Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273100 | XP_003616287.1 | 62.247 | 445 | 161 | 2 | 1 | 439 | 1 | 444 | 0.0 | 594 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273100 | sp|Q65XV7|RFA1C_ORYSJ | 21.720 | 465 | 306 | 17 | 8 | 445 | 310 | 743 | 3.28e-15 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0273100 | 0.817308 | 3.527485e-52 | -8.615850e-47 |
| Msa0015400 | Msa0273100 | 0.859989 | 2.823877e-63 | -8.615850e-47 |
| Msa0016570 | Msa0273100 | 0.823148 | 1.619161e-53 | -8.615850e-47 |
| Msa0016580 | Msa0273100 | 0.832106 | 1.142039e-55 | -8.615850e-47 |
| Msa0017070 | Msa0273100 | 0.805929 | 1.052812e-49 | -8.615850e-47 |
| Msa0026450 | Msa0273100 | 0.811668 | 6.239293e-51 | -8.615850e-47 |
| Msa0036920 | Msa0273100 | 0.805252 | 1.460054e-49 | -8.615850e-47 |
| Msa0044260 | Msa0273100 | 0.809799 | 1.582645e-50 | -8.615850e-47 |
| Msa0045790 | Msa0273100 | 0.802329 | 5.907032e-49 | -8.615850e-47 |
| Msa0046160 | Msa0273100 | 0.803108 | 4.079321e-49 | -8.615850e-47 |
| Msa0105070 | Msa0273100 | 0.800210 | 1.603900e-48 | -8.615850e-47 |
| Msa0107580 | Msa0273100 | 0.822474 | 2.324211e-53 | -8.615850e-47 |
| Msa0110270 | Msa0273100 | 0.817962 | 2.511721e-52 | -8.615850e-47 |
| Msa0130970 | Msa0273100 | 0.810017 | 1.420801e-50 | -8.615850e-47 |
| Msa0131770 | Msa0273100 | 0.890625 | 8.318452e-74 | -8.615850e-47 |
| Msa0142220 | Msa0273100 | 0.858803 | 6.408939e-63 | -8.615850e-47 |
| Msa0145260 | Msa0273100 | 0.804971 | 1.672057e-49 | -8.615850e-47 |
| Msa0153910 | Msa0273100 | 0.820164 | 7.928292e-53 | -8.615850e-47 |
| Msa0175740 | Msa0273100 | 0.812468 | 4.175172e-51 | -8.615850e-47 |
| Msa0198910 | Msa0273100 | 0.806350 | 8.583908e-50 | -8.615850e-47 |
| Msa0202880 | Msa0273100 | 0.801410 | 9.123874e-49 | -8.615850e-47 |
| Msa0204840 | Msa0273100 | 0.811214 | 7.828829e-51 | -8.615850e-47 |
| Msa0229590 | Msa0273100 | 0.806956 | 6.393157e-50 | -8.615850e-47 |
| Msa0233080 | Msa0273100 | 0.834409 | 3.048401e-56 | -8.615850e-47 |
| Msa0235140 | Msa0273100 | 0.801045 | 1.083721e-48 | -8.615850e-47 |
| Msa0251320 | Msa0273100 | 0.836774 | 7.682787e-57 | -8.615850e-47 |
| Msa0251640 | Msa0273100 | 0.808766 | 2.635702e-50 | -8.615850e-47 |
| Msa0273100 | Msa0290870 | 0.826969 | 2.026623e-54 | -8.615850e-47 |
| Msa0273100 | Msa0295770 | 0.819330 | 1.229386e-52 | -8.615850e-47 |
| Msa0273100 | Msa0305190 | 0.824580 | 7.475362e-54 | -8.615850e-47 |
| Msa0273100 | Msa0307540 | 0.821304 | 4.336525e-53 | -8.615850e-47 |
| Msa0273100 | Msa0340450 | 0.811433 | 7.017476e-51 | -8.615850e-47 |
| Msa0273100 | Msa0344690 | -0.800426 | 1.449267e-48 | -8.615850e-47 |
| Msa0273100 | Msa0350870 | 0.804162 | 2.465697e-49 | -8.615850e-47 |
| Msa0273100 | Msa0363790 | 0.801869 | 7.346580e-49 | -8.615850e-47 |
| Msa0273100 | Msa0367870 | 0.802592 | 5.215157e-49 | -8.615850e-47 |
| Msa0273100 | Msa0389270 | 0.801620 | 8.264689e-49 | -8.615850e-47 |
| Msa0273100 | Msa0390070 | 0.809431 | 1.898950e-50 | -8.615850e-47 |
| Msa0273100 | Msa0395790 | 0.804916 | 1.716571e-49 | -8.615850e-47 |
| Msa0273100 | Msa0414230 | 0.803363 | 3.612290e-49 | -8.615850e-47 |
| Msa0273100 | Msa0417100 | 0.800044 | 1.733333e-48 | -8.615850e-47 |
| Msa0273100 | Msa0436800 | 0.812694 | 3.726703e-51 | -8.615850e-47 |
| Msa0273100 | Msa0450000 | 0.801864 | 7.363816e-49 | -8.615850e-47 |
| Msa0273100 | Msa0453120 | 0.802238 | 6.168584e-49 | -8.615850e-47 |
| Msa0273100 | Msa0455760 | 0.810658 | 1.033218e-50 | -8.615850e-47 |
| Msa0273100 | Msa0464680 | 0.803702 | 3.073289e-49 | -8.615850e-47 |
| Msa0273100 | Msa0485370 | 0.812920 | 3.324785e-51 | -8.615850e-47 |
| Msa0273100 | Msa0512900 | 0.824877 | 6.360146e-54 | -8.615850e-47 |
| Msa0273100 | Msa0516170 | 0.805545 | 1.267780e-49 | -8.615850e-47 |
| Msa0273100 | Msa0537500 | 0.824857 | 6.429841e-54 | -8.615850e-47 |
| Msa0273100 | Msa0541130 | 0.805762 | 1.141265e-49 | -8.615850e-47 |
| Msa0273100 | Msa0545700 | 0.810423 | 1.161167e-50 | -8.615850e-47 |
| Msa0273100 | Msa0553240 | 0.807644 | 4.570096e-50 | -8.615850e-47 |
| Msa0273100 | Msa0592680 | 0.809733 | 1.635110e-50 | -8.615850e-47 |
| Msa0273100 | Msa0600700 | 0.836959 | 6.892372e-57 | -8.615850e-47 |
| Msa0273100 | Msa0607310 | 0.807152 | 5.811298e-50 | -8.615850e-47 |
| Msa0273100 | Msa0615010 | 0.806559 | 7.755266e-50 | -8.615850e-47 |
| Msa0273100 | Msa0650630 | 0.822357 | 2.473910e-53 | -8.615850e-47 |
| Msa0273100 | Msa0661650 | 0.819817 | 9.516439e-53 | -8.615850e-47 |
| Msa0273100 | Msa0678930 | 0.819162 | 1.342155e-52 | -8.615850e-47 |
| Msa0273100 | Msa0688270 | 0.820489 | 6.674989e-53 | -8.615850e-47 |
| Msa0273100 | Msa0694370 | 0.824401 | 8.236127e-54 | -8.615850e-47 |
| Msa0273100 | Msa0697030 | 0.802939 | 4.421007e-49 | -8.615850e-47 |
| Msa0273100 | Msa0697040 | 0.807342 | 5.295948e-50 | -8.615850e-47 |
| Msa0273100 | Msa0703120 | 0.804001 | 2.663070e-49 | -8.615850e-47 |
| Msa0273100 | Msa0724210 | 0.827860 | 1.238786e-54 | -8.615850e-47 |
| Msa0273100 | Msa0726140 | 0.828726 | 7.659665e-55 | -8.615850e-47 |
| Msa0273100 | Msa0729800 | 0.828452 | 8.918495e-55 | -8.615850e-47 |
| Msa0273100 | Msa0731940 | 0.825197 | 5.344381e-54 | -8.615850e-47 |
| Msa0273100 | Msa0733290 | 0.821050 | 4.960245e-53 | -8.615850e-47 |
| Msa0273100 | Msa0735170 | 0.820567 | 6.407751e-53 | -8.615850e-47 |
| Msa0273100 | Msa0741990 | 0.821192 | 4.600939e-53 | -8.615850e-47 |
| Msa0273100 | Msa0745060 | 0.803509 | 3.370143e-49 | -8.615850e-47 |
| Msa0273100 | Msa0753720 | 0.805473 | 1.312743e-49 | -8.615850e-47 |
| Msa0273100 | Msa0760130 | 0.839496 | 1.530322e-57 | -8.615850e-47 |
| Msa0273100 | Msa0762360 | 0.807452 | 5.020013e-50 | -8.615850e-47 |
| Msa0273100 | Msa0764960 | 0.802806 | 4.709865e-49 | -8.615850e-47 |
| Msa0273100 | Msa0766630 | 0.854228 | 1.415488e-61 | -8.615850e-47 |
| Msa0273100 | Msa0767760 | 0.811304 | 7.487315e-51 | -8.615850e-47 |
| Msa0273100 | Msa0768290 | 0.809172 | 2.157434e-50 | -8.615850e-47 |
| Msa0273100 | Msa0768370 | 0.817672 | 2.921051e-52 | -8.615850e-47 |
| Msa0273100 | Msa0784300 | 0.802166 | 6.382579e-49 | -8.615850e-47 |
| Msa0273100 | Msa0789250 | 0.824943 | 6.135556e-54 | -8.615850e-47 |
| Msa0273100 | Msa0806120 | 0.803238 | 3.835666e-49 | -8.615850e-47 |
| Msa0273100 | Msa0810220 | 0.817096 | 3.937052e-52 | -8.615850e-47 |
| Msa0273100 | Msa0811080 | 0.856074 | 4.114407e-62 | -8.615850e-47 |
| Msa0273100 | Msa0820850 | 0.801555 | 8.519232e-49 | -8.615850e-47 |
| Msa0273100 | Msa0826750 | 0.817316 | 3.513670e-52 | -8.615850e-47 |
| Msa0273100 | Msa0832340 | 0.806989 | 6.291760e-50 | -8.615850e-47 |
| Msa0273100 | Msa0846330 | 0.809967 | 1.456282e-50 | -8.615850e-47 |
