AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0733290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733290 MtrunA17_Chr7g0269651 60.165 846 268 8 157 970 178 986 0.0 1062
Msa0733290 MtrunA17_Chr3g0101871 48.696 920 435 6 246 1133 186 1100 0.0 913
Msa0733290 MtrunA17_Chr1g0206501 67.871 498 154 1 919 1410 1 498 0.0 736
Msa0733290 MtrunA17_Chr1g0173671 53.905 653 255 5 133 756 124 759 0.0 718
Msa0733290 MtrunA17_Chr1g0206491 70.492 427 101 1 246 647 150 576 0.0 644
Msa0733290 MtrunA17_Chr3g0101861 54.565 460 207 2 1166 1623 6 465 3.38e-173 529
Msa0733290 MtrunA17_Chr1g0173691 65.768 371 121 1 1259 1623 1 371 2.15e-169 515
Msa0733290 MtrunA17_Chr1g0173681 65.976 338 111 2 780 1114 2 338 6.37e-156 478
Msa0733290 MtrunA17_Chr7g0269671 67.470 332 101 2 1259 1583 1 332 8.89e-150 461
Msa0733290 MtrunA17_Chr7g0270391 48.403 407 205 1 676 1077 1 407 9.54e-130 410
Msa0733290 MtrunA17_Chr7g0248821 82.234 197 35 0 1427 1623 1 197 9.58e-109 343
Msa0733290 MtrunA17_Chr1g0206511 79.798 198 40 0 1426 1623 1 198 1.22e-108 343
Msa0733290 MtrunA17_Chr3g0133361 53.608 291 134 1 1334 1623 3 293 5.23e-98 317
Msa0733290 MtrunA17_Chr3g0093501 51.957 281 123 2 598 878 1 269 1.50e-92 300
Msa0733290 MtrunA17_Chr7g0269661 60.699 229 89 1 1008 1236 1 228 6.40e-86 280
Msa0733290 MtrunA17_Chr6g0472831 52.590 251 119 0 1331 1581 1 251 3.02e-84 276
Msa0733290 MtrunA17_Chr3g0100401 70.866 127 37 0 1426 1552 1 127 5.26e-56 190
Msa0733290 MtrunA17_Chr5g0400991 52.439 164 78 0 418 581 11 174 9.53e-54 186
Msa0733290 MtrunA17_Chr4g0022121 81.395 86 16 0 1073 1158 38 123 1.42e-38 140
Msa0733290 MtrunA17_Chr3g0139511 73.684 76 16 2 1550 1623 107 180 7.49e-29 114
Msa0733290 MtrunA17_Chr3g0129801 73.585 53 14 0 1526 1578 7 59 1.29e-19 84.7
Msa0733290 MtrunA17_Chr4g0021841 44.444 90 49 1 1095 1184 2 90 4.18e-18 80.9
Msa0733290 MtrunA17_Chr2g0307571 64.912 57 20 0 1506 1562 1 57 1.05e-17 78.6
Msa0733290 MtrunA17_Chr3g0096361 53.125 64 30 0 1110 1173 1 64 1.08e-13 68.2
Msa0733290 MtrunA17_Chr2g0308591 53.704 54 21 1 1245 1294 50 103 1.50e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733290 AT3G51690.1 41.727 278 155 3 1348 1623 59 331 3.96e-67 231
Msa0733290 AT3G51700.1 42.545 275 154 3 1348 1620 60 332 2.63e-63 220
Msa0733290 AT5G28780.1 41.313 259 150 1 1365 1623 74 330 3.11e-59 208

Find 339 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCCGGCTGGACGTCTTC+TGG 0.160918 5_1:+46538222 None:intergenic
AATTCACCATGTACGATAAA+TGG 0.162387 5_1:-46535237 Msa0733290:CDS
AGTTATGTTGCTGAGGAATT+TGG 0.193897 5_1:-46532762 Msa0733290:CDS
ATTGCCGGCGGGACGTCTTT+TGG 0.194712 5_1:+46537709 None:intergenic
TCTCCATTCATTGTAAATAC+TGG 0.199458 5_1:+46536806 None:intergenic
CGAGTCACTGCTTCCTTCTA+TGG 0.203683 5_1:-46534964 Msa0733290:CDS
TTGGAAGGAAGGGTGATTTC+AGG 0.210795 5_1:-46532677 Msa0733290:CDS
TGCGCGCAAAACTAATAATA+TGG 0.218155 5_1:-46533468 Msa0733290:CDS
CCATTAACCAGGCATCATTT+TGG 0.218196 5_1:-46534405 Msa0733290:CDS
CACTTTGTGCCACCAGGGTC+TGG 0.227921 5_1:-46534580 Msa0733290:CDS
AATTGCCCCAATGGACTTAA+TGG 0.230467 5_1:+46533496 None:intergenic
CATCAAATACGACTCCTTTA+AGG 0.233622 5_1:-46534479 Msa0733290:CDS
TGCGAAGCAAGCCTCCTTAA+AGG 0.236592 5_1:+46534465 None:intergenic
AACCCACCATAATCATTATT+AGG 0.251277 5_1:+46537425 None:intergenic
AAATATTTACGACACTATAA+TGG 0.262621 5_1:-46533749 Msa0733290:CDS
CCAAAATGATGCCTGGTTAA+TGG 0.267296 5_1:+46534405 None:intergenic
ATACTCATAACTGACGAAAA+TGG 0.287218 5_1:-46532416 Msa0733290:CDS
AACCCACCATAATCATTATC+AGG 0.291625 5_1:+46537914 None:intergenic
GCCCTTTACATAATTCAATA+AGG 0.294470 5_1:+46534537 None:intergenic
TCGAGTCTTGGCGGTTAAAA+TGG 0.294608 5_1:-46535933 Msa0733290:CDS
GGAGGAAAGGTTGTCGTTCT+AGG 0.295040 5_1:-46533361 Msa0733290:CDS
TTCATATTATGCAAAATAGA+TGG 0.296182 5_1:+46533028 None:intergenic
ATACGAAATGGAAAGATATT+TGG 0.298634 5_1:-46535577 Msa0733290:CDS
ACGCAGGAGAACAAAATTAT+TGG 0.298778 5_1:-46537269 Msa0733290:CDS
GATAATATGTGCTGAAATTC+CGG 0.300890 5_1:-46535337 Msa0733290:CDS
CGTGAACAATGAATGGTATA+TGG 0.303596 5_1:+46533542 None:intergenic
TACCTCGAATTAATTAATAT+TGG 0.303738 5_1:-46537202 Msa0733290:CDS
CGGAAATGGAATCTGGTAAA+AGG 0.305588 5_1:-46538287 None:intergenic
TTTATATCGACATCAGTTCT+TGG 0.309047 5_1:+46533877 None:intergenic
ATTAATTAATTCGAGGTAAT+CGG 0.310581 5_1:+46537207 None:intergenic
TGGAGACTGCTACATATAAT+TGG 0.311993 5_1:+46532465 None:intergenic
GATGCAAAAGATCTCACTTA+TGG 0.311993 5_1:-46534685 Msa0733290:CDS
ACCAAGTCTGGCCTGTCTGC+TGG 0.313174 5_1:+46535643 None:intergenic
TAACCACAAGATCACATTAA+AGG 0.316754 5_1:-46532795 Msa0733290:CDS
TTGTCCCTTCTTCTGTAAAC+AGG 0.318665 5_1:+46535150 None:intergenic
AGGCTGTTGATCGTAGTTTC+CGG 0.329905 5_1:-46533411 Msa0733290:CDS
TCACCGCGAGAGAATATTAA+TGG 0.330034 5_1:+46536138 None:intergenic
AATCAATACACTTACGATAA+TGG 0.330181 5_1:-46538195 Msa0733290:CDS
CTGCCGGCTGGACGTCTTCT+GGG 0.330556 5_1:+46538223 None:intergenic
AGCATCAATTGTGGGTTGTA+TGG 0.333752 5_1:+46535075 None:intergenic
ATGCAGGAGAGGAAAATTAT+TGG 0.333829 5_1:-46537755 Msa0733290:CDS
TGTTAGGACAATTTCTCCTT+TGG 0.346013 5_1:+46533627 None:intergenic
CAACATGATCACCTGAACTA+TGG 0.347054 5_1:+46533074 None:intergenic
GAGGTAGCAGCCTTGGTTGT+AGG 0.347798 5_1:-46536267 Msa0733290:CDS
ATGCAATGGCGATATGTTCT+TGG 0.348181 5_1:-46535753 Msa0733290:CDS
TCATCATCTTCAAATATAAT+AGG 0.348969 5_1:+46534790 None:intergenic
ACTTCCTCATGCTCATATTC+TGG 0.349651 5_1:-46535409 Msa0733290:CDS
TGGATGAACAATTCGAAAAT+CGG 0.350755 5_1:+46535374 None:intergenic
AGACGCATCTTGCGTGTTCC+AGG 0.353446 5_1:-46534259 Msa0733290:intron
TCGTTCTAGGTGGTGACTTT+CGG 0.356169 5_1:-46533348 Msa0733290:CDS
GAATTTGCAGAATGGGTATT+GGG 0.364183 5_1:-46533169 Msa0733290:CDS
AAAATTCTGCTCACCAAGTC+TGG 0.364829 5_1:+46535631 None:intergenic
GAACACGCAAGATGCGTCTT+TGG 0.365600 5_1:+46534263 None:intergenic
ACTTTGTGCCACCAGGGTCT+GGG 0.366311 5_1:-46534579 Msa0733290:CDS
TGAAACACTATCGGATGAAT+TGG 0.369901 5_1:-46538005 Msa0733290:CDS
TTAGGTTGATCCCCTGGTTT+AGG 0.370037 5_1:+46536755 None:intergenic
GGCTGTTGATCGTAGTTTCC+GGG 0.371427 5_1:-46533410 Msa0733290:CDS
GGCATTGGTGATGGTGTTGT+TGG 0.371800 5_1:-46533148 Msa0733290:CDS
TTGAACAAAATTAATGCATC+AGG 0.376267 5_1:-46532824 Msa0733290:CDS
CTCCATTCATTGTAAATACT+GGG 0.384444 5_1:+46536807 None:intergenic
GTGTATTGATTGGAAATTGC+CGG 0.384676 5_1:+46537694 None:intergenic
TAGGCAGCAAACTACCGATT+TGG 0.385555 5_1:+46536774 None:intergenic
GTGGGAGAACTGCTCATTCC+AGG 0.385556 5_1:-46533567 Msa0733290:CDS
AAATTCCTCAGCAACATAAC+TGG 0.386874 5_1:+46532764 None:intergenic
TAATGCACCAACTGCATTAG+AGG 0.392034 5_1:-46536286 Msa0733290:CDS
ACTGCTTCCTTCTATGGGTC+TGG 0.392785 5_1:-46534958 Msa0733290:CDS
CATTTACATGCAACCACAAA+TGG 0.394578 5_1:-46535705 Msa0733290:CDS
CCAGTAGTACTGTTGCTAAC+AGG 0.398275 5_1:-46532874 Msa0733290:CDS
ATAGCAGCACTTCTTATTCC+AGG 0.399317 5_1:-46533589 Msa0733290:CDS
AGAATTTGCAGAATGGGTAT+TGG 0.399417 5_1:-46533170 Msa0733290:CDS
ATTATCGTAAGTGTATTGAT+TGG 0.402274 5_1:+46537684 None:intergenic
CCTGTTAGCAACAGTACTAC+TGG 0.402436 5_1:+46532874 None:intergenic
GTGTTACCCGCAAGGTTTGT+CGG 0.402651 5_1:-46535808 Msa0733290:CDS
ATCCAAGTTCGGTGGGGAAA+AGG 0.403520 5_1:-46535834 Msa0733290:CDS
CACTTCCCATTTATCGTACA+TGG 0.403840 5_1:+46535231 None:intergenic
GCTTTCCATGTAAATTTCAA+TGG 0.404599 5_1:+46534655 None:intergenic
CGCAATATCAATTGCCCCAA+TGG 0.404619 5_1:+46533487 None:intergenic
TGATTTCAGGAAGCAACATT+GGG 0.404913 5_1:-46532664 Msa0733290:CDS
ACCTTATTGAATTATGTAAA+GGG 0.405361 5_1:-46534538 Msa0733290:CDS
ATTAAAAGAATTTGCAGAAT+GGG 0.406121 5_1:-46533176 Msa0733290:CDS
CAAAATATTCTGAATAATCA+AGG 0.408387 5_1:+46537122 None:intergenic
CAAGTATTGTTGACGAGTTA+AGG 0.409916 5_1:-46536435 Msa0733290:CDS
ATGCAAAAGATCTCACTTAT+GGG 0.415415 5_1:-46534684 Msa0733290:CDS
TTAATTCAAGAGATACGAAA+TGG 0.415854 5_1:-46535589 Msa0733290:CDS
TAAGGAGGCTTGCTTCGCAT+TGG 0.419559 5_1:-46534461 Msa0733290:CDS
GGAACCGCGGTATGTTTGTA+AGG 0.421224 5_1:-46537092 Msa0733290:CDS
AATATTTACGACACTATAAT+GGG 0.421394 5_1:-46533748 Msa0733290:CDS
AAGGAGGCTTGCTTCGCATT+GGG 0.421810 5_1:-46534460 Msa0733290:CDS
GCATAAATTCATCACGTCTC+TGG 0.425132 5_1:-46533273 Msa0733290:CDS
CACATGGTCCATGTATCATA+AGG 0.426368 5_1:+46535274 None:intergenic
CAAATATGTTCTTTCTTCAC+CGG 0.427236 5_1:+46532916 None:intergenic
ATTATCTTGTCAATGTTACT+TGG 0.427339 5_1:+46535354 None:intergenic
TTATATGAAGCACTGCTTAG+AGG 0.428982 5_1:-46535865 Msa0733290:CDS
