Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1381530 | GAU14190.1 | 66.258 | 326 | 72 | 8 | 1 | 295 | 1 | 319 | 6.89e-113 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1381530 | sp|Q8L7A0|TAUE3_ARATH | 56.327 | 245 | 93 | 6 | 6 | 242 | 11 | 249 | 1.56e-67 | 221 |
| Msa1381530 | sp|Q8L7A0|TAUE3_ARATH | 56.000 | 75 | 33 | 0 | 211 | 285 | 296 | 370 | 2.58e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1381530 | A0A072V1T8 | 64.706 | 85 | 30 | 0 | 211 | 295 | 290 | 374 | 1.31e-18 | 96.3 |
| Msa1381530 | A0A072V1T8 | 75.455 | 220 | 39 | 6 | 1 | 210 | 1 | 215 | 4.63e-92 | 289 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1381530 | 0.808550 | 2.931724e-50 | -8.615850e-47 |
| Msa0016580 | Msa1381530 | 0.802732 | 4.879389e-49 | -8.615850e-47 |
| Msa0026450 | Msa1381530 | 0.813060 | 3.098981e-51 | -8.615850e-47 |
| Msa0105070 | Msa1381530 | 0.816715 | 4.794729e-52 | -8.615850e-47 |
| Msa1374470 | Msa1381530 | 0.800599 | 1.336169e-48 | -8.615850e-47 |
| Msa1381530 | Msa1387600 | 0.822769 | 1.984065e-53 | -8.615850e-47 |
| Msa1381530 | Msa1440560 | 0.802449 | 5.581954e-49 | -8.615850e-47 |
| Msa1381530 | Msa1451570 | 0.825797 | 3.853319e-54 | -8.615850e-47 |
| Msa1381530 | Msa1466540 | 0.831957 | 1.243284e-55 | -8.615850e-47 |
| Msa0604350 | Msa1381530 | 0.812577 | 3.952161e-51 | -8.615850e-47 |
| Msa0661650 | Msa1381530 | 0.811828 | 5.758787e-51 | -8.615850e-47 |
| Msa0724210 | Msa1381530 | 0.814401 | 1.570233e-51 | -8.615850e-47 |
| Msa0729800 | Msa1381530 | 0.836014 | 1.199303e-56 | -8.615850e-47 |
| Msa0733290 | Msa1381530 | 0.802613 | 5.163988e-49 | -8.615850e-47 |
| Msa0760130 | Msa1381530 | 0.804640 | 1.960411e-49 | -8.615850e-47 |
| Msa0766630 | Msa1381530 | 0.833870 | 4.160155e-56 | -8.615850e-47 |
| Msa0808010 | Msa1381530 | 0.813090 | 3.052058e-51 | -8.615850e-47 |
| Msa0808020 | Msa1381530 | 0.805960 | 1.037169e-49 | -8.615850e-47 |
| Msa0810220 | Msa1381530 | 0.800534 | 1.377501e-48 | -8.615850e-47 |
| Msa0131770 | Msa1381530 | 0.812687 | 3.739143e-51 | -8.615850e-47 |
| Msa0142220 | Msa1381530 | 0.816519 | 5.303274e-52 | -8.615850e-47 |
| Msa0145260 | Msa1381530 | 0.806187 | 9.291693e-50 | -8.615850e-47 |
| Msa0153910 | Msa1381530 | 0.803156 | 3.988285e-49 | -8.615850e-47 |
| Msa0165520 | Msa1381530 | 0.804925 | 1.709334e-49 | -8.615850e-47 |
| Msa0214300 | Msa1381530 | 0.828501 | 8.680807e-55 | -8.615850e-47 |
| Msa0218370 | Msa1381530 | 0.803528 | 3.339535e-49 | -8.615850e-47 |
| Msa0227480 | Msa1381530 | 0.808946 | 2.411830e-50 | -8.615850e-47 |
| Msa1249490 | Msa1381530 | 0.808768 | 2.633249e-50 | -8.615850e-47 |
| Msa1252260 | Msa1381530 | 0.802942 | 4.416003e-49 | -8.615850e-47 |
| Msa1270230 | Msa1381530 | 0.801347 | 9.399480e-49 | -8.615850e-47 |
| Msa1309030 | Msa1381530 | 0.800279 | 1.552843e-48 | -8.615850e-47 |
| Msa1313980 | Msa1381530 | 0.835346 | 1.769795e-56 | -8.615850e-47 |
| Msa1344130 | Msa1381530 | 0.828624 | 8.107944e-55 | -8.615850e-47 |
| Msa0367870 | Msa1381530 | 0.813062 | 3.095960e-51 | -8.615850e-47 |
| Msa0430420 | Msa1381530 | 0.824207 | 9.145880e-54 | -8.615850e-47 |
| Msa0433730 | Msa1381530 | 0.874704 | 5.483476e-68 | -8.615850e-47 |
| Msa0455760 | Msa1381530 | 0.818612 | 1.789792e-52 | -8.615850e-47 |
| Msa0466120 | Msa1381530 | 0.807984 | 3.870591e-50 | -8.615850e-47 |
| Msa0989360 | Msa1381530 | 0.829208 | 5.853400e-55 | -8.615850e-47 |
| Msa0999290 | Msa1381530 | 0.809026 | 2.318920e-50 | -8.615850e-47 |
| Msa1001180 | Msa1381530 | 0.810946 | 8.948680e-51 | -8.615850e-47 |
| Msa1002330 | Msa1381530 | 0.805281 | 1.439705e-49 | -8.615850e-47 |
| Msa1023950 | Msa1381530 | 0.828123 | 1.070801e-54 | -8.615850e-47 |
| Msa1035480 | Msa1381530 | 0.804898 | 1.731429e-49 | -8.615850e-47 |
| Msa1065570 | Msa1381530 | 0.805864 | 1.086604e-49 | -8.615850e-47 |
| Msa1075650 | Msa1381530 | 0.803525 | 3.343877e-49 | -8.615850e-47 |
| Msa0267370 | Msa1381530 | 0.821663 | 3.581538e-53 | -8.615850e-47 |
| Msa0285450 | Msa1381530 | 0.809608 | 1.739257e-50 | -8.615850e-47 |
| Msa0290870 | Msa1381530 | 0.806535 | 7.848264e-50 | -8.615850e-47 |
| Msa0294030 | Msa1381530 | 0.817677 | 2.913415e-52 | -8.615850e-47 |
| Msa0305190 | Msa1381530 | 0.802060 | 6.710379e-49 | -8.615850e-47 |
| Msa0363790 | Msa1381530 | 0.811613 | 6.413871e-51 | -8.615850e-47 |
| Msa1114030 | Msa1381530 | 0.807831 | 4.171541e-50 | -8.615850e-47 |
| Msa1116260 | Msa1381530 | 0.801402 | 9.160154e-49 | -8.615850e-47 |
| Msa1162780 | Msa1381530 | 0.812415 | 4.289708e-51 | -8.615850e-47 |
| Msa1163090 | Msa1381530 | 0.814619 | 1.404718e-51 | -8.615850e-47 |
| Msa1185110 | Msa1381530 | 0.803739 | 3.018985e-49 | -8.615850e-47 |
| Msa1195190 | Msa1381530 | 0.802002 | 6.897423e-49 | -8.615850e-47 |
| Msa1198770 | Msa1381530 | 0.835864 | 1.309151e-56 | -8.615850e-47 |
| Msa0486690 | Msa1381530 | 0.803423 | 3.510809e-49 | -8.615850e-47 |
| Msa0521630 | Msa1381530 | 0.915222 | 7.606665e-85 | -8.615850e-47 |
| Msa0600700 | Msa1381530 | 0.811370 | 7.242248e-51 | -8.615850e-47 |
| Msa0846330 | Msa1381530 | 0.800205 | 1.607766e-48 | -8.615850e-47 |
| Msa0846350 | Msa1381530 | 0.800089 | 1.697205e-48 | -8.615850e-47 |
| Msa0898750 | Msa1381530 | 0.820746 | 5.828411e-53 | -8.615850e-47 |
| Msa0901930 | Msa1381530 | 0.817656 | 2.944775e-52 | -8.615850e-47 |
| Msa0903990 | Msa1381530 | 0.801705 | 7.935885e-49 | -8.615850e-47 |
| Msa0927310 | Msa1381530 | 0.812430 | 4.257525e-51 | -8.615850e-47 |
| Msa0928130 | Msa1381530 | 0.820221 | 7.689828e-53 | -8.615850e-47 |
| Msa0933100 | Msa1381530 | 0.804625 | 1.974347e-49 | -8.615850e-47 |
| Msa0964310 | Msa1381530 | 0.810629 | 1.048394e-50 | -8.615850e-47 |
| Msa0969520 | Msa1381530 | 0.811138 | 8.134160e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1381530 | MtrunA17_Chr3g0139541 | 75.455 | 220 | 39 | 6 | 1 | 210 | 1 | 215 | 3.89e-95 | 289 |
| Msa1381530 | MtrunA17_Chr3g0139541 | 72.000 | 75 | 21 | 0 | 211 | 285 | 290 | 364 | 3.38e-22 | 96.7 |
| Msa1381530 | MtrunA17_Chr5g0403901 | 61.628 | 172 | 57 | 3 | 44 | 208 | 47 | 216 | 2.02e-57 | 192 |
| Msa1381530 | MtrunA17_Chr8g0373471 | 58.427 | 178 | 66 | 2 | 39 | 210 | 36 | 211 | 1.09e-52 | 179 |
| Msa1381530 | MtrunA17_Chr8g0380191 | 49.282 | 209 | 63 | 1 | 120 | 285 | 9 | 217 | 3.35e-49 | 166 |
| Msa1381530 | MtrunA17_Chr8g0380211 | 65.468 | 139 | 46 | 1 | 73 | 211 | 81 | 217 | 1.58e-47 | 166 |
| Msa1381530 | MtrunA17_Chr7g0265481 | 62.963 | 135 | 48 | 1 | 74 | 208 | 65 | 197 | 4.31e-47 | 164 |
| Msa1381530 | MtrunA17_Chr1g0157751 | 43.902 | 246 | 122 | 5 | 6 | 250 | 1 | 231 | 2.25e-46 | 162 |
| Msa1381530 | MtrunA17_Chr1g0179621 | 58.088 | 136 | 55 | 1 | 73 | 208 | 65 | 198 | 7.59e-41 | 148 |
| Msa1381530 | MtrunA17_Chr3g0139621 | 68.750 | 64 | 20 | 0 | 222 | 285 | 27 | 90 | 7.02e-15 | 70.9 |
| Msa1381530 | MtrunA17_Chr2g0280401 | 34.351 | 131 | 81 | 3 | 97 | 224 | 87 | 215 | 8.07e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1381530 | AT2G25737.2 | 56.327 | 245 | 93 | 6 | 6 | 242 | 11 | 249 | 1.10e-69 | 221 |
| Msa1381530 | AT2G25737.2 | 56.000 | 75 | 33 | 0 | 211 | 285 | 296 | 370 | 2.13e-14 | 73.6 |
| Msa1381530 | AT2G25737.1 | 56.327 | 245 | 93 | 6 | 6 | 242 | 11 | 249 | 1.59e-68 | 221 |
| Msa1381530 | AT2G25737.1 | 56.000 | 75 | 33 | 0 | 211 | 285 | 296 | 370 | 2.63e-14 | 73.6 |
| Msa1381530 | AT2G36630.1 | 46.429 | 196 | 88 | 3 | 13 | 208 | 16 | 194 | 9.98e-43 | 153 |
| Msa1381530 | AT1G11540.2 | 36.923 | 195 | 120 | 2 | 44 | 237 | 27 | 219 | 9.25e-23 | 98.2 |
| Msa1381530 | AT1G11540.1 | 40.580 | 138 | 79 | 2 | 101 | 237 | 1 | 136 | 8.04e-22 | 94.7 |
| Msa1381530 | AT1G61740.1 | 40.171 | 117 | 67 | 2 | 96 | 211 | 83 | 197 | 7.71e-19 | 87.0 |
| Msa1381530 | AT4G21260.1 | 36.364 | 110 | 63 | 3 | 99 | 208 | 73 | 175 | 9.26e-13 | 68.6 |
Find 82 sgRNAs with CRISPR-Local
Find 874 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTGTGTTATTGCCTTAC+TGG | 0.128495 | tig0020435:-123923 | Msa1381530:CDS |
| AGGTAGGATGCCTCAGTTTA+AGG | 0.184914 | tig0020435:+125941 | None:intergenic |
| TCAACTAAAGCATTCTTTAA+AGG | 0.195205 | tig0020435:-125683 | Msa1381530:CDS |
| GCAACGTTATATTTCCTAAT+TGG | 0.207868 | tig0020435:-125837 | Msa1381530:CDS |
| GATTGCTAATCATGAATATA+TGG | 0.212904 | tig0020435:-115349 | Msa1381530:CDS |
| GTTATGCAGGAAATGGAATT+TGG | 0.220314 | tig0020435:-128847 | Msa1381530:intron |
| TGGATGTTGTTGTTGTTATT+TGG | 0.236995 | tig0020435:-129520 | Msa1381530:CDS |
| GAGATAGCCGTAGATGATTT+AGG | 0.240024 | tig0020435:+128707 | None:intergenic |
| GCCAAATCATAGTCAATAAT+TGG | 0.269429 | tig0020435:+125910 | None:intergenic |
| GCCAATTATTGACTATGATT+TGG | 0.277334 | tig0020435:-125911 | Msa1381530:CDS |
| TTATTGTTCTCTCTTCTAAT+TGG | 0.285522 | tig0020435:-115157 | Msa1381530:three_prime_UTR |
| CAACTAAAGCATTCTTTAAA+GGG | 0.285668 | tig0020435:-125682 | Msa1381530:CDS |
| AATATAGTCACAAGCCAATT+AGG | 0.287287 | tig0020435:+125823 | None:intergenic |
| CAACAACAACATCCATAATA+TGG | 0.295672 | tig0020435:+129528 | None:intergenic |
| AAAATAATAGAGAGAGAAAA+AGG | 0.299493 | tig0020435:-115131 | Msa1381530:three_prime_UTR |
| CTATGATTAGTCTTATTATT+GGG | 0.302506 | tig0020435:-128736 | Msa1381530:CDS |
| TAAGGAAACCATAATGAAAA+AGG | 0.303076 | tig0020435:-125645 | Msa1381530:intron |
| TCTATGATTAGTCTTATTAT+TGG | 0.311454 | tig0020435:-128737 | Msa1381530:CDS |
| GTGCAGATTCCAATCTCATT+TGG | 0.311886 | tig0020435:-124045 | Msa1381530:intron |
| TGCAGATTCCAATCTCATTT+GGG | 0.313349 | tig0020435:-124044 | Msa1381530:intron |
| TGAAAATGAGATCCATATTA+TGG | 0.315941 | tig0020435:-129540 | Msa1381530:CDS |
| AGGGGTTGAGACATGGAATA+AGG | 0.326091 | tig0020435:-125663 | Msa1381530:CDS |
| TGACTGTATCGGGTAAAATA+AGG | 0.341088 | tig0020435:-129480 | Msa1381530:CDS |
| TATTATCTGCAAGTGTTAGA+AGG | 0.353439 | tig0020435:-115279 | Msa1381530:three_prime_UTR |
| TTTGAGAATATCTGCATGTA+TGG | 0.373890 | tig0020435:-115324 | Msa1381530:CDS |
| TGGCGTACTCGGTGGATTGT+TGG | 0.379079 | tig0020435:-123899 | Msa1381530:CDS |
| TTTGGAAGCGTTGGTGGTAT+TGG | 0.379280 | tig0020435:-128779 | Msa1381530:CDS |
| AATTTGGGTGGCGAATGTTT+TGG | 0.389803 | tig0020435:-128831 | Msa1381530:CDS |
| TGTATGGGTCGTAGCACATT+TGG | 0.393841 | tig0020435:-115308 | Msa1381530:exon |
| GGCGTACTCGGTGGATTGTT+GGG | 0.402747 | tig0020435:-123898 | Msa1381530:CDS |
