313980:CDS | 40.0% | |
| !! | GAGAGCATCACGAAACTATA+TGG | + | chr8_4:12285373-12285392 | None:intergenic | 40.0% |
| TTCCTGAACTGTGTCAAAGT+GGG | + | chr8_4:12285485-12285504 | None:intergenic | 40.0% | |
| TTTCCTGAACTGTGTCAAAG+TGG | + | chr8_4:12285486-12285505 | None:intergenic | 40.0% | |
| TTGACACAGTTCAGGAAACT+TGG | - | chr8_4:12285488-12285507 | Msa1313980:CDS | 40.0% | |
| TATTTGTAGGAAGTGGAACG+GGG | - | chr8_4:12285649-12285668 | Msa1313980:CDS | 40.0% | |
| GGAAGTAGATCGTTTCTTGA+AGG | - | chr8_4:12285678-12285697 | Msa1313980:CDS | 40.0% | |
| TGAATGGGACAGTGAGAATA+TGG | - | chr8_4:12285758-12285777 | Msa1313980:intron | 40.0% | |
| GAATGGGACAGTGAGAATAT+GGG | - | chr8_4:12285759-12285778 | Msa1313980:intron | 40.0% | |
| AGTGAGAATATGGGAATTCC+AGG | - | chr8_4:12285768-12285787 | Msa1313980:intron | 40.0% | |
| CTTGAAGATATTCCCAACCA+TGG | - | chr8_4:12285846-12285865 | Msa1313980:CDS | 40.0% | |
| ACATTAAGAGGAGATGGAAC+AGG | - | chr8_4:12286089-12286108 | Msa1313980:intron | 40.0% | |
| ! | AACAGGAGAGCGTAAAGAAT+GGG | - | chr8_4:12286106-12286125 | Msa1313980:intron | 40.0% |
| CAGATCCAAAAAGTGAGAGT+CGG | - | chr8_4:12286545-12286564 | Msa1313980:intron | 40.0% | |
| TGGCCAAATGATTCATCTCT+TGG | + | chr8_4:12286589-12286608 | None:intergenic | 40.0% | |
| GAAAGTCTGAAGACTTCAAG+TGG | + | chr8_4:12286609-12286628 | None:intergenic | 40.0% | |
| AGTCCCTGAACAATGGTATA+GGG | + | chr8_4:12286792-12286811 | None:intergenic | 40.0% | |
| TTTAGGCGGTGGAAACTTAA+GGG | + | chr8_4:12286838-12286857 | None:intergenic | 40.0% | |
| GTACCTTGAATCAGTTTAGG+CGG | + | chr8_4:12286852-12286871 | None:intergenic | 40.0% | |
| GAGTAGTGAATCAATCTGCA+TGG | - | chr8_4:12286955-12286974 | Msa1313980:intron | 40.0% | |
| !! | CATCTAGCTTGCTCTTTGAT+GGG | + | chr8_4:12287176-12287195 | None:intergenic | 40.0% |
| !! | ACATCTAGCTTGCTCTTTGA+TGG | + | chr8_4:12287177-12287196 | None:intergenic | 40.0% |
| AAGCTAGATGTCCAACTCTA+TGG | - | chr8_4:12287186-12287205 | Msa1313980:intron | 40.0% | |
| CATTTACAACCAAACATGGG+TGG | - | chr8_4:12287237-12287256 | Msa1313980:intron | 40.0% | |
| GTACTTAGCTCAATGGCTAA+TGG | + | chr8_4:12287535-12287554 | None:intergenic | 40.0% | |
| AACAATCACCCTGTTGATGT+GGG | + | chr8_4:12287558-12287577 | None:intergenic | 40.0% | |
| AAACAATCACCCTGTTGATG+TGG | + | chr8_4:12287559-12287578 | None:intergenic | 40.0% | |
| ! | CATCAACAGGGTGATTGTTT+TGG | - | chr8_4:12287559-12287578 | Msa1313980:intron | 40.0% |
| TTCTATTTGGCTACTTGCCA+AGG | - | chr8_4:12287627-12287646 | Msa1313980:intron | 40.0% | |
| TTCATCGTGTCACGATAATG+TGG | + | chr8_4:12287878-12287897 | None:intergenic | 40.0% | |
| ! | GATTGGAATTTTGCAGAGCA+AGG | - | chr8_4:12288004-12288023 | Msa1313980:intron | 40.0% |
| TGCCTCATGATCTACTCAAA+AGG | - | chr8_4:12288029-12288048 | Msa1313980:intron | 40.0% | |
| GATTATCCTTATGCTGCTGA+TGG | - | chr8_4:12288381-12288400 | Msa1313980:intron | 40.0% | |