AATGGCGTAACTGTTCAAAA+AGG 0.429300 5_1:-46535129 Msa0733290:CDS
GCACCGCCGACAAACCTTGC+GGG 0.430002 5_1:+46535802 None:intergenic
ATTATCGTAAGTGTATTGAT+TGG 0.431291 5_1:+46538197 None:intergenic
TAATTTCATCATAAGAAGTT+GGG 0.431524 5_1:+46534515 None:intergenic
AGATTGAACCCACTCATGAT+TGG 0.432625 5_1:-46537484 Msa0733290:CDS
AATTCCCATTGAAATTTACA+TGG 0.433874 5_1:-46534660 Msa0733290:CDS
ATTGAACCATTAAGTCCATT+GGG 0.434678 5_1:-46533502 Msa0733290:CDS
ACGATTAATCATTACAAGAA+TGG 0.437482 5_1:-46532711 Msa0733290:CDS
CTTTCCATGTAAATTTCAAT+GGG 0.438399 5_1:+46534656 None:intergenic
ATTGCGAAACAAACAGTAAT+GGG 0.439084 5_1:+46532563 None:intergenic
TGCATTAGAGGTAGCAGCCT+TGG 0.441566 5_1:-46536274 Msa0733290:CDS
TGAAGATGATGATGACTTTG+AGG 0.441602 5_1:-46534779 Msa0733290:CDS
TTAATTTCATCATAAGAAGT+TGG 0.441611 5_1:+46534514 None:intergenic
GAACTTTCGTGAACAATGAA+TGG 0.442010 5_1:+46533535 None:intergenic
TGGGACAACATATCTATTAT+CGG 0.444364 5_1:+46535095 None:intergenic
CATTGAACCATTAAGTCCAT+TGG 0.445894 5_1:-46533503 Msa0733290:CDS
CTATGGATAAGTAGGTCGTC+GGG 0.446055 5_1:+46533091 None:intergenic
GATGTCGATATAAATAGTGC+TGG 0.446275 5_1:-46533868 Msa0733290:CDS
CACCTTATTGAATTATGTAA+AGG 0.446904 5_1:-46534539 Msa0733290:CDS
GAAGATATGTATTGGAAGGA+AGG 0.449404 5_1:-46532688 Msa0733290:CDS
TGTTGATCGGAAATGGAATC+TGG 0.450286 5_1:-46538294 None:intergenic
AAGAATGGGAAGATATGTAT+TGG 0.451099 5_1:-46532696 Msa0733290:CDS
ATCGTTGTTGAGTGTGTATC+AGG 0.453534 5_1:-46536213 Msa0733290:CDS
TTTAATGTGATCTTGTGGTT+AGG 0.453614 5_1:+46532797 None:intergenic
ATATACAATTGTGCAAACTT+AGG 0.454014 5_1:+46536737 None:intergenic
ATGTTCGCCTTCACTTCAAT+TGG 0.455306 5_1:-46536869 Msa0733290:CDS
AATTATATGTAGCAGTCTCC+AGG 0.455772 5_1:-46532463 Msa0733290:CDS
GACCTACTTATCCATAGTTC+AGG 0.455814 5_1:-46533085 Msa0733290:CDS
TTGCTTCGCATTGGGTTTGT+TGG 0.456455 5_1:-46534452 Msa0733290:CDS
GTCTTGGTGACCATTTGTGT+TGG 0.457979 5_1:+46534629 None:intergenic
CTTTAAAATACAACTCATGC+AGG 0.459153 5_1:+46536942 None:intergenic
ATTCACCATGTACGATAAAT+GGG 0.462619 5_1:-46535236 Msa0733290:CDS
TCTGGTGTGTGAACATCATC+AGG 0.463504 5_1:+46532851 None:intergenic
CTGGTTCCTTTAGGAACCAC+TGG 0.464282 5_1:+46533316 None:intergenic
AAACCATCTCCGGCCATTTG+TGG 0.464374 5_1:+46535692 None:intergenic
AAACATTGTCTGTGCATCAT+TGG 0.464739 5_1:+46533436 None:intergenic
AGGATTCACTTTGTGCCACC+AGG 0.466688 5_1:-46534586 Msa0733290:CDS
GGATGAACAATTCGAAAATC+GGG 0.469349 5_1:+46535375 None:intergenic
AACCAATATTAATTAATTCG+AGG 0.470791 5_1:+46537200 None:intergenic
GTTACCCTGTTTACAGAAGA+AGG 0.471656 5_1:-46535155 Msa0733290:CDS
CGATTAATCATTACAAGAAT+GGG 0.471855 5_1:-46532710 Msa0733290:CDS
GTCGGAACCAGACCCATAGA+AGG 0.472382 5_1:+46534951 None:intergenic
ATATATGGGTACGGTGGTAC+AGG 0.473267 5_1:-46533691 Msa0733290:CDS
GCATCAATTGTGGGTTGTAT+GGG 0.475140 5_1:+46535076 None:intergenic
TGACTTCACAAATGAATTTG+CGG 0.476036 5_1:+46536399 None:intergenic
TGGAAATTTACCAACTGTAT+CGG 0.477602 5_1:+46537240 None:intergenic
TAAACTTCAGCATCAATTGT+GGG 0.479202 5_1:+46535067 None:intergenic
TCCAAGTTCGGTGGGGAAAA+GGG 0.483911 5_1:-46535833 Msa0733290:CDS
TCTTGGTGACCATTTGTGTT+GGG 0.485447 5_1:+46534630 None:intergenic
GCCAGCAGACAGGCCAGACT+TGG 0.488060 5_1:-46535644 Msa0733290:CDS
GTGATTTCAGGAAGCAACAT+TGG 0.490638 5_1:-46532665 Msa0733290:CDS
GATGTTCCTAATAATGATTA+TGG 0.491769 5_1:-46537431 Msa0733290:intron
CAATAAAGATTCATTGAAAG+AGG 0.493662 5_1:-46533812 Msa0733290:CDS
ATGCACATATTAATGTTGAA+TGG 0.494560 5_1:-46535044 Msa0733290:CDS
GCAAACTTAGGTTGATCCCC+TGG 0.495421 5_1:+46536749 None:intergenic
CTATGTGCTGCATGCAAGGA+AGG 0.495549 5_1:-46537000 Msa0733290:CDS
CAATGGACTTAATGGTTCAA+TGG 0.495590 5_1:+46533504 None:intergenic
GGAGAAAATTACCACCAAAT+CGG 0.496564 5_1:-46536788 Msa0733290:CDS
CTTTGTGCCACCAGGGTCTG+GGG 0.496643 5_1:-46534578 Msa0733290:CDS
AGGAATTTGGACATAAATGC+TGG 0.499791 5_1:-46532749 Msa0733290:CDS
TACCACTTGACGCCACTGTT+AGG 0.500493 5_1:+46533611 None:intergenic
GTCTCATCCCTTATGATACA+TGG 0.500691 5_1:-46535282 Msa0733290:CDS
CACAACAAATGTCGTATACA+AGG 0.501001 5_1:-46532378 Msa0733290:CDS
ATGCAGCACATAGAAAATTC+TGG 0.501198 5_1:+46537010 None:intergenic
GATGTTCCTGATAATGATTA+TGG 0.501681 5_1:-46537920 Msa0733290:intron
CTGTTAGCAACAGTACTACT+GGG 0.503897 5_1:+46532875 None:intergenic
GGAAAGCGTCCCAACACAAA+TGG 0.504550 5_1:-46534639 Msa0733290:CDS
TTTAAGTATGAAACCATCTC+CGG 0.508209 5_1:+46535682 None:intergenic
AGGAAGCAACATTGGGGACA+AGG 0.510135 5_1:-46532657 Msa0733290:CDS
ACCGTGCAAAAGTCTCATAT+TGG 0.511284 5_1:+46533222 None:intergenic
TACAACTCATGCAGGGATTG+AGG 0.512429 5_1:+46536950 None:intergenic
ACATGGTCCATGTATCATAA+GGG 0.512793 5_1:+46535275 None:intergenic
GCGCGCAAAACTAATAATAT+GGG 0.513364 5_1:-46533467 Msa0733290:CDS
CACAGAAGACATGGAGGTGA+TGG 0.515916 5_1:-46537809 Msa0733290:intron
TGGGTATTGGGCATTGGTGA+TGG 0.516885 5_1:-46533157 Msa0733290:CDS
GGTCAATCATTAAAACAAGT+TGG 0.518278 5_1:-46532521 Msa0733290:CDS
CAGCAGAGGGTCAATGATCA+AGG 0.518510 5_1:-46536015 Msa0733290:CDS
TGCAATGGCGATATGTTCTT+GGG 0.519447 5_1:-46535752 Msa0733290:CDS
GGTAGTTTGCTGCCTAAACC+AGG 0.519639 5_1:-46536767 Msa0733290:CDS
GGTAGTGTGGTCTAAAACAT+GGG 0.522832 5_1:-46534314 Msa0733290:CDS
ATTCTACCAGTGGTTCCTAA+AGG 0.523938 5_1:-46533322 Msa0733290:CDS
CACAGAAAACATGGAAGTGA+TGG 0.524313 5_1:-46537323 Msa0733290:intron
CAGTCTCCAGGGTGACATCA+AGG 0.525728 5_1:-46532451 Msa0733290:CDS
AATTAAAAGAATTTGCAGAA+TGG 0.527008 5_1:-46533177 Msa0733290:CDS
CGCAATTAAACCAATCATGA+GGG 0.527059 5_1:+46537963 None:intergenic
CATTGCGAAACAAACAGTAA+TGG 0.528541 5_1:+46532562 None:intergenic
TGCAAAGCGGACATTCCATT+CGG 0.531383 5_1:-46533382 Msa0733290:CDS
GCAGAATGGGTATTGGGCAT+TGG 0.532034 5_1:-46533163 Msa0733290:CDS
CGGTTCCCCAAAATGATGCC+TGG 0.532174 5_1:+46534398 None:intergenic
TGAGACAATATTGTAGAGCT+CGG 0.532339 5_1:+46535299 None:intergenic
ACTGATACACCTCTTTGTCT+TGG 0.533203 5_1:+46534613 None:intergenic
AGGCGAGGACAATCCAAGTT+CGG 0.536298 5_1:-46535845 Msa0733290:CDS
CATTGAAAGAGGAGCATGAT+CGG 0.537151 5_1:-46533801 Msa0733290:CDS
AACGGAATTCTAGTGTCTGA+AGG 0.539563 5_1:+46532608 None:intergenic
GAGACAATATTGTAGAGCTC+GGG 0.540168 5_1:+46535300 None:intergenic
GATTTAGCATGATCGAGTCT+TGG 0.541151 5_1:-46535945 Msa0733290:CDS
CAACCACAAATGGCCGGAGA+TGG 0.542312 5_1:-46535695 Msa0733290:CDS
ATGCAGGGATTGAGGTAGGC+TGG 0.542802 5_1:+46536958 None:intergenic
TTAAACTTCAGCATCAATTG+TGG 0.542931 5_1:+46535066 None:intergenic
TCATATTATGCAAAATAGAT+GGG 0.543781 5_1:+46533029 None:intergenic
CTACCTTTAATGTGATCTTG+TGG 0.544769 5_1:+46532792 None:intergenic
CACTATAATGGGCAGAGTTG+AGG 0.546164 5_1:-46533737 Msa0733290:CDS
GTTTATTGATGCCATTAACC+AGG 0.546453 5_1:-46534416 Msa0733290:CDS
TTTGCTTCCCACAGAAGACA+TGG 0.547190 5_1:-46537818 Msa0733290:intron
CTTTGCACCAATTGAAGTGA+AGG 0.549187 5_1:+46536862 None:intergenic
TTTGCTTCCCACAGAAAACA+TGG 0.549965 5_1:-46537332 Msa0733290:intron
TTGGTTGAATCCGATACAGT+TGG 0.550963 5_1:-46537250 Msa0733290:CDS
CTGATAACGAAACTCGCAAT+CGG 0.551261 5_1:-46536706 Msa0733290:CDS
AGGTAGTGTGGTCTAAAACA+TGG 0.552850 5_1:-46534315 Msa0733290:CDS
CAATACACTTACGATAATGA+AGG 0.553963 5_1:-46537679 Msa0733290:intron
GCAGCAAACTACCGATTTGG+TGG 0.554019 5_1:+46536777 None:intergenic
GGACATTCCATTCGGAGGAA+AGG 0.554721 5_1:-46533374 Msa0733290:CDS
GAGTCACTGCTTCCTTCTAT+GGG 0.554904 5_1:-46534963 Msa0733290:CDS
TGCCTACGTTGGAACTTGAA+CGG 0.557254 5_1:+46532590 None:intergenic
GAATGAGCAGTTCTCCCACC+TGG 0.558929 5_1:+46533571 None:intergenic
ATAAATGCTGGCTTGTGCAA+TGG 0.560740 5_1:-46532737 Msa0733290:CDS
ACGACGATAGAAATTCTTTG+AGG 0.561191 5_1:-46536459 Msa0733290:CDS
ATTGATTGGAAACTGCCGGC+TGG 0.562345 5_1:+46538211 None:intergenic
TTTAATTTCATCGCAAGAGT+CGG 0.562861 5_1:+46534933 None:intergenic
GTTGGAGACGCATGTGATGA+TGG 0.563137 5_1:-46533130 Msa0733290:CDS
CAGCAATAGCGAAACACTAT+CGG 0.563939 5_1:-46537525 Msa0733290:CDS
CACCTGAACTATGGATAAGT+AGG 0.564269 5_1:+46533083 None:intergenic
TGTTAGAGCTGATATGTACA+AGG 0.565157 5_1:-46535890 Msa0733290:CDS
TATGTTATGTCTTTGATACC+CGG 0.566036 5_1:-46532935 Msa0733290:CDS
AATGAATGGTATATGGAACC+TGG 0.566866 5_1:+46533549 None:intergenic
ACAATTTGAAGCCAGCAGAC+AGG 0.568822 5_1:-46535654 Msa0733290:CDS
TTCTTGGCATAGACGGATAG+TGG 0.569244 5_1:+46533893 None:intergenic
ATATTTGGCAAAGTCAAGGC+AGG 0.569463 5_1:-46535562 Msa0733290:intron
GAGGACAATCCAAGTTCGGT+GGG 0.570677 5_1:-46535841 Msa0733290:CDS
TAAAATTTCTCCCCAGACCC+TGG 0.570893 5_1:+46534568 None:intergenic