| Msa0273100 | Msa0846350 | 0.832961 | 7.010144e-56 | -8.615850e-47 |
| Msa0273100 | Msa0848060 | 0.800177 | 1.629090e-48 | -8.615850e-47 |
| Msa0273100 | Msa0861130 | 0.803983 | 2.687053e-49 | -8.615850e-47 |
| Msa0273100 | Msa0864070 | 0.800379 | 1.481411e-48 | -8.615850e-47 |
| Msa0273100 | Msa0880950 | 0.814161 | 1.773674e-51 | -8.615850e-47 |
| Msa0273100 | Msa0885280 | 0.818700 | 1.709115e-52 | -8.615850e-47 |
| Msa0273100 | Msa0885290 | 0.839643 | 1.401420e-57 | -8.615850e-47 |
| Msa0273100 | Msa0888370 | 0.812109 | 5.000996e-51 | -8.615850e-47 |
| Msa0273100 | Msa0892080 | 0.806836 | 6.778046e-50 | -8.615850e-47 |
| Msa0273100 | Msa0895950 | 0.803219 | 3.870037e-49 | -8.615850e-47 |
| Msa0273100 | Msa0898380 | 0.802711 | 4.927271e-49 | -8.615850e-47 |
| Msa0273100 | Msa0901400 | 0.809444 | 1.886335e-50 | -8.615850e-47 |
| Msa0273100 | Msa0907070 | 0.821844 | 3.252127e-53 | -8.615850e-47 |
| Msa0273100 | Msa0914270 | 0.802253 | 6.125201e-49 | -8.615850e-47 |
| Msa0273100 | Msa0925290 | 0.809872 | 1.526593e-50 | -8.615850e-47 |
| Msa0273100 | Msa0926890 | 0.804157 | 2.471738e-49 | -8.615850e-47 |
| Msa0273100 | Msa0927290 | 0.821909 | 3.142055e-53 | -8.615850e-47 |
| Msa0273100 | Msa0927310 | 0.801764 | 7.720439e-49 | -8.615850e-47 |
| Msa0273100 | Msa0927380 | 0.830210 | 3.338008e-55 | -8.615850e-47 |
| Msa0273100 | Msa0935640 | 0.823164 | 1.604941e-53 | -8.615850e-47 |
| Msa0273100 | Msa0935910 | 0.811265 | 7.634372e-51 | -8.615850e-47 |
| Msa0273100 | Msa0939250 | 0.804570 | 2.027658e-49 | -8.615850e-47 |
| Msa0273100 | Msa0942200 | 0.803185 | 3.933554e-49 | -8.615850e-47 |
| Msa0273100 | Msa0954910 | 0.817250 | 3.635302e-52 | -8.615850e-47 |
| Msa0273100 | Msa0964900 | 0.825318 | 5.002927e-54 | -8.615850e-47 |
| Msa0273100 | Msa0965610 | 0.803024 | 4.246932e-49 | -8.615850e-47 |
| Msa0273100 | Msa0967280 | 0.802170 | 6.369877e-49 | -8.615850e-47 |
| Msa0273100 | Msa0969260 | 0.851972 | 6.262153e-61 | -8.615850e-47 |
| Msa0273100 | Msa0969450 | 0.855290 | 6.968409e-62 | -8.615850e-47 |
| Msa0273100 | Msa0969520 | 0.872214 | 3.778064e-67 | -8.615850e-47 |
| Msa0273100 | Msa0973600 | 0.804483 | 2.114205e-49 | -8.615850e-47 |
| Msa0273100 | Msa0974080 | 0.811332 | 7.380550e-51 | -8.615850e-47 |
| Msa0273100 | Msa0975220 | 0.811117 | 8.220625e-51 | -8.615850e-47 |
| Msa0273100 | Msa0976670 | 0.800432 | 1.445274e-48 | -8.615850e-47 |
| Msa0273100 | Msa0997370 | 0.810635 | 1.044988e-50 | -8.615850e-47 |
| Msa0273100 | Msa1014540 | 0.826678 | 2.377258e-54 | -8.615850e-47 |
| Msa0273100 | Msa1015490 | 0.823231 | 1.548494e-53 | -8.615850e-47 |
| Msa0273100 | Msa1019150 | 0.814826 | 1.263882e-51 | -8.615850e-47 |
| Msa0273100 | Msa1024240 | 0.802881 | 4.545198e-49 | -8.615850e-47 |
| Msa0273100 | Msa1054990 | 0.805067 | 1.596051e-49 | -8.615850e-47 |
| Msa0273100 | Msa1061060 | -0.804928 | 1.707085e-49 | -8.615850e-47 |
| Msa0273100 | Msa1075220 | -0.806086 | 9.758014e-50 | -8.615850e-47 |
| Msa0273100 | Msa1075650 | 0.818938 | 1.509784e-52 | -8.615850e-47 |
| Msa0273100 | Msa1082500 | 0.806127 | 9.565458e-50 | -8.615850e-47 |
| Msa0273100 | Msa1114030 | 0.805811 | 1.114487e-49 | -8.615850e-47 |
| Msa0273100 | Msa1120610 | 0.806859 | 6.702767e-50 | -8.615850e-47 |
| Msa0273100 | Msa1121480 | 0.830314 | 3.149086e-55 | -8.615850e-47 |
| Msa0273100 | Msa1121490 | 0.854249 | 1.396078e-61 | -8.615850e-47 |
| Msa0273100 | Msa1136090 | 0.811941 | 5.443029e-51 | -8.615850e-47 |
| Msa0273100 | Msa1137570 | 0.817288 | 3.563769e-52 | -8.615850e-47 |
| Msa0273100 | Msa1137690 | 0.820617 | 6.238227e-53 | -8.615850e-47 |
| Msa0273100 | Msa1146110 | 0.801776 | 7.675380e-49 | -8.615850e-47 |
| Msa0273100 | Msa1147740 | 0.816960 | 4.223269e-52 | -8.615850e-47 |
| Msa0273100 | Msa1160670 | 0.812885 | 3.384930e-51 | -8.615850e-47 |
| Msa0273100 | Msa1162550 | -0.810097 | 1.365667e-50 | -8.615850e-47 |
| Msa0273100 | Msa1179770 | 0.830813 | 2.376608e-55 | -8.615850e-47 |
| Msa0273100 | Msa1185110 | 0.812767 | 3.591969e-51 | -8.615850e-47 |
| Msa0273100 | Msa1187950 | 0.803927 | 2.759417e-49 | -8.615850e-47 |
| Msa0273100 | Msa1188990 | 0.811480 | 6.855490e-51 | -8.615850e-47 |
| Msa0273100 | Msa1205020 | 0.820839 | 5.546718e-53 | -8.615850e-47 |
| Msa0273100 | Msa1246510 | 0.805687 | 1.183827e-49 | -8.615850e-47 |
| Msa0273100 | Msa1248370 | 0.820758 | 5.789846e-53 | -8.615850e-47 |
| Msa0273100 | Msa1249490 | 0.812041 | 5.175439e-51 | -8.615850e-47 |
| Msa0273100 | Msa1251910 | 0.820044 | 8.445387e-53 | -8.615850e-47 |
| Msa0273100 | Msa1253000 | 0.800745 | 1.247816e-48 | -8.615850e-47 |
| Msa0273100 | Msa1268880 | 0.832983 | 6.921275e-56 | -8.615850e-47 |
| Msa0273100 | Msa1282580 | -0.802479 | 5.501881e-49 | -8.615850e-47 |
| Msa0273100 | Msa1284680 | 0.844458 | 7.464849e-59 | -8.615850e-47 |
| Msa0273100 | Msa1286760 | 0.806121 | 9.592133e-50 | -8.615850e-47 |
| Msa0273100 | Msa1288550 | 0.805530 | 1.276709e-49 | -8.615850e-47 |
| Msa0273100 | Msa1289430 | 0.803019 | 4.256756e-49 | -8.615850e-47 |
| Msa0273100 | Msa1313980 | 0.804750 | 1.859088e-49 | -8.615850e-47 |
| Msa0273100 | Msa1320300 | 0.806316 | 8.727265e-50 | -8.615850e-47 |
| Msa0273100 | Msa1329700 | 0.802445 | 5.591057e-49 | -8.615850e-47 |
| Msa0273100 | Msa1340590 | 0.808915 | 2.449054e-50 | -8.615850e-47 |
| Msa0273100 | Msa1353470 | 0.807195 | 5.691261e-50 | -8.615850e-47 |
| Msa0273100 | Msa1366810 | 0.813025 | 3.153648e-51 | -8.615850e-47 |
| Msa0273100 | Msa1372760 | 0.804410 | 2.189183e-49 | -8.615850e-47 |
| Msa0273100 | Msa1373030 | 0.813915 | 2.010311e-51 | -8.615850e-47 |
| Msa0273100 | Msa1388930 | 0.815472 | 9.082621e-52 | -8.615850e-47 |
| Msa0273100 | Msa1392260 | 0.802440 | 5.605169e-49 | -8.615850e-47 |
| Msa0273100 | Msa1397580 | 0.814611 | 1.410761e-51 | -8.615850e-47 |
| Msa0273100 | Msa1397610 | 0.808916 | 2.448434e-50 | -8.615850e-47 |
| Msa0273100 | Msa1403480 | 0.811678 | 6.207295e-51 | -8.615850e-47 |
| Msa0273100 | Msa1409700 | 0.808305 | 3.306624e-50 | -8.615850e-47 |
| Msa0273100 | Msa1410680 | 0.830356 | 3.074909e-55 | -8.615850e-47 |
| Msa0273100 | Msa1411020 | 0.806080 | 9.787845e-50 | -8.615850e-47 |
| Msa0273100 | Msa1412640 | 0.806915 | 6.524637e-50 | -8.615850e-47 |
| Msa0273100 | Msa1422180 | 0.819634 | 1.047905e-52 | -8.615850e-47 |
| Msa0273100 | Msa1423880 | 0.802412 | 5.680118e-49 | -8.615850e-47 |
| Msa0273100 | Msa1434350 | 0.801041 | 1.085433e-48 | -8.615850e-47 |
| Msa0273100 | Msa1436480 | 0.811328 | 7.397654e-51 | -8.615850e-47 |
| Msa0273100 | Msa1439320 | 0.800879 | 1.171606e-48 | -8.615850e-47 |
| Msa0273100 | Msa1440370 | 0.801282 | 9.690596e-49 | -8.615850e-47 |
| Msa0273100 | Msa1440810 | 0.800064 | 1.717058e-48 | -8.615850e-47 |