| !! | TGCTGATGGACTTGAGATAT+GGG | - | chr8_4:12288395-12288414 | Msa1313980:intron | 40.0% |
| TTCAACCCATGACTTGATAG+CGG | + | chr8_4:12288421-12288440 | None:intergenic | 40.0% | |
| CAACTTCTCTCCAAAATGCT+TGG | + | chr8_4:12288500-12288519 | None:intergenic | 40.0% | |
| TGCTGAAGCAATCCATATGA+GGG | + | chr8_4:12288607-12288626 | None:intergenic | 40.0% | |
| TTTGGGCAATACTCATATGG+AGG | - | chr8_4:12288645-12288664 | Msa1313980:intron | 40.0% | |
| !! | GTCTCCTACTTTTAGTTGGT+CGG | + | chr8_4:12288683-12288702 | None:intergenic | 40.0% |
| ! | GCTTTCTAAGAACTTCCAGA+AGG | - | chr8_4:12288737-12288756 | Msa1313980:intron | 40.0% |
| !!! | ACTTCCAGAAGGTGTTTTTG+AGG | - | chr8_4:12288748-12288767 | Msa1313980:intron | 40.0% |
| TTGTCCTCAAAAACACCTTC+TGG | + | chr8_4:12288755-12288774 | None:intergenic | 40.0% | |
| TACTGACCTTACAGTCATAG+AGG | - | chr8_4:12288797-12288816 | Msa1313980:intron | 40.0% | |
| ACAAGACCTCTATGACTGTA+AGG | + | chr8_4:12288806-12288825 | None:intergenic | 40.0% | |
| TACCTTGGACAGAGATATGA+AGG | - | chr8_4:12288849-12288868 | Msa1313980:intron | 40.0% | |
| AACCATTAGAGGCTTTCAAG+AGG | - | chr8_4:12288895-12288914 | Msa1313980:intron | 40.0% | |
| AACCTCTTGAAAGCCTCTAA+TGG | + | chr8_4:12288900-12288919 | None:intergenic | 40.0% | |
| TTAGAGGCTTTCAAGAGGTT+TGG | - | chr8_4:12288900-12288919 | Msa1313980:intron | 40.0% | |
| TTGAGGCAAAGCTCATACAA+AGG | - | chr8_4:12288940-12288959 | Msa1313980:intron | 40.0% | |
| GGAACAATGATGAGTCATTG+AGG | - | chr8_4:12288961-12288980 | Msa1313980:intron | 40.0% | |
| AGTCATTGAGGAACCGATAT+GGG | - | chr8_4:12288973-12288992 | Msa1313980:intron | 40.0% | |
| CTTTATCCTTCTAGTGAGGA+AGG | - | chr8_4:12289020-12289039 | Msa1313980:intron | 40.0% | |
| TCTCCATCTAAAGAAGCTGA+TGG | - | chr8_4:12289072-12289091 | Msa1313980:intron | 40.0% | |
| TCCACCTCTGATTAAACCAG+TGG | + | chr8_4:12283333-12283352 | None:intergenic | 45.0% | |
| TCAACCTGAGACCTACAGAA+CGG | + | chr8_4:12283415-12283434 | None:intergenic | 45.0% | |
| GTTAACTATACCATCCGCAG+CGG | + | chr8_4:12283447-12283466 | None:intergenic | 45.0% | |
| ATATGGAGAAGTGGGATGTC+TGG | - | chr8_4:12283869-12283888 | Msa1313980:CDS | 45.0% | |
| TATGGAGAAGTGGGATGTCT+GGG | - | chr8_4:12283870-12283889 | Msa1313980:CDS | 45.0% | |
| CATATTATATGCAGAGGCCG+GGG | + | chr8_4:12283902-12283921 | None:intergenic | 45.0% | |
| GCATATTATATGCAGAGGCC+GGG | + | chr8_4:12283903-12283922 | None:intergenic | 45.0% | |
| TCCCGTGAGATTAACTCAGT+TGG | + | chr8_4:12283936-12283955 | None:intergenic | 45.0% | |
| TCACGCAAAGAAAGATCCTC+TGG | - | chr8_4:12284769-12284788 | Msa1313980:intron | 45.0% | |
| ! | CACTCCAAAAGTACACCACA+AGG | + | chr8_4:12284924-12284943 | None:intergenic | 45.0% |
| !! | CTTGTGGTGTACTTTTGGAG+TGG | - | chr8_4:12284922-12284941 | Msa1313980:CDS | 45.0% |
| AGTAGAACATGCTCACCATC+CGG | + | chr8_4:12285101-12285120 | None:intergenic | 45.0% | |
| ATCCCACTTTGACACAGTTC+AGG | - | chr8_4:12285480-12285499 | Msa1313980:CDS | 45.0% | |