GAAGGTTGCAATGATAGTCT+AGG 0.571353 5_1:+46532626 None:intergenic
ACCTTTCCTTGATGTCACCC+TGG 0.571952 5_1:+46532445 None:intergenic
TTTGTTCAAGTACGTTAACA+AGG 0.574322 5_1:-46534995 Msa0733290:CDS
CAGCGATAGTGAAACACTAT+CGG 0.574530 5_1:-46538014 Msa0733290:CDS
ATGGCGATATGTTCTTGGGT+TGG 0.576437 5_1:-46535748 Msa0733290:CDS
AGGAAGCAGTGACTCGGTCG+TGG 0.576505 5_1:+46534971 None:intergenic
AGGCGCAAAACCAACGGCAA+TGG 0.578038 5_1:-46538267 Msa0733290:CDS
TAACGAAACTCGCAATCGGA+TGG 0.579233 5_1:-46536702 Msa0733290:CDS
ATGCCCAGAAGACGTCCAGC+CGG 0.579600 5_1:-46538226 Msa0733290:CDS
TGCATACAAATTGCAGCAGA+GGG 0.582141 5_1:-46536028 Msa0733290:CDS
AAATATGTTCTTTCTTCACC+GGG 0.583814 5_1:+46532917 None:intergenic
CAATTAAACCAATCATGAGT+GGG 0.584256 5_1:+46537476 None:intergenic
ACGACAACCTTTCCTCCGAA+TGG 0.585214 5_1:+46533367 None:intergenic
AGACAAAGAGGTGTATCAGT+TGG 0.586490 5_1:-46534610 Msa0733290:CDS
TCCATTCATTGTAAATACTG+GGG 0.587552 5_1:+46536808 None:intergenic
CGAGGACAATCCAAGTTCGG+TGG 0.587745 5_1:-46535842 Msa0733290:CDS
TCATCTGCATTGAGATCCAA+AGG 0.587923 5_1:-46533643 Msa0733290:CDS
TACATGCAACCACAAATGGC+CGG 0.588331 5_1:-46535701 Msa0733290:CDS
AATTCTGTGACCATTGCCGT+TGG 0.588718 5_1:+46538257 None:intergenic
CATAGAAGGAAGCAGTGACT+CGG 0.588980 5_1:+46534965 None:intergenic
TCAAAATTATCAAGATGCAA+TGG 0.589505 5_1:-46535767 Msa0733290:CDS
AAAGATATTTGGCAAAGTCA+AGG 0.589985 5_1:-46535566 Msa0733290:CDS
ATGGGAAGATATGTATTGGA+AGG 0.591972 5_1:-46532692 Msa0733290:CDS
AAGATATGTATTGGAAGGAA+GGG 0.592161 5_1:-46532687 Msa0733290:CDS
GTGTATTGATTGGAAACTGC+CGG 0.592439 5_1:+46538207 None:intergenic
ATGTCGATATAAATAGTGCT+GGG 0.593114 5_1:-46533867 Msa0733290:CDS
TTGCATACAAATTGCAGCAG+AGG 0.593499 5_1:-46536029 Msa0733290:CDS
CTTTCGGCAAATTCTACCAG+TGG 0.594018 5_1:-46533332 Msa0733290:CDS
ACTATGGATAAGTAGGTCGT+CGG 0.595124 5_1:+46533090 None:intergenic
GTCCTAACAGTGGCGTCAAG+TGG 0.595498 5_1:-46533613 Msa0733290:CDS
AAAATATTCTGAATAATCAA+GGG 0.595631 5_1:+46537123 None:intergenic
AAACTCAATCGTTCTACAGA+AGG 0.595669 5_1:+46534832 None:intergenic
AAAGGGTTGTGTTACCCGCA+AGG 0.597077 5_1:-46535816 Msa0733290:CDS
AAAGAGGTGTATCAGTTGGA+AGG 0.598040 5_1:-46534606 Msa0733290:CDS
CAATTCGAAAATCGGGATGG+AGG 0.598558 5_1:+46535382 None:intergenic
GAGTTCCAGTTATGTTGCTG+AGG 0.598828 5_1:-46532769 Msa0733290:CDS
GGTAAAAGGCGCAAAACCAA+CGG 0.598968 5_1:-46538273 Msa0733290:CDS
ATCATAATCACCTACAACCA+AGG 0.601136 5_1:+46536257 None:intergenic
TGCTTACAAATCAATTTGCG+CGG 0.602367 5_1:-46534342 Msa0733290:CDS
TTGCGCGGCCAGAGGTAGTG+TGG 0.603440 5_1:-46534327 Msa0733290:CDS
TTAGCATGATCGAGTCTTGG+CGG 0.603747 5_1:-46535942 Msa0733290:CDS
GCTGCTACCTCTAATGCAGT+TGG 0.604351 5_1:+46536279 None:intergenic
AAGACCAGAATATGAGCATG+AGG 0.607960 5_1:+46535405 None:intergenic
TGTCCGCTTTGCATACATCC+CGG 0.608231 5_1:+46533392 None:intergenic
AAAGGGACAAGATGCAGGAG+AGG 0.610331 5_1:-46537766 Msa0733290:CDS
TTTAAAATACAACTCATGCA+GGG 0.611416 5_1:+46536943 None:intergenic
TGTCCCTTCTTCTGTAAACA+GGG 0.612296 5_1:+46535151 None:intergenic
GTAACCGTCAGCATCAATAA+CGG 0.616356 5_1:+46535173 None:intergenic
ACTCATGCAGGGATTGAGGT+AGG 0.617800 5_1:+46536954 None:intergenic
CCATTCATTGTAAATACTGG+GGG 0.617964 5_1:+46536809 None:intergenic
ACATCAGTTCTTGGCATAGA+CGG 0.618006 5_1:+46533886 None:intergenic
ACTATCGGATGAATTGGATG+TGG 0.618647 5_1:-46537999 Msa0733290:CDS
TTACCCTGTTTACAGAAGAA+GGG 0.618785 5_1:-46535154 Msa0733290:CDS
GCAATTAAACCAATCATGAG+TGG 0.619372 5_1:+46537475 None:intergenic
GCGCAATTAAACCAATCATG+AGG 0.619434 5_1:+46537962 None:intergenic
CCGCAATCTGTGTTCTCTCA+CGG 0.621486 5_1:-46532488 Msa0733290:CDS
CAGCACTTCTTATTCCAGGT+GGG 0.621978 5_1:-46533585 Msa0733290:CDS
ATGACCATTAACAAAAGTCA+AGG 0.622895 5_1:-46532542 Msa0733290:CDS
AAATGGTCACCAAGACAAAG+AGG 0.624551 5_1:-46534622 Msa0733290:CDS
ATGCCCAAAAGACGTCCCGC+CGG 0.625298 5_1:-46537713 Msa0733290:CDS
TGCAAAAGATCTCACTTATG+GGG 0.626060 5_1:-46534683 Msa0733290:CDS
ATGATGCAGCGGATTTCGAG+AGG 0.627938 5_1:-46536239 Msa0733290:CDS
CAAATACGACTCCTTTAAGG+AGG 0.628320 5_1:-46534476 Msa0733290:CDS
GCAGCACTTCTTATTCCAGG+TGG 0.628547 5_1:-46533586 Msa0733290:CDS
AGCTACGCTTATTAGAAAAG+GGG 0.629718 5_1:-46536327 Msa0733290:intron
TAATGGGAAATTGCCTACGT+TGG 0.630003 5_1:+46532579 None:intergenic
AGGATTGCAACGCATTAATG+TGG 0.630790 5_1:-46537072 Msa0733290:CDS
TTGTTCAAGTACGTTAACAA+GGG 0.631888 5_1:-46534994 Msa0733290:CDS
AAATCAATTTGCGCGGCCAG+AGG 0.632559 5_1:-46534335 Msa0733290:CDS
TGCACCGCCGACAAACCTTG+CGG 0.632735 5_1:+46535801 None:intergenic
GATTGAGGTAGGCTGGCGAA+TGG 0.632746 5_1:+46536965 None:intergenic
TGAAGCACTGCTTAGAGGCG+AGG 0.633744 5_1:-46535860 Msa0733290:CDS
AACACCGTTATTGATGCTGA+CGG 0.634090 5_1:-46535177 Msa0733290:CDS
GGATTCACTTTGTGCCACCA+GGG 0.635455 5_1:-46534585 Msa0733290:CDS
TAATCTTCTCATAAAATCAG+CGG 0.637807 5_1:+46534378 None:intergenic
TCCAGGGTGACATCAAGGAA+AGG 0.638193 5_1:-46532446 Msa0733290:CDS
ATTGATTGGAAATTGCCGGC+GGG 0.638253 5_1:+46537698 None:intergenic
AATATTAATGGATATTGTAG+CGG 0.640507 5_1:+46536150 None:intergenic
GTAGTTTGCTGCCTAAACCA+GGG 0.642560 5_1:-46536766 Msa0733290:CDS
CACAAGATCACATTAAAGGT+AGG 0.644150 5_1:-46532791 Msa0733290:CDS
CCGTGAGAGAACACAGATTG+CGG 0.645526 5_1:+46532488 None:intergenic
GAGAGAACACAGATTGCGGT+AGG 0.649708 5_1:+46532492 None:intergenic
TAGTTTGCTGCCTAAACCAG+GGG 0.652223 5_1:-46536765 Msa0733290:CDS
GAACAATTCGAAAATCGGGA+TGG 0.652657 5_1:+46535379 None:intergenic
TATTGATTGGAAATTGCCGG+CGG 0.653541 5_1:+46537697 None:intergenic
ATTATATGTAGCAGTCTCCA+GGG 0.660772 5_1:-46532462 Msa0733290:CDS
ACTATCGGATGAATCAGATG+TGG 0.663239 5_1:-46537510 Msa0733290:CDS
CAATACACTTACGATAATGG+AGG 0.663877 5_1:-46538192 Msa0733290:intron
AGAAAAGGGGATACGATGGT+CGG 0.666308 5_1:-46536314 Msa0733290:CDS
GATTTCAGGAAGCAACATTG+GGG 0.671138 5_1:-46532663 Msa0733290:CDS
CAATTAAACCAATCATGAGG+GGG 0.671163 5_1:+46537965 None:intergenic
GTTAGAGCTGATATGTACAA+GGG 0.673299 5_1:-46535889 Msa0733290:CDS
GGAAAGGTTGTCGTTCTAGG+TGG 0.674868 5_1:-46533358 Msa0733290:CDS
AAAGCGGACATTCCATTCGG+AGG 0.677594 5_1:-46533379 Msa0733290:CDS
TGTAGGTGATTATGATGCAG+CGG 0.679936 5_1:-46536250 Msa0733290:CDS
TTGAACCATTAAGTCCATTG+GGG 0.680425 5_1:-46533501 Msa0733290:CDS
TATGGATAAGTAGGTCGTCG+GGG 0.681115 5_1:+46533092 None:intergenic
GTTTACAGAAGAAGGGACAA+TGG 0.682564 5_1:-46535147 Msa0733290:CDS
GCAACAGTACTACTGGGGCA+AGG 0.686780 5_1:+46532881 None:intergenic
TATTAGAAAAGGGGATACGA+TGG 0.688049 5_1:-46536318 Msa0733290:intron
AGGAGAAATTGTCCTAACAG+TGG 0.688353 5_1:-46533623 Msa0733290:CDS
TTCCGTTCAAGTTCCAACGT+AGG 0.693783 5_1:-46532592 Msa0733290:CDS
GCAATTAAACCAATCATGAG+GGG 0.698739 5_1:+46537964 None:intergenic
TTACCCGCAAGGTTTGTCGG+CGG 0.699640 5_1:-46535805 Msa0733290:CDS
CAATCCTTACAAACATACCG+CGG 0.701370 5_1:+46537088 None:intergenic
GAAAAGCTACTACAGTCCCA+CGG 0.702334 5_1:-46533931 Msa0733290:CDS
TATCCATTAATATTCTCTCG+CGG 0.706728 5_1:-46536141 Msa0733290:CDS
TGTCTGCATGTGAAGCTGTG+TGG 0.719865 5_1:-46534888 Msa0733290:CDS
AATTTCTCCCCAGACCCTGG+TGG 0.720594 5_1:+46534571 None:intergenic
GCTTCCCACAGAAGACATGG+AGG 0.734970 5_1:-46537815 Msa0733290:intron
TTTCCGGGATGTATGCAAAG+CGG 0.741518 5_1:-46533395 Msa0733290:CDS
CTTATGATACATGGACCATG+TGG 0.749107 5_1:-46535273 Msa0733290:CDS
AGGACAATCCAAGTTCGGTG+GGG 0.749466 5_1:-46535840 Msa0733290:CDS
AACAAATGTCGTATACAAGG+AGG 0.752374 5_1:-46532375 Msa0733290:CDS
GCAATCGGATGGCATCCGTG+AGG 0.766965 5_1:-46536691 Msa0733290:intron
TGTTAGCAACAGTACTACTG+GGG 0.769318 5_1:+46532876 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTTTTTATGTTAATA+TGG - chr5_1:46532796-46532815 Msa0733290:CDS 10.0%
!! ACAATTTAAATATCATAATA+TGG - chr5_1:46534028-46534047 Msa0733290:intron 10.0%
!! AATAAAAACAATAATTAGTA+CGG + chr5_1:46534147-46534166 None:intergenic 10.0%
!!! ACTAATTATTGTTTTTATTT+TGG - chr5_1:46534148-46534167 Msa0733290:intron 10.0%
!!! AAAGGTTTATTTTTTATATA+TGG - chr5_1:46536934-46536953 Msa0733290:CDS 10.0%
!!! AAGGTTTATTTTTTATATAT+GGG - chr5_1:46536935-46536954 Msa0733290:CDS 10.0%
!!! CTTGTAAATTTTTTCATTAT+AGG + chr5_1:46532511-46532530 None:intergenic 15.0%
!!! AGACAATAATTTTTAAAAAC+AGG + chr5_1:46532545-46532564 None:intergenic 15.0%
!! TTCACAAAATTTAACAAAAT+AGG + chr5_1:46533058-46533077 None:intergenic 15.0%
!!! TTCTCATTTTAATGTTAATA+TGG - chr5_1:46533282-46533301 Msa0733290:CDS 15.0%
!!! TTGGTTTTTTTAAAATTGAT+TGG - chr5_1:46533457-46533476 Msa0733290:CDS 15.0%
!! AAAATATTCTGAATAATCAA+GGG + chr5_1:46533520-46533539 None:intergenic 15.0%