| Msa0273100 | Msa1453320 | 0.815639 | 8.340778e-52 | -8.615850e-47 |
| Msa0273100 | Msa1457040 | 0.816323 | 5.866705e-52 | -8.615850e-47 |
| Msa0273100 | Msa1466540 | 0.813197 | 2.891033e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273100 | MtrunA17_Chr6g0469931 | 63.563 | 247 | 78 | 4 | 1 | 241 | 1 | 241 | 4.56e-99 | 315 |
| Msa0273100 | MtrunA17_Chr6g0469811 | 58.394 | 137 | 57 | 0 | 2 | 138 | 11 | 147 | 2.55e-55 | 184 |
| Msa0273100 | MtrunA17_Chr2g0279021 | 32.472 | 271 | 181 | 2 | 160 | 428 | 1 | 271 | 5.03e-47 | 169 |
| Msa0273100 | MtrunA17_Chr4g0077081 | 46.324 | 136 | 66 | 1 | 241 | 376 | 27 | 155 | 1.60e-36 | 134 |
| Msa0273100 | MtrunA17_Chr7g0259081 | 41.566 | 166 | 96 | 1 | 8 | 173 | 8 | 172 | 3.24e-35 | 130 |
| Msa0273100 | MtrunA17_Chr7g0234721 | 39.884 | 173 | 103 | 1 | 1 | 173 | 1 | 172 | 1.49e-33 | 129 |
| Msa0273100 | MtrunA17_Chr3g0093401 | 31.818 | 242 | 158 | 2 | 1 | 242 | 1 | 235 | 1.94e-31 | 122 |
| Msa0273100 | MtrunA17_Chr4g0010241 | 40.141 | 142 | 85 | 0 | 51 | 192 | 70 | 211 | 5.38e-28 | 112 |
| Msa0273100 | MtrunA17_Chr8g0374181 | 35.211 | 142 | 91 | 1 | 288 | 428 | 12 | 153 | 1.52e-25 | 106 |
| Msa0273100 | MtrunA17_Chr1g0206481 | 26.068 | 234 | 170 | 3 | 11 | 242 | 11 | 243 | 3.67e-25 | 105 |
| Msa0273100 | MtrunA17_Chr2g0278111 | 24.242 | 264 | 197 | 3 | 8 | 269 | 8 | 270 | 5.65e-24 | 102 |
| Msa0273100 | MtrunA17_Chr5g0411141 | 24.242 | 264 | 197 | 3 | 8 | 269 | 9 | 271 | 6.62e-24 | 102 |
| Msa0273100 | MtrunA17_Chr5g0423441 | 26.339 | 224 | 162 | 3 | 8 | 229 | 8 | 230 | 2.42e-23 | 99.8 |
| Msa0273100 | MtrunA17_Chr4g0019691 | 31.507 | 146 | 95 | 2 | 286 | 428 | 18 | 161 | 4.44e-22 | 94.0 |
| Msa0273100 | MtrunA17_Chr5g0421841 | 26.667 | 210 | 140 | 4 | 8 | 210 | 8 | 210 | 1.14e-21 | 93.6 |
| Msa0273100 | MtrunA17_Chr2g0280031 | 26.244 | 221 | 153 | 4 | 22 | 232 | 3 | 223 | 1.52e-21 | 94.7 |
| Msa0273100 | MtrunA17_Chr1g0193821 | 30.726 | 179 | 100 | 1 | 62 | 240 | 2 | 156 | 1.99e-21 | 94.0 |
| Msa0273100 | MtrunA17_Chr7g0270381 | 30.857 | 175 | 111 | 4 | 142 | 315 | 1 | 166 | 2.76e-21 | 91.3 |
| Msa0273100 | MtrunA17_Chr2g0309041 | 48.958 | 96 | 49 | 0 | 44 | 139 | 1 | 96 | 2.24e-20 | 86.3 |
| Msa0273100 | MtrunA17_Chr1g0167871 | 25.490 | 408 | 275 | 15 | 8 | 400 | 213 | 606 | 7.98e-20 | 93.6 |
| Msa0273100 | MtrunA17_Chr2g0304051 | 37.234 | 94 | 57 | 1 | 267 | 360 | 17 | 108 | 3.75e-16 | 74.7 |
| Msa0273100 | MtrunA17_Chr2g0304851 | 22.135 | 384 | 260 | 11 | 1 | 373 | 5 | 360 | 1.37e-15 | 79.0 |
| Msa0273100 | MtrunA17_Chr4g0044661 | 23.265 | 245 | 174 | 6 | 3 | 240 | 9 | 246 | 1.46e-15 | 79.7 |
| Msa0273100 | MtrunA17_Chr4g0014311 | 29.834 | 181 | 122 | 4 | 267 | 443 | 11 | 190 | 4.58e-15 | 75.9 |
| Msa0273100 | MtrunA17_Chr5g0421741 | 30.709 | 127 | 88 | 0 | 8 | 134 | 8 | 134 | 8.84e-15 | 72.8 |
| Msa0273100 | MtrunA17_Chr1g0148711 | 30.709 | 127 | 88 | 0 | 8 | 134 | 8 | 134 | 8.84e-15 | 72.8 |
| Msa0273100 | MtrunA17_Chr2g0300361 | 21.875 | 384 | 259 | 14 | 13 | 371 | 189 | 556 | 2.31e-12 | 69.7 |
| Msa0273100 | MtrunA17_Chr1g0168201 | 35.593 | 118 | 67 | 4 | 332 | 448 | 15 | 124 | 2.38e-12 | 65.1 |
| Msa0273100 | MtrunA17_Chr6g0471721 | 31.683 | 101 | 69 | 0 | 328 | 428 | 5 | 105 | 8.19e-12 | 65.5 |
| Msa0273100 | MtrunA17_Chr4g0015041 | 39.394 | 66 | 40 | 0 | 144 | 209 | 1 | 66 | 8.11e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273100 | AT1G52950.1 | 26.400 | 375 | 248 | 9 | 8 | 365 | 10 | 373 | 1.71e-39 | 152 |
| Msa0273100 | AT2G05642.1 | 23.303 | 442 | 266 | 8 | 19 | 428 | 19 | 419 | 1.93e-29 | 122 |
| Msa0273100 | AT5G08020.1 | 24.084 | 382 | 265 | 13 | 1 | 365 | 153 | 526 | 5.91e-18 | 87.8 |
| Msa0273100 | AT2G06510.2 | 22.251 | 382 | 259 | 13 | 8 | 365 | 177 | 544 | 8.99e-15 | 77.8 |
| Msa0273100 | AT2G06510.1 | 22.251 | 382 | 259 | 13 | 8 | 365 | 200 | 567 | 9.80e-15 | 77.8 |
| Msa0273100 | AT4G19130.1 | 21.932 | 383 | 263 | 13 | 11 | 371 | 234 | 602 | 2.01e-14 | 77.0 |
| Msa0273100 | AT4G19130.2 | 21.932 | 383 | 263 | 13 | 11 | 371 | 235 | 603 | 2.10e-14 | 77.0 |
| Msa0273100 | AT5G45400.1 | 23.018 | 391 | 260 | 15 | 5 | 371 | 299 | 672 | 2.65e-11 | 67.0 |
Find 154 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAAACACAACTAGAATT+TGG | 0.165230 | 2_3:+4629416 | Msa0273100:CDS |
| CACCGCTGATTATGATTATT+TGG | 0.171120 | 2_3:+4628896 | Msa0273100:CDS |
| ATTTGAAATATCAGCTTATA+TGG | 0.194564 | 2_3:-4628789 | None:intergenic |
| GGGAAGGATGATGTTGTTTA+AGG | 0.226381 | 2_3:+4630213 | Msa0273100:CDS |
| AACTCAATCAAGATCAAGTT+TGG | 0.256910 | 2_3:-4631411 | None:intergenic |
| TAGTTGTGTTTATAACATTC+TGG | 0.271588 | 2_3:-4629408 | None:intergenic |
| CAGCTCCACCCATCATCTTC+TGG | 0.291938 | 2_3:-4629230 | None:intergenic |
| CTGCCGAGAGAGAGTATGTT+AGG | 0.308778 | 2_3:+4629029 | Msa0273100:CDS |
| TGGATGTGATGCCTTAAGTT+TGG | 0.330388 | 2_3:+4631235 | Msa0273100:CDS |
| TGGAGCTGGGGAAGGATTGC+CGG | 0.336395 | 2_3:+4629245 | Msa0273100:CDS |
| GGATGTGATGCCTTAAGTTT+GGG | 0.342991 | 2_3:+4631236 | Msa0273100:CDS |
| CAGTAATATGCACCAGAATC+AGG | 0.344639 | 2_3:-4629808 | None:intergenic |
| CGGTGTGGGCGCAAACTTCT+TGG | 0.348141 | 2_3:-4628878 | None:intergenic |
| TTTCAGAAGAAATTGGTAGA+AGG | 0.353384 | 2_3:+4628699 | Msa0273100:CDS |
| GGATGCTGAGTTGAGTGAAT+TGG | 0.378551 | 2_3:+4630932 | Msa0273100:CDS |
| AGGAGTGTTACTCCTGATTC+TGG | 0.380403 | 2_3:+4629796 | Msa0273100:CDS |
| GCAGTGTTTGTGATGTTTGA+TGG | 0.381812 | 2_3:+4629989 | Msa0273100:CDS |
| CAGATCATGGCTGTGGATCC+TGG | 0.387374 | 2_3:+4631215 | Msa0273100:CDS |
| TATAAACACAACTAGAATTT+GGG | 0.389875 | 2_3:+4629417 | Msa0273100:CDS |
| AGCCTGATCAGGTTTCAAAA+AGG | 0.390572 | 2_3:-4628511 | None:intergenic |
| TACTTCTGTGTAGATGTTGT+TGG | 0.391056 | 2_3:+4628989 | Msa0273100:intron |
| GATGTTGTTGGTTTGATGAC+TGG | 0.398535 | 2_3:+4629001 | Msa0273100:intron |
| AAGGTTGAGTGTGCGTTGTT+TGG | 0.400585 | 2_3:+4629189 | Msa0273100:CDS |
| TCTGGTGTCGTTCCTTCGCT+TGG | 0.401409 | 2_3:+4629607 | Msa0273100:CDS |
| GGAAGGTTTGGTTGAGGGAG+AGG | 0.401689 | 2_3:+4629744 | Msa0273100:CDS |
| GCTGCAGCTCCCGACAGGTC+TGG | 0.402644 | 2_3:-4631284 | None:intergenic |
| CAGAAGATGATGGGTGGAGC+TGG | 0.405806 | 2_3:+4629231 | Msa0273100:CDS |
| CAAAATGATACCTCAAGAAC+TGG | 0.410752 | 2_3:-4631065 | None:intergenic |
| ATCCATGGCATTGAACCTTC+TGG | 0.412452 | 2_3:+4629589 | Msa0273100:CDS |
| CTTCGCTTGGTCCTCGCGTT+AGG | 0.417322 | 2_3:+4629620 | Msa0273100:CDS |
| AGCTATGTGTTGTAGGTATA+AGG | 0.419547 | 2_3:+4629934 | Msa0273100:intron |
| TGGTTGAGGGAGAGGATTGG+TGG | 0.420911 | 2_3:+4629752 | Msa0273100:CDS |
| TCCTGAGATTGTTAGTTTGA+AGG | 0.424223 | 2_3:+4630192 | Msa0273100:CDS |
| TTGTGCTGTTGTGGAAGGTT+TGG | 0.424474 | 2_3:+4629732 | Msa0273100:CDS |
| AATATAACCTTGGAACCATA+TGG | 0.425673 | 2_3:-4629855 | None:intergenic |