| TTCTTTCCCTTGGTCACCTA+TGG | 0.403383 | tig0020435:+123969 | None:intergenic |
| GCCTTACTGGCTGGCGTACT+CGG | 0.406008 | tig0020435:-123910 | Msa1381530:CDS |
| TTATGCAGGAAATGGAATTT+GGG | 0.411245 | tig0020435:-128846 | Msa1381530:intron |
| TATGGTCATGGGTGTGTCTC+TGG | 0.422703 | tig0020435:-125980 | Msa1381530:CDS |
| TAGCTGTAAATTCTTTCCCT+TGG | 0.435477 | tig0020435:+123959 | None:intergenic |
| TAACACAATAGATGATTAGT+TGG | 0.439361 | tig0020435:+123935 | None:intergenic |
| TAAAAGCTGTTCATTTCTTG+TGG | 0.443139 | tig0020435:-129396 | Msa1381530:CDS |
| TGTGTTATTGCCTTACTGGC+TGG | 0.446356 | tig0020435:-123919 | Msa1381530:CDS |
| CATTTCTTGTGGAAATCAGA+TGG | 0.449461 | tig0020435:-129385 | Msa1381530:CDS |
| GTATGGGTCGTAGCACATTT+GGG | 0.453714 | tig0020435:-115307 | Msa1381530:exon |
| GGAAGCGTTGGTGGTATTGG+TGG | 0.457442 | tig0020435:-128776 | Msa1381530:CDS |
| ACAGTTACCCCAAATGAGAT+TGG | 0.462663 | tig0020435:+124036 | None:intergenic |
| ACCGAGTACGCCAGCCAGTA+AGG | 0.475453 | tig0020435:+123909 | None:intergenic |
| ATTGCTAATCATGAATATAT+GGG | 0.479029 | tig0020435:-115348 | Msa1381530:CDS |
| ATTTGGGGTAACTGTATATG+AGG | 0.480113 | tig0020435:-124028 | Msa1381530:CDS |
| TTGTGGAAATCAGATGGATC+CGG | 0.480152 | tig0020435:-129379 | Msa1381530:intron |
| GTTTGCTTCAGGTATGGTCA+TGG | 0.490765 | tig0020435:-125992 | Msa1381530:intron |
| ATTCAACCTATGCTTATGCT+TGG | 0.496468 | tig0020435:-125880 | Msa1381530:CDS |
| AATTAGAAGAGAGAACAATA+AGG | 0.512234 | tig0020435:+115159 | None:intergenic |
| GAGGCAACTGCATTATTCAC+AGG | 0.513347 | tig0020435:-124009 | Msa1381530:CDS |
| TTTATCACATCATAGCATCA+AGG | 0.514251 | tig0020435:-121718 | Msa1381530:intron |
| AGCGTTGGTGGTATTGGTGG+TGG | 0.516406 | tig0020435:-128773 | Msa1381530:CDS |
| CTTATGCTTGGAATCAGCAT+TGG | 0.519202 | tig0020435:-125868 | Msa1381530:CDS |
| GGAGCGTTTGGAAGCGTTGG+TGG | 0.522663 | tig0020435:-128785 | Msa1381530:CDS |
| GGATTGTTGGGACTAGGAGG+CGG | 0.524109 | tig0020435:-123886 | Msa1381530:CDS |
| TTTGCTTCAGGTATGGTCAT+GGG | 0.524119 | tig0020435:-125991 | Msa1381530:intron |
| GTTTGATCCTAAATCATCTA+CGG | 0.525763 | tig0020435:-128714 | Msa1381530:CDS |
| CGGAGTTGGCATTGTAAACA+TGG | 0.533788 | tig0020435:-115379 | Msa1381530:CDS |
| CTCGGTGGATTGTTGGGACT+AGG | 0.537823 | tig0020435:-123892 | Msa1381530:CDS |
| TCTTTAAAGGGGTTGAGACA+TGG | 0.539156 | tig0020435:-125670 | Msa1381530:CDS |
| TAAACTGAGGCATCCTACCT+TGG | 0.541474 | tig0020435:-125938 | Msa1381530:CDS |
| AACACAATAGATGATTAGTT+GGG | 0.544781 | tig0020435:+123936 | None:intergenic |
| GTTGTAGTAACATTAAAACT+TGG | 0.544896 | tig0020435:+129445 | None:intergenic |
| GTTGGTGGTATTGGTGGTGG+TGG | 0.551633 | tig0020435:-128770 | Msa1381530:CDS |
| AACTAAAGCATTCTTTAAAG+GGG | 0.553035 | tig0020435:-125681 | Msa1381530:CDS |
| CATTGCAGTACAGATTGCTA+AGG | 0.554231 | tig0020435:-124329 | Msa1381530:intron |
| GTCAATAATTGGCATGTCCA+AGG | 0.558233 | tig0020435:+125921 | None:intergenic |
| GGAGGAGCGTTTGGAAGCGT+TGG | 0.577581 | tig0020435:-128788 | Msa1381530:CDS |
| GTCAAAATCACTCCATGACT+AGG | 0.578526 | tig0020435:+115238 | None:intergenic |
| ATTTGAAACTCACTTGAGGA+GGG | 0.578779 | tig0020435:+123827 | None:intergenic |
| AATTTGAAACTCACTTGAGG+AGG | 0.583316 | tig0020435:+123826 | None:intergenic |
| ACTAGGAGGCGGATTCATGT+TGG | 0.598929 | tig0020435:-123875 | Msa1381530:CDS |
| TTGAGAATATCTGCATGTAT+GGG | 0.599525 | tig0020435:-115323 | Msa1381530:CDS |
| GCAGATTCCAATCTCATTTG+GGG | 0.608721 | tig0020435:-124043 | Msa1381530:intron |
| TGCAGGAAATGGAATTTGGG+TGG | 0.610262 | tig0020435:-128843 | Msa1381530:intron |
| CTGATTCCAAGCATAAGCAT+AGG | 0.613635 | tig0020435:+125874 | None:intergenic |
| ATAATTGGCATGTCCAAGGT+AGG | 0.619549 | tig0020435:+125925 | None:intergenic |
| TTACTGGCTGGCGTACTCGG+TGG | 0.621474 | tig0020435:-123907 | Msa1381530:CDS |
| GGTGGATTGTTGGGACTAGG+AGG | 0.632796 | tig0020435:-123889 | Msa1381530:CDS |
| TTAGCTTCCATAGGTGACCA+AGG | 0.643565 | tig0020435:-123976 | Msa1381530:CDS |
| AGGCAACTGCATTATTCACA+GGG | 0.652144 | tig0020435:-124008 | Msa1381530:CDS |
| TAGCTTCCATAGGTGACCAA+GGG | 0.662890 | tig0020435:-123975 | Msa1381530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAAAAAAAAATATT+GGG | + | tig0020435:119628-119647 | None:intergenic | 0.0% |
| !!! | ATTTTATTTTATTTTAAATA+TGG | - | tig0020435:123451-123470 | Msa1381530:intron | 0.0% |
| !!! | ATAATGAATATTTTTTTTGA+AGG | + | tig0020435:115482-115501 | None:intergenic | 10.0% |
| !!! | AAGTATTAAAGTTTTTTTTA+AGG | - | tig0020435:115668-115687 | Msa1381530:intron | 10.0% |
| !!! | ATTTTTAAAAAAAAGCTTTA+CGG | + | tig0020435:115719-115738 | None:intergenic | 10.0% |
| !!! | TACAAATATTTTATTTATTG+TGG | - | tig0020435:116695-116714 | Msa1381530:intron | 10.0% |
| !!! | ACAAATATTTTATTTATTGT+GGG | - | tig0020435:116696-116715 | Msa1381530:intron | 10.0% |
| !! | TATTTGTAGATTTATTATAT+AGG | + | tig0020435:116752-116771 | None:intergenic | 10.0% |
| !!! | AAAATTAACTAACTAATTTT+TGG | + | tig0020435:117133-117152 | None:intergenic | 10.0% |
| !! | TATTTCTCAATTAAAAATAT+GGG | + | tig0020435:117674-117693 | None:intergenic | 10.0% |
| !! | ATATTTCTCAATTAAAAATA+TGG | + | tig0020435:117675-117694 | None:intergenic | 10.0% |
| !!! | AATTTATTCTAATATTTTGT+GGG | - | tig0020435:120936-120955 | Msa1381530:intron | 10.0% |
| !! | TACAATACAAATATAAATAA+AGG | - | tig0020435:121368-121387 | Msa1381530:intron | 10.0% |
| !! | AAATAAAAAATATAAATCGT+AGG | + | tig0020435:122784-122803 | None:intergenic | 10.0% |
| !!! | ATTTTATTTTAAATATGGAT+TGG | - | tig0020435:123456-123475 | Msa1381530:intron | 10.0% |
| !! | GACTTATAATAAAATTTCTA+AGG | + | tig0020435:115367-115386 | None:intergenic | 15.0% |
| !! | ATAGCGTAATAAATAATAAA+TGG | - | tig0020435:115542-115561 | Msa1381530:intron | 15.0% |
| !!! | ATTTTATCTTTAATATCTAC+TGG | + | tig0020435:116446-116465 | None:intergenic | 15.0% |
| !!! | ATAAATTATTGACTATGATT+TGG | - | tig0020435:116614-116633 | Msa1381530:intron | 15.0% |
| !!! | CAAATATTTTATTTATTGTG+GGG | - | tig0020435:116697-116716 | Msa1381530:intron | 15.0% |
| !!! | ATTTGAAATTAATAAGTGAT+GGG | - | tig0020435:117028-117047 | Msa1381530:intron | 15.0% |
| !!! | AAATTCATTAAAAGCTTTAT+AGG | + | tig0020435:117221-117240 | None:intergenic | 15.0% |
| !!! | TTTTAAACTTTTGAAATATG+TGG | - | tig0020435:117600-117619 | Msa1381530:intron | 15.0% |
| !!! | TTTAAACTTTTGAAATATGT+GGG | - | tig0020435:117601-117620 | Msa1381530:intron | 15.0% |
| !! | AAAACTTATTATATTAGACA+TGG | - | tig0020435:117713-117732 | Msa1381530:intron | 15.0% |
| !! | ATGTTAATAAGAATAATCAA+GGG | + | tig0020435:118391-118410 | None:intergenic | 15.0% |
| !! | TATGTTAATAAGAATAATCA+AGG | + | tig0020435:118392-118411 | None:intergenic | 15.0% |
| !!! | ATTTTATCTTTAATATCTAC+TGG | + | tig0020435:116446-116465 | None:intergenic | 15.0% |
| !!! | TTGTTATTTTTTTTTGTCTT+GGG | - | tig0020435:119431-119450 | Msa1381530:intron | 15.0% |
| !!! | TTTTGTAGTTTTTTTTCTTA+AGG | - | tig0020435:119492-119511 | Msa1381530:intron | 15.0% |
| !!! | TTTGTAGTTTTTTTTCTTAA+GGG | - | tig0020435:119493-119512 | Msa1381530:intron | 15.0% |
| !! | TGAGAAATTGTTATAAATAA+CGG | + | tig0020435:119602-119621 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTGTTTAGATTC+TGG | - | tig0020435:120077-120096 | Msa1381530:intron | 15.0% |
| !!! | GAATTTATTCTAATATTTTG+TGG | - | tig0020435:120935-120954 | Msa1381530:intron | 15.0% |
| !! | ATACAACAAATATAAAACAA+AGG | - | tig0020435:121394-121413 | Msa1381530:intron | 15.0% |
| !!! | TTTATATTGAAAACTCTTTT+CGG | + | tig0020435:123005-123024 | None:intergenic | 15.0% |
| !!! | TTAAAGTTTTGGATAATATT+AGG | - | tig0020435:123184-123203 | Msa1381530:intron | 15.0% |
| !! | TTCAAATATCAAATATTTCA+TGG | - | tig0020435:123350-123369 | Msa1381530:intron | 15.0% |
| !! | TAAAATAATATTATGCTTGA+TGG | + | tig0020435:124446-124465 | None:intergenic | 15.0% |
| !!! | ATATTATTTTATCTCAAATC+CGG | - | tig0020435:124455-124474 | Msa1381530:intron | 15.0% |
| !! | AATTCATATACATTGATATT+TGG | + | tig0020435:124800-124819 | None:intergenic | 15.0% |
| !! | TAATACATCAATAAAATACA+AGG | + | tig0020435:124930-124949 | None:intergenic | 15.0% |
| !!! | AAATACTCTTTTCTTTATTA+TGG | - | tig0020435:125316-125335 | Msa1381530:intron | 15.0% |
| !! | AACTTAATTTCAGTTTAATA+TGG | - | tig0020435:126581-126600 | Msa1381530:intron | 15.0% |
| !! | AAAACTAGAATGTTAAATTA+TGG | + | tig0020435:126642-126661 | None:intergenic | 15.0% |
| !! | AATTCATTACCATAAATTAT+AGG | + | tig0020435:127181-127200 | None:intergenic | 15.0% |
| !! | GAATTATTTATTACATTCAT+TGG | - | tig0020435:127196-127215 | Msa1381530:intron | 15.0% |
| !!! | AATTTCTTCTAATATTTTGT+GGG | - | tig0020435:128240-128259 | Msa1381530:intron | 15.0% |
| !! | TTTATGATTAAATTGTTTAC+AGG | - | tig0020435:122554-122573 | Msa1381530:intron | 15.0% |
| !! | TATAAATATCTAAACCAAAT+AGG | + | tig0020435:129109-129128 | None:intergenic | 15.0% |
| !!! | TGTTTTTCATTCATTTTATT+AGG | - | tig0020435:129276-129295 | Msa1381530:intron | 15.0% |
| !! | AATAAAAAGTGAAATCTTAC+TGG | + | tig0020435:115341-115360 | None:intergenic | 20.0% |
| !! | TAATAAATGGTATGATAAGA+AGG | - | tig0020435:115555-115574 | Msa1381530:intron | 20.0% |
| !! | TGACTTATAATAAAATAGAG+AGG | - | tig0020435:115645-115664 | Msa1381530:intron | 20.0% |
| !!! | TAAAGTTTGTTTTTTTCTTG+AGG | - | tig0020435:115693-115712 | Msa1381530:intron | 20.0% |
| !!! | AAAATGTACTACATACTTTT+TGG | - | tig0020435:115734-115753 | Msa1381530:intron | 20.0% |
| !!! | TCTATGATTAGTCTTATTAT+TGG | - | tig0020435:115941-115960 | Msa1381530:intron | 20.0% |
| !!! | CTATGATTAGTCTTATTATT+GGG | - | tig0020435:115942-115961 | Msa1381530:intron | 20.0% |
| !! | TAACATAATTAGGAAGATAT+TGG | - | tig0020435:116063-116082 | Msa1381530:intron | 20.0% |
| !! | TTGAAAGTTTAAAGATAGAT+CGG | - | tig0020435:116343-116362 | Msa1381530:intron | 20.0% |
| !! | CATCACTTATTAATTTCAAA+TGG | + | tig0020435:117029-117048 | None:intergenic | 20.0% |
| !!! | CATTTGAAATTAATAAGTGA+TGG | - | tig0020435:117027-117046 | Msa1381530:intron | 20.0% |
| !! | ATTTGAAAAAAGACTTCATT+GGG | + | tig0020435:117577-117596 | None:intergenic | 20.0% |
| !! | AATTTGAAAAAAGACTTCAT+TGG | + | tig0020435:117578-117597 | None:intergenic | 20.0% |
| !!! | TTAAACTTTTGAAATATGTG+GGG | - | tig0020435:117602-117621 | Msa1381530:intron | 20.0% |
| !! | ACAAATTCAACAAAGAATTA+AGG | + | tig0020435:117870-117889 | None:intergenic | 20.0% |