| TGCTCCCAAAATTGGTATGG+AGG | + | chr8_4:12285712-12285731 | None:intergenic | 45.0% | |
| !! | TCCATACCAATTTTGGGAGC+AGG | - | chr8_4:12285711-12285730 | Msa1313980:intron | 45.0% |
| !! | CCATACCAATTTTGGGAGCA+GGG | - | chr8_4:12285712-12285731 | Msa1313980:intron | 45.0% |
| ACGCATCTTCTTTGCCAACA+AGG | - | chr8_4:12285926-12285945 | Msa1313980:CDS | 45.0% | |
| AATGGAGCTGGTGTTTCACT+TGG | + | chr8_4:12286041-12286060 | None:intergenic | 45.0% | |
| ! | GAACAGGAGAGCGTAAAGAA+TGG | - | chr8_4:12286105-12286124 | Msa1313980:intron | 45.0% |
| ! | GAGAGCGTAAAGAATGGGAA+AGG | - | chr8_4:12286111-12286130 | Msa1313980:intron | 45.0% |
| !! | TCACTCCGACTCTCACTTTT+TGG | + | chr8_4:12286553-12286572 | None:intergenic | 45.0% |
| GAGTCCCTGAACAATGGTAT+AGG | + | chr8_4:12286793-12286812 | None:intergenic | 45.0% | |
| TCGTAAGAGTCCCTGAACAA+TGG | + | chr8_4:12286799-12286818 | None:intergenic | 45.0% | |
| AGGGACTCTTACGAACTGAT+GGG | - | chr8_4:12286805-12286824 | Msa1313980:CDS | 45.0% | |
| GTTTAGGCGGTGGAAACTTA+AGG | + | chr8_4:12286839-12286858 | None:intergenic | 45.0% | |
| TTTGCAAGGGAGATGATTGC+TGG | - | chr8_4:12286993-12287012 | Msa1313980:intron | 45.0% | |
| ! | ATGTGGGGTACTTAGCTCAA+TGG | + | chr8_4:12287542-12287561 | None:intergenic | 45.0% |
| CTAAGTACCCCACATCAACA+GGG | - | chr8_4:12287547-12287566 | Msa1313980:intron | 45.0% | |
| ACAATCACCCTGTTGATGTG+GGG | + | chr8_4:12287557-12287576 | None:intergenic | 45.0% | |
| ATTTACTTGCCTGCAAGCGA+AGG | - | chr8_4:12287595-12287614 | Msa1313980:intron | 45.0% | |
| ATCACCAACTCATCAGCCAT+TGG | - | chr8_4:12287677-12287696 | Msa1313980:intron | 45.0% | |
| TGCCCTTGCAAGGAATATCT+TGG | - | chr8_4:12287904-12287923 | Msa1313980:intron | 45.0% | |
| TCAAGTCCATCAGCAGCATA+AGG | + | chr8_4:12288390-12288409 | None:intergenic | 45.0% | |
| !! | CTGCTGATGGACTTGAGATA+TGG | - | chr8_4:12288394-12288413 | Msa1313980:intron | 45.0% |
| TTGGAGAGAAGTTGTAGAGG+TGG | - | chr8_4:12288506-12288525 | Msa1313980:intron | 45.0% | |
| TGGAGAGAAGTTGTAGAGGT+GGG | - | chr8_4:12288507-12288526 | Msa1313980:intron | 45.0% | |
| AAGCTTGCACTACCCTCATA+TGG | - | chr8_4:12288592-12288611 | Msa1313980:intron | 45.0% | |
| GTGCTGAAGCAATCCATATG+AGG | + | chr8_4:12288608-12288627 | None:intergenic | 45.0% | |
| ! | CAGTCATAGAGGTCTTGTCA+AGG | - | chr8_4:12288808-12288827 | Msa1313980:intron | 45.0% |
| GCTTCTGATGAGCAATACCT+TGG | - | chr8_4:12288834-12288853 | Msa1313980:intron | 45.0% | |
| CACCTTCATATCTCTGTCCA+AGG | + | chr8_4:12288854-12288873 | None:intergenic | 45.0% | |
| GAGTCATTGAGGAACCGATA+TGG | - | chr8_4:12288972-12288991 | Msa1313980:intron | 45.0% | |
| GCATATTCACAGGCCCATAT+CGG | + | chr8_4:12288989-12289008 | None:intergenic | 45.0% | |
| GTCAATCCTTCCTCACTAGA+AGG | + | chr8_4:12289029-12289048 | None:intergenic | 45.0% | |
| !! | TAATTAATGATAAAATAAAA+GGG | + | chr8_4:12283687-12283706 | None:intergenic | 5.0% |