| TCAACAGAGTTAGCCTGATC+AGG | 0.429762 | 2_3:-4628522 | None:intergenic |
| TTTATATTTGCAGCAGATCA+TGG | 0.429892 | 2_3:+4631202 | Msa0273100:intron |
| CGCAAGGCATTTGACGCAGT+TGG | 0.430086 | 2_3:+4631350 | Msa0273100:CDS |
| GGGTGATGAGGTTAGTGATT+TGG | 0.435369 | 2_3:+4630442 | Msa0273100:intron |
| TGGTGTTTCATTCAGTGGTA+AGG | 0.437379 | 2_3:+4629170 | Msa0273100:intron |
| CAGAAGAAATTGGTAGAAGG+AGG | 0.441031 | 2_3:+4628702 | Msa0273100:CDS |
| TGTTTGAGTGATATTGTTCC+TGG | 0.441733 | 2_3:+4628435 | Msa0273100:CDS |
| CCCTTCAAACTAACAATCTC+AGG | 0.442351 | 2_3:-4630193 | None:intergenic |
| GCAAACTGAACGACAACAAC+CGG | 0.443208 | 2_3:-4629264 | None:intergenic |
| GTTGTGGAAGGTTTGGTTGA+GGG | 0.444068 | 2_3:+4629739 | Msa0273100:CDS |
| AATGTTGTTGTTACTCCAGC+TGG | 0.446368 | 2_3:+4631005 | Msa0273100:CDS |
| GATGCTGAGTTGAGTGAATT+GGG | 0.450630 | 2_3:+4630933 | Msa0273100:CDS |
| AATTTCACAGCTTCTTCAAA+AGG | 0.450821 | 2_3:-4629448 | None:intergenic |
| GTCGAGAAGACTGCATCTGC+AGG | 0.453268 | 2_3:+4630235 | Msa0273100:CDS |
| GGTCATGTGTCTGAGACATC+TGG | 0.453841 | 2_3:+4631026 | Msa0273100:CDS |
| ATACAGCAACTGCCTTCTAA+TGG | 0.454231 | 2_3:-4628673 | None:intergenic |
| TGCCTTGCGCAAATTCCTCT+TGG | 0.456752 | 2_3:-4631336 | None:intergenic |
| AGATTCATGCCACCATTAGA+AGG | 0.458064 | 2_3:+4628661 | Msa0273100:CDS |
| TGTTGATACATCTATTATTG+AGG | 0.458976 | 2_3:+4630297 | Msa0273100:CDS |
| AGAGTATGTTAGGGATGGAA+AGG | 0.460759 | 2_3:+4629039 | Msa0273100:CDS |
| AATATCACTCAAACAATCAA+TGG | 0.461288 | 2_3:-4628427 | None:intergenic |
| TCTGCAGGGGTCATGTTTGA+TGG | 0.461394 | 2_3:+4630250 | Msa0273100:CDS |
| CCGCAGCTGCAGCTCCCGAC+AGG | 0.464499 | 2_3:-4631289 | None:intergenic |
| ATGTTGTTGGTTTGATGACT+GGG | 0.464793 | 2_3:+4629002 | Msa0273100:CDS |
| AAGCTGTGAAATTTAGAGAA+GGG | 0.466500 | 2_3:+4629458 | Msa0273100:CDS |
| TGATGAGGTTAGTGATTTGG+TGG | 0.466829 | 2_3:+4630445 | Msa0273100:intron |
| CCCTTTCAGGCTGAAAATTG+TGG | 0.469848 | 2_3:+4630160 | Msa0273100:intron |
| CCTGAGATTGTTAGTTTGAA+GGG | 0.471203 | 2_3:+4630193 | Msa0273100:CDS |
| GGATGGAAAGGTTACTAAGA+TGG | 0.473621 | 2_3:+4629051 | Msa0273100:CDS |
| TCATACTTTGCAGTTGCCCC+TGG | 0.477173 | 2_3:+4628738 | Msa0273100:CDS |
| ACTCAATCAAGATCAAGTTT+GGG | 0.477235 | 2_3:-4631410 | None:intergenic |
| GTTGTTTGTGCTGTTGTGGA+AGG | 0.485440 | 2_3:+4629727 | Msa0273100:CDS |
| TTATGTTGTTTGTGCTGTTG+TGG | 0.491017 | 2_3:+4629723 | Msa0273100:CDS |
| GGATCAAGGTGCGTGTGCTT+AGG | 0.496137 | 2_3:+4628472 | Msa0273100:CDS |
| AATGTGCAGTTTGTGTCTGA+TGG | 0.498589 | 2_3:+4630906 | Msa0273100:intron |
| TTTGCAGTTGCCCCTGGTGT+TGG | 0.499276 | 2_3:+4628744 | Msa0273100:CDS |
| AGAAGATGATGGGTGGAGCT+GGG | 0.503992 | 2_3:+4629232 | Msa0273100:CDS |
| GCTGATTATGATTATTTGGT+TGG | 0.504058 | 2_3:+4628900 | Msa0273100:CDS |
| CAACTTAGTTTCTGCAGCCA+AGG | 0.505104 | 2_3:+4630045 | Msa0273100:CDS |
| ATGATGGGTGGAGCTGGGGA+AGG | 0.508937 | 2_3:+4629237 | Msa0273100:CDS |
| GTCTCAGACACATGACCAGC+TGG | 0.510107 | 2_3:-4631020 | None:intergenic |
| CCTGTCGGGAGCTGCAGCTG+CGG | 0.512216 | 2_3:+4631289 | Msa0273100:CDS |
| GTTTGGTTGAGGGAGAGGAT+TGG | 0.513138 | 2_3:+4629749 | Msa0273100:CDS |
| ATCCTGCATGTCGTTGTCAT+AGG | 0.517357 | 2_3:+4629776 | Msa0273100:CDS |
| TGTGTCTCCTCAACAACCTC+AGG | 0.517827 | 2_3:-4630963 | None:intergenic |
| TGTTGTGGAAGGTTTGGTTG+AGG | 0.521717 | 2_3:+4629738 | Msa0273100:CDS |
| GTACGGTATGCGCCAACACC+AGG | 0.522121 | 2_3:-4628756 | None:intergenic |
| CGTTAGGCCTTCGATTGAAG+AGG | 0.523592 | 2_3:+4629636 | Msa0273100:CDS |
| AATATCAGTGTTGCAATCCA+TGG | 0.525062 | 2_3:+4629574 | Msa0273100:intron |
| CACCAGAAGGTTCAATGCCA+TGG | 0.526115 | 2_3:-4629591 | None:intergenic |
| GAAGCTGTGAAATTTAGAGA+AGG | 0.526781 | 2_3:+4629457 | Msa0273100:CDS |
| ATCCTCCATGACTCTCTACC+AGG | 0.529476 | 2_3:-4628453 | None:intergenic |
| AGATTGTTAGTTTGAAGGGA+AGG | 0.530656 | 2_3:+4630197 | Msa0273100:CDS |
| TTCACAGCTTCTTCAAAAGG+AGG | 0.531307 | 2_3:-4629445 | None:intergenic |
| AAACTTAAGGCATCACATCC+AGG | 0.531694 | 2_3:-4631233 | None:intergenic |
| TGAGGTTAGTGATTTGGTGG+AGG | 0.534333 | 2_3:+4630448 | Msa0273100:intron |
| ATTAGAGAAAGTCCATGCAC+AGG | 0.535667 | 2_3:-4628849 | None:intergenic |
| TGTGAAGCATGTGTTCCATA+TGG | 0.535840 | 2_3:+4629840 | Msa0273100:CDS |
| TTGAATGCCATTGTGGAGGA+TGG | 0.542450 | 2_3:+4629697 | Msa0273100:CDS |
| AAATGTTGCTCCAGTTCTTG+AGG | 0.543969 | 2_3:+4631055 | Msa0273100:CDS |
| CTTTAAAAGTCCAGACCTGT+CGG | 0.544066 | 2_3:+4631274 | Msa0273100:CDS |
| ATCCCTAACATACTCTCTCT+CGG | 0.548487 | 2_3:-4629032 | None:intergenic |
| TAGAGAGTCATGGAGGATCA+AGG | 0.553834 | 2_3:+4628458 | Msa0273100:CDS |
| TTTAAAAGTCCAGACCTGTC+GGG | 0.554972 | 2_3:+4631275 | Msa0273100:CDS |
| TTCTGGTGCATATTACTGCA+AGG | 0.555168 | 2_3:+4629813 | Msa0273100:CDS |
| TCAGGCTAACTCTGTTGAGA+TGG | 0.555939 | 2_3:+4628527 | Msa0273100:CDS |
| TGCCGAGAGAGAGTATGTTA+GGG | 0.556551 | 2_3:+4629030 | Msa0273100:CDS |
| GCGAAAATTAAAATATTCCG+AGG | 0.559220 | 2_3:+4629285 | Msa0273100:CDS |
| GGAATTCTGCACTTCTGTCA+AGG | 0.559554 | 2_3:+4630318 | Msa0273100:CDS |
| TGATTCTCTCCAGAAGATGA+TGG | 0.571497 | 2_3:+4629221 | Msa0273100:CDS |
| CTCCTATGACAACGACATGC+AGG | 0.572521 | 2_3:-4629778 | None:intergenic |
| ATGTGTTCCATATGGTTCCA+AGG | 0.573536 | 2_3:+4629848 | Msa0273100:CDS |
| AAGAAATCCTCTTCAATCGA+AGG | 0.574744 | 2_3:-4629643 | None:intergenic |
| GCAGTTTGTGTCTGATGGTG+TGG | 0.575103 | 2_3:+4630911 | Msa0273100:intron |
| TGTTGAGGAGACACAAGTTG+AGG | 0.581077 | 2_3:+4630971 | Msa0273100:CDS |
| TTTGCAGCAGATCATGGCTG+TGG | 0.581220 | 2_3:+4631208 | Msa0273100:intron |
| AATGAAGACAAAGGTGGAGA+GGG | 0.584507 | 2_3:+4628809 | Msa0273100:CDS |
| GAGAGAGAGTATGTTAGGGA+TGG | 0.585755 | 2_3:+4629034 | Msa0273100:CDS |
| TTGTTCCTGGTAGAGAGTCA+TGG | 0.586636 | 2_3:+4628448 | Msa0273100:CDS |
| ATAATCATAATCAGCGGTGT+GGG | 0.589439 | 2_3:-4628892 | None:intergenic |
| TGAATGCCATTGTGGAGGAT+GGG | 0.592525 | 2_3:+4629698 | Msa0273100:CDS |
| GGTGCGTGTGCTTAGGATGT+GGG | 0.592953 | 2_3:+4628479 | Msa0273100:CDS |
| TCGAGAAGACTGCATCTGCA+GGG | 0.595551 | 2_3:+4630236 | Msa0273100:CDS |
| AGGTGCGTGTGCTTAGGATG+TGG | 0.597101 | 2_3:+4628478 | Msa0273100:CDS |
| GAAGATGATGGGTGGAGCTG+GGG | 0.597525 | 2_3:+4629233 | Msa0273100:CDS |
| AGCGAAGGAACGACACCAGA+AGG | 0.598235 | 2_3:-4629604 | None:intergenic |
| TATATGGATGAATCGTAGTA+CGG | 0.602331 | 2_3:-4628773 | None:intergenic |
| AAATGAAGACAAAGGTGGAG+AGG | 0.612097 | 2_3:+4628808 | Msa0273100:CDS |
| AGCCAAGAGGAATTTGCGCA+AGG | 0.614074 | 2_3:+4631334 | Msa0273100:CDS |
| CAGCAACTGCCTTCTAATGG+TGG | 0.615304 | 2_3:-4628670 | None:intergenic |
| TCTGGTGCATATTACTGCAA+GGG | 0.615518 | 2_3:+4629814 | Msa0273100:CDS |