!!! TTATTTTTTATATATGGGTA+CGG - chr5_1:46536940-46536959 Msa0733290:CDS 15.0%
!!! TTAATTTTGTTCAAAAATTC+TGG + chr5_1:46537810-46537829 None:intergenic 15.0%
!!! TTTTAAAAACAGGACATTAA+AGG + chr5_1:46532535-46532554 None:intergenic 20.0%
!! TCACAAAATTTAACAATACA+GGG + chr5_1:46532568-46532587 None:intergenic 20.0%
!! TTCACAAAATTTAACAATAC+AGG + chr5_1:46532569-46532588 None:intergenic 20.0%
!!! ATTTCTCATTTTTATCCTTT+AGG - chr5_1:46532588-46532607 Msa0733290:CDS 20.0%
!!! CTTGGAATTTTTTTCATTAT+AGG + chr5_1:46533024-46533043 None:intergenic 20.0%
!! TTAACAAAATAGGACATTAA+AGG + chr5_1:46533048-46533067 None:intergenic 20.0%
!!! ATTTCTCATTTTTATCCTTT+AGG - chr5_1:46532588-46532607 Msa0733290:CDS 20.0%
!! ATTAATTAATTCGAGGTAAT+CGG + chr5_1:46533436-46533455 None:intergenic 20.0%
!! TACCTCGAATTAATTAATAT+TGG - chr5_1:46533438-46533457 Msa0733290:CDS 20.0%
!! AACCAATATTAATTAATTCG+AGG + chr5_1:46533443-46533462 None:intergenic 20.0%
!! CAAAATATTCTGAATAATCA+AGG + chr5_1:46533521-46533540 None:intergenic 20.0%
!!! TATTCAGAATATTTTGATGT+TGG - chr5_1:46533525-46533544 Msa0733290:CDS 20.0%
!!! ATTCAGAATATTTTGATGTT+GGG - chr5_1:46533526-46533545 Msa0733290:CDS 20.0%
!!! TAGAAAGAGCAAATATTTTT+TGG - chr5_1:46533725-46533744 Msa0733290:CDS 20.0%
!! TAACATACTTACGTAATTAT+TGG - chr5_1:46534000-46534019 Msa0733290:intron 20.0%
!!! AATATTAATGGATATTGTAG+CGG + chr5_1:46534493-46534512 None:intergenic 20.0%
!!! GATACAAAAATTCTTTTGAT+GGG + chr5_1:46534577-46534596 None:intergenic 20.0%
!!! TGATACAAAAATTCTTTTGA+TGG + chr5_1:46534578-46534597 None:intergenic 20.0%
!! GTAAATGTAATAAAAAGATC+AGG + chr5_1:46534922-46534941 None:intergenic 20.0%
!!! AAAACAGTAAAAGCAAATTT+TGG + chr5_1:46535131-46535150 None:intergenic 20.0%
!! GCATGATATTAAAATAACAA+TGG + chr5_1:46535178-46535197 None:intergenic 20.0%
!! TCATCATCTTCAAATATAAT+AGG + chr5_1:46535853-46535872 None:intergenic 20.0%
!! ACCTTATTGAATTATGTAAA+GGG - chr5_1:46536102-46536121 Msa0733290:CDS 20.0%
!! TAATTTCATCATAAGAAGTT+GGG + chr5_1:46536128-46536147 None:intergenic 20.0%
!! TTAATTTCATCATAAGAAGT+TGG + chr5_1:46536129-46536148 None:intergenic 20.0%
!! AAATATTTACGACACTATAA+TGG - chr5_1:46536891-46536910 Msa0733290:CDS 20.0%
!! AATATTTACGACACTATAAT+GGG - chr5_1:46536892-46536911 Msa0733290:CDS 20.0%
!! AATTAAAAGAATTTGCAGAA+TGG - chr5_1:46537463-46537482 Msa0733290:CDS 20.0%
!! ATTAAAAGAATTTGCAGAAT+GGG - chr5_1:46537464-46537483 Msa0733290:CDS 20.0%
!! TCATATTATGCAAAATAGAT+GGG + chr5_1:46537614-46537633 None:intergenic 20.0%
!! TTCATATTATGCAAAATAGA+TGG + chr5_1:46537615-46537634 None:intergenic 20.0%
!! ATTATCGTAAGTGTATTGAT+TGG + chr5_1:46532446-46532465 None:intergenic 25.0%
! AATCAATACACTTACGATAA+TGG - chr5_1:46532445-46532464 Msa0733290:CDS 25.0%
!! ATTATCGTAAGTGTATTGAT+TGG + chr5_1:46532446-46532465 None:intergenic 25.0%
! GATGTTCCTAATAATGATTA+TGG - chr5_1:46533209-46533228 Msa0733290:CDS 25.0%
! TTCCTAATAATGATTATGGT+GGG - chr5_1:46533213-46533232 Msa0733290:CDS 25.0%
!!! TTCAGAATATTTTGATGTTG+GGG - chr5_1:46533527-46533546 Msa0733290:CDS 25.0%
!! TTTAAAATACAACTCATGCA+GGG + chr5_1:46533700-46533719 None:intergenic 25.0%
! ATATACAATTGTGCAAACTT+AGG + chr5_1:46533906-46533925 None:intergenic 25.0%
! GAAATAAGAAAATTACCTCA+CGG + chr5_1:46533967-46533986 None:intergenic 25.0%
! TAAGTATGTTAAGCAAAAGA+TGG + chr5_1:46533991-46534010 None:intergenic 25.0%
!!! GTTTTTATTTTGGTGTAGAA+TGG - chr5_1:46534158-46534177 Msa0733290:intron 25.0%
! ATTCATTTGTGAAGTCATAT+AGG - chr5_1:46534247-46534266 Msa0733290:intron 25.0%
! TAAGTATGATGTCTCAAAAA+CGG + chr5_1:46534470-46534489 None:intergenic 25.0%
!! TTTTTGTATCAATGAAAGAG+TGG - chr5_1:46534587-46534606 Msa0733290:CDS 25.0%
! TCAAAATTATCAAGATGCAA+TGG - chr5_1:46534873-46534892 Msa0733290:CDS 25.0%
! TTAATTCAAGAGATACGAAA+TGG - chr5_1:46535051-46535070 Msa0733290:CDS 25.0%
! ATACGAAATGGAAAGATATT+TGG - chr5_1:46535063-46535082 Msa0733290:CDS 25.0%
! ACAATTGAATTTCAAAAACG+AGG - chr5_1:46535208-46535227 Msa0733290:CDS 25.0%
! ATTATCTTGTCAATGTTACT+TGG + chr5_1:46535289-46535308 None:intergenic 25.0%
!! TTAATATTTTCATCACCACA+TGG + chr5_1:46535385-46535404 None:intergenic 25.0%
! ATGCACATATTAATGTTGAA+TGG - chr5_1:46535596-46535615 Msa0733290:CDS 25.0%
!! GATTGAGTTTTCATTTAGAA+GGG - chr5_1:46535821-46535840 Msa0733290:CDS 25.0%
!! ATTGAGTTTTCATTTAGAAG+GGG - chr5_1:46535822-46535841 Msa0733290:CDS 25.0%
!! TATTCGTGACACAAAATTTT+TGG - chr5_1:46535903-46535922 Msa0733290:CDS 25.0%
! AATTCCCATTGAAATTTACA+TGG - chr5_1:46535980-46535999 Msa0733290:CDS 25.0%
! CTTTCCATGTAAATTTCAAT+GGG + chr5_1:46535987-46536006 None:intergenic 25.0%
! CACCTTATTGAATTATGTAA+AGG - chr5_1:46536101-46536120 Msa0733290:CDS 25.0%
! TAATCTTCTCATAAAATCAG+CGG + chr5_1:46536265-46536284 None:intergenic 25.0%
! CTTATATCATGGTATATTAG+TGG + chr5_1:46536447-46536466 None:intergenic 25.0%
! ACCATGATATAAGAATAGTA+TGG - chr5_1:46536454-46536473 Msa0733290:CDS 25.0%
! ACCATACTATTCTTATATCA+TGG + chr5_1:46536458-46536477 None:intergenic 25.0%
! CAATGGAAATGATAATTGTT+TGG + chr5_1:46536570-46536589 None:intergenic 25.0%
! CAATAAAGATTCATTGAAAG+AGG - chr5_1:46536828-46536847 Msa0733290:CDS 25.0%
!! GTACAGGAAAAACTTTTATT+TGG - chr5_1:46536965-46536984 Msa0733290:CDS 25.0%
!!! GCTCTATTTTTAAAATACTC+TGG + chr5_1:46537642-46537661 None:intergenic 25.0%
! TTGAACAAAATTAATGCATC+AGG - chr5_1:46537816-46537835 Msa0733290:intron 25.0%
! ACGATTAATCATTACAAGAA+TGG - chr5_1:46537929-46537948 Msa0733290:CDS 25.0%
! CGATTAATCATTACAAGAAT+GGG - chr5_1:46537930-46537949 Msa0733290:CDS 25.0%
! GATGTTCCTGATAATGATTA+TGG - chr5_1:46532720-46532739 Msa0733290:CDS 30.0%
! TTCCTGATAATGATTATGGT+GGG - chr5_1:46532724-46532743 Msa0733290:CDS 30.0%
AACAGCATGCAATCTAAAAA+AGG - chr5_1:46532856-46532875 Msa0733290:CDS 30.0%
ACAGCATGCAATCTAAAAAA+GGG - chr5_1:46532857-46532876 Msa0733290:CDS 30.0%
! TTTTGGGCATATGTATGTAT+CGG + chr5_1:46532917-46532936 None:intergenic 30.0%
CAATACACTTACGATAATGA+AGG - chr5_1:46532961-46532980 Msa0733290:CDS 30.0%
AAATAGGACATTAAAGGTCT+TGG + chr5_1:46533042-46533061 None:intergenic 30.0%
CAATTAAACCAATCATGAGT+GGG + chr5_1:46533167-46533186 None:intergenic 30.0%
GTTCCTAATAATGATTATGG+TGG - chr5_1:46533212-46533231 Msa0733290:CDS 30.0%
AACCCACCATAATCATTATT+AGG + chr5_1:46533218-46533237 None:intergenic 30.0%
ACAGCATGCAATCTAAAAAA+AGG - chr5_1:46532857-46532876 Msa0733290:CDS 30.0%
TGGAAATTTACCAACTGTAT+CGG + chr5_1:46533403-46533422 None:intergenic 30.0%
!! CTTTAAAATACAACTCATGC+AGG + chr5_1:46533701-46533720 None:intergenic 30.0%
ATCGATAAGACCAAAAACAA+TGG - chr5_1:46533801-46533820 Msa0733290:CDS 30.0%
TCCATTCATTGTAAATACTG+GGG + chr5_1:46533835-46533854 None:intergenic 30.0%
CTCCATTCATTGTAAATACT+GGG + chr5_1:46533836-46533855 None:intergenic 30.0%
TCTCCATTCATTGTAAATAC+TGG + chr5_1:46533837-46533856 None:intergenic 30.0%
TGACTTCACAAATGAATTTG+CGG + chr5_1:46534244-46534263 None:intergenic 30.0%
ATTTGTGAAGTCATATAGGT+TGG - chr5_1:46534251-46534270 Msa0733290:intron 30.0%
AAAGCTACGCTTATTAGAAA+AGG - chr5_1:46534311-46534330 Msa0733290:CDS 30.0%
AAGCTACGCTTATTAGAAAA+GGG - chr5_1:46534312-46534331 Msa0733290:CDS 30.0%
TATCCATTAATATTCTCTCG+CGG - chr5_1:46534499-46534518 Msa0733290:CDS 30.0%
! TTACAACAATTTTGTTGCGA+TGG - chr5_1:46534673-46534692 Msa0733290:CDS 30.0%
!! TAACATCTTTTTGGTGATCA+CGG + chr5_1:46534735-46534754 None:intergenic 30.0%
!! TATCAGCTCTAACATCTTTT+TGG + chr5_1:46534744-46534763 None:intergenic 30.0%
TTTAAGTATGAAACCATCTC+CGG + chr5_1:46534961-46534980 None:intergenic 30.0%
AAAGATATTTGGCAAAGTCA+AGG - chr5_1:46535074-46535093 Msa0733290:CDS 30.0%
! GTTTTCTGTATGTCATTACT+AGG - chr5_1:46535146-46535165 Msa0733290:CDS 30.0%
TGGATGAACAATTCGAAAAT+CGG + chr5_1:46535269-46535288 None:intergenic 30.0%
GATAATATGTGCTGAAATTC+CGG - chr5_1:46535303-46535322 Msa0733290:CDS 30.0%
AATTCACCATGTACGATAAA+TGG - chr5_1:46535403-46535422 Msa0733290:CDS 30.0%
ATTCACCATGTACGATAAAT+GGG - chr5_1:46535404-46535423 Msa0733290:CDS 30.0%
TGGGACAACATATCTATTAT+CGG + chr5_1:46535548-46535567 None:intergenic 30.0%
TAAACTTCAGCATCAATTGT+GGG + chr5_1:46535576-46535595 None:intergenic 30.0%
TTAAACTTCAGCATCAATTG+TGG + chr5_1:46535577-46535596 None:intergenic 30.0%
TTTGTTCAAGTACGTTAACA+AGG - chr5_1:46535645-46535664 Msa0733290:CDS 30.0%
TTGTTCAAGTACGTTAACAA+GGG - chr5_1:46535646-46535665 Msa0733290:CDS 30.0%
! TTTAATTTCATCGCAAGAGT+CGG + chr5_1:46535710-46535729 None:intergenic 30.0%