| !! | TTAATTAATGATAAAATAAA+AGG | + | chr8_4:12283688-12283707 | None:intergenic | 5.0% |
| !!! | AATTTTATTTCAATTTATTT+GGG | + | chr8_4:12284310-12284329 | None:intergenic | 5.0% |
| !!! | AAATTTTATTTCAATTTATT+TGG | + | chr8_4:12284311-12284330 | None:intergenic | 5.0% |
| !! | TCTATAAAAAAAAAAAAAAA+AGG | - | chr8_4:12285335-12285354 | Msa1313980:intron | 5.0% |
| !! | ATATTTGATTATTATTTAAA+GGG | + | chr8_4:12285426-12285445 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+AGG | + | chr8_4:12286424-12286443 | None:intergenic | 5.0% |
| !!! | AATTATATATATTTTTTAAC+AGG | - | chr8_4:12287372-12287391 | Msa1313980:intron | 5.0% |
| !! | AGCGCCACTGGTTTAATCAG+AGG | - | chr8_4:12283326-12283345 | Msa1313980:three_prime_UTR | 50.0% |
| !! | GCCACTGGTTTAATCAGAGG+TGG | - | chr8_4:12283329-12283348 | Msa1313980:three_prime_UTR | 50.0% |
| GTTGATTAGTGCTACCGCTG+CGG | - | chr8_4:12283430-12283449 | Msa1313980:CDS | 50.0% | |
| !! | TTCACGAGAGAGCATCTTCG+CGG | + | chr8_4:12283998-12284017 | None:intergenic | 50.0% |
| !! | TTCACGAGAGAGCATCTTCG+CGG | + | chr8_4:12283998-12284017 | None:intergenic | 50.0% |
| AACCATAGATGACGCGGTTG+TGG | - | chr8_4:12285243-12285262 | Msa1313980:CDS | 50.0% | |
| ACCATAGATGACGCGGTTGT+GGG | - | chr8_4:12285244-12285263 | Msa1313980:CDS | 50.0% | |
| CCCTGCTCCCAAAATTGGTA+TGG | + | chr8_4:12285715-12285734 | None:intergenic | 50.0% | |
| GATTGCCCTGCTCCCAAAAT+TGG | + | chr8_4:12285720-12285739 | None:intergenic | 50.0% | |
| ! | GCTAAGCTAGCTCTCTTGTC+AGG | + | chr8_4:12286173-12286192 | None:intergenic | 50.0% |
| AGCTTAGCTCGTCCAGTAGT+TGG | - | chr8_4:12286185-12286204 | Msa1313980:intron | 50.0% | |
| TTAGCTCGTCCAGTAGTTGG+AGG | - | chr8_4:12286188-12286207 | Msa1313980:intron | 50.0% | |
| GGTAGGAAACCAGCTAGAGA+AGG | - | chr8_4:12286248-12286267 | Msa1313980:CDS | 50.0% | |
| CAGGGACTCTTACGAACTGA+TGG | - | chr8_4:12286804-12286823 | Msa1313980:CDS | 50.0% | |
| GGGACTCTTACGAACTGATG+GGG | - | chr8_4:12286806-12286825 | Msa1313980:CDS | 50.0% | |
| CCTTGAATCAGTTTAGGCGG+TGG | + | chr8_4:12286849-12286868 | None:intergenic | 50.0% | |
| ! | CCACCGCCTAAACTGATTCA+AGG | - | chr8_4:12286846-12286865 | Msa1313980:intron | 50.0% |
| ACAGTGACTCCACCCATGTT+TGG | + | chr8_4:12287249-12287268 | None:intergenic | 50.0% | |
| GCTAAGTACCCCACATCAAC+AGG | - | chr8_4:12287546-12287565 | Msa1313980:intron | 50.0% | |
| CGTACCAATGGCTGATGAGT+TGG | + | chr8_4:12287684-12287703 | None:intergenic | 50.0% | |
| ATCTAGAGGAGTGGCTGTTG+AGG | - | chr8_4:12288320-12288339 | Msa1313980:intron | 50.0% | |
| TATGGGCCGCTATCAAGTCA+TGG | - | chr8_4:12288412-12288431 | Msa1313980:intron | 50.0% | |
| ATGGGCCGCTATCAAGTCAT+GGG | - | chr8_4:12288413-12288432 | Msa1313980:intron | 50.0% | |
| GAAGTTGTAGAGGTGGGTCA+TGG | - | chr8_4:12288513-12288532 | Msa1313980:intron | 50.0% | |
| AGGAGACACATGCCAGAGAA+AGG | - | chr8_4:12288696-12288715 | Msa1313980:intron | 50.0% | |
