Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678930 | GAU50378.1 | 78.947 | 266 | 49 | 3 | 1 | 263 | 61 | 322 | 2.06e-141 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678930 | A0A2Z6P1R9 | 78.947 | 266 | 49 | 3 | 1 | 263 | 61 | 322 | 9.84e-142 | 410 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0678930 | 0.820281 | 7.452377e-53 | -8.615850e-47 |
| Msa0013750 | Msa0678930 | 0.832230 | 1.064263e-55 | -8.615850e-47 |
| Msa0015750 | Msa0678930 | 0.838570 | 2.658479e-57 | -8.615850e-47 |
| Msa0016570 | Msa0678930 | 0.855518 | 5.976923e-62 | -8.615850e-47 |
| Msa0016580 | Msa0678930 | 0.834171 | 3.497033e-56 | -8.615850e-47 |
| Msa0071500 | Msa0678930 | 0.816803 | 4.580802e-52 | -8.615850e-47 |
| Msa0102070 | Msa0678930 | 0.845148 | 4.864272e-59 | -8.615850e-47 |
| Msa0110270 | Msa0678930 | 0.823497 | 1.341751e-53 | -8.615850e-47 |
| Msa0111510 | Msa0678930 | 0.834390 | 3.081558e-56 | -8.615850e-47 |
| Msa0604350 | Msa0678930 | 0.810340 | 1.210354e-50 | -8.615850e-47 |
| Msa0627410 | Msa0678930 | 0.812307 | 4.527714e-51 | -8.615850e-47 |
| Msa0636170 | Msa0678930 | 0.836809 | 7.526821e-57 | -8.615850e-47 |
| Msa0668260 | Msa0678930 | 0.818704 | 1.705558e-52 | -8.615850e-47 |
| Msa0669870 | Msa0678930 | 0.818516 | 1.881614e-52 | -8.615850e-47 |
| Msa0673450 | Msa0678930 | 0.808430 | 3.109752e-50 | -8.615850e-47 |
| Msa0678930 | Msa0688270 | 0.806463 | 8.125100e-50 | -8.615850e-47 |
| Msa0678930 | Msa0694370 | 0.833610 | 4.831262e-56 | -8.615850e-47 |
| Msa0678930 | Msa0697060 | 0.823548 | 1.305780e-53 | -8.615850e-47 |
| Msa0678930 | Msa0725850 | 0.801775 | 7.677590e-49 | -8.615850e-47 |
| Msa0678930 | Msa0726140 | 0.877944 | 4.183732e-69 | -8.615850e-47 |
| Msa0678930 | Msa0728060 | 0.817250 | 3.635515e-52 | -8.615850e-47 |
| Msa0678930 | Msa0729800 | 0.845352 | 4.286001e-59 | -8.615850e-47 |
| Msa0678930 | Msa0732310 | 0.805786 | 1.128324e-49 | -8.615850e-47 |
| Msa0678930 | Msa0733290 | 0.831712 | 1.429114e-55 | -8.615850e-47 |
| Msa0678930 | Msa0736000 | 0.812355 | 4.420648e-51 | -8.615850e-47 |
| Msa0678930 | Msa0741990 | 0.872287 | 3.570511e-67 | -8.615850e-47 |
| Msa0678930 | Msa0743810 | 0.859734 | 3.369041e-63 | -8.615850e-47 |
| Msa0678930 | Msa0745060 | 0.879136 | 1.594098e-69 | -8.615850e-47 |
| Msa0678930 | Msa0764960 | 0.821796 | 3.336740e-53 | -8.615850e-47 |
| Msa0678930 | Msa0766630 | 0.821479 | 3.950490e-53 | -8.615850e-47 |
| Msa0678930 | Msa0767720 | 0.846385 | 2.245853e-59 | -8.615850e-47 |
| Msa0678930 | Msa0777790 | 0.806373 | 8.488053e-50 | -8.615850e-47 |
| Msa0678930 | Msa0783160 | 0.850759 | 1.379939e-60 | -8.615850e-47 |
| Msa0678930 | Msa0787600 | 0.861657 | 8.797543e-64 | -8.615850e-47 |
| Msa0678930 | Msa0789250 | 0.830710 | 2.519452e-55 | -8.615850e-47 |
| Msa0678930 | Msa0804210 | 0.802316 | 5.944150e-49 | -8.615850e-47 |
| Msa0678930 | Msa0808010 | 0.829318 | 5.504092e-55 | -8.615850e-47 |
| Msa0678930 | Msa0808020 | 0.822284 | 2.572694e-53 | -8.615850e-47 |
| Msa0678930 | Msa0811080 | 0.856424 | 3.248265e-62 | -8.615850e-47 |
| Msa0678930 | Msa0825860 | 0.882435 | 1.044253e-70 | -8.615850e-47 |
| Msa0678930 | Msa0826750 | 0.812362 | 4.405597e-51 | -8.615850e-47 |
| Msa0678930 | Msa0833290 | 0.822007 | 2.982770e-53 | -8.615850e-47 |
| Msa0678930 | Msa0846210 | 0.832722 | 8.036313e-56 | -8.615850e-47 |
| Msa0678930 | Msa0846330 | 0.855651 | 5.466917e-62 | -8.615850e-47 |
| Msa0678930 | Msa0846350 | 0.865666 | 5.004040e-65 | -8.615850e-47 |
| Msa0678930 | Msa0848060 | 0.803583 | 3.252073e-49 | -8.615850e-47 |
| Msa0678930 | Msa0848960 | 0.804437 | 2.161296e-49 | -8.615850e-47 |
| Msa0678930 | Msa0858850 | 0.821291 | 4.366046e-53 | -8.615850e-47 |
| Msa0678930 | Msa0865320 | 0.860338 | 2.214563e-63 | -8.615850e-47 |
| Msa0678930 | Msa0872230 | 0.802287 | 6.027176e-49 | -8.615850e-47 |
| Msa0678930 | Msa0885280 | 0.840993 | 6.221708e-58 | -8.615850e-47 |
| Msa0678930 | Msa0885290 | 0.868400 | 6.717192e-66 | -8.615850e-47 |
| Msa0678930 | Msa0886750 | 0.806664 | 7.371125e-50 | -8.615850e-47 |
| Msa0678930 | Msa0887020 | 0.801034 | 1.089017e-48 | -8.615850e-47 |
| Msa0678930 | Msa0887990 | 0.854021 | 1.623779e-61 | -8.615850e-47 |
| Msa0678930 | Msa0888370 | 0.807166 | 5.771478e-50 | -8.615850e-47 |
| Msa0678930 | Msa0888420 | 0.804505 | 2.092248e-49 | -8.615850e-47 |
| Msa0678930 | Msa0890320 | 0.820934 | 5.275593e-53 | -8.615850e-47 |
| Msa0678930 | Msa0896080 | 0.805789 | 1.126357e-49 | -8.615850e-47 |
| Msa0678930 | Msa0901400 | 0.801185 | 1.014446e-48 | -8.615850e-47 |
| Msa0678930 | Msa0907260 | 0.802548 | 5.325496e-49 | -8.615850e-47 |
| Msa0678930 | Msa0922720 | 0.843255 | 1.567754e-58 | -8.615850e-47 |
| Msa0678930 | Msa0935910 | 0.812127 | 4.957193e-51 | -8.615850e-47 |
| Msa0678930 | Msa0954910 | 0.841474 | 4.647969e-58 | -8.615850e-47 |
| Msa0678930 | Msa0956270 | 0.807299 | 5.409804e-50 | -8.615850e-47 |
| Msa0678930 | Msa0957680 | 0.835500 | 1.618101e-56 | -8.615850e-47 |