| !! | GTATTAATGCCAATTAAAAT+TGG | + | tig0020435:117905-117924 | None:intergenic | 20.0% |
| !!! | GTTTTCATATACATGTAAAA+TGG | + | tig0020435:118031-118050 | None:intergenic | 20.0% |
| !! | ATAAGTTTATAATACAACTC+TGG | - | tig0020435:118084-118103 | Msa1381530:intron | 20.0% |
| !! | TAAGTTTATAATACAACTCT+GGG | - | tig0020435:118085-118104 | Msa1381530:intron | 20.0% |
| !! | TTTGATGTTGTTGTATAATT+AGG | + | tig0020435:118346-118365 | None:intergenic | 20.0% |
| !!! | GTTGATAATGTTGTTAAATT+AGG | + | tig0020435:118466-118485 | None:intergenic | 20.0% |
| !! | TTGAAAGTTTAAAGATAGAT+CGG | - | tig0020435:116343-116362 | Msa1381530:intron | 20.0% |
| !! | ATAAAAAGAAATACAGTTAG+AGG | + | tig0020435:118961-118980 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTTATCTTTTCC+AGG | - | tig0020435:118968-118987 | Msa1381530:intron | 20.0% |
| !!! | TAATAGTTTTCACTTCATAT+TGG | - | tig0020435:119076-119095 | Msa1381530:intron | 20.0% |
| !!! | AACTTTATTTCATAAACTCA+AGG | - | tig0020435:119206-119225 | Msa1381530:intron | 20.0% |
| !!! | TTTTGTAGTTTTTTTCTTAC+GGG | + | tig0020435:119317-119336 | None:intergenic | 20.0% |
| !!! | GTTTTGTAGTTTTTTTCTTA+CGG | + | tig0020435:119318-119337 | None:intergenic | 20.0% |
| !! | AGACAAAAAAAAATAACAAG+TGG | + | tig0020435:119430-119449 | None:intergenic | 20.0% |
| !!! | CTTGTTATTTTTTTTTGTCT+TGG | - | tig0020435:119430-119449 | Msa1381530:intron | 20.0% |
| !!! | TGTTATTTTTTTTTGTCTTG+GGG | - | tig0020435:119432-119451 | Msa1381530:intron | 20.0% |
| !!! | TTGTAGTTTTTTTTCTTAAG+GGG | - | tig0020435:119494-119513 | Msa1381530:intron | 20.0% |
| !! | CAATCATAATTATGTTTGTA+TGG | + | tig0020435:119695-119714 | None:intergenic | 20.0% |
| !!! | TCAAAACTGACAATATTTTT+AGG | + | tig0020435:119772-119791 | None:intergenic | 20.0% |
| !! | CCATTATCATTAATACAAAA+TGG | + | tig0020435:119862-119881 | None:intergenic | 20.0% |
| !!! | CCATTTTGTATTAATGATAA+TGG | - | tig0020435:119859-119878 | Msa1381530:intron | 20.0% |
| !! | GACATAAGAAAAAATGATTT+CGG | + | tig0020435:120045-120064 | None:intergenic | 20.0% |
| !!! | AATTTGACTTTGTAATTGAA+AGG | + | tig0020435:120224-120243 | None:intergenic | 20.0% |
| !! | TGTTATAAACTGTTAGTATA+TGG | + | tig0020435:120407-120426 | None:intergenic | 20.0% |
| !!! | GGTTTTGGTTTTAATAAAAA+CGG | - | tig0020435:120974-120993 | Msa1381530:intron | 20.0% |
| !!! | TTCTTTTCAATATTCTCTTT+GGG | + | tig0020435:121772-121791 | None:intergenic | 20.0% |
| !!! | TTTCTTTTCAATATTCTCTT+TGG | + | tig0020435:121773-121792 | None:intergenic | 20.0% |
| !!! | TCTATTGATCACTTTTATTA+GGG | + | tig0020435:122269-122288 | None:intergenic | 20.0% |
| !!! | ATCTATTGATCACTTTTATT+AGG | + | tig0020435:122270-122289 | None:intergenic | 20.0% |
| !! | TAAAAGTGATCAATAGATAA+TGG | - | tig0020435:122272-122291 | Msa1381530:intron | 20.0% |
| !! | AAAAGTGATCAATAGATAAT+GGG | - | tig0020435:122273-122292 | Msa1381530:intron | 20.0% |
| !! | ATGATTAAATTGTTTACATG+TGG | - | tig0020435:122557-122576 | Msa1381530:intron | 20.0% |
| !!! | GTTCTAAATCATATAATAGT+AGG | + | tig0020435:122591-122610 | None:intergenic | 20.0% |
| !!! | TTGTTTTGACAATTGTTTTA+CGG | - | tig0020435:122622-122641 | Msa1381530:intron | 20.0% |
| !!! | TTGTTTTGACAATTGTTTTA+CGG | - | tig0020435:122622-122641 | Msa1381530:intron | 20.0% |
| !! | TTATTGAATCACCAAATATT+TGG | + | tig0020435:122754-122773 | None:intergenic | 20.0% |
| !! | ATTTGGAAATATGACAATTT+AGG | + | tig0020435:122824-122843 | None:intergenic | 20.0% |
| !! | ATAACTAATTAGTGTTCATA+AGG | + | tig0020435:122883-122902 | None:intergenic | 20.0% |
| !! | AATGTGGATTTGAATTTATT+TGG | - | tig0020435:123297-123316 | Msa1381530:intron | 20.0% |
| !!! | TTTTCACTTTGGTATTATTT+GGG | - | tig0020435:123649-123668 | Msa1381530:intron | 20.0% |
| !! | TGTATTAATACATGTGAAAT+TGG | - | tig0020435:124051-124070 | Msa1381530:intron | 20.0% |
| !!! | TTGAGATTTTGTTTATTCAT+AGG | - | tig0020435:124172-124191 | Msa1381530:intron | 20.0% |
| !!! | ACACCATGATTAATATTTTA+TGG | - | tig0020435:124484-124503 | Msa1381530:intron | 20.0% |
| !! | GATCCATAAAATATTAATCA+TGG | + | tig0020435:124490-124509 | None:intergenic | 20.0% |
| !!! | TCAAATTTTGCATTTTCAAA+AGG | - | tig0020435:124508-124527 | Msa1381530:intron | 20.0% |
| !!! | AAAAGGATTTGATTTGATTT+TGG | - | tig0020435:124525-124544 | Msa1381530:intron | 20.0% |
| !! | TGAAAAATGAGATATTTGAT+TGG | - | tig0020435:124563-124582 | Msa1381530:intron | 20.0% |
| !!! | TGTTGTCACATTTTTATTAA+TGG | - | tig0020435:124603-124622 | Msa1381530:intron | 20.0% |
| !!! | GTTGTCACATTTTTATTAAT+GGG | - | tig0020435:124604-124623 | Msa1381530:intron | 20.0% |
| !! | ACATGTTCTCTTATTATAAA+GGG | - | tig0020435:125128-125147 | Msa1381530:intron | 20.0% |
| !!! | AAAAGAGTATTTTTCAACAA+AGG | + | tig0020435:125308-125327 | None:intergenic | 20.0% |
| !! | TAATGAGATTATGAATTTAG+CGG | - | tig0020435:125478-125497 | Msa1381530:intron | 20.0% |
| !! | TCATTTAAATACATCTAATC+TGG | + | tig0020435:125629-125648 | None:intergenic | 20.0% |
| !!! | ATTTATTTGGGATAAGTTAT+TGG | - | tig0020435:125855-125874 | Msa1381530:CDS | 20.0% |
| !! | CAATTTATATAGATGAACAA+AGG | + | tig0020435:126811-126830 | None:intergenic | 20.0% |
| !!! | TCAAAAATTTTGTTGCTATA+AGG | - | tig0020435:126925-126944 | Msa1381530:intron | 20.0% |
| !!! | TTTAGTAAATTTGCTTCTAA+TGG | + | tig0020435:127089-127108 | None:intergenic | 20.0% |
| !! | TAAAAGAACAATTAATGTCA+AGG | + | tig0020435:127230-127249 | None:intergenic | 20.0% |
| !!! | CATACTATCATTTTCATTTT+CGG | + | tig0020435:127910-127929 | None:intergenic | 20.0% |
| !!! | ATATTTTTGAAAATGACTCT+CGG | + | tig0020435:128151-128170 | None:intergenic | 20.0% |
| !!! | GAATTTCTTCTAATATTTTG+TGG | - | tig0020435:128239-128258 | Msa1381530:intron | 20.0% |
| !!! | GGTTTTGGTTTTAATAAAAA+CGG | - | tig0020435:120974-120993 | Msa1381530:intron | 20.0% |
| !!! | TCTATTGATCACTTTTATTA+GGG | + | tig0020435:122269-122288 | None:intergenic | 20.0% |
| !!! | ATCTATTGATCACTTTTATT+AGG | + | tig0020435:122270-122289 | None:intergenic | 20.0% |
| !! | TAAAAGTGATCAATAGATAA+TGG | - | tig0020435:122272-122291 | Msa1381530:intron | 20.0% |
| !! | AAAAGTGATCAATAGATAAT+GGG | - | tig0020435:122273-122292 | Msa1381530:intron | 20.0% |
| !!! | TTTCTTATATTTAAAACCGA+AGG | + | tig0020435:128829-128848 | None:intergenic | 20.0% |
| !! | AAAAAGATAATGATCCTATT+TGG | - | tig0020435:129004-129023 | Msa1381530:intron | 20.0% |
| !! | AAAAGATAATGATCCTATTT+GGG | - | tig0020435:129005-129024 | Msa1381530:intron | 20.0% |
| !!! | TCTCTTCAAACTTTTTTTTA+GGG | - | tig0020435:129135-129154 | Msa1381530:intron | 20.0% |
| !!! | TTTTCATTCATTTTATTAGG+CGG | - | tig0020435:129279-129298 | Msa1381530:intron | 20.0% |
| !! | ATTGCTAATCATGAATATAT+GGG | - | tig0020435:129330-129349 | Msa1381530:intron | 20.0% |
| !!! | ACTATTTTAGTACAACTTTT+AGG | - | tig0020435:129492-129511 | Msa1381530:CDS | 20.0% |
| !! | AAAATAATAGAGAGAGAAAA+AGG | - | tig0020435:129547-129566 | Msa1381530:CDS | 20.0% |
| ! | TGAAAATGAGATCCATATTA+TGG | - | tig0020435:115138-115157 | Msa1381530:three_prime_UTR | 25.0% |
| !!! | ATCATTTTTTGTGACTGTAT+CGG | - | tig0020435:115187-115206 | Msa1381530:three_prime_UTR | 25.0% |
| ! | GTTGTAGTAACATTAAAACT+TGG | + | tig0020435:115236-115255 | None:intergenic | 25.0% |
| !!! | CGATCCAAATTCTTATTTTA+GGG | + | tig0020435:115760-115779 | None:intergenic | 25.0% |
| !!! | ACGATCCAAATTCTTATTTT+AGG | + | tig0020435:115761-115780 | None:intergenic | 25.0% |
| !!! | AATGTTTTGGGTAGTTTTAT+TGG | - | tig0020435:115860-115879 | Msa1381530:intron | 25.0% |
| !!! | ATCATGCTAGTTTTTACTAT+AGG | - | tig0020435:116035-116054 | Msa1381530:intron | 25.0% |
| ! | ATAGGTTGTGTAACATAATT+AGG | - | tig0020435:116053-116072 | Msa1381530:intron | 25.0% |
| !! | TACTGGCAATTTACATTTTA+AGG | + | tig0020435:116429-116448 | None:intergenic | 25.0% |
| !! | TTTTCTTCAACCTTAAATTG+AGG | - | tig0020435:116550-116569 | Msa1381530:intron | 25.0% |
| ! | AAATAAATTGTGTACATCGA+GGG | - | tig0020435:116989-117008 | Msa1381530:intron | 25.0% |
| ! | AATGAATTTCATATCCCTTA+TGG | - | tig0020435:117232-117251 | Msa1381530:intron | 25.0% |
| ! | ATGAATTTCATATCCCTTAT+GGG | - | tig0020435:117233-117252 | Msa1381530:intron | 25.0% |
| !! | TAACATACATCAAGTGATTT+TGG | - | tig0020435:117443-117462 | Msa1381530:intron | 25.0% |
| !!! | TAAACTTTTGAAATATGTGG+GGG | - | tig0020435:117603-117622 | Msa1381530:intron | 25.0% |
| ! | AAATCCAATATATGACCAAA+GGG | + | tig0020435:117745-117764 | None:intergenic | 25.0% |
| !!! | ACATAACTGCCAATTTTAAT+TGG | - | tig0020435:117893-117912 | Msa1381530:intron | 25.0% |
| !!! | GTTTTATTGATGAAAAAGGA+CGG | - | tig0020435:117928-117947 | Msa1381530:intron | 25.0% |
| !! | AGAAGAGAGCATATTTATAT+AGG | + | tig0020435:118064-118083 | None:intergenic | 25.0% |
| !! | ACTAGCAAGAATATATTTTC+AGG | + | tig0020435:118121-118140 | None:intergenic | 25.0% |
| !! | ACAAATCTTGAAAGTTGATT+CGG | - | tig0020435:118270-118289 | Msa1381530:intron | 25.0% |
| !! | ATTGCTTATTGTTCTCTTTT+TGG | - | tig0020435:118875-118894 | Msa1381530:intron | 25.0% |
| !! | TTGCTTATTGTTCTCTTTTT+GGG | - | tig0020435:118876-118895 | Msa1381530:intron | 25.0% |
| ! | GGAAAAAACAGTTGAATTAA+TGG | + | tig0020435:118906-118925 | None:intergenic | 25.0% |
| !! | TCAACTAAAGCATTCTTTAA+AGG | - | tig0020435:118995-119014 | Msa1381530:intron | 25.0% |
| !! | CAACTAAAGCATTCTTTAAA+GGG | - | tig0020435:118996-119015 | Msa1381530:intron | 25.0% |
| !! | AACTAAAGCATTCTTTAAAG+GGG | - | tig0020435:118997-119016 | Msa1381530:intron | 25.0% |
| ! | TAAGGAAACCATAATGAAAA+AGG | - | tig0020435:119033-119052 | Msa1381530:intron | 25.0% |
| !!! | AAAAGAGACCTTTTTCATTA+TGG | + | tig0020435:119044-119063 | None:intergenic | 25.0% |
| !!! | CCAGTATAGTTTTAAATGTA+CGG | - | tig0020435:119103-119122 | Msa1381530:intron | 25.0% |
| !!! | GTTATTTTTTTTTGTCTTGG+GGG | - | tig0020435:119433-119452 | Msa1381530:intron | 25.0% |
| !!! | TTATTTTTTTTTGTCTTGGG+GGG | - | tig0020435:119434-119453 | Msa1381530:intron | 25.0% |
| !!! | CAAATAGTCATTTTACAACT+AGG | + | tig0020435:119574-119593 | None:intergenic | 25.0% |
| ! | GAAATTGTTATAAATAACGG+TGG | + | tig0020435:119599-119618 | None:intergenic | 25.0% |
| ! | CAATTAGTTAGTCATAACTT+TGG | + | tig0020435:119917-119936 | None:intergenic | 25.0% |
| ! | ACTTCTTACAGGTAATAATT+TGG | - | tig0020435:120512-120531 | Msa1381530:intron | 25.0% |