! CGATTGAGTTTTCATTTAGA+AGG - chr5_1:46535820-46535839 Msa0733290:CDS 30.0%
! AATTTTGTGTCACGAATATG+TGG + chr5_1:46535901-46535920 None:intergenic 30.0%
! ATAAGTGAGATCTTTTGCAT+CGG + chr5_1:46535956-46535975 None:intergenic 30.0%
ATGCAAAAGATCTCACTTAT+GGG - chr5_1:46535956-46535975 Msa0733290:CDS 30.0%
GCTTTCCATGTAAATTTCAA+TGG + chr5_1:46535988-46536007 None:intergenic 30.0%
GCCCTTTACATAATTCAATA+AGG + chr5_1:46536106-46536125 None:intergenic 30.0%
GATAAGGAAAAACATATACC+TGG + chr5_1:46536402-46536421 None:intergenic 30.0%
! TAAGCAAGAAGCATAAGATA+AGG + chr5_1:46536418-46536437 None:intergenic 30.0%
! TAGCTTTTCAATTTCTGCAA+GGG + chr5_1:46536698-46536717 None:intergenic 30.0%
TTTATATCGACATCAGTTCT+TGG + chr5_1:46536766-46536785 None:intergenic 30.0%
ATGTCGATATAAATAGTGCT+GGG - chr5_1:46536773-46536792 Msa0733290:CDS 30.0%
AGAGTTGAGGCAAATAAAAA+AGG - chr5_1:46536916-46536935 Msa0733290:CDS 30.0%
!!! TTTTTTATATATGGGTACGG+TGG - chr5_1:46536943-46536962 Msa0733290:CDS 30.0%
ATTGAACCATTAAGTCCATT+GGG - chr5_1:46537138-46537157 Msa0733290:CDS 30.0%
!!! TCTTCGACAATCAGATTTTT+TGG + chr5_1:46537675-46537694 None:intergenic 30.0%
TATGTTATGTCTTTGATACC+CGG - chr5_1:46537705-46537724 Msa0733290:CDS 30.0%
AAATATGTTCTTTCTTCACC+GGG + chr5_1:46537726-46537745 None:intergenic 30.0%
CAAATATGTTCTTTCTTCAC+CGG + chr5_1:46537727-46537746 None:intergenic 30.0%
TTTAATGTGATCTTGTGGTT+AGG + chr5_1:46537846-46537865 None:intergenic 30.0%
TAACCACAAGATCACATTAA+AGG - chr5_1:46537845-46537864 Msa0733290:intron 30.0%
AAGAATGGGAAGATATGTAT+TGG - chr5_1:46537944-46537963 Msa0733290:CDS 30.0%
AAGATATGTATTGGAAGGAA+GGG - chr5_1:46537953-46537972 Msa0733290:CDS 30.0%
ATTGCGAAACAAACAGTAAT+GGG + chr5_1:46538080-46538099 None:intergenic 30.0%
ATGACCATTAACAAAAGTCA+AGG - chr5_1:46538098-46538117 Msa0733290:intron 30.0%
! TTGACCTTGACTTTTGTTAA+TGG + chr5_1:46538105-46538124 None:intergenic 30.0%
GGTCAATCATTAAAACAAGT+TGG - chr5_1:46538119-46538138 Msa0733290:intron 30.0%
ATACTCATAACTGACGAAAA+TGG - chr5_1:46538224-46538243 Msa0733290:CDS 30.0%
! CAATACACTTACGATAATGG+AGG - chr5_1:46532448-46532467 Msa0733290:CDS 35.0%
ATATCAACGTCATCTCCTAA+AGG + chr5_1:46532606-46532625 None:intergenic 35.0%
TGAAACACTATCGGATGAAT+TGG - chr5_1:46532635-46532654 Msa0733290:CDS 35.0%
CAATTAAACCAATCATGAGG+GGG + chr5_1:46532678-46532697 None:intergenic 35.0%
GCAATTAAACCAATCATGAG+GGG + chr5_1:46532679-46532698 None:intergenic 35.0%
CGCAATTAAACCAATCATGA+GGG + chr5_1:46532680-46532699 None:intergenic 35.0%
! GTTCCTGATAATGATTATGG+TGG - chr5_1:46532723-46532742 Msa0733290:CDS 35.0%
AACCCACCATAATCATTATC+AGG + chr5_1:46532729-46532748 None:intergenic 35.0%
ATGCAGGAGAGGAAAATTAT+TGG - chr5_1:46532885-46532904 Msa0733290:CDS 35.0%
!! GTGTATTGATTGGAAATTGC+CGG + chr5_1:46532949-46532968 None:intergenic 35.0%
ATATCAACGTCATCTCCTAA+AGG + chr5_1:46532606-46532625 None:intergenic 35.0%
GCAATTAAACCAATCATGAG+TGG + chr5_1:46532679-46532698 None:intergenic 35.0%
! ATCACTTCCATGTTTTCTGT+GGG + chr5_1:46533318-46533337 None:intergenic 35.0%
CTAAAAAAAGGATAAGACGC+AGG - chr5_1:46533355-46533374 Msa0733290:CDS 35.0%
ACGCAGGAGAACAAAATTAT+TGG - chr5_1:46533371-46533390 Msa0733290:CDS 35.0%
ATGCAGCACATAGAAAATTC+TGG + chr5_1:46533633-46533652 None:intergenic 35.0%
TAAGACCAAAAACAATGGCA+AGG - chr5_1:46533806-46533825 Msa0733290:CDS 35.0%
CCATTCATTGTAAATACTGG+GGG + chr5_1:46533834-46533853 None:intergenic 35.0%
GGAGAAAATTACCACCAAAT+CGG - chr5_1:46533852-46533871 Msa0733290:CDS 35.0%
TGGTTCTCATTGCAATATGT+TGG - chr5_1:46534048-46534067 Msa0733290:intron 35.0%
ACGACGATAGAAATTCTTTG+AGG - chr5_1:46534181-46534200 Msa0733290:intron 35.0%
! CAAGTATTGTTGACGAGTTA+AGG - chr5_1:46534205-46534224 Msa0733290:intron 35.0%
! AATAAGCGTAGCTTTACAGT+TGG + chr5_1:46534306-46534325 None:intergenic 35.0%
AGCTACGCTTATTAGAAAAG+GGG - chr5_1:46534313-46534332 Msa0733290:CDS 35.0%
TATTAGAAAAGGGGATACGA+TGG - chr5_1:46534322-46534341 Msa0733290:CDS 35.0%
ATCATAATCACCTACAACCA+AGG + chr5_1:46534386-46534405 None:intergenic 35.0%
! TCGACGAGATATTCGATTTT+CGG - chr5_1:46534534-46534553 Msa0733290:CDS 35.0%
TGTTAGAGCTGATATGTACA+AGG - chr5_1:46534750-46534769 Msa0733290:CDS 35.0%
GTTAGAGCTGATATGTACAA+GGG - chr5_1:46534751-46534770 Msa0733290:CDS 35.0%
!! TTATATGAAGCACTGCTTAG+AGG - chr5_1:46534775-46534794 Msa0733290:CDS 35.0%
CATTTACATGCAACCACAAA+TGG - chr5_1:46534935-46534954 Msa0733290:CDS 35.0%
GGATGAACAATTCGAAAATC+GGG + chr5_1:46535268-46535287 None:intergenic 35.0%
!!! TCGGGATTTTTTTCTTTGTC+CGG + chr5_1:46535325-46535344 None:intergenic 35.0%
TGAGACAATATTGTAGAGCT+CGG + chr5_1:46535344-46535363 None:intergenic 35.0%
ACATGGTCCATGTATCATAA+GGG + chr5_1:46535368-46535387 None:intergenic 35.0%
! GTGTTGTCGACATATCTTTT+CGG + chr5_1:46535448-46535467 None:intergenic 35.0%
TTACCCTGTTTACAGAAGAA+GGG - chr5_1:46535486-46535505 Msa0733290:intron 35.0%
AATGGCGTAACTGTTCAAAA+AGG - chr5_1:46535511-46535530 Msa0733290:intron 35.0%
AAACTCAATCGTTCTACAGA+AGG + chr5_1:46535811-46535830 None:intergenic 35.0%
! TGAAGATGATGATGACTTTG+AGG - chr5_1:46535861-46535880 Msa0733290:CDS 35.0%
!!! GTGACACAAAATTTTTGGCA+TGG - chr5_1:46535908-46535927 Msa0733290:CDS 35.0%
!!! CACAAAATTTTTGGCATGGA+TGG - chr5_1:46535912-46535931 Msa0733290:CDS 35.0%
!!! AAAATTTTTGGCATGGATGG+AGG - chr5_1:46535915-46535934 Msa0733290:CDS 35.0%
GATGCAAAAGATCTCACTTA+TGG - chr5_1:46535955-46535974 Msa0733290:CDS 35.0%
TGCAAAAGATCTCACTTATG+GGG - chr5_1:46535957-46535976 Msa0733290:CDS 35.0%
CATCAAATACGACTCCTTTA+AGG - chr5_1:46536161-46536180 Msa0733290:CDS 35.0%
GTTTATTGATGCCATTAACC+AGG - chr5_1:46536224-46536243 Msa0733290:CDS 35.0%
! CATTAACCAGGCATCATTTT+GGG - chr5_1:46536236-46536255 Msa0733290:CDS 35.0%
! ATTAACCAGGCATCATTTTG+GGG - chr5_1:46536237-46536256 Msa0733290:CDS 35.0%
TGCTTACAAATCAATTTGCG+CGG - chr5_1:46536298-46536317 Msa0733290:CDS 35.0%
GTATGGTTTATAGCACATCA+CGG - chr5_1:46536471-46536490 Msa0733290:intron 35.0%
CATCATATATGTCCATACTG+TGG + chr5_1:46536504-46536523 None:intergenic 35.0%
TATCATTTCCATTGTATGCG+AGG - chr5_1:46536576-46536595 Msa0733290:intron 35.0%
GCATGGAAAAACAAAGAGTT+TGG + chr5_1:46536637-46536656 None:intergenic 35.0%
! GTAGCTTTTCAATTTCTGCA+AGG + chr5_1:46536699-46536718 None:intergenic 35.0%
!!! GTCCTTGAAATTTTTTCCGT+GGG + chr5_1:46536728-46536747 None:intergenic 35.0%
GATGTCGATATAAATAGTGC+TGG - chr5_1:46536772-46536791 Msa0733290:CDS 35.0%
TGTTAGGACAATTTCTCCTT+TGG + chr5_1:46537016-46537035 None:intergenic 35.0%
AATGAATGGTATATGGAACC+TGG + chr5_1:46537094-46537113 None:intergenic 35.0%
CGTGAACAATGAATGGTATA+TGG + chr5_1:46537101-46537120 None:intergenic 35.0%
GAACTTTCGTGAACAATGAA+TGG + chr5_1:46537108-46537127 None:intergenic 35.0%
! CAATGGACTTAATGGTTCAA+TGG + chr5_1:46537139-46537158 None:intergenic 35.0%
CATTGAACCATTAAGTCCAT+TGG - chr5_1:46537137-46537156 Msa0733290:CDS 35.0%
TTGAACCATTAAGTCCATTG+GGG - chr5_1:46537139-46537158 Msa0733290:CDS 35.0%
TGCGCGCAAAACTAATAATA+TGG - chr5_1:46537172-46537191 Msa0733290:CDS 35.0%
GCGCGCAAAACTAATAATAT+GGG - chr5_1:46537173-46537192 Msa0733290:CDS 35.0%
AAACATTGTCTGTGCATCAT+TGG + chr5_1:46537207-46537226 None:intergenic 35.0%
!!! ATGTCTTTTCTGGTTCCTTT+AGG + chr5_1:46537336-46537355 None:intergenic 35.0%
! ACCAATATGAGACTTTTGCA+CGG - chr5_1:46537417-46537436 Msa0733290:intron 35.0%
AGAATTTGCAGAATGGGTAT+TGG - chr5_1:46537470-46537489 Msa0733290:CDS 35.0%
GAATTTGCAGAATGGGTATT+GGG - chr5_1:46537471-46537490 Msa0733290:CDS 35.0%
CTACCTTTAATGTGATCTTG+TGG + chr5_1:46537851-46537870 None:intergenic 35.0%
CACAAGATCACATTAAAGGT+AGG - chr5_1:46537849-46537868 Msa0733290:intron 35.0%
AAATTCCTCAGCAACATAAC+TGG + chr5_1:46537879-46537898 None:intergenic 35.0%
AGTTATGTTGCTGAGGAATT+TGG - chr5_1:46537878-46537897 Msa0733290:intron 35.0%
AGGAATTTGGACATAAATGC+TGG - chr5_1:46537891-46537910 Msa0733290:intron 35.0%
ATGGGAAGATATGTATTGGA+AGG - chr5_1:46537948-46537967 Msa0733290:CDS 35.0%
GAAGATATGTATTGGAAGGA+AGG - chr5_1:46537952-46537971 Msa0733290:CDS 35.0%
TGATTTCAGGAAGCAACATT+GGG - chr5_1:46537976-46537995 Msa0733290:CDS 35.0%
CATTGCGAAACAAACAGTAA+TGG + chr5_1:46538081-46538100 None:intergenic 35.0%
TGGAGACTGCTACATATAAT+TGG + chr5_1:46538178-46538197 None:intergenic 35.0%
AATTATATGTAGCAGTCTCC+AGG - chr5_1:46538177-46538196 Msa0733290:intron 35.0%
ATTATATGTAGCAGTCTCCA+GGG - chr5_1:46538178-46538197 Msa0733290:intron 35.0%
CACAACAAATGTCGTATACA+AGG - chr5_1:46538262-46538281 Msa0733290:CDS 35.0%