| Msa0678930 | Msa0959770 | 0.800115 | 1.676832e-48 | -8.615850e-47 |
| Msa0678930 | Msa0969260 | 0.819001 | 1.460487e-52 | -8.615850e-47 |
| Msa0678930 | Msa0979410 | 0.804690 | 1.913475e-49 | -8.615850e-47 |
| Msa0678930 | Msa0981370 | 0.868466 | 6.394724e-66 | -8.615850e-47 |
| Msa0678930 | Msa0989060 | 0.812141 | 4.923286e-51 | -8.615850e-47 |
| Msa0678930 | Msa1014540 | 0.805779 | 1.131958e-49 | -8.615850e-47 |
| Msa0678930 | Msa1016280 | 0.868173 | 7.949979e-66 | -8.615850e-47 |
| Msa0678930 | Msa1024240 | 0.886139 | 4.435939e-72 | -8.615850e-47 |
| Msa0678930 | Msa1025360 | 0.861560 | 9.415177e-64 | -8.615850e-47 |
| Msa0678930 | Msa1025370 | 0.848615 | 5.475964e-60 | -8.615850e-47 |
| Msa0678930 | Msa1030060 | 0.805067 | 1.596395e-49 | -8.615850e-47 |
| Msa0678930 | Msa1037200 | 0.823339 | 1.460924e-53 | -8.615850e-47 |
| Msa0678930 | Msa1044830 | 0.855259 | 7.110803e-62 | -8.615850e-47 |
| Msa0678930 | Msa1044840 | 0.859617 | 3.653975e-63 | -8.615850e-47 |
| Msa0678930 | Msa1054790 | 0.802033 | 6.797267e-49 | -8.615850e-47 |
| Msa0678930 | Msa1060840 | 0.813118 | 3.008929e-51 | -8.615850e-47 |
| Msa0678930 | Msa1062810 | 0.815249 | 1.018421e-51 | -8.615850e-47 |
| Msa0678930 | Msa1077460 | 0.841765 | 3.896711e-58 | -8.615850e-47 |
| Msa0678930 | Msa1077870 | 0.823767 | 1.159840e-53 | -8.615850e-47 |
| Msa0678930 | Msa1079180 | 0.813355 | 2.669328e-51 | -8.615850e-47 |
| Msa0678930 | Msa1084240 | 0.827943 | 1.183482e-54 | -8.615850e-47 |
| Msa0678930 | Msa1092990 | 0.853488 | 2.311495e-61 | -8.615850e-47 |
| Msa0678930 | Msa1096580 | 0.834213 | 3.413354e-56 | -8.615850e-47 |
| Msa0678930 | Msa1100980 | 0.881193 | 2.940982e-70 | -8.615850e-47 |
| Msa0678930 | Msa1109440 | 0.859915 | 2.972704e-63 | -8.615850e-47 |
| Msa0678930 | Msa1117150 | 0.804884 | 1.743222e-49 | -8.615850e-47 |
| Msa0678930 | Msa1121200 | 0.854665 | 1.058263e-61 | -8.615850e-47 |
| Msa0678930 | Msa1135740 | 0.873197 | 1.771504e-67 | -8.615850e-47 |
| Msa0678930 | Msa1136090 | 0.846193 | 2.533237e-59 | -8.615850e-47 |
| Msa0678930 | Msa1137690 | 0.802402 | 5.706102e-49 | -8.615850e-47 |
| Msa0678930 | Msa1146110 | 0.873044 | 1.994350e-67 | -8.615850e-47 |
| Msa0678930 | Msa1149360 | 0.818613 | 1.789204e-52 | -8.615850e-47 |
| Msa0678930 | Msa1150370 | 0.821254 | 4.451908e-53 | -8.615850e-47 |
| Msa0678930 | Msa1160670 | 0.836487 | 9.092946e-57 | -8.615850e-47 |
| Msa0678930 | Msa1160690 | 0.810693 | 1.015297e-50 | -8.615850e-47 |
| Msa0678930 | Msa1164120 | 0.833050 | 6.663587e-56 | -8.615850e-47 |
| Msa0678930 | Msa1173920 | 0.812538 | 4.031382e-51 | -8.615850e-47 |
| Msa0678930 | Msa1178720 | 0.820325 | 7.280224e-53 | -8.615850e-47 |
| Msa0678930 | Msa1187940 | 0.879570 | 1.118657e-69 | -8.615850e-47 |
| Msa0678930 | Msa1187950 | 0.872268 | 3.624790e-67 | -8.615850e-47 |
| Msa0678930 | Msa1192640 | 0.885832 | 5.786436e-72 | -8.615850e-47 |
| Msa0678930 | Msa1193730 | 0.803863 | 2.845350e-49 | -8.615850e-47 |
| Msa0678930 | Msa1251910 | 0.817834 | 2.684555e-52 | -8.615850e-47 |
| Msa0678930 | Msa1253000 | 0.836154 | 1.104701e-56 | -8.615850e-47 |
| Msa0678930 | Msa1260100 | 0.835977 | 1.225568e-56 | -8.615850e-47 |
| Msa0678930 | Msa1269670 | 0.878526 | 2.615890e-69 | -8.615850e-47 |
| Msa0678930 | Msa1270230 | 0.854188 | 1.453585e-61 | -8.615850e-47 |
| Msa0678930 | Msa1270240 | 0.863137 | 3.085041e-64 | -8.615850e-47 |
| Msa0678930 | Msa1270270 | 0.839633 | 1.410379e-57 | -8.615850e-47 |
| Msa0678930 | Msa1278110 | 0.800686 | 1.282733e-48 | -8.615850e-47 |
| Msa0678930 | Msa1283330 | 0.854483 | 1.194406e-61 | -8.615850e-47 |
| Msa0678930 | Msa1285930 | 0.888472 | 5.728878e-73 | -8.615850e-47 |
| Msa0678930 | Msa1287800 | 0.862587 | 4.561048e-64 | -8.615850e-47 |
| Msa0678930 | Msa1287810 | 0.876169 | 1.728955e-68 | -8.615850e-47 |
| Msa0678930 | Msa1287820 | 0.824481 | 7.885773e-54 | -8.615850e-47 |
| Msa0678930 | Msa1287830 | 0.818134 | 2.297086e-52 | -8.615850e-47 |
| Msa0678930 | Msa1289430 | 0.817942 | 2.537851e-52 | -8.615850e-47 |
| Msa0678930 | Msa1297210 | 0.852999 | 3.192841e-61 | -8.615850e-47 |
| Msa0678930 | Msa1305480 | 0.804598 | 2.000539e-49 | -8.615850e-47 |
| Msa0678930 | Msa1307890 | 0.841102 | 5.822495e-58 | -8.615850e-47 |
| Msa0678930 | Msa1313980 | 0.803731 | 3.030765e-49 | -8.615850e-47 |
| Msa0678930 | Msa1314280 | 0.832167 | 1.103196e-55 | -8.615850e-47 |
| Msa0678930 | Msa1320300 | 0.808815 | 2.572839e-50 | -8.615850e-47 |
| Msa0678930 | Msa1340590 | 0.831873 | 1.304363e-55 | -8.615850e-47 |
| Msa0678930 | Msa1342200 | 0.809838 | 1.552493e-50 | -8.615850e-47 |
| Msa0678930 | Msa1342840 | 0.806039 | 9.983976e-50 | -8.615850e-47 |
| Msa0678930 | Msa1382690 | 0.815933 | 7.170162e-52 | -8.615850e-47 |
| Msa0678930 | Msa1382700 | 0.809547 | 1.793207e-50 | -8.615850e-47 |
| Msa0678930 | Msa1397580 | 0.826570 | 2.523839e-54 | -8.615850e-47 |
| Msa0678930 | Msa1397860 | 0.802448 | 5.583900e-49 | -8.615850e-47 |
| Msa0678930 | Msa1404000 | 0.857115 | 2.033127e-62 | -8.615850e-47 |