| ! | AGCAAAAATTGAGTGATAAT+AGG | + | tig0020435:120539-120558 | None:intergenic | 25.0% |
| !! | AACACAATAGATGATTAGTT+GGG | + | tig0020435:120745-120764 | None:intergenic | 25.0% |
| ! | TAACACAATAGATGATTAGT+TGG | + | tig0020435:120746-120765 | None:intergenic | 25.0% |
| ! | TATCTTGATCATCAAATAGT+TGG | - | tig0020435:120900-120919 | Msa1381530:intron | 25.0% |
| ! | AAAACAAAGGAACAAAATTG+AGG | - | tig0020435:121407-121426 | Msa1381530:intron | 25.0% |
| !!! | AAATCTACTTATTTTCTCCT+TGG | - | tig0020435:121509-121528 | Msa1381530:intron | 25.0% |
| !!! | AATCTACTTATTTTCTCCTT+GGG | - | tig0020435:121510-121529 | Msa1381530:intron | 25.0% |
| ! | TAAAAAGTAATCAATCTTCG+TGG | - | tig0020435:121534-121553 | Msa1381530:intron | 25.0% |
| ! | AAAAAGTAATCAATCTTCGT+GGG | - | tig0020435:121535-121554 | Msa1381530:intron | 25.0% |
| ! | AAAATACATTATCAACCCTT+GGG | - | tig0020435:121585-121604 | Msa1381530:intron | 25.0% |
| !! | TCTTTTCAATATTCTCTTTG+GGG | + | tig0020435:121771-121790 | None:intergenic | 25.0% |
| ! | AAAAGAAAGAGAAGAAATAG+AGG | - | tig0020435:121794-121813 | Msa1381530:intron | 25.0% |
| ! | AAAGAAAGAGAAGAAATAGA+GGG | - | tig0020435:121795-121814 | Msa1381530:intron | 25.0% |
| ! | GTCAAAAAACGTGTAAAATT+TGG | - | tig0020435:121925-121944 | Msa1381530:intron | 25.0% |
| ! | TGTCAAAACAATCGAAATTA+GGG | + | tig0020435:122613-122632 | None:intergenic | 25.0% |
| ! | TTGTCAAAACAATCGAAATT+AGG | + | tig0020435:122614-122633 | None:intergenic | 25.0% |
| ! | TGTCAAAACAATCGAAATTA+GGG | + | tig0020435:122613-122632 | None:intergenic | 25.0% |
| ! | TTGTCAAAACAATCGAAATT+AGG | + | tig0020435:122614-122633 | None:intergenic | 25.0% |
| ! | ATCGAATGAATTGATCAATT+TGG | + | tig0020435:122841-122860 | None:intergenic | 25.0% |
| !!! | GATAAAACGTTGTATTTTTG+AGG | - | tig0020435:122937-122956 | Msa1381530:intron | 25.0% |
| ! | TCAATTTATGTGTATGTCTT+TGG | - | tig0020435:123032-123051 | Msa1381530:intron | 25.0% |
| !! | AAGGTATAAATTGATTTACG+TGG | + | tig0020435:123106-123125 | None:intergenic | 25.0% |
| !! | AAACAGTATTTGCTAAACAA+TGG | + | tig0020435:123232-123251 | None:intergenic | 25.0% |
| !!! | CTGTTTGTTGTATATAAATG+TGG | - | tig0020435:123281-123300 | Msa1381530:intron | 25.0% |
| ! | TGAATTCAAGTACTATGAAA+TGG | - | tig0020435:123506-123525 | Msa1381530:intron | 25.0% |
| !! | CTTTTCACTTTGGTATTATT+TGG | - | tig0020435:123648-123667 | Msa1381530:intron | 25.0% |
| ! | CTTCATGTGAATTTGTATAT+TGG | - | tig0020435:123691-123710 | Msa1381530:intron | 25.0% |
| ! | TCAAGATAAGAACAAATTCT+TGG | + | tig0020435:123739-123758 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTTGTGGAATTT+TGG | - | tig0020435:123945-123964 | Msa1381530:CDS | 25.0% |
| ! | TTCTTGATCAATATGAAAGA+TGG | - | tig0020435:123974-123993 | Msa1381530:CDS | 25.0% |
| !!! | TAAATTGATCCATTTTTGTG+TGG | - | tig0020435:124074-124093 | Msa1381530:intron | 25.0% |
| ! | TGTTTATTCATAGGATGAAT+TGG | - | tig0020435:124181-124200 | Msa1381530:intron | 25.0% |
| ! | TTGAATTGTAATTGCATTTG+TGG | - | tig0020435:124227-124246 | Msa1381530:intron | 25.0% |
| !! | ACATGATGTTAGTTTGAATA+TGG | + | tig0020435:124275-124294 | None:intergenic | 25.0% |
| !! | ATCATAACATGATTACCTTT+TGG | + | tig0020435:124365-124384 | None:intergenic | 25.0% |
| ! | AAAAATGTGACAACAATGTT+TGG | + | tig0020435:124598-124617 | None:intergenic | 25.0% |
| !!! | AATATTTTAGACTCATCCTT+GGG | + | tig0020435:124686-124705 | None:intergenic | 25.0% |
| !!! | TAATATTTTAGACTCATCCT+TGG | + | tig0020435:124687-124706 | None:intergenic | 25.0% |
| !!! | TAATTTTCAAGCAATTCTGA+AGG | - | tig0020435:124887-124906 | Msa1381530:intron | 25.0% |
| ! | CACATGTTCTCTTATTATAA+AGG | - | tig0020435:125127-125146 | Msa1381530:intron | 25.0% |
| ! | CATGTTCTCTTATTATAAAG+GGG | - | tig0020435:125129-125148 | Msa1381530:intron | 25.0% |
| ! | AATTATCATTCTCTATCAAG+TGG | - | tig0020435:125239-125258 | Msa1381530:intron | 25.0% |
| ! | ATTATCATTCTCTATCAAGT+GGG | - | tig0020435:125240-125259 | Msa1381530:intron | 25.0% |
| ! | TAAATCAATTAACAATGCAG+CGG | + | tig0020435:125445-125464 | None:intergenic | 25.0% |
| !! | GAATTTCTTTTTGTAGTTTG+AGG | - | tig0020435:125768-125787 | Msa1381530:intron | 25.0% |
| ! | ATAATTGTACAATCACCTTT+GGG | + | tig0020435:126004-126023 | None:intergenic | 25.0% |
| ! | TATAATTGTACAATCACCTT+TGG | + | tig0020435:126005-126024 | None:intergenic | 25.0% |
| ! | AGGTGATTGTACAATTATAT+TGG | - | tig0020435:126006-126025 | Msa1381530:intron | 25.0% |
| ! | ATAATTGTACAATCACCTTT+GGG | + | tig0020435:126004-126023 | None:intergenic | 25.0% |
| ! | TATAATTGTACAATCACCTT+TGG | + | tig0020435:126005-126024 | None:intergenic | 25.0% |
| ! | AGGTGATTGTACAATTATAT+TGG | - | tig0020435:126006-126025 | Msa1381530:intron | 25.0% |
| ! | ATAAACAAGCTATTATAACG+AGG | + | tig0020435:126256-126275 | None:intergenic | 25.0% |
| ! | AATCTTACTTCCATTTCTTT+CGG | + | tig0020435:126383-126402 | None:intergenic | 25.0% |
| ! | AAAGAAATGGAAGTAAGATT+TGG | - | tig0020435:126383-126402 | Msa1381530:intron | 25.0% |
| !! | TTTGAACTGAAATAACCTTT+TGG | - | tig0020435:126427-126446 | Msa1381530:intron | 25.0% |
| !! | ATAACTTTTCATTAGACACA+TGG | + | tig0020435:126499-126518 | None:intergenic | 25.0% |
| ! | TGTGTCTAATGAAAAGTTAT+TGG | - | tig0020435:126499-126518 | Msa1381530:intron | 25.0% |
| ! | ATCTGACAATGTTGTAATTT+AGG | - | tig0020435:126530-126549 | Msa1381530:intron | 25.0% |
| ! | ATTTCAGTTTAATATGGTCA+AGG | - | tig0020435:126587-126606 | Msa1381530:intron | 25.0% |
| !!! | CTTTGTTTTAGTTTTACTCT+TGG | - | tig0020435:126738-126757 | Msa1381530:intron | 25.0% |
| ! | TATAAATTGTCTCTAGTAGA+TGG | - | tig0020435:126822-126841 | Msa1381530:intron | 25.0% |
| ! | GTGTTTATGTCATAAAGTAA+AGG | + | tig0020435:126971-126990 | None:intergenic | 25.0% |
| ! | TACTTTATGACATAAACACT+TGG | - | tig0020435:126972-126991 | Msa1381530:intron | 25.0% |
| ! | AACACTTGGATCATATTTAT+TGG | - | tig0020435:126986-127005 | Msa1381530:intron | 25.0% |
| ! | ACACTTGGATCATATTTATT+GGG | - | tig0020435:126987-127006 | Msa1381530:intron | 25.0% |
| ! | AGCAAATTTACTAAAACCAA+CGG | - | tig0020435:127094-127113 | Msa1381530:intron | 25.0% |
| !! | TCATTTTCGACAATTTCAAA+GGG | + | tig0020435:127140-127159 | None:intergenic | 25.0% |
| !! | TTCATTTTCGACAATTTCAA+AGG | + | tig0020435:127141-127160 | None:intergenic | 25.0% |
| ! | ATTGTCGAAAATGAAATTAG+TGG | - | tig0020435:127146-127165 | Msa1381530:intron | 25.0% |
| ! | TACCATAAATTATAGGAGTT+GGG | + | tig0020435:127174-127193 | None:intergenic | 25.0% |
| ! | TTACCATAAATTATAGGAGT+TGG | + | tig0020435:127175-127194 | None:intergenic | 25.0% |
| !! | TTCTTTTAACCAAATGACTT+AGG | - | tig0020435:127242-127261 | Msa1381530:intron | 25.0% |
| ! | GAGAAATCACATAATTTCTT+TGG | - | tig0020435:127820-127839 | Msa1381530:intron | 25.0% |
| ! | CGAAAATGAAAATGATAGTA+TGG | - | tig0020435:127908-127927 | Msa1381530:intron | 25.0% |
| !! | TTTATTAAGTGTTGCATCAT+GGG | - | tig0020435:128088-128107 | Msa1381530:intron | 25.0% |
| ! | CTAAAAAAAAGTTTGAAGAG+AGG | + | tig0020435:129136-129155 | None:intergenic | 25.0% |
| !!! | CTCTCTTCAAACTTTTTTTT+AGG | - | tig0020435:129134-129153 | Msa1381530:intron | 25.0% |
| ! | AACATCTCAAAATTCATAAG+CGG | + | tig0020435:129260-129279 | None:intergenic | 25.0% |
| ! | GATTGCTAATCATGAATATA+TGG | - | tig0020435:129329-129348 | Msa1381530:intron | 25.0% |
| ! | AATTAGAAGAGAGAACAATA+AGG | + | tig0020435:129522-129541 | None:intergenic | 25.0% |
| ! | TTATTGTTCTCTCTTCTAAT+TGG | - | tig0020435:129521-129540 | Msa1381530:CDS | 25.0% |
| CAACAACAACATCCATAATA+TGG | + | tig0020435:115153-115172 | None:intergenic | 30.0% | |
| ! | TGGATGTTGTTGTTGTTATT+TGG | - | tig0020435:115158-115177 | Msa1381530:three_prime_UTR | 30.0% |
| !!! | TCATTTTTTGTGACTGTATC+GGG | - | tig0020435:115188-115207 | Msa1381530:three_prime_UTR | 30.0% |
| TAAAAGCTGTTCATTTCTTG+TGG | - | tig0020435:115282-115301 | Msa1381530:three_prime_UTR | 30.0% | |
| TTGGCCCTAAAATAAGAATT+TGG | - | tig0020435:115753-115772 | Msa1381530:intron | 30.0% | |
| !!! | AACTGGCTGTATTTTTTATG+TGG | - | tig0020435:115791-115810 | Msa1381530:intron | 30.0% |
| ! | GTTTACTATTGTTGTTATGC+AGG | - | tig0020435:115818-115837 | Msa1381530:intron | 30.0% |
| ! | TATTGTTGTTATGCAGGAAA+TGG | - | tig0020435:115824-115843 | Msa1381530:intron | 30.0% |
| TTATGCAGGAAATGGAATTT+GGG | - | tig0020435:115832-115851 | Msa1381530:intron | 30.0% | |
| !!! | GGTAGTTTTATTGGTTTTTG+TGG | - | tig0020435:115869-115888 | Msa1381530:intron | 30.0% |
| !!! | AGTTTTATTGGTTTTTGTGG+AGG | - | tig0020435:115872-115891 | Msa1381530:intron | 30.0% |
| GTTTGATCCTAAATCATCTA+CGG | - | tig0020435:115964-115983 | Msa1381530:intron | 30.0% | |
| !!! | TTTACATTTTAAGGTGCGTT+TGG | + | tig0020435:116420-116439 | None:intergenic | 30.0% |
| ! | GCCAATTATTGACTATGATT+TGG | - | tig0020435:116590-116609 | Msa1381530:intron | 30.0% |
| GCCAAATCATAGTCAATAAT+TGG | + | tig0020435:116594-116613 | None:intergenic | 30.0% | |
| ! | ACTATGATTTGGCATAAATC+TGG | - | tig0020435:116625-116644 | Msa1381530:intron | 30.0% |
| ACAATTTATTTCATCCCAAG+GGG | + | tig0020435:116980-116999 | None:intergenic | 30.0% | |
| CACAATTTATTTCATCCCAA+GGG | + | tig0020435:116981-117000 | None:intergenic | 30.0% | |
| ACACAATTTATTTCATCCCA+AGG | + | tig0020435:116982-117001 | None:intergenic | 30.0% | |
| GAAATAAATTGTGTACATCG+AGG | - | tig0020435:116988-117007 | Msa1381530:intron | 30.0% | |
| AATAAATTGTGTACATCGAG+GGG | - | tig0020435:116990-117009 | Msa1381530:intron | 30.0% | |
| AATCACTTGATGTATGTTAG+CGG | + | tig0020435:117442-117461 | None:intergenic | 30.0% | |
| TACTTAACACACAGTGAAAT+TGG | + | tig0020435:117487-117506 | None:intergenic | 30.0% | |
| AATCCAATATATGACCAAAG+GGG | + | tig0020435:117744-117763 | None:intergenic | 30.0% | |
| CAAATCCAATATATGACCAA+AGG | + | tig0020435:117746-117765 | None:intergenic | 30.0% | |
| !! | CTGCGTTTTATTGATGAAAA+AGG | - | tig0020435:117924-117943 | Msa1381530:intron | 30.0% |
| AGAATGATCTGTTAAATCCT+GGG | - | tig0020435:118164-118183 | Msa1381530:intron | 30.0% | |
| TACTGGCAATTTACATCTTA+AGG | + | tig0020435:118606-118625 | None:intergenic | 30.0% | |
| ! | TTTTCTTCAACCTTAAACTG+AGG | - | tig0020435:118727-118746 | Msa1381530:intron | 30.0% |
| ! | GCCAATTATTGACTATGATT+TGG | - | tig0020435:116590-116609 | Msa1381530:intron | 30.0% |