AACAAATGTCGTATACAAGG+AGG - chr5_1:46538265-46538284 Msa0733290:CDS 35.0%
!! GTGTATTGATTGGAAACTGC+CGG + chr5_1:46532436-46532455 None:intergenic 40.0%
CAGCGATAGTGAAACACTAT+CGG - chr5_1:46532626-46532645 Msa0733290:CDS 40.0%
ACTATCGGATGAATTGGATG+TGG - chr5_1:46532641-46532660 Msa0733290:CDS 40.0%
GCGCAATTAAACCAATCATG+AGG + chr5_1:46532681-46532700 None:intergenic 40.0%
CTAAAAAAGGGACAAGATGC+AGG - chr5_1:46532869-46532888 Msa0733290:CDS 40.0%
! TATTGATTGGAAATTGCCGG+CGG + chr5_1:46532946-46532965 None:intergenic 40.0%
CAGCAATAGCGAAACACTAT+CGG - chr5_1:46533115-46533134 Msa0733290:CDS 40.0%
ACTATCGGATGAATCAGATG+TGG - chr5_1:46533130-46533149 Msa0733290:CDS 40.0%
AGATTGAACCCACTCATGAT+TGG - chr5_1:46533156-46533175 Msa0733290:CDS 40.0%
TTTGCTTCCCACAGAAAACA+TGG - chr5_1:46533308-46533327 Msa0733290:CDS 40.0%
! CATCACTTCCATGTTTTCTG+TGG + chr5_1:46533319-46533338 None:intergenic 40.0%
CACAGAAAACATGGAAGTGA+TGG - chr5_1:46533317-46533336 Msa0733290:CDS 40.0%
TTGGTTGAATCCGATACAGT+TGG - chr5_1:46533390-46533409 Msa0733290:CDS 40.0%
! AGGTAATCGGCAAGCATTTT+TGG + chr5_1:46533423-46533442 None:intergenic 40.0%
CAATCCTTACAAACATACCG+CGG + chr5_1:46533555-46533574 None:intergenic 40.0%
AGGATTGCAACGCATTAATG+TGG - chr5_1:46533568-46533587 Msa0733290:CDS 40.0%
! TTTTCTATGTGCTGCATGCA+AGG - chr5_1:46533636-46533655 Msa0733290:CDS 40.0%
ATGTTCGCCTTCACTTCAAT+TGG - chr5_1:46533771-46533790 Msa0733290:CDS 40.0%
CTTTGCACCAATTGAAGTGA+AGG + chr5_1:46533781-46533800 None:intergenic 40.0%
CCCCCAGTATTTACAATGAA+TGG - chr5_1:46533831-46533850 Msa0733290:CDS 40.0%
! CTGATAACGAAACTCGCAAT+CGG - chr5_1:46533934-46533953 Msa0733290:CDS 40.0%
TAATGCACCAACTGCATTAG+AGG - chr5_1:46534354-46534373 Msa0733290:CDS 40.0%
TGTAGGTGATTATGATGCAG+CGG - chr5_1:46534390-46534409 Msa0733290:CDS 40.0%
ATCGTTGTTGAGTGTGTATC+AGG - chr5_1:46534427-46534446 Msa0733290:CDS 40.0%
TCACCGCGAGAGAATATTAA+TGG + chr5_1:46534505-46534524 None:intergenic 40.0%
TTGCATACAAATTGCAGCAG+AGG - chr5_1:46534611-46534630 Msa0733290:CDS 40.0%
TGCATACAAATTGCAGCAGA+GGG - chr5_1:46534612-46534631 Msa0733290:CDS 40.0%
GATTTAGCATGATCGAGTCT+TGG - chr5_1:46534695-46534714 Msa0733290:CDS 40.0%
ATGCAATGGCGATATGTTCT+TGG - chr5_1:46534887-46534906 Msa0733290:CDS 40.0%
TGCAATGGCGATATGTTCTT+GGG - chr5_1:46534888-46534907 Msa0733290:CDS 40.0%
AAAATTCTGCTCACCAAGTC+TGG + chr5_1:46535012-46535031 None:intergenic 40.0%
ATATTTGGCAAAGTCAAGGC+AGG - chr5_1:46535078-46535097 Msa0733290:CDS 40.0%
ACTTCCTCATGCTCATATTC+TGG - chr5_1:46535231-46535250 Msa0733290:CDS 40.0%
AAGACCAGAATATGAGCATG+AGG + chr5_1:46535238-46535257 None:intergenic 40.0%
GAACAATTCGAAAATCGGGA+TGG + chr5_1:46535264-46535283 None:intergenic 40.0%
GAGACAATATTGTAGAGCTC+GGG + chr5_1:46535343-46535362 None:intergenic 40.0%
GTCTCATCCCTTATGATACA+TGG - chr5_1:46535358-46535377 Msa0733290:CDS 40.0%
CACATGGTCCATGTATCATA+AGG + chr5_1:46535369-46535388 None:intergenic 40.0%
CTTATGATACATGGACCATG+TGG - chr5_1:46535367-46535386 Msa0733290:CDS 40.0%
CACTTCCCATTTATCGTACA+TGG + chr5_1:46535412-46535431 None:intergenic 40.0%
AACACCGTTATTGATGCTGA+CGG - chr5_1:46535463-46535482 Msa0733290:intron 40.0%
GTAACCGTCAGCATCAATAA+CGG + chr5_1:46535470-46535489 None:intergenic 40.0%
GTTACCCTGTTTACAGAAGA+AGG - chr5_1:46535485-46535504 Msa0733290:intron 40.0%
TGTCCCTTCTTCTGTAAACA+GGG + chr5_1:46535492-46535511 None:intergenic 40.0%
TTGTCCCTTCTTCTGTAAAC+AGG + chr5_1:46535493-46535512 None:intergenic 40.0%
GTTTACAGAAGAAGGGACAA+TGG - chr5_1:46535493-46535512 Msa0733290:intron 40.0%
! GCATCAATTGTGGGTTGTAT+GGG + chr5_1:46535567-46535586 None:intergenic 40.0%
! AGCATCAATTGTGGGTTGTA+TGG + chr5_1:46535568-46535587 None:intergenic 40.0%
! TCTTGGTGACCATTTGTGTT+GGG + chr5_1:46536013-46536032 None:intergenic 40.0%
AAATGGTCACCAAGACAAAG+AGG - chr5_1:46536018-46536037 Msa0733290:CDS 40.0%
ACTGATACACCTCTTTGTCT+TGG + chr5_1:46536030-46536049 None:intergenic 40.0%
! AGACAAAGAGGTGTATCAGT+TGG - chr5_1:46536030-46536049 Msa0733290:CDS 40.0%
! AAAGAGGTGTATCAGTTGGA+AGG - chr5_1:46536034-46536053 Msa0733290:CDS 40.0%
! CAAATACGACTCCTTTAAGG+AGG - chr5_1:46536164-46536183 Msa0733290:CDS 40.0%
CCAAAATGATGCCTGGTTAA+TGG + chr5_1:46536238-46536257 None:intergenic 40.0%
! CCATTAACCAGGCATCATTT+TGG - chr5_1:46536235-46536254 Msa0733290:CDS 40.0%
! AGGTAGTGTGGTCTAAAACA+TGG - chr5_1:46536325-46536344 Msa0733290:intron 40.0%
! GGTAGTGTGGTCTAAAACAT+GGG - chr5_1:46536326-46536345 Msa0733290:intron 40.0%
AAAGATGACCTCGCATACAA+TGG + chr5_1:46536587-46536606 None:intergenic 40.0%
GTCCCACGGAAAAAATTTCA+AGG - chr5_1:46536723-46536742 Msa0733290:CDS 40.0%
!!! GGTCCTTGAAATTTTTTCCG+TGG + chr5_1:46536729-46536748 None:intergenic 40.0%
ACATCAGTTCTTGGCATAGA+CGG + chr5_1:46536757-46536776 None:intergenic 40.0%
! CATTGAAAGAGGAGCATGAT+CGG - chr5_1:46536839-46536858 Msa0733290:CDS 40.0%
TCATCTGCATTGAGATCCAA+AGG - chr5_1:46536997-46537016 Msa0733290:CDS 40.0%
AGGAGAAATTGTCCTAACAG+TGG - chr5_1:46537017-46537036 Msa0733290:CDS 40.0%
ATAGCAGCACTTCTTATTCC+AGG - chr5_1:46537051-46537070 Msa0733290:CDS 40.0%
! AATTGCCCCAATGGACTTAA+TGG + chr5_1:46537147-46537166 None:intergenic 40.0%
! GATGCACAGACAATGTTTTG+AGG - chr5_1:46537209-46537228 Msa0733290:CDS 40.0%
ATTCTACCAGTGGTTCCTAA+AGG - chr5_1:46537318-46537337 Msa0733290:CDS 40.0%
GCATAAATTCATCACGTCTC+TGG - chr5_1:46537367-46537386 Msa0733290:intron 40.0%
ACCGTGCAAAAGTCTCATAT+TGG + chr5_1:46537421-46537440 None:intergenic 40.0%
ACTATGGATAAGTAGGTCGT+CGG + chr5_1:46537553-46537572 None:intergenic 40.0%
GACCTACTTATCCATAGTTC+AGG - chr5_1:46537555-46537574 Msa0733290:intron 40.0%
CACCTGAACTATGGATAAGT+AGG + chr5_1:46537560-46537579 None:intergenic 40.0%
CAACATGATCACCTGAACTA+TGG + chr5_1:46537569-46537588 None:intergenic 40.0%
TGTTAGCAACAGTACTACTG+GGG + chr5_1:46537767-46537786 None:intergenic 40.0%
CTGTTAGCAACAGTACTACT+GGG + chr5_1:46537768-46537787 None:intergenic 40.0%
!! ATAAATGCTGGCTTGTGCAA+TGG - chr5_1:46537903-46537922 Msa0733290:intron 40.0%
GTGATTTCAGGAAGCAACAT+TGG - chr5_1:46537975-46537994 Msa0733290:CDS 40.0%
GATTTCAGGAAGCAACATTG+GGG - chr5_1:46537977-46537996 Msa0733290:CDS 40.0%
GAAGGTTGCAATGATAGTCT+AGG + chr5_1:46538017-46538036 None:intergenic 40.0%
AACGGAATTCTAGTGTCTGA+AGG + chr5_1:46538035-46538054 None:intergenic 40.0%
TAATGGGAAATTGCCTACGT+TGG + chr5_1:46538064-46538083 None:intergenic 40.0%
! GGTAAAAGGCGCAAAACCAA+CGG - chr5_1:46532367-46532386 Msa0733290:CDS 45.0%
AATTCTGTGACCATTGCCGT+TGG + chr5_1:46532386-46532405 None:intergenic 45.0%
AGATTGAACCCCCTCATGAT+TGG - chr5_1:46532667-46532686 Msa0733290:CDS 45.0%
TTTGCTTCCCACAGAAGACA+TGG - chr5_1:46532822-46532841 Msa0733290:CDS 45.0%
ATCACCTCCATGTCTTCTGT+GGG + chr5_1:46532832-46532851 None:intergenic 45.0%
ATTGATTGGAAATTGCCGGC+GGG + chr5_1:46532945-46532964 None:intergenic 45.0%
!! ATTTTGATGTTGGGGAACCG+CGG - chr5_1:46533535-46533554 Msa0733290:CDS 45.0%
TACAACTCATGCAGGGATTG+AGG + chr5_1:46533693-46533712 None:intergenic 45.0%
! TAGGCAGCAAACTACCGATT+TGG + chr5_1:46533869-46533888 None:intergenic 45.0%
!! GTAGTTTGCTGCCTAAACCA+GGG - chr5_1:46533874-46533893 Msa0733290:CDS 45.0%
!! TAGTTTGCTGCCTAAACCAG+GGG - chr5_1:46533875-46533894 Msa0733290:CDS 45.0%
!! TTAGGTTGATCCCCTGGTTT+AGG + chr5_1:46533888-46533907 None:intergenic 45.0%
TAACGAAACTCGCAATCGGA+TGG - chr5_1:46533938-46533957 Msa0733290:CDS 45.0%
AGAAAAGGGGATACGATGGT+CGG - chr5_1:46534326-46534345 Msa0733290:CDS 45.0%
TTAGCATGATCGAGTCTTGG+CGG - chr5_1:46534698-46534717 Msa0733290:CDS 45.0%
TCGAGTCTTGGCGGTTAAAA+TGG - chr5_1:46534707-46534726 Msa0733290:CDS 45.0%
ATGGCGATATGTTCTTGGGT+TGG - chr5_1:46534892-46534911 Msa0733290:CDS 45.0%
TACATGCAACCACAAATGGC+CGG - chr5_1:46534939-46534958 Msa0733290:CDS 45.0%
! ACAATTTGAAGCCAGCAGAC+AGG - chr5_1:46534986-46535005 Msa0733290:CDS 45.0%
CAATTCGAAAATCGGGATGG+AGG + chr5_1:46535261-46535280 None:intergenic 45.0%
CATAGAAGGAAGCAGTGACT+CGG + chr5_1:46535678-46535697 None:intergenic 45.0%
GAGTCACTGCTTCCTTCTAT+GGG - chr5_1:46535677-46535696 Msa0733290:CDS 45.0%
! GTCTTGGTGACCATTTGTGT+TGG + chr5_1:46536014-46536033 None:intergenic 45.0%
TAAAATTTCTCCCCAGACCC+TGG + chr5_1:46536075-46536094 None:intergenic 45.0%
TTGCTTCGCATTGGGTTTGT+TGG - chr5_1:46536188-46536207 Msa0733290:CDS 45.0%
!! GTTTTAGACCACACTACCTC+TGG + chr5_1:46536324-46536343 None:intergenic 45.0%
GAAAAGCTACTACAGTCCCA+CGG - chr5_1:46536709-46536728 Msa0733290:CDS 45.0%
TTCTTGGCATAGACGGATAG+TGG + chr5_1:46536750-46536769 None:intergenic 45.0%