| Msa0678930 | Msa1408780 | 0.804844 | 1.777663e-49 | -8.615850e-47 |
| Msa0678930 | Msa1415310 | 0.830783 | 2.418230e-55 | -8.615850e-47 |
| Msa0678930 | Msa1422180 | 0.839496 | 1.530567e-57 | -8.615850e-47 |
| Msa0678930 | Msa1433120 | 0.867541 | 1.267992e-65 | -8.615850e-47 |
| Msa0678930 | Msa1438250 | 0.857828 | 1.250817e-62 | -8.615850e-47 |
| Msa0678930 | Msa1451570 | 0.848452 | 6.075351e-60 | -8.615850e-47 |
| Msa0131770 | Msa0678930 | 0.802559 | 5.296937e-49 | -8.615850e-47 |
| Msa0142220 | Msa0678930 | 0.873791 | 1.118172e-67 | -8.615850e-47 |
| Msa0145750 | Msa0678930 | 0.812822 | 3.494190e-51 | -8.615850e-47 |
| Msa0153910 | Msa0678930 | 0.884607 | 1.659735e-71 | -8.615850e-47 |
| Msa0159720 | Msa0678930 | 0.816916 | 4.321498e-52 | -8.615850e-47 |
| Msa0165190 | Msa0678930 | 0.816094 | 6.603116e-52 | -8.615850e-47 |
| Msa0199240 | Msa0678930 | 0.800781 | 1.226905e-48 | -8.615850e-47 |
| Msa0200000 | Msa0678930 | 0.814319 | 1.636951e-51 | -8.615850e-47 |
| Msa0214370 | Msa0678930 | 0.844448 | 7.513454e-59 | -8.615850e-47 |
| Msa0214380 | Msa0678930 | 0.850778 | 1.362893e-60 | -8.615850e-47 |
| Msa0227480 | Msa0678930 | 0.837472 | 5.093156e-57 | -8.615850e-47 |
| Msa0231000 | Msa0678930 | 0.801535 | 8.602729e-49 | -8.615850e-47 |
| Msa0232850 | Msa0678930 | 0.811682 | 6.196848e-51 | -8.615850e-47 |
| Msa0235140 | Msa0678930 | 0.817284 | 3.570942e-52 | -8.615850e-47 |
| Msa0236250 | Msa0678930 | 0.805730 | 1.159510e-49 | -8.615850e-47 |
| Msa0365500 | Msa0678930 | 0.835972 | 1.229256e-56 | -8.615850e-47 |
| Msa0366580 | Msa0678930 | 0.807138 | 5.851602e-50 | -8.615850e-47 |
| Msa0371730 | Msa0678930 | 0.806822 | 6.826152e-50 | -8.615850e-47 |
| Msa0384800 | Msa0678930 | 0.847314 | 1.250819e-59 | -8.615850e-47 |
| Msa0394970 | Msa0678930 | 0.838597 | 2.617018e-57 | -8.615850e-47 |
| Msa0396600 | Msa0678930 | 0.809995 | 1.436542e-50 | -8.615850e-47 |
| Msa0402290 | Msa0678930 | 0.801007 | 1.102933e-48 | -8.615850e-47 |
| Msa0406120 | Msa0678930 | 0.861098 | 1.301940e-63 | -8.615850e-47 |
| Msa0407750 | Msa0678930 | 0.845480 | 3.957024e-59 | -8.615850e-47 |
| Msa0414410 | Msa0678930 | 0.847196 | 1.347705e-59 | -8.615850e-47 |
| Msa0414420 | Msa0678930 | 0.862167 | 6.136390e-64 | -8.615850e-47 |
| Msa0423020 | Msa0678930 | 0.800310 | 1.530464e-48 | -8.615850e-47 |
| Msa0431690 | Msa0678930 | 0.800352 | 1.500624e-48 | -8.615850e-47 |
| Msa0432290 | Msa0678930 | 0.807664 | 4.525125e-50 | -8.615850e-47 |
| Msa0436780 | Msa0678930 | 0.837214 | 5.930847e-57 | -8.615850e-47 |
| Msa0436800 | Msa0678930 | 0.858660 | 7.072916e-63 | -8.615850e-47 |
| Msa0437990 | Msa0678930 | 0.821805 | 3.322065e-53 | -8.615850e-47 |
| Msa0438620 | Msa0678930 | 0.850315 | 1.838544e-60 | -8.615850e-47 |
| Msa0450000 | Msa0678930 | 0.805887 | 1.074573e-49 | -8.615850e-47 |
| Msa0450570 | Msa0678930 | 0.808809 | 2.580695e-50 | -8.615850e-47 |
| Msa0452620 | Msa0678930 | 0.812197 | 4.785737e-51 | -8.615850e-47 |
| Msa0452900 | Msa0678930 | 0.876128 | 1.786645e-68 | -8.615850e-47 |
| Msa0453120 | Msa0678930 | 0.852454 | 4.566803e-61 | -8.615850e-47 |
| Msa0454910 | Msa0678930 | 0.817506 | 3.182959e-52 | -8.615850e-47 |
| Msa0456200 | Msa0678930 | 0.819010 | 1.453490e-52 | -8.615850e-47 |
| Msa0459160 | Msa0678930 | 0.823355 | 1.448057e-53 | -8.615850e-47 |
| Msa0459170 | Msa0678930 | 0.800688 | 1.281543e-48 | -8.615850e-47 |
| Msa0482620 | Msa0678930 | 0.827786 | 1.290733e-54 | -8.615850e-47 |
| Msa0267000 | Msa0678930 | 0.850613 | 1.516610e-60 | -8.615850e-47 |
| Msa0267010 | Msa0678930 | 0.857477 | 1.589790e-62 | -8.615850e-47 |
| Msa0270520 | Msa0678930 | 0.835847 | 1.322096e-56 | -8.615850e-47 |
| Msa0273100 | Msa0678930 | 0.819162 | 1.342155e-52 | -8.615850e-47 |
| Msa0290870 | Msa0678930 | 0.810660 | 1.031896e-50 | -8.615850e-47 |
| Msa0294030 | Msa0678930 | 0.811008 | 8.680181e-51 | -8.615850e-47 |
| Msa0304170 | Msa0678930 | 0.837085 | 6.399084e-57 | -8.615850e-47 |
| Msa0306460 | Msa0678930 | 0.830490 | 2.851698e-55 | -8.615850e-47 |
| Msa0309020 | Msa0678930 | 0.822769 | 1.983892e-53 | -8.615850e-47 |
| Msa0313760 | Msa0678930 | 0.842948 | 1.892602e-58 | -8.615850e-47 |
| Msa0326200 | Msa0678930 | 0.837450 | 5.160134e-57 | -8.615850e-47 |
| Msa0329190 | Msa0678930 | 0.807428 | 5.080089e-50 | -8.615850e-47 |
| Msa0337900 | Msa0678930 | 0.810123 | 1.347840e-50 | -8.615850e-47 |
| Msa0342240 | Msa0678930 | 0.863584 | 2.243225e-64 | -8.615850e-47 |
| Msa0353190 | Msa0678930 | 0.815389 | 9.478303e-52 | -8.615850e-47 |
| Msa0357340 | Msa0678930 | 0.804191 | 2.431719e-49 | -8.615850e-47 |
| Msa0360510 | Msa0678930 | 0.859915 | 2.972704e-63 | -8.615850e-47 |
| Msa0362420 | Msa0678930 | 0.806970 | 6.349130e-50 | -8.615850e-47 |
| Msa0363300 | Msa0678930 | 0.832469 | 9.287019e-56 | -8.615850e-47 |
| Msa0485370 | Msa0678930 | 0.811121 | 8.202152e-51 | -8.615850e-47 |
| Msa0491590 | Msa0678930 | 0.841279 | 5.231008e-58 | -8.615850e-47 |