| AGTTCACTTATCCCTGTGCA+TGG | 0.617904 | 2_3:+4628837 | Msa0273100:CDS |
| GGTGACATGCAAATGTTGCT+TGG | 0.620264 | 2_3:+4630010 | Msa0273100:CDS |
| TGAGGATCCTGAGGTTGTTG+AGG | 0.621531 | 2_3:+4630956 | Msa0273100:CDS |
| AATAATCATAATCAGCGGTG+TGG | 0.624084 | 2_3:-4628893 | None:intergenic |
| TACGGTATGCGCCAACACCA+GGG | 0.625010 | 2_3:-4628755 | None:intergenic |
| CGAGAAGACTGCATCTGCAG+GGG | 0.629581 | 2_3:+4630237 | Msa0273100:CDS |
| ATTTCAAATGAAGACAAAGG+TGG | 0.632682 | 2_3:+4628803 | Msa0273100:CDS |
| GATTCTCTCCAGAAGATGAT+GGG | 0.633510 | 2_3:+4629222 | Msa0273100:CDS |
| GATATTTCAAATGAAGACAA+AGG | 0.634663 | 2_3:+4628800 | Msa0273100:CDS |
| CTAACGCGAGGACCAAGCGA+AGG | 0.636906 | 2_3:-4629619 | None:intergenic |
| CTATGAGTTGAATGCCATTG+TGG | 0.639853 | 2_3:+4629690 | Msa0273100:CDS |
| TTAGAGAAAGTCCATGCACA+GGG | 0.640185 | 2_3:-4628848 | None:intergenic |
| TGCTGAAGAGACACAGCCCA+AGG | 0.644959 | 2_3:+4630481 | Msa0273100:CDS |
| ATGTGATGCCTTAAGTTTGG+GGG | 0.656522 | 2_3:+4631238 | Msa0273100:CDS |
| TCTCTCCAGAAGATGATGGG+TGG | 0.657237 | 2_3:+4629225 | Msa0273100:CDS |
| AACCAAATAATCATAATCAG+CGG | 0.658464 | 2_3:-4628898 | None:intergenic |
| TTCAAACTAACAATCTCAGG+AGG | 0.664295 | 2_3:-4630190 | None:intergenic |
| TGAGTTGAGTGAATTGGGTG+AGG | 0.670731 | 2_3:+4630938 | Msa0273100:CDS |
| ATAAATCCCATCCTCCACAA+TGG | 0.672201 | 2_3:-4629704 | None:intergenic |
| TGAATTGGGTGAGGATCCTG+AGG | 0.674440 | 2_3:+4630947 | Msa0273100:CDS |
| ACGGTATGCGCCAACACCAG+GGG | 0.680764 | 2_3:-4628754 | None:intergenic |
| TCAATCGAAGGCCTAACGCG+AGG | 0.683506 | 2_3:-4629631 | None:intergenic |
| GATGTGATGCCTTAAGTTTG+GGG | 0.693755 | 2_3:+4631237 | Msa0273100:CDS |
| TACTACCAGCAAGAAAACGA+AGG | 0.697185 | 2_3:+4631385 | Msa0273100:CDS |
| TGGCTGTCAACAAAGCCAAG+AGG | 0.709700 | 2_3:+4631321 | Msa0273100:CDS |
| GCGTGTGCTTAGGATGTGGG+AGG | 0.715566 | 2_3:+4628482 | Msa0273100:CDS |
| TGAGTTGAATGCCATTGTGG+AGG | 0.719334 | 2_3:+4629693 | Msa0273100:CDS |
| TTCCTGGTAGAGAGTCATGG+AGG | 0.748573 | 2_3:+4628451 | Msa0273100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATATATATTTTTTAGAAA+AGG | - | chr2_3:4630807-4630826 | None:intergenic | 10.0% |
| !!! | TATTATTTGTTTTGTATATC+AGG | + | chr2_3:4628574-4628593 | Msa0273100:intron | 15.0% |
| !!! | TATCATTCAATTATTTTGTA+TGG | + | chr2_3:4629894-4629913 | Msa0273100:intron | 15.0% |
| !! | TATTTATTTATTCTCATTAG+TGG | - | chr2_3:4630772-4630791 | None:intergenic | 15.0% |
| !! | GGGTTTATATAAATTTAAAT+AGG | + | chr2_3:4631105-4631124 | Msa0273100:intron | 15.0% |
| !!! | ATTTGAAATATCAGCTTATA+TGG | - | chr2_3:4628792-4628811 | None:intergenic | 20.0% |
| !!! | AAATTATATTAACCCTGTTT+TGG | + | chr2_3:4629150-4629169 | Msa0273100:intron | 20.0% |
| !! | TTATAAACACAACTAGAATT+TGG | + | chr2_3:4629416-4629435 | Msa0273100:CDS | 20.0% |
| !! | TATAAACACAACTAGAATTT+GGG | + | chr2_3:4629417-4629436 | Msa0273100:CDS | 20.0% |
| !!! | AACTCATAGATATTTTTCTT+GGG | - | chr2_3:4629679-4629698 | None:intergenic | 20.0% |
| !!! | AATAATTGAATGATAGTGAT+GGG | - | chr2_3:4629889-4629908 | None:intergenic | 20.0% |
| !!! | AAATAATTGAATGATAGTGA+TGG | - | chr2_3:4629890-4629909 | None:intergenic | 20.0% |
| !! | TTGAAAATAAACACTAAAAC+CGG | - | chr2_3:4630116-4630135 | None:intergenic | 20.0% |
| !!! | AATTGTTATGTTTTGATGTA+TGG | + | chr2_3:4630374-4630393 | Msa0273100:intron | 20.0% |
| !!! | TCTGTAAAATACTTAATTTG+GGG | - | chr2_3:4630694-4630713 | None:intergenic | 20.0% |
| !! | CTCTGTAAAATACTTAATTT+GGG | - | chr2_3:4630695-4630714 | None:intergenic | 20.0% |
| !! | TCTCTGTAAAATACTTAATT+TGG | - | chr2_3:4630696-4630715 | None:intergenic | 20.0% |
| !!! | AGCATTGAGAAAAAAAATAT+TGG | + | chr2_3:4630727-4630746 | Msa0273100:intron | 20.0% |
| !! | TGAGAAAAAAAATATTGGTA+AGG | + | chr2_3:4630732-4630751 | Msa0273100:intron | 20.0% |
| !!! | TCATTTTGCTTTTATAACTT+TGG | + | chr2_3:4631080-4631099 | Msa0273100:intron | 20.0% |
| !! | AAGTAGACATATTATATTAG+TGG | + | chr2_3:4631128-4631147 | Msa0273100:intron | 20.0% |
| ! | AATATCACTCAAACAATCAA+TGG | - | chr2_3:4628430-4628449 | None:intergenic | 25.0% |
| !!! | GTATGTTTTTCAGAAGAAAT+TGG | + | chr2_3:4628692-4628711 | Msa0273100:CDS | 25.0% |
| ! | GATATTTCAAATGAAGACAA+AGG | + | chr2_3:4628800-4628819 | Msa0273100:CDS | 25.0% |
| ! | AACCAAATAATCATAATCAG+CGG | - | chr2_3:4628901-4628920 | None:intergenic | 25.0% |
| ! | TTTGATGTAGTTACTATGTA+GGG | + | chr2_3:4628937-4628956 | Msa0273100:intron | 25.0% |
| ! | TATTCCGAGGTATAAATTAA+TGG | + | chr2_3:4629298-4629317 | Msa0273100:intron | 25.0% |
| ! | ATTCCGAGGTATAAATTAAT+GGG | + | chr2_3:4629299-4629318 | Msa0273100:intron | 25.0% |
| ! | TTACCCATTAATTTATACCT+CGG | - | chr2_3:4629305-4629324 | None:intergenic | 25.0% |
| ! | TAGTTGTGTTTATAACATTC+TGG | - | chr2_3:4629411-4629430 | None:intergenic | 25.0% |
| !! | ACTCATAGATATTTTTCTTG+GGG | - | chr2_3:4629678-4629697 | None:intergenic | 25.0% |
| !! | CAACTCATAGATATTTTTCT+TGG | - | chr2_3:4629680-4629699 | None:intergenic | 25.0% |
| ! | GGTTTAATCTAATATAACCT+TGG | - | chr2_3:4629868-4629887 | None:intergenic | 25.0% |
| ! | TGTTGATACATCTATTATTG+AGG | + | chr2_3:4630297-4630316 | Msa0273100:CDS | 25.0% |
| ! | GTGTATACTTATTCTATTAG+CGG | + | chr2_3:4630505-4630524 | Msa0273100:intron | 25.0% |
| ! | ATTAGCGGAAAATTTATGTT+AGG | + | chr2_3:4630520-4630539 | Msa0273100:intron | 25.0% |
| !!! | TTTGCTTTTATAACTTTGGT+TGG | + | chr2_3:4631084-4631103 | Msa0273100:intron | 25.0% |
| !!! | TTGCTTTTATAACTTTGGTT+GGG | + | chr2_3:4631085-4631104 | Msa0273100:intron | 25.0% |
| !! | TTATATTAGTGGATGATACT+TGG | + | chr2_3:4631139-4631158 | Msa0273100:intron | 25.0% |
| TTTCAGAAGAAATTGGTAGA+AGG | + | chr2_3:4628699-4628718 | Msa0273100:CDS | 30.0% | |
| TATATGGATGAATCGTAGTA+CGG | - | chr2_3:4628776-4628795 | None:intergenic | 30.0% | |
| ATTTCAAATGAAGACAAAGG+TGG | + | chr2_3:4628803-4628822 | Msa0273100:CDS | 30.0% | |
| GCTGATTATGATTATTTGGT+TGG | + | chr2_3:4628900-4628919 | Msa0273100:CDS | 30.0% | |
| GTTTGATGTAGTTACTATGT+AGG | + | chr2_3:4628936-4628955 | Msa0273100:intron | 30.0% | |
| GCGAAAATTAAAATATTCCG+AGG | + | chr2_3:4629285-4629304 | Msa0273100:CDS | 30.0% | |
| TTATCTGTTTATATGCAGAG+AGG | + | chr2_3:4629377-4629396 | Msa0273100:intron | 30.0% | |
| TATCTGTTTATATGCAGAGA+GGG | + | chr2_3:4629378-4629397 | Msa0273100:intron | 30.0% | |
| AATTTCACAGCTTCTTCAAA+AGG | - | chr2_3:4629451-4629470 | None:intergenic | 30.0% | |
| AAGCTGTGAAATTTAGAGAA+GGG | + | chr2_3:4629458-4629477 | Msa0273100:CDS | 30.0% | |
| AATATAACCTTGGAACCATA+TGG | - | chr2_3:4629858-4629877 | None:intergenic | 30.0% | |
| TTATTGTAGCTATGTGTTGT+AGG | + | chr2_3:4629927-4629946 | Msa0273100:intron | 30.0% | |
| AAATCATCTATAACCAACCT+TGG | - | chr2_3:4630065-4630084 | None:intergenic | 30.0% | |