!! CACTATAATGGGCAGAGTTG+AGG - chr5_1:46536903-46536922 Msa0733290:CDS 45.0%
ATATATGGGTACGGTGGTAC+AGG - chr5_1:46536949-46536968 Msa0733290:CDS 45.0%
CAGCACTTCTTATTCCAGGT+GGG - chr5_1:46537055-46537074 Msa0733290:CDS 45.0%
CGCAATATCAATTGCCCCAA+TGG + chr5_1:46537156-46537175 None:intergenic 45.0%
AGGCTGTTGATCGTAGTTTC+CGG - chr5_1:46537229-46537248 Msa0733290:CDS 45.0%
TTTCCGGGATGTATGCAAAG+CGG - chr5_1:46537245-46537264 Msa0733290:CDS 45.0%
TGCAAAGCGGACATTCCATT+CGG - chr5_1:46537258-46537277 Msa0733290:CDS 45.0%
! TCGTTCTAGGTGGTGACTTT+CGG - chr5_1:46537292-46537311 Msa0733290:CDS 45.0%
CTTTCGGCAAATTCTACCAG+TGG - chr5_1:46537308-46537327 Msa0733290:CDS 45.0%
TATGGATAAGTAGGTCGTCG+GGG + chr5_1:46537551-46537570 None:intergenic 45.0%
CTATGGATAAGTAGGTCGTC+GGG + chr5_1:46537552-46537571 None:intergenic 45.0%
CCTGTTAGCAACAGTACTAC+TGG + chr5_1:46537769-46537788 None:intergenic 45.0%
CCAGTAGTACTGTTGCTAAC+AGG - chr5_1:46537766-46537785 Msa0733290:CDS 45.0%
TCTGGTGTGTGAACATCATC+AGG + chr5_1:46537792-46537811 None:intergenic 45.0%
GAGTTCCAGTTATGTTGCTG+AGG - chr5_1:46537871-46537890 Msa0733290:intron 45.0%
TTGGAAGGAAGGGTGATTTC+AGG - chr5_1:46537963-46537982 Msa0733290:CDS 45.0%
! TTCCGTTCAAGTTCCAACGT+AGG - chr5_1:46538048-46538067 Msa0733290:intron 45.0%
TGCCTACGTTGGAACTTGAA+CGG + chr5_1:46538053-46538072 None:intergenic 45.0%
ATTGATTGGAAACTGCCGGC+TGG + chr5_1:46532432-46532451 None:intergenic 50.0%
CATCACCTCCATGTCTTCTG+TGG + chr5_1:46532833-46532852 None:intergenic 50.0%
CACAGAAGACATGGAGGTGA+TGG - chr5_1:46532831-46532850 Msa0733290:CDS 50.0%
AAAGGGACAAGATGCAGGAG+AGG - chr5_1:46532874-46532893 Msa0733290:CDS 50.0%
GGAACCGCGGTATGTTTGTA+AGG - chr5_1:46533548-46533567 Msa0733290:CDS 50.0%
CTATGTGCTGCATGCAAGGA+AGG - chr5_1:46533640-46533659 Msa0733290:CDS 50.0%
ACTCATGCAGGGATTGAGGT+AGG + chr5_1:46533689-46533708 None:intergenic 50.0%
!! GCAGCAAACTACCGATTTGG+TGG + chr5_1:46533866-46533885 None:intergenic 50.0%
!! GGTAGTTTGCTGCCTAAACC+AGG - chr5_1:46533873-46533892 Msa0733290:CDS 50.0%
!! GCAAACTTAGGTTGATCCCC+TGG + chr5_1:46533894-46533913 None:intergenic 50.0%
GCTGCTACCTCTAATGCAGT+TGG + chr5_1:46534364-46534383 None:intergenic 50.0%
TGCATTAGAGGTAGCAGCCT+TGG - chr5_1:46534366-46534385 Msa0733290:CDS 50.0%
! ATGATGCAGCGGATTTCGAG+AGG - chr5_1:46534401-46534420 Msa0733290:CDS 50.0%
CAGCAGAGGGTCAATGATCA+AGG - chr5_1:46534625-46534644 Msa0733290:CDS 50.0%
AGGCGAGGACAATCCAAGTT+CGG - chr5_1:46534795-46534814 Msa0733290:CDS 50.0%
GAGGACAATCCAAGTTCGGT+GGG - chr5_1:46534799-46534818 Msa0733290:CDS 50.0%
! AGGACAATCCAAGTTCGGTG+GGG - chr5_1:46534800-46534819 Msa0733290:CDS 50.0%
! ATCCAAGTTCGGTGGGGAAA+AGG - chr5_1:46534806-46534825 Msa0733290:CDS 50.0%
! TCCAAGTTCGGTGGGGAAAA+GGG - chr5_1:46534807-46534826 Msa0733290:CDS 50.0%
AAAGGGTTGTGTTACCCGCA+AGG - chr5_1:46534824-46534843 Msa0733290:CDS 50.0%
GTGTTACCCGCAAGGTTTGT+CGG - chr5_1:46534832-46534851 Msa0733290:CDS 50.0%
AAACCATCTCCGGCCATTTG+TGG + chr5_1:46534951-46534970 None:intergenic 50.0%
CGAGTCACTGCTTCCTTCTA+TGG - chr5_1:46535676-46535695 Msa0733290:CDS 50.0%
ACTGCTTCCTTCTATGGGTC+TGG - chr5_1:46535682-46535701 Msa0733290:CDS 50.0%
TGTCTGCATGTGAAGCTGTG+TGG - chr5_1:46535752-46535771 Msa0733290:CDS 50.0%
!! GGAAAGCGTCCCAACACAAA+TGG - chr5_1:46536001-46536020 Msa0733290:CDS 50.0%
AGGATTCACTTTGTGCCACC+AGG - chr5_1:46536054-46536073 Msa0733290:CDS 50.0%
GGATTCACTTTGTGCCACCA+GGG - chr5_1:46536055-46536074 Msa0733290:CDS 50.0%
TGCGAAGCAAGCCTCCTTAA+AGG + chr5_1:46536178-46536197 None:intergenic 50.0%
! TAAGGAGGCTTGCTTCGCAT+TGG - chr5_1:46536179-46536198 Msa0733290:CDS 50.0%
! AAGGAGGCTTGCTTCGCATT+GGG - chr5_1:46536180-46536199 Msa0733290:CDS 50.0%
AAATCAATTTGCGCGGCCAG+AGG - chr5_1:46536305-46536324 Msa0733290:CDS 50.0%
GAACACGCAAGATGCGTCTT+TGG + chr5_1:46536380-46536399 None:intergenic 50.0%
CACGGCACAATTCCACAGTA+TGG - chr5_1:46536489-46536508 Msa0733290:intron 50.0%
CGTCTAGCTGAAGATCTGCA+TGG + chr5_1:46536654-46536673 None:intergenic 50.0%
TACCACTTGACGCCACTGTT+AGG + chr5_1:46537032-46537051 None:intergenic 50.0%
GCAGCACTTCTTATTCCAGG+TGG - chr5_1:46537054-46537073 Msa0733290:CDS 50.0%
GGCTGTTGATCGTAGTTTCC+GGG - chr5_1:46537230-46537249 Msa0733290:CDS 50.0%
TGTCCGCTTTGCATACATCC+CGG + chr5_1:46537251-46537270 None:intergenic 50.0%
AAAGCGGACATTCCATTCGG+AGG - chr5_1:46537261-46537280 Msa0733290:CDS 50.0%
GGACATTCCATTCGGAGGAA+AGG - chr5_1:46537266-46537285 Msa0733290:CDS 50.0%
ACGACAACCTTTCCTCCGAA+TGG + chr5_1:46537276-46537295 None:intergenic 50.0%
GGAGGAAAGGTTGTCGTTCT+AGG - chr5_1:46537279-46537298 Msa0733290:CDS 50.0%
! GGAAAGGTTGTCGTTCTAGG+TGG - chr5_1:46537282-46537301 Msa0733290:CDS 50.0%
! CTGGTTCCTTTAGGAACCAC+TGG + chr5_1:46537327-46537346 None:intergenic 50.0%
!! GCAGAATGGGTATTGGGCAT+TGG - chr5_1:46537477-46537496 Msa0733290:CDS 50.0%
!! TGGGTATTGGGCATTGGTGA+TGG - chr5_1:46537483-46537502 Msa0733290:CDS 50.0%
!! GGCATTGGTGATGGTGTTGT+TGG - chr5_1:46537492-46537511 Msa0733290:CDS 50.0%
GTTGGAGACGCATGTGATGA+TGG - chr5_1:46537510-46537529 Msa0733290:CDS 50.0%
AGGAAGCAACATTGGGGACA+AGG - chr5_1:46537983-46538002 Msa0733290:CDS 50.0%
GAGAGAACACAGATTGCGGT+AGG + chr5_1:46538151-46538170 None:intergenic 50.0%
CCGTGAGAGAACACAGATTG+CGG + chr5_1:46538155-46538174 None:intergenic 50.0%
CCGCAATCTGTGTTCTCTCA+CGG - chr5_1:46538152-46538171 Msa0733290:intron 50.0%
TCCAGGGTGACATCAAGGAA+AGG - chr5_1:46538194-46538213 Msa0733290:CDS 50.0%
ACCTTTCCTTGATGTCACCC+TGG + chr5_1:46538198-46538217 None:intergenic 50.0%
AGGCGCAAAACCAACGGCAA+TGG - chr5_1:46532373-46532392 Msa0733290:CDS 55.0%
GCTTCCCACAGAAGACATGG+AGG - chr5_1:46532825-46532844 Msa0733290:CDS 55.0%
GATTGAGGTAGGCTGGCGAA+TGG + chr5_1:46533678-46533697 None:intergenic 55.0%
ATGCAGGGATTGAGGTAGGC+TGG + chr5_1:46533685-46533704 None:intergenic 55.0%
! GGGCGCCTTGCCATTGTTTT+TGG + chr5_1:46533814-46533833 None:intergenic 55.0%
GAGGTAGCAGCCTTGGTTGT+AGG - chr5_1:46534373-46534392 Msa0733290:CDS 55.0%
!! TGAAGCACTGCTTAGAGGCG+AGG - chr5_1:46534780-46534799 Msa0733290:CDS 55.0%
CGAGGACAATCCAAGTTCGG+TGG - chr5_1:46534798-46534817 Msa0733290:CDS 55.0%
! ACCCTTTTCCCCACCGAACT+TGG + chr5_1:46534811-46534830 None:intergenic 55.0%
TTACCCGCAAGGTTTGTCGG+CGG - chr5_1:46534835-46534854 Msa0733290:CDS 55.0%
CAACCACAAATGGCCGGAGA+TGG - chr5_1:46534945-46534964 Msa0733290:CDS 55.0%
GTCGGAACCAGACCCATAGA+AGG + chr5_1:46535692-46535711 None:intergenic 55.0%
ACTTTGTGCCACCAGGGTCT+GGG - chr5_1:46536061-46536080 Msa0733290:CDS 55.0%
AATTTCTCCCCAGACCCTGG+TGG + chr5_1:46536072-46536091 None:intergenic 55.0%
CGGTTCCCCAAAATGATGCC+TGG + chr5_1:46536245-46536264 None:intergenic 55.0%
AGACGCATCTTGCGTGTTCC+AGG - chr5_1:46536381-46536400 Msa0733290:intron 55.0%
GTCCTAACAGTGGCGTCAAG+TGG - chr5_1:46537027-46537046 Msa0733290:CDS 55.0%
GAATGAGCAGTTCTCCCACC+TGG + chr5_1:46537072-46537091 None:intergenic 55.0%
GTGGGAGAACTGCTCATTCC+AGG - chr5_1:46537073-46537092 Msa0733290:CDS 55.0%
GCAACAGTACTACTGGGGCA+AGG + chr5_1:46537762-46537781 None:intergenic 55.0%
CAGTCTCCAGGGTGACATCA+AGG - chr5_1:46538189-46538208 Msa0733290:intron 55.0%
ATGCCCAGAAGACGTCCAGC+CGG - chr5_1:46532414-46532433 Msa0733290:CDS 60.0%
ATGCCCAAAAGACGTCCCGC+CGG - chr5_1:46532927-46532946 Msa0733290:CDS 60.0%
! TTGCCGGCGGGACGTCTTTT+GGG + chr5_1:46532933-46532952 None:intergenic 60.0%
! ATTGCCGGCGGGACGTCTTT+TGG + chr5_1:46532934-46532953 None:intergenic 60.0%
GCAATCGGATGGCATCCGTG+AGG - chr5_1:46533949-46533968 Msa0733290:CDS 60.0%
TGCACCGCCGACAAACCTTG+CGG + chr5_1:46534842-46534861 None:intergenic 60.0%
ACCAAGTCTGGCCTGTCTGC+TGG + chr5_1:46535000-46535019 None:intergenic 60.0%
!! AGGAAGCAGTGACTCGGTCG+TGG + chr5_1:46535672-46535691 None:intergenic 60.0%
CACTTTGTGCCACCAGGGTC+TGG - chr5_1:46536060-46536079 Msa0733290:CDS 60.0%
CTTTGTGCCACCAGGGTCTG+GGG - chr5_1:46536062-46536081 Msa0733290:CDS 60.0%
! CTGCCGGCTGGACGTCTTCT+GGG + chr5_1:46532420-46532439 None:intergenic 65.0%
! ACTGCCGGCTGGACGTCTTC+TGG + chr5_1:46532421-46532440 None:intergenic 65.0%
GCACCGCCGACAAACCTTGC+GGG + chr5_1:46534841-46534860 None:intergenic 65.0%
GCCAGCAGACAGGCCAGACT+TGG - chr5_1:46534996-46535015 Msa0733290:CDS 65.0%
TTGCGCGGCCAGAGGTAGTG+TGG - chr5_1:46536313-46536332 Msa0733290:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 46532358 46538304 46532358 ID=Msa0733290;Name=Msa0733290