| GGAGACACATGCCAGAGAAA+GGG | - | chr8_4:12288697-12288716 | Msa1313980:intron | 50.0% | |
| TACTCAGCAGACCCTTTCTC+TGG | + | chr8_4:12288711-12288730 | None:intergenic | 50.0% | |
| !! | GAGGAAGGATTGACTTGCAG+AGG | - | chr8_4:12289035-12289054 | Msa1313980:intron | 50.0% |
| GACACTGCCGTGTCCTTCAT+CGG | - | chr8_4:12283389-12283408 | Msa1313980:three_prime_UTR | 55.0% | |
| AGAACGGCCGATGAAGGACA+CGG | + | chr8_4:12283399-12283418 | None:intergenic | 55.0% | |
| TCCTTCATCGGCCGTTCTGT+AGG | - | chr8_4:12283401-12283420 | Msa1313980:three_prime_UTR | 55.0% | |
| ACCTACAGAACGGCCGATGA+AGG | + | chr8_4:12283405-12283424 | None:intergenic | 55.0% | |
| ATTAGTGCTACCGCTGCGGA+TGG | - | chr8_4:12283434-12283453 | Msa1313980:CDS | 55.0% | |
| AAGGTCCGGGGTTCAAACTC+CGG | + | chr8_4:12284529-12284548 | None:intergenic | 55.0% | |
| GGTGTGAAAACACACAGCCC+TGG | - | chr8_4:12285184-12285203 | Msa1313980:intron | 55.0% | |
| TCCCACAACCGCGTCATCTA+TGG | + | chr8_4:12285248-12285267 | None:intergenic | 55.0% | |
| AGGAAGTGGAACGGGGAAAG+TGG | - | chr8_4:12285656-12285675 | Msa1313980:CDS | 55.0% | |
| GGAAGTGGAACGGGGAAAGT+GGG | - | chr8_4:12285657-12285676 | Msa1313980:CDS | 55.0% | |
| GCGCTAGATCCTCCAACTAC+TGG | + | chr8_4:12286200-12286219 | None:intergenic | 55.0% | |
| TACCAGTTCTCCCCCTTCGA+GGG | + | chr8_4:12286232-12286251 | None:intergenic | 55.0% | |
| CTTGCCTGCAAGCGAAGGTA+TGG | - | chr8_4:12287600-12287619 | Msa1313980:intron | 55.0% | |
| GCTTCCATACCTTCGCTTGC+AGG | + | chr8_4:12287607-12287626 | None:intergenic | 55.0% | |
| GGTCTAAACATCTGCGGTCG+AGG | - | chr8_4:12288157-12288176 | Msa1313980:intron | 55.0% | |
| GAGGATCCAGCTTCTCCACA+CGG | - | chr8_4:12288339-12288358 | Msa1313980:intron | 55.0% | |
| ATGAGAAGGCGAAGACCGTG+TGG | + | chr8_4:12288357-12288376 | None:intergenic | 55.0% | |
| CGGTCTTCGCCTTCTCATAG+AGG | - | chr8_4:12288359-12288378 | Msa1313980:intron | 55.0% | |
| ! | GGCGCTTTGAGCTGCAGTGA+GGG | + | chr8_4:12283312-12283331 | None:intergenic | 60.0% |
| ! | TGGCGCTTTGAGCTGCAGTG+AGG | + | chr8_4:12283313-12283332 | None:intergenic | 60.0% |
| ! | ACTGCAGCTCAAAGCGCCAC+TGG | - | chr8_4:12283314-12283333 | Msa1313980:three_prime_UTR | 60.0% |
| TCGGCCGTTCTGTAGGTCTC+AGG | - | chr8_4:12283408-12283427 | Msa1313980:three_prime_UTR | 60.0% | |
| GGATGTCTGGGTTCGAACCC+CGG | - | chr8_4:12283882-12283901 | Msa1313980:CDS | 60.0% | |
| CGCCTTGCCTTACCCTCGAA+GGG | - | chr8_4:12286217-12286236 | Msa1313980:intron | 60.0% | |
| GCCTTGCCTTACCCTCGAAG+GGG | - | chr8_4:12286218-12286237 | Msa1313980:intron | 60.0% | |
| CCTTGCCTTACCCTCGAAGG+GGG | - | chr8_4:12286219-12286238 | Msa1313980:intron | 60.0% | |
| GTTCTCCCCCTTCGAGGGTA+AGG | + | chr8_4:12286227-12286246 | None:intergenic | 60.0% | |
| TACCCTCGAAGGGGGAGAAC+TGG | - | chr8_4:12286227-12286246 | Msa1313980:intron | 60.0% | |
| CTACCAGTTCTCCCCCTTCG+AGG | + | chr8_4:12286233-12286252 | None:intergenic | 60.0% | |