| Msa0492430 | Msa0678930 | 0.810536 | 1.098042e-50 | -8.615850e-47 |
| Msa0506270 | Msa0678930 | 0.810416 | 1.165107e-50 | -8.615850e-47 |
| Msa0537500 | Msa0678930 | 0.824258 | 8.897825e-54 | -8.615850e-47 |
| Msa0542450 | Msa0678930 | 0.802915 | 4.472145e-49 | -8.615850e-47 |
| Msa0545200 | Msa0678930 | 0.806908 | 6.546015e-50 | -8.615850e-47 |
| Msa0564890 | Msa0678930 | 0.870629 | 1.262895e-66 | -8.615850e-47 |
| Msa0589780 | Msa0678930 | 0.821748 | 3.423944e-53 | -8.615850e-47 |
| Msa0592680 | Msa0678930 | 0.809371 | 1.956311e-50 | -8.615850e-47 |
| Msa0596150 | Msa0678930 | 0.802449 | 5.582105e-49 | -8.615850e-47 |
| Msa0600700 | Msa0678930 | 0.834591 | 2.743277e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678930 | MtrunA17_Chr8g0338951 | 48.148 | 270 | 124 | 4 | 1 | 258 | 57 | 322 | 3.36e-83 | 252 |
| Msa0678930 | MtrunA17_Chr8g0373261 | 51.145 | 262 | 118 | 5 | 1 | 261 | 678 | 930 | 1.02e-82 | 267 |
| Msa0678930 | MtrunA17_Chr2g0278781 | 51.648 | 182 | 85 | 2 | 39 | 218 | 1 | 181 | 2.53e-65 | 202 |
| Msa0678930 | MtrunA17_Chr6g0480081 | 49.390 | 164 | 82 | 1 | 86 | 248 | 7 | 170 | 1.23e-52 | 172 |
| Msa0678930 | MtrunA17_Chr5g0404701 | 48.630 | 146 | 70 | 2 | 1 | 146 | 48 | 188 | 2.79e-48 | 159 |
| Msa0678930 | MtrunA17_Chr6g0455001 | 35.391 | 243 | 134 | 5 | 1 | 224 | 185 | 423 | 1.19e-42 | 150 |
| Msa0678930 | MtrunA17_Chr6g0462901 | 37.443 | 219 | 134 | 3 | 1 | 217 | 779 | 996 | 3.88e-40 | 147 |
| Msa0678930 | MtrunA17_Chr6g0477921 | 35.849 | 212 | 132 | 2 | 1 | 212 | 693 | 900 | 1.53e-38 | 143 |
| Msa0678930 | MtrunA17_Chr6g0477881 | 35.849 | 212 | 132 | 2 | 1 | 212 | 693 | 900 | 1.58e-38 | 143 |
| Msa0678930 | MtrunA17_Chr2g0281381 | 35.981 | 214 | 135 | 1 | 1 | 212 | 735 | 948 | 1.62e-37 | 140 |
| Msa0678930 | MtrunA17_Chr3g0081981 | 30.970 | 268 | 181 | 4 | 1 | 265 | 336 | 602 | 2.03e-37 | 139 |
| Msa0678930 | MtrunA17_Chr4g0018901 | 44.961 | 129 | 70 | 1 | 84 | 212 | 244 | 371 | 1.03e-30 | 120 |
| Msa0678930 | MtrunA17_Chr1g0211111 | 31.980 | 197 | 131 | 2 | 20 | 215 | 1 | 195 | 1.47e-30 | 119 |
| Msa0678930 | MtrunA17_Chr4g0049281 | 25.339 | 221 | 148 | 3 | 3 | 217 | 368 | 577 | 7.31e-17 | 80.1 |
| Msa0678930 | MtrunA17_Chr1g0190521 | 25.339 | 221 | 144 | 3 | 1 | 211 | 555 | 764 | 1.52e-16 | 79.3 |
| Msa0678930 | MtrunA17_Chr1g0190511 | 25.112 | 223 | 146 | 3 | 1 | 213 | 450 | 661 | 7.26e-16 | 77.0 |
| Msa0678930 | MtrunA17_Chr4g0069321 | 24.766 | 214 | 143 | 6 | 3 | 212 | 549 | 748 | 1.10e-12 | 67.8 |
| Msa0678930 | MtrunA17_Chr1g0193171 | 25.346 | 217 | 139 | 6 | 3 | 214 | 548 | 746 | 1.35e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACACTGCCATTACAAAATA+AGG | 0.162976 | 4_4:-35839157 | None:intergenic |
| GGACTTGCGCTTGCAGAAAA+TGG | 0.168021 | 4_4:+35838427 | Msa0678930:CDS |
| ATCAAATCGTTAGATAATTT+TGG | 0.195367 | 4_4:+35839106 | Msa0678930:exon |
| ATTATGTTGCTTCATATTAC+AGG | 0.254849 | 4_4:+35838517 | Msa0678930:CDS |
| ATTGACTCACTATCTATAAT+AGG | 0.264633 | 4_4:-35838679 | None:intergenic |
| TCGAGCAATAGTTGGATCTT+TGG | 0.282974 | 4_4:-35838288 | None:intergenic |
| TCCCATTCTCTACATGAAAA+AGG | 0.296566 | 4_4:-35838374 | None:intergenic |
| GTTACCTTATTTCCACCTTT+AGG | 0.355704 | 4_4:-35838886 | None:intergenic |
| GATGCCTAAAGGTGGAAATA+AGG | 0.378831 | 4_4:+35838882 | Msa0678930:CDS |
| TTTGTCACGGATATCCAATA+TGG | 0.390008 | 4_4:-35838169 | None:intergenic |
| CTTCAAATGGTCCAAAGCTT+TGG | 0.390940 | 4_4:+35838656 | Msa0678930:CDS |
| GACTTGCGCTTGCAGAAAAT+GGG | 0.393272 | 4_4:+35838428 | Msa0678930:CDS |
| ATGTGAAAATCAAGGCCTAA+TGG | 0.406830 | 4_4:+35839284 | Msa0678930:three_prime_UTR |
| AGCATTCAACAAAACCATAT+TGG | 0.419572 | 4_4:+35838155 | Msa0678930:CDS |
| CCACCCATCTGCTACCCTCT+TGG | 0.423746 | 4_4:-35838316 | None:intergenic |
| CATAATCCTCTGGAACTTCA+TGG | 0.424821 | 4_4:-35838500 | None:intergenic |
| AGATGGGTGGTCTCCACATT+GGG | 0.431191 | 4_4:+35838329 | Msa0678930:CDS |
| CCCTCAAGCAATGTGATGAT+AGG | 0.452056 | 4_4:-35838192 | None:intergenic |
| GCATAATCATTCAGACCATT+AGG | 0.453396 | 4_4:-35839299 | None:intergenic |
| CAAAGCTTTGGACCATTTGA+AGG | 0.464230 | 4_4:-35838655 | None:intergenic |
| TTCACAGTTGGAAAGTCCCT+TGG | 0.464261 | 4_4:-35838790 | None:intergenic |
| CCTATCATCACATTGCTTGA+GGG | 0.464361 | 4_4:+35838192 | Msa0678930:CDS |
| ACACTGCCATTACAAAATAA+GGG | 0.474224 | 4_4:-35839156 | None:intergenic |
| TCTATAATAGGCCAAAGCTT+TGG | 0.475164 | 4_4:-35838667 | None:intergenic |
| TTTGCTTATACCTTATGACT+TGG | 0.483870 | 4_4:+35839213 | Msa0678930:three_prime_UTR |
| TTGCTTATACCTTATGACTT+GGG | 0.488028 | 4_4:+35839214 | Msa0678930:three_prime_UTR |
| GATCCAACTATTGCTCGAAA+AGG | 0.489959 | 4_4:+35838293 | Msa0678930:CDS |
| CAGATGGGTGGTCTCCACAT+TGG | 0.494781 | 4_4:+35838328 | Msa0678930:CDS |
| GGGTGGTCTCCACATTGGGC+TGG | 0.496501 | 4_4:+35838333 | Msa0678930:CDS |
| CACATCATCATACCTTCAAA+TGG | 0.499309 | 4_4:+35838643 | Msa0678930:CDS |
| ACCTATCATCACATTGCTTG+AGG | 0.523184 | 4_4:+35838191 | Msa0678930:CDS |