| GCCAAATCATAGTCAATAAT+TGG | + | tig0020435:116594-116613 | None:intergenic | 30.0% | |
| GCAACGTTATATTTCCTAAT+TGG | - | tig0020435:118841-118860 | Msa1381530:intron | 30.0% | |
| AATATAGTCACAAGCCAATT+AGG | + | tig0020435:118858-118877 | None:intergenic | 30.0% | |
| !!! | TTCAACTGTTTTTTCCAGTT+TGG | - | tig0020435:118910-118929 | Msa1381530:intron | 30.0% |
| ! | CCGTACATTTAAAACTATAC+TGG | + | tig0020435:119106-119125 | None:intergenic | 30.0% |
| TTAAGCCTTACAACTATCTT+AGG | + | tig0020435:119250-119269 | None:intergenic | 30.0% | |
| CCTCAAAGACAATTGTAAAA+TGG | + | tig0020435:120186-120205 | None:intergenic | 30.0% | |
| ! | CCATTTTACAATTGTCTTTG+AGG | - | tig0020435:120183-120202 | Msa1381530:intron | 30.0% |
| ACCTCATAAACGTAACAATA+TGG | - | tig0020435:120261-120280 | Msa1381530:intron | 30.0% | |
| ACCATATTGTTACGTTTATG+AGG | + | tig0020435:120265-120284 | None:intergenic | 30.0% | |
| ! | GTAACAATATGGTGATTTGT+AGG | - | tig0020435:120272-120291 | Msa1381530:intron | 30.0% |
| CTATAATTGAAAATGTGTGC+TGG | - | tig0020435:120298-120317 | Msa1381530:intron | 30.0% | |
| TGCTGTCAATAGAAAAACAT+TGG | + | tig0020435:120451-120470 | None:intergenic | 30.0% | |
| !! | AAAAAAGCATTAGCTTCCAT+AGG | - | tig0020435:120693-120712 | Msa1381530:intron | 30.0% |
| ! | CAAAATTTGAAACTCACTTG+AGG | + | tig0020435:120858-120877 | None:intergenic | 30.0% |
| ! | CTCAAGTGAGTTTCAAATTT+TGG | - | tig0020435:120856-120875 | Msa1381530:intron | 30.0% |
| TTGATCATCAAATAGTTGGT+TGG | - | tig0020435:120904-120923 | Msa1381530:intron | 30.0% | |
| !! | ATCTACTTATTTTCTCCTTG+GGG | - | tig0020435:121511-121530 | Msa1381530:intron | 30.0% |
| !!! | ATTGATTACTTTTTACCCCA+AGG | + | tig0020435:121529-121548 | None:intergenic | 30.0% |
| AAAAGTAATCAATCTTCGTG+GGG | - | tig0020435:121536-121555 | Msa1381530:intron | 30.0% | |
| ! | ATAATGTATTTTCCCCAAGA+AGG | + | tig0020435:121577-121596 | None:intergenic | 30.0% |
| GAAAATACATTATCAACCCT+TGG | - | tig0020435:121584-121603 | Msa1381530:intron | 30.0% | |
| CAGATTTAAATTTAGCCCAA+GGG | + | tig0020435:121603-121622 | None:intergenic | 30.0% | |
| ACAGATTTAAATTTAGCCCA+AGG | + | tig0020435:121604-121623 | None:intergenic | 30.0% | |
| TGGATAAAAAGAACTTCTTG+TGG | + | tig0020435:121635-121654 | None:intergenic | 30.0% | |
| ! | CAAGAAGTTCTTTTTATCCA+CGG | - | tig0020435:121635-121654 | Msa1381530:intron | 30.0% |
| ! | ACAGGTTTAAAATTATCCCA+AGG | - | tig0020435:121682-121701 | Msa1381530:intron | 30.0% |
| ! | CAGGTTTAAAATTATCCCAA+GGG | - | tig0020435:121683-121702 | Msa1381530:intron | 30.0% |
| !! | AAAAGGTGATCAATTTTGGT+CGG | + | tig0020435:121747-121766 | None:intergenic | 30.0% |
| !! | AATATTCTCTTTGGGGTAAA+AGG | + | tig0020435:121764-121783 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTGACCACATTAA+TGG | + | tig0020435:121917-121936 | None:intergenic | 30.0% |
| AAAATTTGGTAGAAAACGTG+TGG | - | tig0020435:121939-121958 | Msa1381530:intron | 30.0% | |
| !!! | CTGAAGAACAAACGTTTTTT+TGG | + | tig0020435:121992-122011 | None:intergenic | 30.0% |
| !! | TGATCCATTTGATGATGTTT+AGG | - | tig0020435:122243-122262 | Msa1381530:intron | 30.0% |
| !! | ATCAATAGATAATGGGCTTT+AGG | - | tig0020435:122280-122299 | Msa1381530:intron | 30.0% |
| !! | TCAATAGATAATGGGCTTTA+GGG | - | tig0020435:122281-122300 | Msa1381530:intron | 30.0% |
| TTTGTGTAGAAACATAGTGT+AGG | - | tig0020435:122316-122335 | Msa1381530:intron | 30.0% | |
| GAAATTAGAACACACTTACT+TGG | + | tig0020435:122515-122534 | None:intergenic | 30.0% | |
| CAATTGATATATGTGATACG+TGG | - | tig0020435:122728-122747 | Msa1381530:intron | 30.0% | |
| TTCATAAGGCAATCGATTAT+TGG | + | tig0020435:122869-122888 | None:intergenic | 30.0% | |
| TTTATCACATCATAGCATCA+AGG | - | tig0020435:122960-122979 | Msa1381530:intron | 30.0% | |
| CAGTTACTATATCAATCAGT+TGG | - | tig0020435:123156-123175 | Msa1381530:intron | 30.0% | |
| ACTATATCAATCAGTTGGAT+CGG | - | tig0020435:123161-123180 | Msa1381530:intron | 30.0% | |
| TAAAGCAATGTGTTACCAAA+GGG | - | tig0020435:123407-123426 | Msa1381530:intron | 30.0% | |
| ! | ATCTGATACTCTTTTCACTT+TGG | - | tig0020435:123638-123657 | Msa1381530:intron | 30.0% |
| GTATTATTTGGGCTGATATA+TGG | - | tig0020435:123660-123679 | Msa1381530:intron | 30.0% | |
| !! | AGAGTTGATTGTTTTCTTTG+TGG | - | tig0020435:123937-123956 | Msa1381530:CDS | 30.0% |
| TCCTTCTTCTGTTAAGTTTA+TGG | - | tig0020435:124098-124117 | Msa1381530:intron | 30.0% | |
| TCCATAAACTTAACAGAAGA+AGG | + | tig0020435:124102-124121 | None:intergenic | 30.0% | |
| TTTGTACTCTTAAGTTTGAG+TGG | - | tig0020435:124147-124166 | Msa1381530:intron | 30.0% | |
| AGTGACAAACACAAATCAAA+AGG | + | tig0020435:124313-124332 | None:intergenic | 30.0% | |
| ! | TATTTTATCTCAAATCCGGA+AGG | - | tig0020435:124459-124478 | Msa1381530:intron | 30.0% |
| !!! | AGGATTTGATTTGATTTTGG+TGG | - | tig0020435:124528-124547 | Msa1381530:intron | 30.0% |
| TTGTGAGATATATATTCCCA+AGG | - | tig0020435:124667-124686 | Msa1381530:intron | 30.0% | |
| TGAGCATTCAAATAAGAACA+AGG | + | tig0020435:124846-124865 | None:intergenic | 30.0% | |
| CTTATTTGAATGCTCAATTG+TGG | - | tig0020435:124850-124869 | Msa1381530:intron | 30.0% | |
| !! | GAGTCTTTCTTTTGCTATAT+TGG | - | tig0020435:124953-124972 | Msa1381530:intron | 30.0% |
| AAAGAAAATTCCGCACAATT+TGG | + | tig0020435:125004-125023 | None:intergenic | 30.0% | |
| CTATATTCTCTATCACACAA+TGG | + | tig0020435:125193-125212 | None:intergenic | 30.0% | |
| TATTATGGAGACTTACATTG+AGG | - | tig0020435:125331-125350 | Msa1381530:intron | 30.0% | |
| ! | CTTTTGTCTTTTATCCTCAA+TGG | - | tig0020435:125393-125412 | Msa1381530:intron | 30.0% |
| !! | ACATTTTGTTTCATACAACG+CGG | + | tig0020435:125582-125601 | None:intergenic | 30.0% |
| ! | GCAAGAAATTCTTTTTGCAT+AGG | + | tig0020435:125694-125713 | None:intergenic | 30.0% |
| ! | AGAATTTCTTGCGTTGATAT+CGG | - | tig0020435:125702-125721 | Msa1381530:intron | 30.0% |
| TTCCATCAATCAATCAATAG+AGG | + | tig0020435:125751-125770 | None:intergenic | 30.0% | |
| AAAATGCAATAACCACCTTT+GGG | + | tig0020435:125825-125844 | None:intergenic | 30.0% | |
| TAAAATGCAATAACCACCTT+TGG | + | tig0020435:125826-125845 | None:intergenic | 30.0% | |
| TTCAGAAATTTGTCACCTTT+GGG | + | tig0020435:125910-125929 | None:intergenic | 30.0% | |
| ATTCAGAAATTTGTCACCTT+TGG | + | tig0020435:125911-125930 | None:intergenic | 30.0% | |
| ATAAACAAGCTATCACAATG+AGG | + | tig0020435:126032-126051 | None:intergenic | 30.0% | |
| CTCAAATGAGTTAATCAATG+AGG | + | tig0020435:126167-126186 | None:intergenic | 30.0% | |
| ! | CTCATTGATTAACTCATTTG+AGG | - | tig0020435:126165-126184 | Msa1381530:intron | 30.0% |
| !! | GATTAACTCATTTGAGGTTT+TGG | - | tig0020435:126171-126190 | Msa1381530:intron | 30.0% |
| ! | TAAGATTTGGAGTTATCTCT+AGG | - | tig0020435:126396-126415 | Msa1381530:intron | 30.0% |
| ! | TGAAATAACCTTTTGGTAAG+TGG | - | tig0020435:126434-126453 | Msa1381530:intron | 30.0% |
| ! | GAAATAACCTTTTGGTAAGT+GGG | - | tig0020435:126435-126454 | Msa1381530:intron | 30.0% |
| ! | AGTTAAAGTATCTGACCATA+TGG | - | tig0020435:126470-126489 | Msa1381530:intron | 30.0% |
| !! | AGGAATAACTTTGAAGTTAG+TGG | - | tig0020435:126550-126569 | Msa1381530:intron | 30.0% |
| !! | GGAATAACTTTGAAGTTAGT+GGG | - | tig0020435:126551-126570 | Msa1381530:intron | 30.0% |
| !!! | TGTTTTAGTTTTACTCTTGG+AGG | - | tig0020435:126741-126760 | Msa1381530:intron | 30.0% |
| AACTATCAACAAAAGATCCA+GGG | + | tig0020435:126857-126876 | None:intergenic | 30.0% | |
| AAACTATCAACAAAAGATCC+AGG | + | tig0020435:126858-126877 | None:intergenic | 30.0% | |
| CACTTGGATCATATTTATTG+GGG | - | tig0020435:126988-127007 | Msa1381530:intron | 30.0% | |
| GATCATATTTATTGGGGAAA+GGG | - | tig0020435:126994-127013 | Msa1381530:intron | 30.0% | |
| ! | GGATCATCAAACTTTAAGAA+AGG | + | tig0020435:127049-127068 | None:intergenic | 30.0% |
| ! | TTCTTAAAGTTTGATGATCC+AGG | - | tig0020435:127049-127068 | Msa1381530:intron | 30.0% |
| GAACAATTAATGTCAAGGTT+AGG | + | tig0020435:127225-127244 | None:intergenic | 30.0% | |
| AACAATGAACCTAAGTCATT+TGG | + | tig0020435:127254-127273 | None:intergenic | 30.0% | |
| ! | GTGAATTCTTTTGATGCATT+TGG | - | tig0020435:127305-127324 | Msa1381530:intron | 30.0% |
| ! | TTTTGATGCATTTGGTTAGT+GGG | - | tig0020435:127313-127332 | Msa1381530:intron | 30.0% |
| TCCAAAATAATGTTAACAGC+CGG | + | tig0020435:127592-127611 | None:intergenic | 30.0% | |
| TTAAAGCCAGAGAAATTATG+CGG | + | tig0020435:127716-127735 | None:intergenic | 30.0% | |
| GAGAAATCACACAATTTCTT+TGG | - | tig0020435:127745-127764 | Msa1381530:intron | 30.0% | |
| GGGAAATCACATAATTTCTT+TGG | - | tig0020435:127782-127801 | Msa1381530:intron | 30.0% | |
| GAGAAATCACATAAATTCTC+TGG | - | tig0020435:127857-127876 | Msa1381530:intron | 30.0% | |
| !! | ACATAAATTCTCTGGCTTTA+AGG | - | tig0020435:127865-127884 | Msa1381530:intron | 30.0% |
| ! | ATTGGTGATATTTGTAACCA+TGG | - | tig0020435:127992-128011 | Msa1381530:intron | 30.0% |
| AACTGAATGATATCGAATCA+TGG | + | tig0020435:128051-128070 | None:intergenic | 30.0% | |
| GATATCATTCAGTTCTTAGT+TGG | - | tig0020435:128057-128076 | Msa1381530:intron | 30.0% | |
| ! | CTTTATTAAGTGTTGCATCA+TGG | - | tig0020435:128087-128106 | Msa1381530:intron | 30.0% |
| !! | TGATCCATTTGATGATGTTT+AGG | - | tig0020435:122243-122262 | Msa1381530:intron | 30.0% |
| !! | ATCAATAGATAATGGGCTTT+AGG | - | tig0020435:122280-122299 | Msa1381530:intron | 30.0% |
| !! | TCAATAGATAATGGGCTTTA+GGG | - | tig0020435:122281-122300 | Msa1381530:intron | 30.0% |
| TTTGTGTAGAAACATAGTGT+AGG | - | tig0020435:122316-122335 | Msa1381530:intron | 30.0% | |
| GAAATTAGAACACACTTACT+TGG | + | tig0020435:122515-122534 | None:intergenic | 30.0% | |
| TTACAGGTTTGATTCCTAAT+TGG | - | tig0020435:128659-128678 | Msa1381530:intron | 30.0% | |
| TTTATCAGTGCAATCTTACT+TGG | - | tig0020435:129067-129086 | Msa1381530:intron | 30.0% | |
| ! | AGCGTACAAATTTTCCTATT+TGG | - | tig0020435:129092-129111 | Msa1381530:intron | 30.0% |
| GGCAGCATTATATTTAACAT+AGG | - | tig0020435:129180-129199 | Msa1381530:intron | 30.0% | |
| TTTGAGAATATCTGCATGTA+TGG | - | tig0020435:129354-129373 | Msa1381530:intron | 30.0% | |
| TTGAGAATATCTGCATGTAT+GGG | - | tig0020435:129355-129374 | Msa1381530:intron | 30.0% | |
| TATTATCTGCAAGTGTTAGA+AGG | - | tig0020435:129399-129418 | Msa1381530:CDS | 30.0% | |
| !! | GTTTTATTATTGCCTAGTCA+TGG | - | tig0020435:129428-129447 | Msa1381530:CDS | 30.0% |