| ! | TTGGTTATAGATGATTTTCC+TGG | + | chr2_3:4630068-4630087 | Msa0273100:intron | 30.0% |
| !! | TCATGTTTGATGGATCTTTT+AGG | + | chr2_3:4630260-4630279 | Msa0273100:CDS | 30.0% |
| !! | CATGTTTGATGGATCTTTTA+GGG | + | chr2_3:4630261-4630280 | Msa0273100:CDS | 30.0% |
| AGAGAAAAACTACAAATGGA+TGG | - | chr2_3:4630414-4630433 | None:intergenic | 30.0% | |
| CATCAGAGAAAAACTACAAA+TGG | - | chr2_3:4630418-4630437 | None:intergenic | 30.0% | |
| ! | TAGTTTTTCTCTGATGTTGT+GGG | + | chr2_3:4630422-4630441 | Msa0273100:intron | 30.0% |
| AGAATAAGTATACACACCTT+GGG | - | chr2_3:4630500-4630519 | None:intergenic | 30.0% | |
| TAGAATAAGTATACACACCT+TGG | - | chr2_3:4630501-4630520 | None:intergenic | 30.0% | |
| TTGTCAGCAAATAAAACCAA+TGG | - | chr2_3:4630637-4630656 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTATTTGCTGACAA+TGG | + | chr2_3:4630637-4630656 | Msa0273100:intron | 30.0% |
| TGTTGCATTAACTAATTGTG+TGG | + | chr2_3:4630661-4630680 | Msa0273100:intron | 30.0% | |
| GTTGCATTAACTAATTGTGT+GGG | + | chr2_3:4630662-4630681 | Msa0273100:intron | 30.0% | |
| GATACTTTGGTCACTTAAAA+TGG | - | chr2_3:4630858-4630877 | None:intergenic | 30.0% | |
| AACAATTAAGTTCTACAGAG+AGG | - | chr2_3:4631173-4631192 | None:intergenic | 30.0% | |
| TTTATATTTGCAGCAGATCA+TGG | + | chr2_3:4631202-4631221 | Msa0273100:intron | 30.0% | |
| TGTTTGAGTGATATTGTTCC+TGG | + | chr2_3:4628435-4628454 | Msa0273100:CDS | 35.0% | |
| GATCAGGTTTCAAAAAGGTT+GGG | - | chr2_3:4628509-4628528 | None:intergenic | 35.0% | |
| TGATCAGGTTTCAAAAAGGT+TGG | - | chr2_3:4628510-4628529 | None:intergenic | 35.0% | |
| !!! | AACCTTTTTGAAACCTGATC+AGG | + | chr2_3:4628509-4628528 | Msa0273100:CDS | 35.0% |
| !!! | GATGGTTTTGATTGATGAGA+AGG | + | chr2_3:4628545-4628564 | Msa0273100:CDS | 35.0% |
| ATAATCATAATCAGCGGTGT+GGG | - | chr2_3:4628895-4628914 | None:intergenic | 35.0% | |
| AATAATCATAATCAGCGGTG+TGG | - | chr2_3:4628896-4628915 | None:intergenic | 35.0% | |
| ! | CACCGCTGATTATGATTATT+TGG | + | chr2_3:4628896-4628915 | Msa0273100:CDS | 35.0% |
| TACTTCTGTGTAGATGTTGT+TGG | + | chr2_3:4628989-4629008 | Msa0273100:intron | 35.0% | |
| !! | ATGTTGTTGGTTTGATGACT+GGG | + | chr2_3:4629002-4629021 | Msa0273100:CDS | 35.0% |
| !!! | TTTTCGAGTTAACTGACGAA+AGG | + | chr2_3:4629077-4629096 | Msa0273100:CDS | 35.0% |
| CTGAATGAAACACCAAAACA+GGG | - | chr2_3:4629165-4629184 | None:intergenic | 35.0% | |
| ACTGAATGAAACACCAAAAC+AGG | - | chr2_3:4629166-4629185 | None:intergenic | 35.0% | |
| !!! | TGTTTTGGTGTTTCATTCAG+TGG | + | chr2_3:4629165-4629184 | Msa0273100:intron | 35.0% |
| CTTCCATGTCATGAGAATTA+GGG | + | chr2_3:4629327-4629346 | Msa0273100:intron | 35.0% | |
| ! | GGGTTGCATTTTGTAACTTA+TGG | + | chr2_3:4629347-4629366 | Msa0273100:intron | 35.0% |
| GAAGCTGTGAAATTTAGAGA+AGG | + | chr2_3:4629457-4629476 | Msa0273100:CDS | 35.0% | |
| ! | TTTTCTCTGTTGTGTGACTT+TGG | + | chr2_3:4629501-4629520 | Msa0273100:intron | 35.0% |
| AATATCAGTGTTGCAATCCA+TGG | + | chr2_3:4629574-4629593 | Msa0273100:intron | 35.0% | |
| AAGAAATCCTCTTCAATCGA+AGG | - | chr2_3:4629646-4629665 | None:intergenic | 35.0% | |
| ! | TTATGTTGTTTGTGCTGTTG+TGG | + | chr2_3:4629723-4629742 | Msa0273100:CDS | 35.0% |
| AGCTATGTGTTGTAGGTATA+AGG | + | chr2_3:4629934-4629953 | Msa0273100:intron | 35.0% | |
| !! | TTTGATGATGTATCCCTTTC+AGG | + | chr2_3:4630147-4630166 | Msa0273100:intron | 35.0% |
| TTCAAACTAACAATCTCAGG+AGG | - | chr2_3:4630193-4630212 | None:intergenic | 35.0% | |
| ! | TCCTGAGATTGTTAGTTTGA+AGG | + | chr2_3:4630192-4630211 | Msa0273100:CDS | 35.0% |
| ! | CCTGAGATTGTTAGTTTGAA+GGG | + | chr2_3:4630193-4630212 | Msa0273100:CDS | 35.0% |
| ! | AGATTGTTAGTTTGAAGGGA+AGG | + | chr2_3:4630197-4630216 | Msa0273100:CDS | 35.0% |
| ! | GTAGTTTTTCTCTGATGTTG+TGG | + | chr2_3:4630421-4630440 | Msa0273100:intron | 35.0% |
| GCGGAAAATTTATGTTAGGT+AGG | + | chr2_3:4630524-4630543 | Msa0273100:intron | 35.0% | |
| CTTGTCTGCAAACAATTCAT+GGG | - | chr2_3:4630569-4630588 | None:intergenic | 35.0% | |
| TCTTGTCTGCAAACAATTCA+TGG | - | chr2_3:4630570-4630589 | None:intergenic | 35.0% | |
| CAGCAAATAAAACCAATGGT+AGG | - | chr2_3:4630633-4630652 | None:intergenic | 35.0% | |
| TCACTCTGTATTGGATACTT+TGG | - | chr2_3:4630871-4630890 | None:intergenic | 35.0% | |
| CAAAATGATACCTCAAGAAC+TGG | - | chr2_3:4631068-4631087 | None:intergenic | 35.0% | |
| AGCCTGATCAGGTTTCAAAA+AGG | - | chr2_3:4628514-4628533 | None:intergenic | 40.0% | |
| AGATTCATGCCACCATTAGA+AGG | + | chr2_3:4628661-4628680 | Msa0273100:CDS | 40.0% | |
| ATACAGCAACTGCCTTCTAA+TGG | - | chr2_3:4628676-4628695 | None:intergenic | 40.0% | |
| CAGAAGAAATTGGTAGAAGG+AGG | + | chr2_3:4628702-4628721 | Msa0273100:CDS | 40.0% | |
| AAATGAAGACAAAGGTGGAG+AGG | + | chr2_3:4628808-4628827 | Msa0273100:CDS | 40.0% | |
| AATGAAGACAAAGGTGGAGA+GGG | + | chr2_3:4628809-4628828 | Msa0273100:CDS | 40.0% | |
| TTAGAGAAAGTCCATGCACA+GGG | - | chr2_3:4628851-4628870 | None:intergenic | 40.0% | |
| ATTAGAGAAAGTCCATGCAC+AGG | - | chr2_3:4628852-4628871 | None:intergenic | 40.0% | |
| GTAACTACATCAAACCACAC+TGG | - | chr2_3:4628931-4628950 | None:intergenic | 40.0% | |
| !! | GATGTTGTTGGTTTGATGAC+TGG | + | chr2_3:4629001-4629020 | Msa0273100:intron | 40.0% |
| ATCCCTAACATACTCTCTCT+CGG | - | chr2_3:4629035-4629054 | None:intergenic | 40.0% | |
| AGAGTATGTTAGGGATGGAA+AGG | + | chr2_3:4629039-4629058 | Msa0273100:CDS | 40.0% | |
| GGATGGAAAGGTTACTAAGA+TGG | + | chr2_3:4629051-4629070 | Msa0273100:CDS | 40.0% | |
| TGGTGTTTCATTCAGTGGTA+AGG | + | chr2_3:4629170-4629189 | Msa0273100:intron | 40.0% | |
| TGATTCTCTCCAGAAGATGA+TGG | + | chr2_3:4629221-4629240 | Msa0273100:CDS | 40.0% | |
| GATTCTCTCCAGAAGATGAT+GGG | + | chr2_3:4629222-4629241 | Msa0273100:CDS | 40.0% | |
| GCTTCCATGTCATGAGAATT+AGG | + | chr2_3:4629326-4629345 | Msa0273100:intron | 40.0% | |
| CAACCCTAATTCTCATGACA+TGG | - | chr2_3:4629333-4629352 | None:intergenic | 40.0% | |
| TTCACAGCTTCTTCAAAAGG+AGG | - | chr2_3:4629448-4629467 | None:intergenic | 40.0% | |
| ! | CTATGAGTTGAATGCCATTG+TGG | + | chr2_3:4629690-4629709 | Msa0273100:CDS | 40.0% |
| ATAAATCCCATCCTCCACAA+TGG | - | chr2_3:4629707-4629726 | None:intergenic | 40.0% | |
| CAGTAATATGCACCAGAATC+AGG | - | chr2_3:4629811-4629830 | None:intergenic | 40.0% | |
| TTCTGGTGCATATTACTGCA+AGG | + | chr2_3:4629813-4629832 | Msa0273100:CDS | 40.0% | |
| TCTGGTGCATATTACTGCAA+GGG | + | chr2_3:4629814-4629833 | Msa0273100:CDS | 40.0% | |
| TGTGAAGCATGTGTTCCATA+TGG | + | chr2_3:4629840-4629859 | Msa0273100:CDS | 40.0% | |
| ATGTGTTCCATATGGTTCCA+AGG | + | chr2_3:4629848-4629867 | Msa0273100:CDS | 40.0% | |
| GCAGTGTTTGTGATGTTTGA+TGG | + | chr2_3:4629989-4630008 | Msa0273100:CDS | 40.0% | |