| TATGAAGCAACATAATCCTC+TGG | 0.523306 | 4_4:-35838510 | None:intergenic |
| ATGCTGTCGATTTACACAAA+AGG | 0.524315 | 4_4:+35838406 | Msa0678930:CDS |
| GCTTGTGATCCTCGAGGTTG+AGG | 0.527688 | 4_4:-35839083 | None:intergenic |
| GTAATGATACCCAAGTCATA+AGG | 0.533341 | 4_4:-35839223 | None:intergenic |
| GCTTGTGATCCTCGAGGTTG+AGG | 0.534413 | 4_4:-35839059 | None:intergenic |
| AGAATCCTAAAATACTTCCA+AGG | 0.537938 | 4_4:+35838773 | Msa0678930:CDS |
| GAACTGATGCGAAGGTATGC+GGG | 0.543109 | 4_4:+35838255 | Msa0678930:CDS |
| TGCAGAAAATGGGATTTGAC+TGG | 0.550368 | 4_4:+35838438 | Msa0678930:CDS |
| GCAGATAGAGCGATGCCTAA+AGG | 0.555906 | 4_4:+35838871 | Msa0678930:CDS |
| CTAGGTATGAGAAGAGCGCC+AGG | 0.558805 | 4_4:+35838709 | Msa0678930:CDS |
| GCCACATGAAGGCAATGCTA+TGG | 0.565635 | 4_4:-35838473 | None:intergenic |
| AGCGACTAATGTGAAAATCA+AGG | 0.570991 | 4_4:+35839276 | Msa0678930:three_prime_UTR |
| GAAGTCACAAAAGAAGTCAC+AGG | 0.580652 | 4_4:+35839016 | Msa0678930:CDS |
| TTCATGGTTATGCCACATGA+AGG | 0.582260 | 4_4:-35838484 | None:intergenic |
| GGCGCTCTTCTCATACCTAG+TGG | 0.583713 | 4_4:-35838706 | None:intergenic |
| TGAACTGATGCGAAGGTATG+CGG | 0.586505 | 4_4:+35838254 | Msa0678930:CDS |
| GCCATAGCATTGCCTTCATG+TGG | 0.590586 | 4_4:+35838472 | Msa0678930:CDS |
| AGGCCAAGAGGGTAGCAGAT+GGG | 0.594260 | 4_4:+35838313 | Msa0678930:CDS |
| GAATCCTAAAATACTTCCAA+GGG | 0.595111 | 4_4:+35838774 | Msa0678930:CDS |
| CTCAAAGTGAACTGATGCGA+AGG | 0.600463 | 4_4:+35838247 | Msa0678930:CDS |
| CACAATGTGAGGACTTGCAA+GGG | 0.605462 | 4_4:+35838838 | Msa0678930:CDS |
| AAGGCCAAGAGGGTAGCAGA+TGG | 0.614984 | 4_4:+35838312 | Msa0678930:CDS |
| GCTGGTGATCTAGAGCATCA+TGG | 0.615404 | 4_4:+35838351 | Msa0678930:CDS |
| TCACAATGTGAGGACTTGCA+AGG | 0.617216 | 4_4:+35838837 | Msa0678930:CDS |
| TCACAAAAGAAGTCACAGGC+TGG | 0.619813 | 4_4:+35839020 | Msa0678930:CDS |
| ATGTGATGATAGGTTTGTCA+CGG | 0.622552 | 4_4:-35838182 | None:intergenic |
| ATTGCTCGAAAAGGCCAAGA+GGG | 0.626205 | 4_4:+35838302 | Msa0678930:CDS |
| GATAGAGCGATGCCTAAAGG+TGG | 0.657666 | 4_4:+35838874 | Msa0678930:CDS |
| GAAAGTTTGGTCACAATGTG+AGG | 0.661716 | 4_4:+35838827 | Msa0678930:CDS |
| AGTGAGTCAATAAATCCACT+AGG | 0.666435 | 4_4:+35838691 | Msa0678930:CDS |
| GCATAACCATGAAGTTCCAG+AGG | 0.667930 | 4_4:+35838494 | Msa0678930:CDS |
| TATTGCTCGAAAAGGCCAAG+AGG | 0.675257 | 4_4:+35838301 | Msa0678930:CDS |
| CCAAGAGGGTAGCAGATGGG+TGG | 0.676519 | 4_4:+35838316 | Msa0678930:CDS |
| GACTTGCAAGGGTAAAACAA+CGG | 0.680575 | 4_4:+35838849 | Msa0678930:CDS |
| AAGGCAATGCTATGGCAACA+CGG | 0.681342 | 4_4:-35838465 | None:intergenic |
| TTTGATGCTTGTGATCCTCG+AGG | 0.710766 | 4_4:-35839089 | None:intergenic |
| TCACAAGCACCTCAACCTCG+AGG | 0.713519 | 4_4:+35839074 | Msa0678930:CDS |
| TCACAAGCACCTCAACCTCG+AGG | 0.713929 | 4_4:+35839050 | Msa0678930:CDS |
| TCTAGATCACCAGCCCAATG+TGG | 0.729014 | 4_4:-35838342 | None:intergenic |
| TGAGGTGCTTGTGATCCTCG+AGG | 0.734963 | 4_4:-35839065 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATTATATTTCAAAA+AGG | + | chr4_4:35838217-35838236 | Msa0678930:CDS | 10.0% |
| !! | TGAAAAATTATATTTCAAAA+AGG | + | chr4_4:35838217-35838236 | Msa0678930:CDS | 10.0% |
| !! | TTAATTTCATCAATTCATAT+AGG | + | chr4_4:35838593-35838612 | Msa0678930:intron | 15.0% |
| !! | TTAATTTCATCAATTCATAT+AGG | + | chr4_4:35838593-35838612 | Msa0678930:intron | 15.0% |
| !!! | ATCAAATCGTTAGATAATTT+TGG | + | chr4_4:35839106-35839125 | Msa0678930:exon | 20.0% |
| !! | ATGCTAAAAGTTTCAAAAAT+AGG | - | chr4_4:35839186-35839205 | None:intergenic | 20.0% |
| !!! | TTTTGAAACTTTTAGCATTA+TGG | + | chr4_4:35839188-35839207 | Msa0678930:three_prime_UTR | 20.0% |
| !!! | ATCAAATCGTTAGATAATTT+TGG | + | chr4_4:35839106-35839125 | Msa0678930:exon | 20.0% |
| !! | ATGCTAAAAGTTTCAAAAAT+AGG | - | chr4_4:35839186-35839205 | None:intergenic | 20.0% |
| !!! | TTTTGAAACTTTTAGCATTA+TGG | + | chr4_4:35839188-35839207 | Msa0678930:three_prime_UTR | 20.0% |
| !! | ATTATGTTGCTTCATATTAC+AGG | + | chr4_4:35838517-35838536 | Msa0678930:CDS | 25.0% |
| !! | ATTGACTCACTATCTATAAT+AGG | - | chr4_4:35838682-35838701 | None:intergenic | 25.0% |
| !!! | CTCTTGTTTCTTTGTTTTTT+GGG | - | chr4_4:35838739-35838758 | None:intergenic | 25.0% |
| !!! | ACTCTTGTTTCTTTGTTTTT+TGG | - | chr4_4:35838740-35838759 | None:intergenic | 25.0% |
| ! | TGATACATATTCTAACTGTA+CGG | + | chr4_4:35838909-35838928 | Msa0678930:intron | 25.0% |
| !!! | TGATATCCCTTATTTTGTAA+TGG | + | chr4_4:35839150-35839169 | Msa0678930:three_prime_UTR | 25.0% |
| !! | ATTATGTTGCTTCATATTAC+AGG | + | chr4_4:35838517-35838536 | Msa0678930:CDS | 25.0% |
| !! | ATTGACTCACTATCTATAAT+AGG | - | chr4_4:35838682-35838701 | None:intergenic | 25.0% |
| !!! | CTCTTGTTTCTTTGTTTTTT+GGG | - | chr4_4:35838739-35838758 | None:intergenic | 25.0% |
| !!! | ACTCTTGTTTCTTTGTTTTT+TGG | - | chr4_4:35838740-35838759 | None:intergenic | 25.0% |
| ! | TGATACATATTCTAACTGTA+CGG | + | chr4_4:35838909-35838928 | Msa0678930:intron | 25.0% |