| TGACTGTATCGGGTAAAATA+AGG | - | tig0020435:115198-115217 | Msa1381530:three_prime_UTR | 35.0% | |
| CATTTCTTGTGGAAATCAGA+TGG | - | tig0020435:115293-115312 | Msa1381530:three_prime_UTR | 35.0% | |
| GGATCGTCTTATATTTGAAC+TGG | - | tig0020435:115774-115793 | Msa1381530:intron | 35.0% | |
| GTTATGCAGGAAATGGAATT+TGG | - | tig0020435:115831-115850 | Msa1381530:intron | 35.0% | |
| GAGATGCAGTAACTAAACAT+TGG | - | tig0020435:116167-116186 | Msa1381530:intron | 35.0% | |
| CTCATAAGCGCATATGTATA+AGG | - | tig0020435:116224-116243 | Msa1381530:intron | 35.0% | |
| ! | TTTTCTGTTTGCTTCAGGTA+TGG | - | tig0020435:116503-116522 | Msa1381530:intron | 35.0% |
| AAGCAACAACACTATCAATG+TGG | + | tig0020435:116788-116807 | None:intergenic | 35.0% | |
| TCCCATGAATAAGGTTCATA+TGG | - | tig0020435:117074-117093 | Msa1381530:intron | 35.0% | |
| CCCATATGAACCTTATTCAT+GGG | + | tig0020435:117078-117097 | None:intergenic | 35.0% | |
| CCCATGAATAAGGTTCATAT+GGG | - | tig0020435:117075-117094 | Msa1381530:intron | 35.0% | |
| ACCCATATGAACCTTATTCA+TGG | + | tig0020435:117079-117098 | None:intergenic | 35.0% | |
| AATTTCATATCCCTTATGGG+TGG | - | tig0020435:117236-117255 | Msa1381530:intron | 35.0% | |
| AAATCATACACCACCCATAA+GGG | + | tig0020435:117249-117268 | None:intergenic | 35.0% | |
| AAGTACTATCATTCTAGCAC+TGG | - | tig0020435:117502-117521 | Msa1381530:intron | 35.0% | |
| TGTGCTCAAAGAAATCAAGT+GGG | + | tig0020435:117784-117803 | None:intergenic | 35.0% | |
| ATGTGCTCAAAGAAATCAAG+TGG | + | tig0020435:117785-117804 | None:intergenic | 35.0% | |
| TCCTTCAATTTACCAAGTCA+AGG | - | tig0020435:117812-117831 | Msa1381530:intron | 35.0% | |
| CCTTCAATTTACCAAGTCAA+GGG | - | tig0020435:117813-117832 | Msa1381530:intron | 35.0% | |
| TCCAGTCTCTAATGATATGA+GGG | + | tig0020435:117986-118005 | None:intergenic | 35.0% | |
| TTAACAGATCATTCTCGATG+TGG | + | tig0020435:118159-118178 | None:intergenic | 35.0% | |
| GAGAATGATCTGTTAAATCC+TGG | - | tig0020435:118163-118182 | Msa1381530:intron | 35.0% | |
| GAATGATCTGTTAAATCCTG+GGG | - | tig0020435:118165-118184 | Msa1381530:intron | 35.0% | |
| AATGATCTGTTAAATCCTGG+GGG | - | tig0020435:118166-118185 | Msa1381530:intron | 35.0% | |
| ! | AGATGTTGATAGAGTTGTGT+CGG | - | tig0020435:118317-118336 | Msa1381530:intron | 35.0% |
| TTTACATCTTAAGGTGCGTT+TGG | + | tig0020435:118597-118616 | None:intergenic | 35.0% | |
| ! | TTTTCTGTTTGCTTCAGGTA+TGG | - | tig0020435:116503-116522 | Msa1381530:intron | 35.0% |
| ATTCAACCTATGCTTATGCT+TGG | - | tig0020435:118798-118817 | Msa1381530:intron | 35.0% | |
| AGAAAACAAGAATGCCAAAC+TGG | + | tig0020435:118927-118946 | None:intergenic | 35.0% | |
| ! | AATGCTTTAGTTGATATGCC+TGG | + | tig0020435:118989-119008 | None:intergenic | 35.0% |
| AAACAAACACTTCTTGGAGA+TGG | + | tig0020435:119179-119198 | None:intergenic | 35.0% | |
| !! | TCCAAGAAGTGTTTGTTTAG+TGG | - | tig0020435:119181-119200 | Msa1381530:intron | 35.0% |
| ACCACTAAACAAACACTTCT+TGG | + | tig0020435:119185-119204 | None:intergenic | 35.0% | |
| TTTCATAAACTCAAGGAGCA+TGG | - | tig0020435:119213-119232 | Msa1381530:intron | 35.0% | |
| ! | TCGCAACTTTGGAAAAGTTA+GGG | + | tig0020435:119287-119306 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTGGAAAAGTT+AGG | + | tig0020435:119288-119307 | None:intergenic | 35.0% |
| ! | CTTTTCCAAAGTTGCGATTT+TGG | - | tig0020435:119290-119309 | Msa1381530:intron | 35.0% |
| CTACAGTTGCAAAACTTAGA+GGG | - | tig0020435:119466-119485 | Msa1381530:intron | 35.0% | |
| AGCCTGTCTTGATTAATTCT+AGG | - | tig0020435:119941-119960 | Msa1381530:intron | 35.0% | |
| CTCCTAGAATTAATCAAGAC+AGG | + | tig0020435:119946-119965 | None:intergenic | 35.0% | |
| CTGTCTTGATTAATTCTAGG+AGG | - | tig0020435:119944-119963 | Msa1381530:intron | 35.0% | |
| AAAAGACGAGGTACATAAAG+TGG | - | tig0020435:120151-120170 | Msa1381530:intron | 35.0% | |
| TGGAACTTCTAGCATTTGTT+TGG | - | tig0020435:120318-120337 | Msa1381530:intron | 35.0% | |
| GGAACTTCTAGCATTTGTTT+GGG | - | tig0020435:120319-120338 | Msa1381530:intron | 35.0% | |
| TACATGTTCAACAGCGTATT+GGG | - | tig0020435:120483-120502 | Msa1381530:intron | 35.0% | |
| !! | TTGGGTATTGAACTTCTTAC+AGG | - | tig0020435:120501-120520 | Msa1381530:intron | 35.0% |
| TGCAGATTCCAATCTCATTT+GGG | - | tig0020435:120634-120653 | Msa1381530:intron | 35.0% | |
| ! | ATTTGGGGTAACTGTATATG+AGG | - | tig0020435:120650-120669 | Msa1381530:intron | 35.0% |
| TAGCTGTAAATTCTTTCCCT+TGG | + | tig0020435:120722-120741 | None:intergenic | 35.0% | |
| ! | CTATTGTGTTATTGCCTTAC+TGG | - | tig0020435:120755-120774 | Msa1381530:intron | 35.0% |
| ! | ATTTGAAACTCACTTGAGGA+GGG | + | tig0020435:120854-120873 | None:intergenic | 35.0% |
| ! | AATTTGAAACTCACTTGAGG+AGG | + | tig0020435:120855-120874 | None:intergenic | 35.0% |
| !!! | CTGCAATCAATTGTTGGTTT+TGG | - | tig0020435:120959-120978 | Msa1381530:intron | 35.0% |
| GTTTCTGCGGTTAAAAAAAC+AGG | - | tig0020435:121664-121683 | Msa1381530:intron | 35.0% | |
| !! | AAAGGTGATCAATTTTGGTC+GGG | + | tig0020435:121746-121765 | None:intergenic | 35.0% |
| ! | GGGTAAAAGGTGATCAATTT+TGG | + | tig0020435:121751-121770 | None:intergenic | 35.0% |
| TAGTATGGTGTGAGGAATTA+GGG | - | tig0020435:121841-121860 | Msa1381530:intron | 35.0% | |
| !! | AAGTATGGAGGGGTATTTAT+AGG | - | tig0020435:121864-121883 | Msa1381530:intron | 35.0% |
| GGTGGTAAATACCATTAATG+TGG | - | tig0020435:121903-121922 | Msa1381530:intron | 35.0% | |
| !!! | ACAAACGTTTTTTTGGTCTG+TGG | + | tig0020435:121985-122004 | None:intergenic | 35.0% |
| ! | AACTAACGCAAGGGTATATT+TGG | - | tig0020435:122155-122174 | Msa1381530:intron | 35.0% |
| GTGGAGAGCAAATTTCAAAA+CGG | - | tig0020435:122210-122229 | Msa1381530:intron | 35.0% | |
| TTGCACGGTTATAAATAGAG+AGG | - | tig0020435:122375-122394 | Msa1381530:intron | 35.0% | |
| TTGACTATTCTGCTCATTAG+CGG | - | tig0020435:122420-122439 | Msa1381530:intron | 35.0% | |
| ! | CAAACTTAGGGTTTTCAAAG+GGG | + | tig0020435:122450-122469 | None:intergenic | 35.0% |
| ! | CCAAACTTAGGGTTTTCAAA+GGG | + | tig0020435:122451-122470 | None:intergenic | 35.0% |
| ! | TCCAAACTTAGGGTTTTCAA+AGG | + | tig0020435:122452-122471 | None:intergenic | 35.0% |
| TTTCACATGCTCCAAACTTA+GGG | + | tig0020435:122462-122481 | None:intergenic | 35.0% | |
| ACAATCGAAATTAGGGTTCA+TGG | + | tig0020435:122651-122670 | None:intergenic | 35.0% | |
| TACGGTATCCATATATGCTT+CGG | - | tig0020435:122685-122704 | Msa1381530:intron | 35.0% | |
| TCACTTAACCGAAGCATATA+TGG | + | tig0020435:122696-122715 | None:intergenic | 35.0% | |
| ! | TATGTGTGACTTGAGTATTG+AGG | - | tig0020435:122904-122923 | Msa1381530:intron | 35.0% |
| GTGTATGTCTTTGGTATGAA+TGG | - | tig0020435:123041-123060 | Msa1381530:intron | 35.0% | |
| ! | AGTTGGATCGGTTAAAGTTT+TGG | - | tig0020435:123173-123192 | Msa1381530:intron | 35.0% |
| CTAAAGCAATGTGTTACCAA+AGG | - | tig0020435:123406-123425 | Msa1381530:intron | 35.0% | |
| ATATCCACAAGATATCCCTT+TGG | + | tig0020435:123425-123444 | None:intergenic | 35.0% | |
| CAAGTACTATGAAATGGACA+TGG | - | tig0020435:123512-123531 | Msa1381530:intron | 35.0% | |
| TTCCTATTGTTGTATGTGCT+CGG | - | tig0020435:123869-123888 | Msa1381530:CDS | 35.0% | |
| TGGCTACTCAAAATTGTCTT+TGG | + | tig0020435:124255-124274 | None:intergenic | 35.0% | |
| !!! | CATTTGTTTTTGTCGCCAAA+AGG | - | tig0020435:124347-124366 | Msa1381530:intron | 35.0% |
| TTAATCATGGTGTTTCCTTC+CGG | + | tig0020435:124477-124496 | None:intergenic | 35.0% | |
| TGAACATATGCCAAATTGTG+CGG | - | tig0020435:124991-125010 | Msa1381530:intron | 35.0% | |
| GCTTAATGACTCTACATACA+AGG | - | tig0020435:125035-125054 | Msa1381530:intron | 35.0% | |
| ! | TTGTCTTTTATCCTCAATGG+TGG | - | tig0020435:125396-125415 | Msa1381530:intron | 35.0% |
| CATCAATCAATCAATAGAGG+CGG | + | tig0020435:125748-125767 | None:intergenic | 35.0% | |
| ! | TTGGAGAATGTTCTGAACTA+AGG | - | tig0020435:125874-125893 | Msa1381530:CDS | 35.0% |
| ! | CTCATTGATTAACTTACCTG+AGG | - | tig0020435:125941-125960 | Msa1381530:CDS | 35.0% |
| CTTTAGGCAGACAAATTCTT+TGG | + | tig0020435:126118-126137 | None:intergenic | 35.0% | |
| CAAAGAATTTGTCTGCCTAA+AGG | - | tig0020435:126116-126135 | Msa1381530:intron | 35.0% | |
| CTTGAGAAATTGTCACCTTT+AGG | + | tig0020435:126134-126153 | None:intergenic | 35.0% | |
| TTAGACACATGGAAACCATA+TGG | + | tig0020435:126488-126507 | None:intergenic | 35.0% | |
| CTTTCACGTAACCTTCATTT+AGG | - | tig0020435:126682-126701 | Msa1381530:intron | 35.0% | |
| ACACGTTTCATCCTAAATGA+AGG | + | tig0020435:126696-126715 | None:intergenic | 35.0% | |
| AAAACAAAGTTGCTCCAACA+AGG | + | tig0020435:126727-126746 | None:intergenic | 35.0% | |
| TGCTATAAGGTCTAATGTTG+AGG | - | tig0020435:126938-126957 | Msa1381530:intron | 35.0% | |
| GGATCATATTTATTGGGGAA+AGG | - | tig0020435:126993-127012 | Msa1381530:intron | 35.0% | |
| CTCCCAACTCCTATAATTTA+TGG | - | tig0020435:127169-127188 | Msa1381530:intron | 35.0% | |
| ! | CTTTTGATGCATTTGGTTAG+TGG | - | tig0020435:127312-127331 | Msa1381530:intron | 35.0% |
| AAATTATAGCTCAGTGTTGC+AGG | - | tig0020435:127480-127499 | Msa1381530:intron | 35.0% | |
| AATTATAGCTCAGTGTTGCA+GGG | - | tig0020435:127481-127500 | Msa1381530:intron | 35.0% | |
| AATTTGAGCTCAATGTTGAC+AGG | - | tig0020435:127557-127576 | Msa1381530:intron | 35.0% | |
| TCCAAAATAGTGTCAATCAC+CGG | + | tig0020435:127667-127686 | None:intergenic | 35.0% | |
| !! | GCATAATTTCTCTGGCTTTA+AGG | - | tig0020435:127715-127734 | Msa1381530:intron | 35.0% |
| !! | TCTTTGGCTTTAAGCATTTG+AGG | - | tig0020435:127761-127780 | Msa1381530:intron | 35.0% |
| !! | CTTTGGCTTTAAGCATTTGA+GGG | - | tig0020435:127762-127781 | Msa1381530:intron | 35.0% |
| !! | TAAGGCATTGAGAGAAATTG+AGG | - | tig0020435:127883-127902 | Msa1381530:intron | 35.0% |
| GTGATATTTGTAACCATGGA+AGG | - | tig0020435:127996-128015 | Msa1381530:intron | 35.0% | |
| AATTGATACAACACCTTCCA+TGG | + | tig0020435:128012-128031 | None:intergenic | 35.0% | |
| !! | GGAAGGTGTTGTATCAATTA+AGG | - | tig0020435:128013-128032 | Msa1381530:intron | 35.0% |
| TGAATGATATCGAATCATGG+CGG | + | tig0020435:128048-128067 | None:intergenic | 35.0% | |
| TCATTCAGTTCTTAGTTGGA+CGG | - | tig0020435:128061-128080 | Msa1381530:intron | 35.0% | |
| TGATAACAAACTTCCTAACG+TGG | + | tig0020435:128126-128145 | None:intergenic | 35.0% | |
| !! | ACAATTGATTTTGCCCAAGT+GGG | - | tig0020435:128207-128226 | Msa1381530:intron | 35.0% |