| ! | TTTTCCTGGTGACATTGTAG+TGG | + | chr2_3:4630082-4630101 | Msa0273100:intron | 40.0% |
| CATTGTAGTGGTTTCTTCAC+CGG | + | chr2_3:4630094-4630113 | Msa0273100:intron | 40.0% | |
| ! | CCACAATTTTCAGCCTGAAA+GGG | - | chr2_3:4630163-4630182 | None:intergenic | 40.0% |
| ! | TCCACAATTTTCAGCCTGAA+AGG | - | chr2_3:4630164-4630183 | None:intergenic | 40.0% |
| CCCTTCAAACTAACAATCTC+AGG | - | chr2_3:4630196-4630215 | None:intergenic | 40.0% | |
| ! | GGGAAGGATGATGTTGTTTA+AGG | + | chr2_3:4630213-4630232 | Msa0273100:CDS | 40.0% |
| !!! | ATGGATCTTTTAGGGTGAAG+AGG | + | chr2_3:4630269-4630288 | Msa0273100:CDS | 40.0% |
| !!! | TGGATCTTTTAGGGTGAAGA+GGG | + | chr2_3:4630270-4630289 | Msa0273100:CDS | 40.0% |
| TTTGATGTATGGCCTAAGAC+CGG | + | chr2_3:4630385-4630404 | Msa0273100:intron | 40.0% | |
| AACTACAAATGGATGGCAAC+CGG | - | chr2_3:4630407-4630426 | None:intergenic | 40.0% | |
| ! | TGATGAGGTTAGTGATTTGG+TGG | + | chr2_3:4630445-4630464 | Msa0273100:intron | 40.0% |
| TGGTAGGTATACATGTGCTT+TGG | - | chr2_3:4630617-4630636 | None:intergenic | 40.0% | |
| AGCACATGTATACCTACCAT+TGG | + | chr2_3:4630618-4630637 | Msa0273100:intron | 40.0% | |
| AATGTGCAGTTTGTGTCTGA+TGG | + | chr2_3:4630906-4630925 | Msa0273100:intron | 40.0% | |
| ! | GATGCTGAGTTGAGTGAATT+GGG | + | chr2_3:4630933-4630952 | Msa0273100:CDS | 40.0% |
| !! | GACACAAGTTGAGGATTTTG+TGG | + | chr2_3:4630980-4630999 | Msa0273100:CDS | 40.0% |
| ! | AATGTTGTTGTTACTCCAGC+TGG | + | chr2_3:4631005-4631024 | Msa0273100:CDS | 40.0% |
| AAATGTTGCTCCAGTTCTTG+AGG | + | chr2_3:4631055-4631074 | Msa0273100:CDS | 40.0% | |
| ! | AAACTTAAGGCATCACATCC+AGG | - | chr2_3:4631236-4631255 | None:intergenic | 40.0% |
| TGGATGTGATGCCTTAAGTT+TGG | + | chr2_3:4631235-4631254 | Msa0273100:CDS | 40.0% | |
| GGATGTGATGCCTTAAGTTT+GGG | + | chr2_3:4631236-4631255 | Msa0273100:CDS | 40.0% | |
| GATGTGATGCCTTAAGTTTG+GGG | + | chr2_3:4631237-4631256 | Msa0273100:CDS | 40.0% | |
| ATGTGATGCCTTAAGTTTGG+GGG | + | chr2_3:4631238-4631257 | Msa0273100:CDS | 40.0% | |
| ! | CTTTAAAAGTCCAGACCTGT+CGG | + | chr2_3:4631274-4631293 | Msa0273100:CDS | 40.0% |
| TTTAAAAGTCCAGACCTGTC+GGG | + | chr2_3:4631275-4631294 | Msa0273100:CDS | 40.0% | |
| TACTACCAGCAAGAAAACGA+AGG | + | chr2_3:4631385-4631404 | Msa0273100:CDS | 40.0% | |
| TTGTTCCTGGTAGAGAGTCA+TGG | + | chr2_3:4628448-4628467 | Msa0273100:CDS | 45.0% | |
| TAGAGAGTCATGGAGGATCA+AGG | + | chr2_3:4628458-4628477 | Msa0273100:CDS | 45.0% | |
| ! | TCAACAGAGTTAGCCTGATC+AGG | - | chr2_3:4628525-4628544 | None:intergenic | 45.0% |
| TCAGGCTAACTCTGTTGAGA+TGG | + | chr2_3:4628527-4628546 | Msa0273100:CDS | 45.0% | |
| ! | TCCCTTTTCCTTCCTTTCGT+AGG | + | chr2_3:4628632-4628651 | Msa0273100:intron | 45.0% |
| CCCTACGAAAGGAAGGAAAA+GGG | - | chr2_3:4628636-4628655 | None:intergenic | 45.0% | |
| ! | CCCTTTTCCTTCCTTTCGTA+GGG | + | chr2_3:4628633-4628652 | Msa0273100:intron | 45.0% |
| ACCCTACGAAAGGAAGGAAA+AGG | - | chr2_3:4628637-4628656 | None:intergenic | 45.0% | |
| ! | TTTTCCTTCCTTTCGTAGGG+TGG | + | chr2_3:4628636-4628655 | Msa0273100:intron | 45.0% |
| TTTCCTTCCTTTCGTAGGGT+GGG | + | chr2_3:4628637-4628656 | Msa0273100:intron | 45.0% | |
| AGTTCACTTATCCCTGTGCA+TGG | + | chr2_3:4628837-4628856 | Msa0273100:CDS | 45.0% | |
| ! | TGCCGAGAGAGAGTATGTTA+GGG | + | chr2_3:4629030-4629049 | Msa0273100:CDS | 45.0% |
| ! | GAGAGAGAGTATGTTAGGGA+TGG | + | chr2_3:4629034-4629053 | Msa0273100:CDS | 45.0% |
| AAGGTTGAGTGTGCGTTGTT+TGG | + | chr2_3:4629189-4629208 | Msa0273100:CDS | 45.0% | |
| GCAAACTGAACGACAACAAC+CGG | - | chr2_3:4629267-4629286 | None:intergenic | 45.0% | |
| ! | ATCCATGGCATTGAACCTTC+TGG | + | chr2_3:4629589-4629608 | Msa0273100:CDS | 45.0% |
| ! | TGAGTTGAATGCCATTGTGG+AGG | + | chr2_3:4629693-4629712 | Msa0273100:CDS | 45.0% |
| TTGAATGCCATTGTGGAGGA+TGG | + | chr2_3:4629697-4629716 | Msa0273100:CDS | 45.0% | |
| TGAATGCCATTGTGGAGGAT+GGG | + | chr2_3:4629698-4629717 | Msa0273100:CDS | 45.0% | |
| ! | GTTGTTTGTGCTGTTGTGGA+AGG | + | chr2_3:4629727-4629746 | Msa0273100:CDS | 45.0% |
| ! | TTGTGCTGTTGTGGAAGGTT+TGG | + | chr2_3:4629732-4629751 | Msa0273100:CDS | 45.0% |
| ! | TGTTGTGGAAGGTTTGGTTG+AGG | + | chr2_3:4629738-4629757 | Msa0273100:CDS | 45.0% |
| ! | GTTGTGGAAGGTTTGGTTGA+GGG | + | chr2_3:4629739-4629758 | Msa0273100:CDS | 45.0% |
| ATCCTGCATGTCGTTGTCAT+AGG | + | chr2_3:4629776-4629795 | Msa0273100:CDS | 45.0% | |
| !! | AGGAGTGTTACTCCTGATTC+TGG | + | chr2_3:4629796-4629815 | Msa0273100:CDS | 45.0% |
| GGTGACATGCAAATGTTGCT+TGG | + | chr2_3:4630010-4630029 | Msa0273100:CDS | 45.0% | |
| CAACTTAGTTTCTGCAGCCA+AGG | + | chr2_3:4630045-4630064 | Msa0273100:CDS | 45.0% | |
| TTAGTTTCTGCAGCCAAGGT+TGG | + | chr2_3:4630049-4630068 | Msa0273100:intron | 45.0% | |
| GAAACCACTACAATGTCACC+AGG | - | chr2_3:4630089-4630108 | None:intergenic | 45.0% | |
| CCCTTTCAGGCTGAAAATTG+TGG | + | chr2_3:4630160-4630179 | Msa0273100:intron | 45.0% | |
| GGAATTCTGCACTTCTGTCA+AGG | + | chr2_3:4630318-4630337 | Msa0273100:CDS | 45.0% | |
| GGGTGATGAGGTTAGTGATT+TGG | + | chr2_3:4630442-4630461 | Msa0273100:intron | 45.0% | |
| !! | TGAGGTTAGTGATTTGGTGG+AGG | + | chr2_3:4630448-4630467 | Msa0273100:intron | 45.0% |
| ! | GGATGCTGAGTTGAGTGAAT+TGG | + | chr2_3:4630932-4630951 | Msa0273100:CDS | 45.0% |
| ! | TGAGTTGAGTGAATTGGGTG+AGG | + | chr2_3:4630938-4630957 | Msa0273100:CDS | 45.0% |
| TGTTGAGGAGACACAAGTTG+AGG | + | chr2_3:4630971-4630990 | Msa0273100:CDS | 45.0% | |
| TTCCTGGTAGAGAGTCATGG+AGG | + | chr2_3:4628451-4628470 | Msa0273100:CDS | 50.0% | |
| ATCCTCCATGACTCTCTACC+AGG | - | chr2_3:4628456-4628475 | None:intergenic | 50.0% | |
| GAATCTTCCCACCCTACGAA+AGG | - | chr2_3:4628647-4628666 | None:intergenic | 50.0% | |
| CAGCAACTGCCTTCTAATGG+TGG | - | chr2_3:4628673-4628692 | None:intergenic | 50.0% | |
| TCATACTTTGCAGTTGCCCC+TGG | + | chr2_3:4628738-4628757 | Msa0273100:CDS | 50.0% | |
| !! | TTTGGTTGGTGAGTCCAGTG+TGG | + | chr2_3:4628914-4628933 | Msa0273100:intron | 50.0% |
| ! | CTGCCGAGAGAGAGTATGTT+AGG | + | chr2_3:4629029-4629048 | Msa0273100:CDS | 50.0% |
| !! | TCTCTCCAGAAGATGATGGG+TGG | + | chr2_3:4629225-4629244 | Msa0273100:CDS | 50.0% |
| !! | AGAAGATGATGGGTGGAGCT+GGG | + | chr2_3:4629232-4629251 | Msa0273100:CDS | 50.0% |
| CACCAGAAGGTTCAATGCCA+TGG | - | chr2_3:4629594-4629613 | None:intergenic | 50.0% | |
| CGTTAGGCCTTCGATTGAAG+AGG | + | chr2_3:4629636-4629655 | Msa0273100:CDS | 50.0% | |
| GTTTGGTTGAGGGAGAGGAT+TGG | + | chr2_3:4629749-4629768 | Msa0273100:CDS | 50.0% | |
| CTCCTATGACAACGACATGC+AGG | - | chr2_3:4629781-4629800 | None:intergenic | 50.0% | |
| TCGAGAAGACTGCATCTGCA+GGG | + | chr2_3:4630236-4630255 | Msa0273100:CDS | 50.0% | |
| TCTGCAGGGGTCATGTTTGA+TGG | + | chr2_3:4630250-4630269 | Msa0273100:CDS | 50.0% | |