| !!! | TGATATCCCTTATTTTGTAA+TGG | + | chr4_4:35839150-35839169 | Msa0678930:three_prime_UTR | 25.0% |
| AGCATTCAACAAAACCATAT+TGG | + | chr4_4:35838155-35838174 | Msa0678930:CDS | 30.0% | |
| !!! | GGAAGTATTTTAGGATTCTT+CGG | - | chr4_4:35838772-35838791 | None:intergenic | 30.0% |
| AGAATCCTAAAATACTTCCA+AGG | + | chr4_4:35838773-35838792 | Msa0678930:CDS | 30.0% | |
| GAATCCTAAAATACTTCCAA+GGG | + | chr4_4:35838774-35838793 | Msa0678930:CDS | 30.0% | |
| ! | CAATTTTTGCATTTCACAGT+TGG | - | chr4_4:35838805-35838824 | None:intergenic | 30.0% |
| ACTGTGAAATGCAAAAATTG+TGG | + | chr4_4:35838805-35838824 | Msa0678930:CDS | 30.0% | |
| TGCAAAAATTGTGGAAAGTT+TGG | + | chr4_4:35838814-35838833 | Msa0678930:CDS | 30.0% | |
| ACACTGCCATTACAAAATAA+GGG | - | chr4_4:35839159-35839178 | None:intergenic | 30.0% | |
| AACACTGCCATTACAAAATA+AGG | - | chr4_4:35839160-35839179 | None:intergenic | 30.0% | |
| TTTGCTTATACCTTATGACT+TGG | + | chr4_4:35839213-35839232 | Msa0678930:three_prime_UTR | 30.0% | |
| TTGCTTATACCTTATGACTT+GGG | + | chr4_4:35839214-35839233 | Msa0678930:three_prime_UTR | 30.0% | |
| AGCATTCAACAAAACCATAT+TGG | + | chr4_4:35838155-35838174 | Msa0678930:CDS | 30.0% | |
| !!! | GGAAGTATTTTAGGATTCTT+CGG | - | chr4_4:35838772-35838791 | None:intergenic | 30.0% |
| AGAATCCTAAAATACTTCCA+AGG | + | chr4_4:35838773-35838792 | Msa0678930:CDS | 30.0% | |
| GAATCCTAAAATACTTCCAA+GGG | + | chr4_4:35838774-35838793 | Msa0678930:CDS | 30.0% | |
| ! | CAATTTTTGCATTTCACAGT+TGG | - | chr4_4:35838805-35838824 | None:intergenic | 30.0% |
| ACTGTGAAATGCAAAAATTG+TGG | + | chr4_4:35838805-35838824 | Msa0678930:CDS | 30.0% | |
| TGCAAAAATTGTGGAAAGTT+TGG | + | chr4_4:35838814-35838833 | Msa0678930:CDS | 30.0% | |
| ACACTGCCATTACAAAATAA+GGG | - | chr4_4:35839159-35839178 | None:intergenic | 30.0% | |
| AACACTGCCATTACAAAATA+AGG | - | chr4_4:35839160-35839179 | None:intergenic | 30.0% | |
| TTTGCTTATACCTTATGACT+TGG | + | chr4_4:35839213-35839232 | Msa0678930:three_prime_UTR | 30.0% | |
| TTGCTTATACCTTATGACTT+GGG | + | chr4_4:35839214-35839233 | Msa0678930:three_prime_UTR | 30.0% | |
| TTTGTCACGGATATCCAATA+TGG | - | chr4_4:35838172-35838191 | None:intergenic | 35.0% | |
| ATGTGATGATAGGTTTGTCA+CGG | - | chr4_4:35838185-35838204 | None:intergenic | 35.0% | |
| !! | GCCTTTTTCATGTAGAGAAT+GGG | + | chr4_4:35838373-35838392 | Msa0678930:CDS | 35.0% |
| TCCCATTCTCTACATGAAAA+AGG | - | chr4_4:35838377-35838396 | None:intergenic | 35.0% | |
| !! | ATGCTGTCGATTTACACAAA+AGG | + | chr4_4:35838406-35838425 | Msa0678930:CDS | 35.0% |
| TATGAAGCAACATAATCCTC+TGG | - | chr4_4:35838513-35838532 | None:intergenic | 35.0% | |
| CACATCATCATACCTTCAAA+TGG | + | chr4_4:35838643-35838662 | Msa0678930:CDS | 35.0% | |
| TCTATAATAGGCCAAAGCTT+TGG | - | chr4_4:35838670-35838689 | None:intergenic | 35.0% | |
| AGTGAGTCAATAAATCCACT+AGG | + | chr4_4:35838691-35838710 | Msa0678930:CDS | 35.0% | |
| !!! | CTTTGTTTTTTGGGTTTTCC+TGG | - | chr4_4:35838730-35838749 | None:intergenic | 35.0% |
| !!! | AAGTCCCTTGGAAGTATTTT+AGG | - | chr4_4:35838781-35838800 | None:intergenic | 35.0% |
| ! | GTTACCTTATTTCCACCTTT+AGG | - | chr4_4:35838889-35838908 | None:intergenic | 35.0% |
| GTAATGATACCCAAGTCATA+AGG | - | chr4_4:35839226-35839245 | None:intergenic | 35.0% | |
| AGCGACTAATGTGAAAATCA+AGG | + | chr4_4:35839276-35839295 | Msa0678930:three_prime_UTR | 35.0% | |
| ATGTGAAAATCAAGGCCTAA+TGG | + | chr4_4:35839284-35839303 | Msa0678930:three_prime_UTR | 35.0% | |
| GCATAATCATTCAGACCATT+AGG | - | chr4_4:35839302-35839321 | None:intergenic | 35.0% | |
| TTTGTCACGGATATCCAATA+TGG | - | chr4_4:35838172-35838191 | None:intergenic | 35.0% | |
| ATGTGATGATAGGTTTGTCA+CGG | - | chr4_4:35838185-35838204 | None:intergenic | 35.0% | |
| !! | GCCTTTTTCATGTAGAGAAT+GGG | + | chr4_4:35838373-35838392 | Msa0678930:CDS | 35.0% |
| TCCCATTCTCTACATGAAAA+AGG | - | chr4_4:35838377-35838396 | None:intergenic | 35.0% | |
| !! | ATGCTGTCGATTTACACAAA+AGG | + | chr4_4:35838406-35838425 | Msa0678930:CDS | 35.0% |
| TATGAAGCAACATAATCCTC+TGG | - | chr4_4:35838513-35838532 | None:intergenic | 35.0% | |
| CACATCATCATACCTTCAAA+TGG | + | chr4_4:35838643-35838662 | Msa0678930:CDS | 35.0% | |
| TCTATAATAGGCCAAAGCTT+TGG | - | chr4_4:35838670-35838689 | None:intergenic | 35.0% | |
| AGTGAGTCAATAAATCCACT+AGG | + | chr4_4:35838691-35838710 | Msa0678930:CDS | 35.0% | |
| !!! | CTTTGTTTTTTGGGTTTTCC+TGG | - | chr4_4:35838730-35838749 | None:intergenic | 35.0% |
| !!! | AAGTCCCTTGGAAGTATTTT+AGG | - | chr4_4:35838781-35838800 | None:intergenic | 35.0% |
| ! | GTTACCTTATTTCCACCTTT+AGG | - | chr4_4:35838889-35838908 | None:intergenic | 35.0% |
| GTAATGATACCCAAGTCATA+AGG | - | chr4_4:35839226-35839245 | None:intergenic | 35.0% | |
| AGCGACTAATGTGAAAATCA+AGG | + | chr4_4:35839276-35839295 | Msa0678930:three_prime_UTR | 35.0% | |
| ATGTGAAAATCAAGGCCTAA+TGG | + | chr4_4:35839284-35839303 | Msa0678930:three_prime_UTR | 35.0% | |
| GCATAATCATTCAGACCATT+AGG | - | chr4_4:35839302-35839321 | None:intergenic | 35.0% | |