| CTCGAAGGGGGAGAACTGGT+AGG | - | chr8_4:12286231-12286250 | Msa1313980:intron | 60.0% | |
| CGAAGACCGTGTGGAGAAGC+TGG | + | chr8_4:12288348-12288367 | None:intergenic | 60.0% | |
| GGTGGCCGGAGTTTGAACCC+CGG | - | chr8_4:12284521-12284540 | Msa1313980:CDS | 65.0% | |
| GCGCCTTGCCTTACCCTCGA+AGG | - | chr8_4:12286216-12286235 | Msa1313980:intron | 65.0% | |
| CCCCCTTCGAGGGTAAGGCA+AGG | + | chr8_4:12286222-12286241 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12283281 | 12289230 | 12283281 | ID=Msa1313980;Name=Msa1313980 |
| chr8_4 | mRNA | 12283281 | 12289230 | 12283281 | ID=Msa1313980-mRNA-1;Parent=Msa1313980;Name=Msa1313980-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.77|0.6|1|1|1|10|148|808 |
| chr8_4 | exon | 12283281 | 12284185 | 12283281 | ID=Msa1313980-mRNA-1:exon:4625;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12284461 | 12284724 | 12284461 | ID=Msa1313980-mRNA-1:exon:4624;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12284813 | 12285117 | 12284813 | ID=Msa1313980-mRNA-1:exon:4623;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12285236 | 12285343 | 12285236 | ID=Msa1313980-mRNA-1:exon:4622;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12285465 | 12285550 | 12285465 | ID=Msa1313980-mRNA-1:exon:4621;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12285644 | 12285704 | 12285644 | ID=Msa1313980-mRNA-1:exon:4620;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12285782 | 12285963 | 12285782 | ID=Msa1313980-mRNA-1:exon:4619;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12286242 | 12286482 | 12286242 | ID=Msa1313980-mRNA-1:exon:4618;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12286564 | 12286853 | 12286564 | ID=Msa1313980-mRNA-1:exon:4617;Parent=Msa1313980-mRNA-1 |
| chr8_4 | exon | 12289098 | 12289230 | 12289098 | ID=Msa1313980-mRNA-1:exon:4616;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12289098 | 12289230 | 12289098 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12286564 | 12286853 | 12286564 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12286242 | 12286482 | 12286242 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12285782 | 12285963 | 12285782 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12285644 | 12285704 | 12285644 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12285465 | 12285550 | 12285465 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12285236 | 12285343 | 12285236 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12284813 | 12285117 | 12284813 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12284461 | 12284724 | 12284461 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | CDS | 12283429 | 12284185 | 12283429 | ID=Msa1313980-mRNA-1:cds;Parent=Msa1313980-mRNA-1 |
| chr8_4 | three_prime_UTR | 12283281 | 12283428 | 12283281 | ID=Msa1313980-mRNA-1:three_prime_utr;Parent=Msa1313980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