| ATTCTAACATTCTCCCACTT+GGG | + | tig0020435:128223-128242 | None:intergenic | 35.0% | |
| AATTCTAACATTCTCCCACT+TGG | + | tig0020435:128224-128243 | None:intergenic | 35.0% | |
| !!! | CTGCAATCAATTGTTGGTTT+TGG | - | tig0020435:120959-120978 | Msa1381530:intron | 35.0% |
| TTGCACGGTTATAAATAGAG+AGG | - | tig0020435:122375-122394 | Msa1381530:intron | 35.0% | |
| ! | CAAACTTAGGGTTTTCAATG+GGG | + | tig0020435:128518-128537 | None:intergenic | 35.0% |
| ! | CCAAACTTAGGGTTTTCAAT+GGG | + | tig0020435:128519-128538 | None:intergenic | 35.0% |
| ! | TCCAAACTTAGGGTTTTCAA+TGG | + | tig0020435:122452-122471 | None:intergenic | 35.0% |
| TTTCACATGCTCCAAACTTA+GGG | + | tig0020435:122462-122481 | None:intergenic | 35.0% | |
| GAACTTCTAACTTACTCCTT+CGG | - | tig0020435:128810-128829 | Msa1381530:CDS | 35.0% | |
| CAGAAAATATTGTCCAACCA+AGG | + | tig0020435:128984-129003 | None:intergenic | 35.0% | |
| CTTGTCTTCAAACTTAGTTG+AGG | - | tig0020435:129159-129178 | Msa1381530:intron | 35.0% | |
| ! | TTCATTTTATTAGGCGGAGT+TGG | - | tig0020435:129285-129304 | Msa1381530:intron | 35.0% |
| TTGTGGAAATCAGATGGATC+CGG | - | tig0020435:115299-115318 | Msa1381530:exon | 40.0% | |
| ! | AATTTGGGTGGCGAATGTTT+TGG | - | tig0020435:115847-115866 | Msa1381530:intron | 40.0% |
| ! | ATTTGGGTGGCGAATGTTTT+GGG | - | tig0020435:115848-115867 | Msa1381530:intron | 40.0% |
| GAGATAGCCGTAGATGATTT+AGG | + | tig0020435:115974-115993 | None:intergenic | 40.0% | |
| ACTAATCACTATTGCAGTGC+TGG | + | tig0020435:116317-116336 | None:intergenic | 40.0% | |
| ! | TACGGTTTTCTGTTTGCTTC+AGG | - | tig0020435:116498-116517 | Msa1381530:intron | 40.0% |
| AGGTAGGATGCCTCAATTTA+AGG | + | tig0020435:116563-116582 | None:intergenic | 40.0% | |
| ! | TAAATTGAGGCATCCTACCT+TGG | - | tig0020435:116563-116582 | Msa1381530:intron | 40.0% |
| ATAATTGGCATGTCCAAGGT+AGG | + | tig0020435:116579-116598 | None:intergenic | 40.0% | |
| GTCAATAATTGGCATGTCCA+AGG | + | tig0020435:116583-116602 | None:intergenic | 40.0% | |
| AGCTACTAAACAAAACCCCT+TGG | - | tig0020435:116962-116981 | Msa1381530:intron | 40.0% | |
| GCTACTAAACAAAACCCCTT+GGG | - | tig0020435:116963-116982 | Msa1381530:intron | 40.0% | |
| GATCTCCAATCACAAAGGTT+GGG | + | tig0020435:117056-117075 | None:intergenic | 40.0% | |
| GATTGGAGATCCCATGAATA+AGG | - | tig0020435:117065-117084 | Msa1381530:intron | 40.0% | |
| CTAGACACTGCATTATTGAG+AGG | - | tig0020435:117190-117209 | Msa1381530:intron | 40.0% | |
| CAAATCATACACCACCCATA+AGG | + | tig0020435:117250-117269 | None:intergenic | 40.0% | |
| GAGCACTCATGAAATAATCC+AGG | - | tig0020435:117345-117364 | Msa1381530:intron | 40.0% | |
| ACTTCATTGGGTTAACATCC+TGG | + | tig0020435:117565-117584 | None:intergenic | 40.0% | |
| CAATATATGACCAAAGGGGT+TGG | + | tig0020435:117740-117759 | None:intergenic | 40.0% | |
| CAACCCCTTTGGTCATATAT+TGG | - | tig0020435:117738-117757 | Msa1381530:intron | 40.0% | |
| !! | CCCTTGACTTGGTAAATTGA+AGG | + | tig0020435:117816-117835 | None:intergenic | 40.0% |
| CCAGTCTCTAATGATATGAG+GGG | + | tig0020435:117985-118004 | None:intergenic | 40.0% | |
| GTCCAGTCTCTAATGATATG+AGG | + | tig0020435:117987-118006 | None:intergenic | 40.0% | |
| ATGATCTGTTAAATCCTGGG+GGG | - | tig0020435:118167-118186 | Msa1381530:intron | 40.0% | |
| AACTACGCGGAAAATCCTTA+AGG | - | tig0020435:118199-118218 | Msa1381530:intron | 40.0% | |
| !! | TTGAAAGTTGATTCGGTAGC+AGG | - | tig0020435:118277-118296 | Msa1381530:intron | 40.0% |
| ATTCGGTAGCAGGTTTGATT+TGG | - | tig0020435:118287-118306 | Msa1381530:intron | 40.0% | |
| ACTAATCACTATTGCAGTGC+TGG | + | tig0020435:116317-116336 | None:intergenic | 40.0% | |
| ! | TACGGTTTTCTGTTTGCTTC+AGG | - | tig0020435:116498-116517 | Msa1381530:intron | 40.0% |
| TTTGCTTCAGGTATGGTCAT+GGG | - | tig0020435:118687-118706 | Msa1381530:intron | 40.0% | |
| ATAATTGGCATGTCCAAGGT+AGG | + | tig0020435:116579-116598 | None:intergenic | 40.0% | |
| GTCAATAATTGGCATGTCCA+AGG | + | tig0020435:116583-116602 | None:intergenic | 40.0% | |
| CTGATTCCAAGCATAAGCAT+AGG | + | tig0020435:118807-118826 | None:intergenic | 40.0% | |
| CTTATGCTTGGAATCAGCAT+TGG | - | tig0020435:118810-118829 | Msa1381530:intron | 40.0% | |
| ! | TCTTTAAAGGGGTTGAGACA+TGG | - | tig0020435:119008-119027 | Msa1381530:intron | 40.0% |
| TCCTGCCTAAGATAGTTGTA+AGG | - | tig0020435:119242-119261 | Msa1381530:intron | 40.0% | |
| ! | GCAACTTTGGAAAAGTTAGG+GGG | + | tig0020435:119285-119304 | None:intergenic | 40.0% |
| ! | CGCAACTTTGGAAAAGTTAG+GGG | + | tig0020435:119286-119305 | None:intergenic | 40.0% |
| TGCCACATGTGCAAAACTTT+GGG | + | tig0020435:119345-119364 | None:intergenic | 40.0% | |
| ! | TTTTGCACATGTGGCAGTTT+TGG | - | tig0020435:119349-119368 | Msa1381530:intron | 40.0% |
| AACAAGTGGCACCTTACTTA+GGG | + | tig0020435:119416-119435 | None:intergenic | 40.0% | |
| TAACAAGTGGCACCTTACTT+AGG | + | tig0020435:119417-119436 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+AGG | - | tig0020435:119465-119484 | Msa1381530:intron | 40.0% | |
| ! | CTTTCACGAAGTTGCGATTT+TGG | + | tig0020435:119520-119539 | None:intergenic | 40.0% |
| ATCGCAACTTCGTGAAAGTT+AGG | - | tig0020435:119522-119541 | Msa1381530:intron | 40.0% | |
| TCGCAACTTCGTGAAAGTTA+GGG | - | tig0020435:119523-119542 | Msa1381530:intron | 40.0% | |
| ! | ACCAATTGTTTCTTGTCTCC+TGG | + | tig0020435:119973-119992 | None:intergenic | 40.0% |
| GAATACAAACCTCTTCCAAC+TGG | - | tig0020435:120110-120129 | Msa1381530:intron | 40.0% | |
| !!! | TCTTTTTCAGTGGCACCATT+TGG | + | tig0020435:120137-120156 | None:intergenic | 40.0% |
| !!! | ATGTACCTCGTCTTTTTCAG+TGG | + | tig0020435:120147-120166 | None:intergenic | 40.0% |
| CATTGCAGTACAGATTGCTA+AGG | - | tig0020435:120349-120368 | Msa1381530:intron | 40.0% | |
| CTACATGTTCAACAGCGTAT+TGG | - | tig0020435:120482-120501 | Msa1381530:intron | 40.0% | |
| GTGCAGATTCCAATCTCATT+TGG | - | tig0020435:120633-120652 | Msa1381530:intron | 40.0% | |
| GCAGATTCCAATCTCATTTG+GGG | - | tig0020435:120635-120654 | Msa1381530:intron | 40.0% | |
| ACAGTTACCCCAAATGAGAT+TGG | + | tig0020435:120645-120664 | None:intergenic | 40.0% | |
| AGGCAACTGCATTATTCACA+GGG | - | tig0020435:120670-120689 | Msa1381530:intron | 40.0% | |
| AAAATAGTGAGCAGCCTTCT+TGG | - | tig0020435:121560-121579 | Msa1381530:intron | 40.0% | |
| AAATAGTGAGCAGCCTTCTT+GGG | - | tig0020435:121561-121580 | Msa1381530:intron | 40.0% | |
| TCCACGGTAAAAAGTTTCTG+CGG | - | tig0020435:121651-121670 | Msa1381530:intron | 40.0% | |
| !! | AAGGTGATCAATTTTGGTCG+GGG | + | tig0020435:121745-121764 | None:intergenic | 40.0% |
| GTAGTATGGTGTGAGGAATT+AGG | - | tig0020435:121840-121859 | Msa1381530:intron | 40.0% | |
| TGTGAGGAATTAGGGAAGTA+TGG | - | tig0020435:121849-121868 | Msa1381530:intron | 40.0% | |
| ! | AGGAATTAGGGAAGTATGGA+GGG | - | tig0020435:121853-121872 | Msa1381530:intron | 40.0% |
| !! | TATGGAGGGGTATTTATAGG+TGG | - | tig0020435:121867-121886 | Msa1381530:intron | 40.0% |
| !! | ATGGAGGGGTATTTATAGGT+GGG | - | tig0020435:121868-121887 | Msa1381530:intron | 40.0% |
| ATAGGTGGGAATGGTAGTAT+AGG | - | tig0020435:121882-121901 | Msa1381530:intron | 40.0% | |
| TACGTGACTTAACTAACGCA+AGG | - | tig0020435:122145-122164 | Msa1381530:intron | 40.0% | |
| ACGTGACTTAACTAACGCAA+GGG | - | tig0020435:122146-122165 | Msa1381530:intron | 40.0% | |
| GTATATTTGGAAGCAGTGCA+GGG | - | tig0020435:122168-122187 | Msa1381530:intron | 40.0% | |
| AGGGCCTAAACATCATCAAA+TGG | + | tig0020435:122250-122269 | None:intergenic | 40.0% | |
| ATTTATAACCGTGCAACCCT+AGG | + | tig0020435:122371-122390 | None:intergenic | 40.0% | |
| CGGTTATAAATAGAGAGGCT+AGG | - | tig0020435:122380-122399 | Msa1381530:intron | 40.0% | |
| ! | ATAGTCAAAGTGATGGCGAA+GGG | + | tig0020435:122408-122427 | None:intergenic | 40.0% |
| ! | AATAGTCAAAGTGATGGCGA+AGG | + | tig0020435:122409-122428 | None:intergenic | 40.0% |
| GAGCAGAATAGTCAAAGTGA+TGG | + | tig0020435:122415-122434 | None:intergenic | 40.0% | |
| ! | CCCTTTGAAAACCCTAAGTT+TGG | - | tig0020435:122448-122467 | Msa1381530:intron | 40.0% |
| CTTTCACATGCTCCAAACTT+AGG | + | tig0020435:122463-122482 | None:intergenic | 40.0% | |
| ! | CTAAGTTTGGAGCATGTGAA+AGG | - | tig0020435:122461-122480 | Msa1381530:intron | 40.0% |
| GTGATACGTGGCCAAATATT+TGG | - | tig0020435:122740-122759 | Msa1381530:intron | 40.0% | |
| GTTACCAAAGGGATATCTTG+TGG | - | tig0020435:123418-123437 | Msa1381530:intron | 40.0% | |
| AAGAAGGAGCCACACAAAAA+TGG | + | tig0020435:124086-124105 | None:intergenic | 40.0% | |
| AGGGGATGAGCATATCATAT+TGG | - | tig0020435:125147-125166 | Msa1381530:intron | 40.0% | |
| CTTGAATTTCACCACCATTG+AGG | + | tig0020435:125410-125429 | None:intergenic | 40.0% | |
| ! | CGCCTCTATTGATTGATTGA+TGG | - | tig0020435:125746-125765 | Msa1381530:intron | 40.0% |
| ! | TAAGGATTTTGCATGCCCAA+AGG | - | tig0020435:125892-125911 | Msa1381530:CDS | 40.0% |
| !!! | ACTTACCTGAGGTTTTGACT+AGG | - | tig0020435:125952-125971 | Msa1381530:CDS | 40.0% |
| !!! | CTTACCTGAGGTTTTGACTA+GGG | - | tig0020435:125953-125972 | Msa1381530:CDS | 40.0% |
| ATAACCCTAGTCAAAACCTC+AGG | + | tig0020435:125960-125979 | None:intergenic | 40.0% | |
| TGGGCAGAATGTACAAACTA+AGG | + | tig0020435:125985-126004 | None:intergenic | 40.0% | |
| AGTTTGTACATTCTGCCCAA+AGG | - | tig0020435:125986-126005 | Msa1381530:intron | 40.0% | |
| !!! | CTCATTTGAGGTTTTGGCTA+AGG | - | tig0020435:126177-126196 | Msa1381530:intron | 40.0% |
| ! | TGACTCGTTTAAGATCTCGA+TGG | + | tig0020435:126358-126377 | None:intergenic | 40.0% |
| ACGAGTCAAACCGAAAGAAA+TGG | - | tig0020435:126370-126389 | Msa1381530:intron | 40.0% | |
| AGGAGTAATTGTGAAGTCAG+TGG | - | tig0020435:126607-126626 | Msa1381530:intron | 40.0% | |
| GGAGTAATTGTGAAGTCAGT+GGG | - | tig0020435:126608-126627 | Msa1381530:intron | 40.0% | |
| ACGTGTTTGTGTTACCTTGT+TGG | - | tig0020435:126710-126729 | Msa1381530:intron | 40.0% | |
| GATGAACAAAGGATGAAGCA+AGG | + | tig0020435:126800-126819 | None:intergenic | 40.0% | |
| TGACAATGAAAGACGAAGCA+AGG | + | tig0020435:126908-126927 | None:intergenic | 40.0% | |
| !! | TCCAAAATAGTGTCGATCAC+CGG | + | tig0020435:127516-127535 | None:intergenic | 40.0% |
| !!! | TCGACACTATTTTGGAGTTG+AGG | - | tig0020435:127520-127539 | Msa1381530:intron | 40.0% |
| TGTTGACAGGACATTTATGC+CGG | - | tig0020435:127570-127589 | Msa1381530:intron | 40.0% | |
| ! | GCCGGCTGTTAACATTATTT+TGG | - | tig0020435:127588-127607 | Msa1381530:intron | 40.0% |