| AATGGATGGCAACCGGTCTT+AGG | - | chr2_3:4630400-4630419 | None:intergenic | 50.0% | |
| CTCTGATGTTGTGGGTGATG+AGG | + | chr2_3:4630430-4630449 | Msa0273100:intron | 50.0% | |
| GCATCTCGCTCACTCTGTAT+TGG | - | chr2_3:4630880-4630899 | None:intergenic | 50.0% | |
| ! | GCAGTTTGTGTCTGATGGTG+TGG | + | chr2_3:4630911-4630930 | Msa0273100:intron | 50.0% |
| TGAATTGGGTGAGGATCCTG+AGG | + | chr2_3:4630947-4630966 | Msa0273100:CDS | 50.0% | |
| TGAGGATCCTGAGGTTGTTG+AGG | + | chr2_3:4630956-4630975 | Msa0273100:CDS | 50.0% | |
| TGTGTCTCCTCAACAACCTC+AGG | - | chr2_3:4630966-4630985 | None:intergenic | 50.0% | |
| ! | GGTCATGTGTCTGAGACATC+TGG | + | chr2_3:4631026-4631045 | Msa0273100:CDS | 50.0% |
| TTTGCAGCAGATCATGGCTG+TGG | + | chr2_3:4631208-4631227 | Msa0273100:intron | 50.0% | |
| GATGCCTTAAGTTTGGGGGA+TGG | + | chr2_3:4631242-4631261 | Msa0273100:CDS | 50.0% | |
| ACCACCATCCCCCAAACTTA+AGG | - | chr2_3:4631249-4631268 | None:intergenic | 50.0% | |
| TGCAGCTGCGGAGAAAAATG+TGG | + | chr2_3:4631301-4631320 | Msa0273100:CDS | 50.0% | |
| TGGCTGTCAACAAAGCCAAG+AGG | + | chr2_3:4631321-4631340 | Msa0273100:CDS | 50.0% | |
| AGCCAAGAGGAATTTGCGCA+AGG | + | chr2_3:4631334-4631353 | Msa0273100:CDS | 50.0% | |
| TGCCTTGCGCAAATTCCTCT+TGG | - | chr2_3:4631339-4631358 | None:intergenic | 50.0% | |
| GGATCAAGGTGCGTGTGCTT+AGG | + | chr2_3:4628472-4628491 | Msa0273100:CDS | 55.0% | |
| AGGTGCGTGTGCTTAGGATG+TGG | + | chr2_3:4628478-4628497 | Msa0273100:CDS | 55.0% | |
| GGTGCGTGTGCTTAGGATGT+GGG | + | chr2_3:4628479-4628498 | Msa0273100:CDS | 55.0% | |
| CTTCCCACCCTACGAAAGGA+AGG | - | chr2_3:4628643-4628662 | None:intergenic | 55.0% | |
| TTTGCAGTTGCCCCTGGTGT+TGG | + | chr2_3:4628744-4628763 | Msa0273100:CDS | 55.0% | |
| TACGGTATGCGCCAACACCA+GGG | - | chr2_3:4628758-4628777 | None:intergenic | 55.0% | |
| CAGCTCCACCCATCATCTTC+TGG | - | chr2_3:4629233-4629252 | None:intergenic | 55.0% | |
| !! | CAGAAGATGATGGGTGGAGC+TGG | + | chr2_3:4629231-4629250 | Msa0273100:CDS | 55.0% |
| !! | GAAGATGATGGGTGGAGCTG+GGG | + | chr2_3:4629233-4629252 | Msa0273100:CDS | 55.0% |
| AGCGAAGGAACGACACCAGA+AGG | - | chr2_3:4629607-4629626 | None:intergenic | 55.0% | |
| !! | TCTGGTGTCGTTCCTTCGCT+TGG | + | chr2_3:4629607-4629626 | Msa0273100:CDS | 55.0% |
| TCAATCGAAGGCCTAACGCG+AGG | - | chr2_3:4629634-4629653 | None:intergenic | 55.0% | |
| ! | GGAAGGTTTGGTTGAGGGAG+AGG | + | chr2_3:4629744-4629763 | Msa0273100:CDS | 55.0% |
| TGGTTGAGGGAGAGGATTGG+TGG | + | chr2_3:4629752-4629771 | Msa0273100:CDS | 55.0% | |
| GTCGAGAAGACTGCATCTGC+AGG | + | chr2_3:4630235-4630254 | Msa0273100:CDS | 55.0% | |
| CGAGAAGACTGCATCTGCAG+GGG | + | chr2_3:4630237-4630256 | Msa0273100:CDS | 55.0% | |
| TGCTGAAGAGACACAGCCCA+AGG | + | chr2_3:4630481-4630500 | Msa0273100:CDS | 55.0% | |
| GTCTCAGACACATGACCAGC+TGG | - | chr2_3:4631023-4631042 | None:intergenic | 55.0% | |
| CAGATCATGGCTGTGGATCC+TGG | + | chr2_3:4631215-4631234 | Msa0273100:CDS | 55.0% | |
| GCCTTAAGTTTGGGGGATGG+TGG | + | chr2_3:4631245-4631264 | Msa0273100:CDS | 55.0% | |
| ! | CGCAAGGCATTTGACGCAGT+TGG | + | chr2_3:4631350-4631369 | Msa0273100:CDS | 55.0% |
| ! | GGGAGCCTTCGTTTTCTTGC+TGG | - | chr2_3:4631393-4631412 | None:intergenic | 55.0% |
| GCGTGTGCTTAGGATGTGGG+AGG | + | chr2_3:4628482-4628501 | Msa0273100:CDS | 60.0% | |
| ACGGTATGCGCCAACACCAG+GGG | - | chr2_3:4628757-4628776 | None:intergenic | 60.0% | |
| GTACGGTATGCGCCAACACC+AGG | - | chr2_3:4628759-4628778 | None:intergenic | 60.0% | |
| CGGTGTGGGCGCAAACTTCT+TGG | - | chr2_3:4628881-4628900 | None:intergenic | 60.0% | |
| !! | ATGATGGGTGGAGCTGGGGA+AGG | + | chr2_3:4629237-4629256 | Msa0273100:CDS | 60.0% |
| TGGAGCTGGGGAAGGATTGC+CGG | + | chr2_3:4629245-4629264 | Msa0273100:CDS | 60.0% | |
| CTAACGCGAGGACCAAGCGA+AGG | - | chr2_3:4629622-4629641 | None:intergenic | 60.0% | |
| CTTCGCTTGGTCCTCGCGTT+AGG | + | chr2_3:4629620-4629639 | Msa0273100:CDS | 60.0% | |
| GCTGCAGCTCCCGACAGGTC+TGG | - | chr2_3:4631287-4631306 | None:intergenic | 70.0% | |
| CCTGTCGGGAGCTGCAGCTG+CGG | + | chr2_3:4631289-4631308 | Msa0273100:CDS | 70.0% | |
| CCGCAGCTGCAGCTCCCGAC+AGG | - | chr2_3:4631292-4631311 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 4628417 | 4631430 | 4628417 | ID=Msa0273100;Name=Msa0273100 |
| chr2_3 | mRNA | 4628417 | 4631430 | 4628417 | ID=Msa0273100-mRNA-1;Parent=Msa0273100;Name=Msa0273100-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.81|0.9|0.81|11|0|577 |
| chr2_3 | exon | 4628417 | 4628566 | 4628417 | ID=Msa0273100-mRNA-1:exon:2330;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4628654 | 4628921 | 4628654 | ID=Msa0273100-mRNA-1:exon:2331;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4629002 | 4629098 | 4629002 | ID=Msa0273100-mRNA-1:exon:2332;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4629185 | 4629306 | 4629185 | ID=Msa0273100-mRNA-1:exon:2333;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4629395 | 4629479 | 4629395 | ID=Msa0273100-mRNA-1:exon:2334;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4629582 | 4629869 | 4629582 | ID=Msa0273100-mRNA-1:exon:2335;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4629949 | 4630066 | 4629949 | ID=Msa0273100-mRNA-1:exon:2336;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4630169 | 4630350 | 4630169 | ID=Msa0273100-mRNA-1:exon:2337;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4630457 | 4630502 | 4630457 | ID=Msa0273100-mRNA-1:exon:2338;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4630915 | 4631076 | 4630915 | ID=Msa0273100-mRNA-1:exon:2339;Parent=Msa0273100-mRNA-1 |
| chr2_3 | exon | 4631215 | 4631430 | 4631215 | ID=Msa0273100-mRNA-1:exon:2340;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4628417 | 4628566 | 4628417 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4628654 | 4628921 | 4628654 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4629002 | 4629098 | 4629002 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4629185 | 4629306 | 4629185 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4629395 | 4629479 | 4629395 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4629582 | 4629869 | 4629582 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4629949 | 4630066 | 4629949 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4630169 | 4630350 | 4630169 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4630457 | 4630502 | 4630457 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4630915 | 4631076 | 4630915 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| chr2_3 | CDS | 4631215 | 4631430 | 4631215 | ID=Msa0273100-mRNA-1:cds;Parent=Msa0273100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