| ACCTATCATCACATTGCTTG+AGG | + | chr4_4:35838191-35838210 | Msa0678930:CDS | 40.0% | |
| CCTATCATCACATTGCTTGA+GGG | + | chr4_4:35838192-35838211 | Msa0678930:CDS | 40.0% | |
| TCGAGCAATAGTTGGATCTT+TGG | - | chr4_4:35838291-35838310 | None:intergenic | 40.0% | |
| GATCCAACTATTGCTCGAAA+AGG | + | chr4_4:35838293-35838312 | Msa0678930:CDS | 40.0% | |
| !! | GGCCTTTTTCATGTAGAGAA+TGG | + | chr4_4:35838372-35838391 | Msa0678930:CDS | 40.0% |
| TGCAGAAAATGGGATTTGAC+TGG | + | chr4_4:35838438-35838457 | Msa0678930:CDS | 40.0% | |
| TTCATGGTTATGCCACATGA+AGG | - | chr4_4:35838487-35838506 | None:intergenic | 40.0% | |
| !! | CATAATCCTCTGGAACTTCA+TGG | - | chr4_4:35838503-35838522 | None:intergenic | 40.0% |
| !! | CAAAGCTTTGGACCATTTGA+AGG | - | chr4_4:35838658-35838677 | None:intergenic | 40.0% |
| CTTCAAATGGTCCAAAGCTT+TGG | + | chr4_4:35838656-35838675 | Msa0678930:CDS | 40.0% | |
| GAAAGTTTGGTCACAATGTG+AGG | + | chr4_4:35838827-35838846 | Msa0678930:CDS | 40.0% | |
| GACTTGCAAGGGTAAAACAA+CGG | + | chr4_4:35838849-35838868 | Msa0678930:CDS | 40.0% | |
| GATGCCTAAAGGTGGAAATA+AGG | + | chr4_4:35838882-35838901 | Msa0678930:CDS | 40.0% | |
| GAAGTCACAAAAGAAGTCAC+AGG | + | chr4_4:35839016-35839035 | Msa0678930:CDS | 40.0% | |
| ACCTATCATCACATTGCTTG+AGG | + | chr4_4:35838191-35838210 | Msa0678930:CDS | 40.0% | |
| CCTATCATCACATTGCTTGA+GGG | + | chr4_4:35838192-35838211 | Msa0678930:CDS | 40.0% | |
| TCGAGCAATAGTTGGATCTT+TGG | - | chr4_4:35838291-35838310 | None:intergenic | 40.0% | |
| GATCCAACTATTGCTCGAAA+AGG | + | chr4_4:35838293-35838312 | Msa0678930:CDS | 40.0% | |
| !! | GGCCTTTTTCATGTAGAGAA+TGG | + | chr4_4:35838372-35838391 | Msa0678930:CDS | 40.0% |
| TGCAGAAAATGGGATTTGAC+TGG | + | chr4_4:35838438-35838457 | Msa0678930:CDS | 40.0% | |
| TTCATGGTTATGCCACATGA+AGG | - | chr4_4:35838487-35838506 | None:intergenic | 40.0% | |
| !! | CATAATCCTCTGGAACTTCA+TGG | - | chr4_4:35838503-35838522 | None:intergenic | 40.0% |
| !! | CAAAGCTTTGGACCATTTGA+AGG | - | chr4_4:35838658-35838677 | None:intergenic | 40.0% |
| CTTCAAATGGTCCAAAGCTT+TGG | + | chr4_4:35838656-35838675 | Msa0678930:CDS | 40.0% | |
| GAAAGTTTGGTCACAATGTG+AGG | + | chr4_4:35838827-35838846 | Msa0678930:CDS | 40.0% | |
| GACTTGCAAGGGTAAAACAA+CGG | + | chr4_4:35838849-35838868 | Msa0678930:CDS | 40.0% | |
| GATGCCTAAAGGTGGAAATA+AGG | + | chr4_4:35838882-35838901 | Msa0678930:CDS | 40.0% | |
| GAAGTCACAAAAGAAGTCAC+AGG | + | chr4_4:35839016-35839035 | Msa0678930:CDS | 40.0% | |
| CCCTCAAGCAATGTGATGAT+AGG | - | chr4_4:35838195-35838214 | None:intergenic | 45.0% | |
| CTCAAAGTGAACTGATGCGA+AGG | + | chr4_4:35838247-35838266 | Msa0678930:CDS | 45.0% | |
| ! | TGAACTGATGCGAAGGTATG+CGG | + | chr4_4:35838254-35838273 | Msa0678930:CDS | 45.0% |
| !! | TGGCCTTTTCGAGCAATAGT+TGG | - | chr4_4:35838299-35838318 | None:intergenic | 45.0% |
| TATTGCTCGAAAAGGCCAAG+AGG | + | chr4_4:35838301-35838320 | Msa0678930:CDS | 45.0% | |
| ATTGCTCGAAAAGGCCAAGA+GGG | + | chr4_4:35838302-35838321 | Msa0678930:CDS | 45.0% | |
| GACTTGCGCTTGCAGAAAAT+GGG | + | chr4_4:35838428-35838447 | Msa0678930:CDS | 45.0% | |
| AAGGCAATGCTATGGCAACA+CGG | - | chr4_4:35838468-35838487 | None:intergenic | 45.0% | |
| GCATAACCATGAAGTTCCAG+AGG | + | chr4_4:35838494-35838513 | Msa0678930:CDS | 45.0% | |
| TTCACAGTTGGAAAGTCCCT+TGG | - | chr4_4:35838793-35838812 | None:intergenic | 45.0% | |
| TCACAATGTGAGGACTTGCA+AGG | + | chr4_4:35838837-35838856 | Msa0678930:CDS | 45.0% | |
| CACAATGTGAGGACTTGCAA+GGG | + | chr4_4:35838838-35838857 | Msa0678930:CDS | 45.0% | |
| TCACAAAAGAAGTCACAGGC+TGG | + | chr4_4:35839020-35839039 | Msa0678930:CDS | 45.0% | |
| TTTGATGCTTGTGATCCTCG+AGG | - | chr4_4:35839092-35839111 | None:intergenic | 45.0% | |
| CCCTCAAGCAATGTGATGAT+AGG | - | chr4_4:35838195-35838214 | None:intergenic | 45.0% | |
| CTCAAAGTGAACTGATGCGA+AGG | + | chr4_4:35838247-35838266 | Msa0678930:CDS | 45.0% | |
| ! | TGAACTGATGCGAAGGTATG+CGG | + | chr4_4:35838254-35838273 | Msa0678930:CDS | 45.0% |
| !! | TGGCCTTTTCGAGCAATAGT+TGG | - | chr4_4:35838299-35838318 | None:intergenic | 45.0% |
| TATTGCTCGAAAAGGCCAAG+AGG | + | chr4_4:35838301-35838320 | Msa0678930:CDS | 45.0% | |
| ATTGCTCGAAAAGGCCAAGA+GGG | + | chr4_4:35838302-35838321 | Msa0678930:CDS | 45.0% | |
| GACTTGCGCTTGCAGAAAAT+GGG | + | chr4_4:35838428-35838447 | Msa0678930:CDS | 45.0% | |
| AAGGCAATGCTATGGCAACA+CGG | - | chr4_4:35838468-35838487 | None:intergenic | 45.0% | |
| GCATAACCATGAAGTTCCAG+AGG | + | chr4_4:35838494-35838513 | Msa0678930:CDS | 45.0% | |
| TTCACAGTTGGAAAGTCCCT+TGG | - | chr4_4:35838793-35838812 | None:intergenic | 45.0% | |
| TCACAATGTGAGGACTTGCA+AGG | + | chr4_4:35838837-35838856 | Msa0678930:CDS | 45.0% | |
| CACAATGTGAGGACTTGCAA+GGG | + | chr4_4:35838838-35838857 | Msa0678930:CDS | 45.0% | |
| TCACAAAAGAAGTCACAGGC+TGG | + | chr4_4:35839020-35839039 | Msa0678930:CDS | 45.0% | |
| TTTGATGCTTGTGATCCTCG+AGG | - | chr4_4:35839092-35839111 | None:intergenic | 45.0% | |