chr5_1 mRNA 46532358 46538304 46532358 ID=Msa0733290-mRNA-1;Parent=Msa0733290;Name=Msa0733290-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.55|1|1|9|0|1623
chr5_1 exon 46538193 46538304 46538193 ID=Msa0733290-mRNA-1:exon:13264;Parent=Msa0733290-mRNA-1
chr5_1 exon 46537921 46538052 46537921 ID=Msa0733290-mRNA-1:exon:13263;Parent=Msa0733290-mRNA-1
chr5_1 exon 46537680 46537826 46537680 ID=Msa0733290-mRNA-1:exon:13262;Parent=Msa0733290-mRNA-1
chr5_1 exon 46537432 46537563 46537432 ID=Msa0733290-mRNA-1:exon:13261;Parent=Msa0733290-mRNA-1
chr5_1 exon 46536692 46537340 46536692 ID=Msa0733290-mRNA-1:exon:13260;Parent=Msa0733290-mRNA-1
chr5_1 exon 46536408 46536486 46536408 ID=Msa0733290-mRNA-1:exon:13259;Parent=Msa0733290-mRNA-1
chr5_1 exon 46535563 46536334 46535563 ID=Msa0733290-mRNA-1:exon:13258;Parent=Msa0733290-mRNA-1
chr5_1 exon 46534260 46535462 46534260 ID=Msa0733290-mRNA-1:exon:13257;Parent=Msa0733290-mRNA-1
chr5_1 exon 46532358 46534003 46532358 ID=Msa0733290-mRNA-1:exon:13256;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46538193 46538304 46538193 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46537921 46538052 46537921 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46537680 46537826 46537680 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46537432 46537563 46537432 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46536692 46537340 46536692 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46536408 46536486 46536408 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46535563 46536334 46535563 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46534260 46535462 46534260 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
chr5_1 CDS 46532358 46534003 46532358 ID=Msa0733290-mRNA-1:cds;Parent=Msa0733290-mRNA-1
Gene Sequence

>Msa0733290

ATGGAATCTGGTAAAAGGCGCAAAACCAACGGCAATGGTCACAGAATTCAAAACATATGCCCAGAAGACGTCCAGCCGGCAGTTTCCAATCAATACACTTACGATAATGGAGGAGATGACGTTGATATCAGCGATAGTGAAACACTATCGGATGAATTGGATGTGGATGAGATTGAACCCCCTCATGATTGGTTTAATTGCGCACAAAATAGCGAGCACTATGATGTTCCTGATAATGATTATGAAGACATGGAGGTGATGGAAAACAGCATGCAATCTAAAAAAGGGACAAGATGCAGGAGAGGAAAATTATTGGTTGAATCCGATACATACATATGCCCAAAAGACGTCCCGCCGGCAATTTCCAATCAATACACTTACGATAATGAAGGAGATGACGTTGATATCAGCAATAGCGAAACACTATCGGATGAATCAGATGTGGATGAGATTGAACCCACTCATGATTGGTTTAATTGCGCGCAAAATAGCGAGCAGTATGATGTTCCTAATAATGATTATGAAAACATGGAAGTGATGGAAAACAGCATGCAATCTAAAAAAAGGATAAGACGCAGGAGAACAAAATTATTGGTTGAATCCGATACAGTTGGTAAATTTCCAAAAATGCTTGCCGATTACCTCGAATTAATTAATATTGGTTTTTTTAAAATTGATTGGATGACACACTCTAAAACTATTAATGTTGCGCATGTCTCCCTTGATTATTCAGAATATTTTGATGTTGGGGAACCGCGGTATGTTTGTAAGGATTGCAACGCATTAATGTGGTATGAAGAGAGAGCAAATAAAAACAGACGCACGTCAACACCAGAATTTTCTATGTGCTGCATGCAAGGAAGGATAGAGATTGCACCATTCGCCAGCCTACCTCAATCCCTGCATGAGTTGTATTTTAAAGATGATAGAAAGAGCAAATATTTTTTGGATAACATTAGATCATTTAACAGCATGTTCGCCTTCACTTCAATTGGTGCAAAGATCGATAAGACCAAAAACAATGGCAAGGCGCCCCCAGTATTTACAATGAATGGAGAAAATTACCACCAAATCGGTAGTTTGCTGCCTAAACCAGGGGATCAACCTAAGTTTGCACAATTGTATATATATGATACTGATAACGAAACTCGCAATCGGATGGCATCCGTGAGAATGGACGACGATAGAAATTCTTTGAGGTCAAGTATTGTTGACGAGTTAAGGCATATGCTTGATGCCGCAAATTCATTTAAAAGGGGATACGATGGTCGGCGTTATAATGCACCAACTGCATTAGAGGTAGCAGCCTTGGTTGTAGGTGATTATGATGCAGCGGATTTCGAGAGGAACATCGTTGTTGAGTGTGTATCAGGTCTGCTCAAATGTATATCCGTTTTTGAGACATCATACTTACCGCTACAATATCCATTAATATTCTCTCGCGGTGAAGACGATTTTCGACGAGATATTCGATTTTCGGAAAAAGAAACAAAGAATCCCATCAAAAGAATTTTTGTATCAATGAAAGAGTGGTTTGCATACAAATTGCAGCAGAGGGTCAATGATCAAGGAGCATTATTGTATTCGAGAAAGTTGTTACAACAATTTTGTTGCGATGGATTTAGCATGATCGAGTCTTGGCGGTTAAAATGGTACCGTGATCACCAAAAAGATGTTAGAGCTGATATGTACAAGGGATTATATGAAGCACTGCTTAGAGGCGAGGACAATCCAAGTTCGGTGGGGAAAAGGGTTGTGTTACCCGCAAGGTTTGTCGGCGGTGCACGTTACATGATTCAAAATTATCAAGATGCAATGGCGATATGTTCTTGGGTTGGTTATCCTGATCTTTTTATTACATTTACATGCAACCACAAATGGCCGGAGATGGTTTCATACTTAAAGAAACACAATTTGAAGCCAGCAGACAGGCCAGACTTGGTGAGCAGAATTTTTAAAATTAAACTTAATCATTTAATTCAAGAGATACGAAATGGAAAGATATTTGGCAAAGTCAAGGCAGTTATTTATACAATTGAATTTCAAAAACGAGGACTTCCTCATGCTCATATTCTGGTCTTCCTCCATCCCGATTTTCGAATTGTTCATCCAAGTAACATTGACAAGATAATATGTGCTGAAATTCCGGACAAAGAAAAAAATCCCGAGCTCTACAATATTGTCTCATCCCTTATGATACATGGACCATGTGGTGATGAAAATATTAATTCACCATGTACGATAAATGGGAAGTGTACAAAGTATTTTCCGAAAAGATATGTCGACAACACCGTTATTGATGCTGACGGTTACCCTGTTTACAGAAGAAGGGACAATGGCGTAACTGTTCAAAAAGGTGATTCATTTGCCGATAATAGATATGTTGTCCCATACAACCCACAATTGATGCTGAAGTTTAATGCACATATTAATGTTGAATGGTGCAATCAATCACGTTCTATCAAATATTTGTTCAAGTACGTTAACAAGGGCCACGACCGAGTCACTGCTTCCTTCTATGGGTCTGGTTCCGACTCTTGCGATGAAATTAAAATGTATTATGATTGTCGCTATTTGTCTGCATGTGAAGCTGTGTGGAGAATTTTTTCTTTCGATATTAATTATAGATATCCTTCTGTAGAACGATTGAGTTTTCATTTAGAAGGGGAAGAGCCTATTATATTTGAAGATGATGATGACTTTGAGGATGTTTTAAATAAACCACATATTCGTGACACAAAATTTTTGGCATGGATGGAGGCAAACAAGATATATGCCGATGCAAAAGATCTCACTTATGGGGAATTCCCATTGAAATTTACATGGAAAGCGTCCCAACACAAATGGTCACCAAGACAAAGAGGTGTATCAGTTGGAAGGATTCACTTTGTGCCACCAGGGTCTGGGGAGAAATTTTACTTGCGCACCTTATTGAATTATGTAAAGGGCCCAACTTCTTATGATGAAATTAAAACAGTGAAAGACATCAAATACGACTCCTTTAAGGAGGCTTGCTTCGCATTGGGTTTGTTGGAAGATGACAAAGAGTTTATTGATGCCATTAACCAGGCATCATTTTGGGGAACCGCTGATTTTATGAGAAGATTATTTGTTACGTTGCTGCTTACAAATCAATTTGCGCGGCCAGAGGTAGTGTGGTCTAAAACATGGGAGAATCTAAGTGATGATATAGTGTATCGCCAAAGACGCATCTTGCGTGTTCCAGATCTTCAGCTAGACGAAGAACAAATAAAAAGCTATGCCCTTGCAGAAATTGAAAAGCTACTACAGTCCCACGGAAAAAATTTCAAGGACCACTATCCGTCTATGCCAAGAACTGATGTCGATATAAATAGTGCTGGGCTTAATAGATTGATTTATGATGAATTGAGATACAATAAAGATTCATTGAAAGAGGAGCATGATCGGTTGATGTCAACGATGACTACTGAACAAAAAAATATTTACGACACTATAATGGGCAGAGTTGAGGCAAATAAAAAAGGTTTATTTTTTATATATGGGTACGGTGGTACAGGAAAAACTTTTATTTGGAGAGCAATGTCATCTGCATTGAGATCCAAAGGAGAAATTGTCCTAACAGTGGCGTCAAGTGGTATAGCAGCACTTCTTATTCCAGGTGGGAGAACTGCTCATTCCAGGTTCCATATACCATTCATTGTTCACGAAAGTTCAACTTGCACCATTGAACCATTAAGTCCATTGGGGCAATTGATATTGCGCGCAAAACTAATAATATGGGACGAAGCGCCAATGATGCACAGACAATGTTTTGAGGCTGTTGATCGTAGTTTCCGGGATGTATGCAAAGCGGACATTCCATTCGGAGGAAAGGTTGTCGTTCTAGGTGGTGACTTTCGGCAAATTCTACCAGTGGTTCCTAAAGGAACCAGAAAAGACATAATAAACGCAAGCATAAATTCATCACGTCTCTGGCGTCATTGTGAGATTTTAACACTAACTACCAATATGAGACTTTTGCACGGTTGTTCAGATGCTGATGTAGATGAATTAAAAGAATTTGCAGAATGGGTATTGGGCATTGGTGATGGTGTTGTTGGAGACGCATGTGATGATGGAATTAATGTGCATATCCCCGACGACCTACTTATCCATAGTTCAGGTGATCATGTTGCATCTATTGTCGAATGCATTTACCCATCTATTTTGCATAATATGAATGATCCAGAGTATTTTAAAAATAGAGCTATTTTAACGCCAAAAAATCTGATTGTCGAAGAAATTAACAATTATGTTATGTCTTTGATACCCGGTGAAGAAAGAACATATTTGAGTTGTGATTCACCTTGCCCCAGTAGTACTGTTGCTAACAGGCCTGATGATGTTCACACACCAGAATTTTTGAACAAAATTAATGCATCAGGTCTTCCTAACCACAAGATCACATTAAAGGTAGGAGTTCCAGTTATGTTGCTGAGGAATTTGGACATAAATGCTGGCTTGTGCAATGGAACACGATTAATCATTACAAGAATGGGAAGATATGTATTGGAAGGAAGGGTGATTTCAGGAAGCAACATTGGGGACAAGGTGTTTGTGCCTAGACTATCATTGCAACCTTCAGACACTAGAATTCCGTTCAAGTTCCAACGTAGGCAATTTCCCATTACTGTTTGTTTCGCAATGACCATTAACAAAAGTCAAGGTCAATCATTAAAACAAGTTGGCGTATACCTACCGCAATCTGTGTTCTCTCACGGCCAATTATATGTAGCAGTCTCCAGGGTGACATCAAGGAAAGGTTTGAAAATACTCATAACTGACGAAAATGGAGATTGCATTGATAACACAACAAATGTCGTATACAAGGAGGTGTTTCATAATGTATAG
Protein sequence

>Msa0733290

MESGKRRKTNGNGHRIQNICPEDVQPAVSNQYTYDNGGDDVDISDSETLSDELDVDEIEPPHDWFNCAQNSEHYDVPDNDYEDMEVMENSMQSKKGTRCRRGKLLVESDTYICPKDVPPAISNQYTYDNEGDDVDISNSETLSDESDVDEIEPTHDWFNCAQNSEQYDVPNNDYENMEVMENSMQSKKRIRRRRTKLLVESDTVGKFPKMLADYLELINIGFFKIDWMTHSKTINVAHVSLDYSEYFDVGEPRYVCKDCNALMWYEERANKNRRTSTPEFSMCCMQGRIEIAPFASLPQSLHELYFKDDRKSKYFLDNIRSFNSMFAFTSIGAKIDKTKNNGKAPPVFTMNGENYHQIGSLLPKPGDQPKFAQLYIYDTDNETRNRMASVRMDDDRNSLRSSIVDELRHMLDAANSFKRGYDGRRYNAPTALEVAALVVGDYDAADFERNIVVECVSGLLKCISVFETSYLPLQYPLIFSRGEDDFRRDIRFSEKETKNPIKRIFVSMKEWFAYKLQQRVNDQGALLYSRKLLQQFCCDGFSMIESWRLKWYRDHQKDVRADMYKGLYEALLRGEDNPSSVGKRVVLPARFVGGARYMIQNYQDAMAICSWVGYPDLFITFTCNHKWPEMVSYLKKHNLKPADRPDLVSRIFKIKLNHLIQEIRNGKIFGKVKAVIYTIEFQKRGLPHAHILVFLHPDFRIVHPSNIDKIICAEIPDKEKNPELYNIVSSLMIHGPCGDENINSPCTINGKCTKYFPKRYVDNTVIDADGYPVYRRRDNGVTVQKGDSFADNRYVVPYNPQLMLKFNAHINVEWCNQSRSIKYLFKYVNKGHDRVTASFYGSGSDSCDEIKMYYDCRYLSACEAVWRIFSFDINYRYPSVERLSFHLEGEEPIIFEDDDDFEDVLNKPHIRDTKFLAWMEANKIYADAKDLTYGEFPLKFTWKASQHKWSPRQRGVSVGRIHFVPPGSGEKFYLRTLLNYVKGPTSYDEIKTVKDIKYDSFKEACFALGLLEDDKEFIDAINQASFWGTADFMRRLFVTLLLTNQFARPEVVWSKTWENLSDDIVYRQRRILRVPDLQLDEEQIKSYALAEIEKLLQSHGKNFKDHYPSMPRTDVDINSAGLNRLIYDELRYNKDSLKEEHDRLMSTMTTEQKNIYDTIMGRVEANKKGLFFIYGYGGTGKTFIWRAMSSALRSKGEIVLTVASSGIAALLIPGGRTAHSRFHIPFIVHESSTCTIEPLSPLGQLILRAKLIIWDEAPMMHRQCFEAVDRSFRDVCKADIPFGGKVVVLGGDFRQILPVVPKGTRKDIINASINSSRLWRHCEILTLTTNMRLLHGCSDADVDELKEFAEWVLGIGDGVVGDACDDGINVHIPDDLLIHSSGDHVASIVECIYPSILHNMNDPEYFKNRAILTPKNLIVEEINNYVMSLIPGEERTYLSCDSPCPSSTVANRPDDVHTPEFLNKINASGLPNHKITLKVGVPVMLLRNLDINAGLCNGTRLIITRMGRYVLEGRVISGSNIGDKVFVPRLSLQPSDTRIPFKFQRRQFPITVCFAMTINKSQGQSLKQVGVYLPQSVFSHGQLYVAVSRVTSRKGLKILITDENGDCIDNTTNVVYKEVFHNV*