| ! | GAACTGATGCGAAGGTATGC+GGG | + | chr4_4:35838255-35838274 | Msa0678930:CDS | 50.0% |
| AGATGGGTGGTCTCCACATT+GGG | + | chr4_4:35838329-35838348 | Msa0678930:CDS | 50.0% | |
| TCTAGATCACCAGCCCAATG+TGG | - | chr4_4:35838345-35838364 | None:intergenic | 50.0% | |
| ! | GCTGGTGATCTAGAGCATCA+TGG | + | chr4_4:35838351-35838370 | Msa0678930:CDS | 50.0% |
| GGACTTGCGCTTGCAGAAAA+TGG | + | chr4_4:35838427-35838446 | Msa0678930:CDS | 50.0% | |
| GCCATAGCATTGCCTTCATG+TGG | + | chr4_4:35838472-35838491 | Msa0678930:CDS | 50.0% | |
| GCCACATGAAGGCAATGCTA+TGG | - | chr4_4:35838476-35838495 | None:intergenic | 50.0% | |
| GCAGATAGAGCGATGCCTAA+AGG | + | chr4_4:35838871-35838890 | Msa0678930:CDS | 50.0% | |
| GATAGAGCGATGCCTAAAGG+TGG | + | chr4_4:35838874-35838893 | Msa0678930:CDS | 50.0% | |
| ! | GAACTGATGCGAAGGTATGC+GGG | + | chr4_4:35838255-35838274 | Msa0678930:CDS | 50.0% |
| AGATGGGTGGTCTCCACATT+GGG | + | chr4_4:35838329-35838348 | Msa0678930:CDS | 50.0% | |
| TCTAGATCACCAGCCCAATG+TGG | - | chr4_4:35838345-35838364 | None:intergenic | 50.0% | |
| ! | GCTGGTGATCTAGAGCATCA+TGG | + | chr4_4:35838351-35838370 | Msa0678930:CDS | 50.0% |
| GGACTTGCGCTTGCAGAAAA+TGG | + | chr4_4:35838427-35838446 | Msa0678930:CDS | 50.0% | |
| GCCATAGCATTGCCTTCATG+TGG | + | chr4_4:35838472-35838491 | Msa0678930:CDS | 50.0% | |
| GCCACATGAAGGCAATGCTA+TGG | - | chr4_4:35838476-35838495 | None:intergenic | 50.0% | |
| GCAGATAGAGCGATGCCTAA+AGG | + | chr4_4:35838871-35838890 | Msa0678930:CDS | 50.0% | |
| GATAGAGCGATGCCTAAAGG+TGG | + | chr4_4:35838874-35838893 | Msa0678930:CDS | 50.0% | |
| AAGGCCAAGAGGGTAGCAGA+TGG | + | chr4_4:35838312-35838331 | Msa0678930:CDS | 55.0% | |
| AGGCCAAGAGGGTAGCAGAT+GGG | + | chr4_4:35838313-35838332 | Msa0678930:CDS | 55.0% | |
| CAGATGGGTGGTCTCCACAT+TGG | + | chr4_4:35838328-35838347 | Msa0678930:CDS | 55.0% | |
| GGCGCTCTTCTCATACCTAG+TGG | - | chr4_4:35838709-35838728 | None:intergenic | 55.0% | |
| !! | CTAGGTATGAGAAGAGCGCC+AGG | + | chr4_4:35838709-35838728 | Msa0678930:CDS | 55.0% |
| TCACAAGCACCTCAACCTCG+AGG | + | chr4_4:35839050-35839069 | Msa0678930:CDS | 55.0% | |
| GCTTGTGATCCTCGAGGTTG+AGG | - | chr4_4:35839062-35839081 | None:intergenic | 55.0% | |
| ! | TGAGGTGCTTGTGATCCTCG+AGG | - | chr4_4:35839068-35839087 | None:intergenic | 55.0% |
| TCACAAGCACCTCAACCTCG+AGG | + | chr4_4:35839050-35839069 | Msa0678930:CDS | 55.0% | |
| GCTTGTGATCCTCGAGGTTG+AGG | - | chr4_4:35839062-35839081 | None:intergenic | 55.0% | |
| AAGGCCAAGAGGGTAGCAGA+TGG | + | chr4_4:35838312-35838331 | Msa0678930:CDS | 55.0% | |
| AGGCCAAGAGGGTAGCAGAT+GGG | + | chr4_4:35838313-35838332 | Msa0678930:CDS | 55.0% | |
| CAGATGGGTGGTCTCCACAT+TGG | + | chr4_4:35838328-35838347 | Msa0678930:CDS | 55.0% | |
| GGCGCTCTTCTCATACCTAG+TGG | - | chr4_4:35838709-35838728 | None:intergenic | 55.0% | |
| !! | CTAGGTATGAGAAGAGCGCC+AGG | + | chr4_4:35838709-35838728 | Msa0678930:CDS | 55.0% |
| TCACAAGCACCTCAACCTCG+AGG | + | chr4_4:35839050-35839069 | Msa0678930:CDS | 55.0% | |
| GCTTGTGATCCTCGAGGTTG+AGG | - | chr4_4:35839062-35839081 | None:intergenic | 55.0% | |
| ! | TGAGGTGCTTGTGATCCTCG+AGG | - | chr4_4:35839068-35839087 | None:intergenic | 55.0% |
| TCACAAGCACCTCAACCTCG+AGG | + | chr4_4:35839050-35839069 | Msa0678930:CDS | 55.0% | |
| GCTTGTGATCCTCGAGGTTG+AGG | - | chr4_4:35839062-35839081 | None:intergenic | 55.0% | |
| CCACCCATCTGCTACCCTCT+TGG | - | chr4_4:35838319-35838338 | None:intergenic | 60.0% | |
| CCAAGAGGGTAGCAGATGGG+TGG | + | chr4_4:35838316-35838335 | Msa0678930:CDS | 60.0% | |
| CCACCCATCTGCTACCCTCT+TGG | - | chr4_4:35838319-35838338 | None:intergenic | 60.0% | |
| CCAAGAGGGTAGCAGATGGG+TGG | + | chr4_4:35838316-35838335 | Msa0678930:CDS | 60.0% | |
| GGGTGGTCTCCACATTGGGC+TGG | + | chr4_4:35838333-35838352 | Msa0678930:CDS | 65.0% | |
| GGGTGGTCTCCACATTGGGC+TGG | + | chr4_4:35838333-35838352 | Msa0678930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 35838147 | 35839321 | 35838147 | ID=Msa0678930;Name=Msa0678930 |
| chr4_4 | mRNA | 35838147 | 35839321 | 35838147 | ID=Msa0678930-mRNA-1;Parent=Msa0678930;Name=Msa0678930-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.5|0.33|0.66|1|1|3|203|266 |
| chr4_4 | exon | 35838147 | 35838538 | 35838147 | ID=Msa0678930-mRNA-1:exon:8485;Parent=Msa0678930-mRNA-1 |
| chr4_4 | exon | 35838615 | 35838903 | 35838615 | ID=Msa0678930-mRNA-1:exon:8486;Parent=Msa0678930-mRNA-1 |
| chr4_4 | exon | 35838999 | 35839321 | 35838999 | ID=Msa0678930-mRNA-1:exon:8487;Parent=Msa0678930-mRNA-1 |
| chr4_4 | CDS | 35838147 | 35838538 | 35838147 | ID=Msa0678930-mRNA-1:cds;Parent=Msa0678930-mRNA-1 |
| chr4_4 | CDS | 35838615 | 35838903 | 35838615 | ID=Msa0678930-mRNA-1:cds;Parent=Msa0678930-mRNA-1 |
| chr4_4 | CDS | 35838999 | 35839118 | 35838999 | ID=Msa0678930-mRNA-1:cds;Parent=Msa0678930-mRNA-1 |
| chr4_4 | three_prime_UTR | 35839119 | 35839321 | 35839119 | ID=Msa0678930-mRNA-1:three_prime_utr;Parent=Msa0678930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