| AAATTAGAGCTCAGTGTCGT+TGG | - | tig0020435:127631-127650 | Msa1381530:intron | 40.0% | |
| ! | AATTAGAGCTCAGTGTCGTT+GGG | - | tig0020435:127632-127651 | Msa1381530:intron | 40.0% |
| !!! | TTGACACTATTTTGGAGCTG+AGG | - | tig0020435:127671-127690 | Msa1381530:intron | 40.0% |
| ! | CTACACAAATGACTAGTCGA+CGG | - | tig0020435:127968-127987 | Msa1381530:intron | 40.0% |
| ! | AAATGACTAGTCGACGGAAT+TGG | - | tig0020435:127974-127993 | Msa1381530:intron | 40.0% |
| !! | CACAATTGATTTTGCCCAAG+TGG | - | tig0020435:128206-128225 | Msa1381530:intron | 40.0% |
| AGGGCCTAAACATCATCAAA+TGG | + | tig0020435:122250-122269 | None:intergenic | 40.0% | |
| ATTTATAACCGTGCAACCCT+AGG | + | tig0020435:122371-122390 | None:intergenic | 40.0% | |
| CGGTTATAAATAGAGAGGCT+AGG | - | tig0020435:122380-122399 | Msa1381530:intron | 40.0% | |
| CTGACTATTCTGCTCATTAG+CGG | - | tig0020435:128488-128507 | Msa1381530:intron | 40.0% | |
| CCCATTGAAAACCCTAAGTT+TGG | - | tig0020435:128516-128535 | Msa1381530:intron | 40.0% | |
| CTTTCACATGCTCCAAACTT+AGG | + | tig0020435:122463-122482 | None:intergenic | 40.0% | |
| ! | CTAAGTTTGGAGCATGTGAA+AGG | - | tig0020435:122461-122480 | Msa1381530:intron | 40.0% |
| GCACGACATTGAATCCAATT+AGG | + | tig0020435:128676-128695 | None:intergenic | 40.0% | |
| TTCCACAACACACATAGATG+CGG | + | tig0020435:128742-128761 | None:intergenic | 40.0% | |
| CTACATGCTGAAACGATTTC+CGG | - | tig0020435:128764-128783 | Msa1381530:CDS | 40.0% | |
| AAACGATTTCCGGTTCCTTA+TGG | - | tig0020435:128774-128793 | Msa1381530:CDS | 40.0% | |
| TGATAGATGCTCTCCCAAAT+AGG | + | tig0020435:129021-129040 | None:intergenic | 40.0% | |
| GTCAAAATCACTCCATGACT+AGG | + | tig0020435:129443-129462 | None:intergenic | 40.0% | |
| TGCAGGAAATGGAATTTGGG+TGG | - | tig0020435:115835-115854 | Msa1381530:intron | 45.0% | |
| !! | TTTGGAAGCGTTGGTGGTAT+TGG | - | tig0020435:115899-115918 | Msa1381530:intron | 45.0% |
| GTTTGCTTCAGGTATGGTCA+CGG | - | tig0020435:116509-116528 | Msa1381530:intron | 45.0% | |
| TTTGCTTCAGGTATGGTCAC+GGG | - | tig0020435:116510-116529 | Msa1381530:intron | 45.0% | |
| ATTGTGTACATCGAGGGGAT+TGG | - | tig0020435:116995-117014 | Msa1381530:intron | 45.0% | |
| TTGTGTACATCGAGGGGATT+GGG | - | tig0020435:116996-117015 | Msa1381530:intron | 45.0% | |
| GGATCTCCAATCACAAAGGT+TGG | + | tig0020435:117057-117076 | None:intergenic | 45.0% | |
| CATGGGATCTCCAATCACAA+AGG | + | tig0020435:117061-117080 | None:intergenic | 45.0% | |
| TTGTTCTCGTCCCTTTCCTA+TGG | - | tig0020435:117152-117171 | Msa1381530:intron | 45.0% | |
| CTCACACACACCATAGGAAA+GGG | + | tig0020435:117165-117184 | None:intergenic | 45.0% | |
| TCTCACACACACCATAGGAA+AGG | + | tig0020435:117166-117185 | None:intergenic | 45.0% | |
| TCACCTATGTGAGTGTCAAG+TGG | - | tig0020435:117289-117308 | Msa1381530:intron | 45.0% | |
| CACCTATGTGAGTGTCAAGT+GGG | - | tig0020435:117290-117309 | Msa1381530:intron | 45.0% | |
| ACCTATGTGAGTGTCAAGTG+GGG | - | tig0020435:117291-117310 | Msa1381530:intron | 45.0% | |
| CTGGATGTGATGCATCAAAC+TGG | + | tig0020435:117546-117565 | None:intergenic | 45.0% | |
| CAGTTTGATGCATCACATCC+AGG | - | tig0020435:117544-117563 | Msa1381530:intron | 45.0% | |
| CCCCTCATATCATTAGAGAC+TGG | - | tig0020435:117982-118001 | Msa1381530:intron | 45.0% | |
| TCATTCTCGATGTGGAATCG+AGG | + | tig0020435:118151-118170 | None:intergenic | 45.0% | |
| GTTTGCTTCAGGTATGGTCA+TGG | - | tig0020435:116509-116528 | Msa1381530:intron | 45.0% | |
| AGGTAGGATGCCTCAGTTTA+AGG | + | tig0020435:118740-118759 | None:intergenic | 45.0% | |
| ! | TAAACTGAGGCATCCTACCT+TGG | - | tig0020435:118740-118759 | Msa1381530:intron | 45.0% |
| AGGGGTTGAGACATGGAATA+AGG | - | tig0020435:119015-119034 | Msa1381530:intron | 45.0% | |
| TCGATCAACTCAAAGACACG+TGG | + | tig0020435:119156-119175 | None:intergenic | 45.0% | |
| GCCTTACAACTATCTTAGGC+AGG | + | tig0020435:119246-119265 | None:intergenic | 45.0% | |
| CCACATGTGCAAAACTTTGG+GGG | + | tig0020435:119343-119362 | None:intergenic | 45.0% | |
| GCCACATGTGCAAAACTTTG+GGG | + | tig0020435:119344-119363 | None:intergenic | 45.0% | |
| CTGCCACATGTGCAAAACTT+TGG | + | tig0020435:119346-119365 | None:intergenic | 45.0% | |
| ACCGGGTCAAAATTGGCATT+GGG | + | tig0020435:119377-119396 | None:intergenic | 45.0% | |
| CAGTTGCAAAACTTAGAGGG+CGG | - | tig0020435:119469-119488 | Msa1381530:intron | 45.0% | |
| CGCAACTTCGTGAAAGTTAG+GGG | - | tig0020435:119524-119543 | Msa1381530:intron | 45.0% | |
| GCAACTTCGTGAAAGTTAGG+GGG | - | tig0020435:119525-119544 | Msa1381530:intron | 45.0% | |
| ! | ATTAATTCTAGGAGGCTGCC+AGG | - | tig0020435:119952-119971 | Msa1381530:intron | 45.0% |
| GCCAGGAGACAAGAAACAAT+TGG | - | tig0020435:119969-119988 | Msa1381530:intron | 45.0% | |
| GAGGCAACTGCATTATTCAC+AGG | - | tig0020435:120669-120688 | Msa1381530:intron | 45.0% | |
| TTAGCTTCCATAGGTGACCA+AGG | - | tig0020435:120702-120721 | Msa1381530:intron | 45.0% | |
| TAGCTTCCATAGGTGACCAA+GGG | - | tig0020435:120703-120722 | Msa1381530:intron | 45.0% | |
| TTCTTTCCCTTGGTCACCTA+TGG | + | tig0020435:120712-120731 | None:intergenic | 45.0% | |
| ! | TGTGTTATTGCCTTACTGGC+TGG | - | tig0020435:120759-120778 | Msa1381530:intron | 45.0% |
| ! | TGTGGGCTGCAATCAATTGT+TGG | - | tig0020435:120953-120972 | Msa1381530:intron | 45.0% |
| !! | AACTAGCGCATGGCCATTTT+CGG | + | tig0020435:121050-121069 | None:intergenic | 45.0% |
| AATAGTGAGCAGCCTTCTTG+GGG | - | tig0020435:121562-121581 | Msa1381530:intron | 45.0% | |
| ! | ACCGCAGAAACTTTTTACCG+TGG | + | tig0020435:121655-121674 | None:intergenic | 45.0% |
| ! | AAGTAGTGAGTAGCCGACTT+GGG | + | tig0020435:121720-121739 | None:intergenic | 45.0% |
| AAAGTAGTGAGTAGCCGACT+TGG | + | tig0020435:121721-121740 | None:intergenic | 45.0% | |
| AATAGAGGGAGAGAGTGATG+AGG | - | tig0020435:121809-121828 | Msa1381530:intron | 45.0% | |
| ATAGAGGGAGAGAGTGATGA+GGG | - | tig0020435:121810-121829 | Msa1381530:intron | 45.0% | |
| ATGAGGGGGAGAAAGTAGTA+TGG | - | tig0020435:121826-121845 | Msa1381530:intron | 45.0% | |
| GGAGAAAGTAGTATGGTGTG+AGG | - | tig0020435:121833-121852 | Msa1381530:intron | 45.0% | |
| ! | GAGGAATTAGGGAAGTATGG+AGG | - | tig0020435:121852-121871 | Msa1381530:intron | 45.0% |
| ! | GGAATTAGGGAAGTATGGAG+GGG | - | tig0020435:121854-121873 | Msa1381530:intron | 45.0% |
| ! | GGGGTATTTATAGGTGGGAA+TGG | - | tig0020435:121873-121892 | Msa1381530:intron | 45.0% |
| ! | TGTTCTTCAGTTCTGACCAC+CGG | - | tig0020435:122002-122021 | Msa1381530:intron | 45.0% |
| TGACTTAAGTCATGCACCAC+TGG | + | tig0020435:122058-122077 | None:intergenic | 45.0% | |
| TGCATGACTTAAGTCACGCA+TGG | - | tig0020435:122062-122081 | Msa1381530:intron | 45.0% | |
| GGTATATTTGGAAGCAGTGC+AGG | - | tig0020435:122167-122186 | Msa1381530:intron | 45.0% | |
| ATAGTGTAGGCCCAAACACT+AGG | - | tig0020435:122329-122348 | Msa1381530:intron | 45.0% | |
| ! | TAGTCAAAGTGATGGCGAAG+GGG | + | tig0020435:122407-122426 | None:intergenic | 45.0% |
| TGAAAGGCGAAGGAAGACTT+CGG | - | tig0020435:122477-122496 | Msa1381530:intron | 45.0% | |
| AAGGAAGACTTCGGTGATCA+TGG | - | tig0020435:122486-122505 | Msa1381530:intron | 45.0% | |
| GACCGAGCACATACAACAAT+AGG | + | tig0020435:123874-123893 | None:intergenic | 45.0% | |
| GTGCTCGGTCTTTGAATATC+TGG | - | tig0020435:123884-123903 | Msa1381530:CDS | 45.0% | |
| ACATGTAGTTTCCTGCCCAA+AGG | - | tig0020435:125807-125826 | Msa1381530:CDS | 45.0% | |
| AGTTTGTGCATTCTGCCCAA+AGG | - | tig0020435:126210-126229 | Msa1381530:intron | 45.0% | |
| GTCATCTCCCACTTACCAAA+AGG | + | tig0020435:126445-126464 | None:intergenic | 45.0% | |
| TGATGATCCAGGTACTTGTG+TGG | - | tig0020435:127060-127079 | Msa1381530:intron | 45.0% | |
| ATGGAATCCACACAAGTACC+TGG | + | tig0020435:127070-127089 | None:intergenic | 45.0% | |
| ! | GCCGGTGATTGACACTATTT+TGG | - | tig0020435:127663-127682 | Msa1381530:intron | 45.0% |
| !!! | ATTTTGGAGCTGAGGCAATG+TGG | - | tig0020435:127679-127698 | Msa1381530:intron | 45.0% |
| CAGAGAAATTATGCGGTCCA+CGG | + | tig0020435:127709-127728 | None:intergenic | 45.0% | |
| ! | TGTGGGCTGCAATCAATTGT+TGG | - | tig0020435:120953-120972 | Msa1381530:intron | 45.0% |
| ATAGTGTAGGCCCAAACACT+AGG | - | tig0020435:122329-122348 | Msa1381530:intron | 45.0% | |
| ! | ATAGTCAGAGTGATGGCGAA+GGG | + | tig0020435:128476-128495 | None:intergenic | 45.0% |
| ! | AATAGTCAGAGTGATGGCGA+AGG | + | tig0020435:128477-128496 | None:intergenic | 45.0% |
| GAGCAGAATAGTCAGAGTGA+TGG | + | tig0020435:128483-128502 | None:intergenic | 45.0% | |
| GTCTCAAATCTCGACGAGTT+CGG | - | tig0020435:128566-128585 | Msa1381530:intron | 45.0% | |
| GGTCATGATGAACGTTGTTG+TGG | + | tig0020435:128715-128734 | None:intergenic | 45.0% | |
| AACACACATAGATGCGGAGA+AGG | + | tig0020435:128736-128755 | None:intergenic | 45.0% | |
| GAACACGAACCATAAGGAAC+CGG | + | tig0020435:128786-128805 | None:intergenic | 45.0% | |
| TCCTTATGGTTCGTGTTCAC+AGG | - | tig0020435:128788-128807 | Msa1381530:CDS | 45.0% | |
| TCCTGTGAACACGAACCATA+AGG | + | tig0020435:128792-128811 | None:intergenic | 45.0% | |
| AGCTCTTTACTTCATCCTGG+TGG | - | tig0020435:128946-128965 | Msa1381530:intron | 45.0% | |
| ! | GCTTTTATTGCAGCCTTGGT+TGG | - | tig0020435:128968-128987 | Msa1381530:intron | 45.0% |
| CGGAGTTGGCATTGTAAACA+TGG | - | tig0020435:129299-129318 | Msa1381530:intron | 45.0% | |
| TGTATGGGTCGTAGCACATT+TGG | - | tig0020435:129370-129389 | Msa1381530:intron | 45.0% | |
| GTATGGGTCGTAGCACATTT+GGG | - | tig0020435:129371-129390 | Msa1381530:intron | 45.0% | |
| !! | AATATTAGATAAAATATTTA+CGG | - | tig0020435:116480-116499 | Msa1381530:intron | 5.0% |
| !! | AATATTAGATAAAATATTTA+CGG | - | tig0020435:116480-116499 | Msa1381530:intron | 5.0% |
| !!! | TTTTAAAAAAAAAAATATTG+GGG | + | tig0020435:119627-119646 | None:intergenic | 5.0% |
| !!! | CTTTTTAAAAAAAAAAATAT+TGG | + | tig0020435:119629-119648 | None:intergenic | 5.0% |
| !! | ATTAATACAAATATAAATAA+AGG | - | tig0020435:121336-121355 | Msa1381530:intron | 5.0% |
| !! | AATTTAAATTAATTAAATCA+TGG | + | tig0020435:125088-125107 | None:intergenic | 5.0% |
| !! | TTTACAATTAAAAATTTATT+TGG | - | tig0020435:125842-125861 | Msa1381530:CDS | 5.0% |
| !! | TTACAATTAAAAATTTATTT+GGG | - | tig0020435:125843-125862 | Msa1381530:CDS | 5.0% |
| !!! | TTTTAAATATAAGAAAAATT+TGG | - | tig0020435:128833-128852 | Msa1381530:CDS | 5.0% |
| !!! | GGTTTTTGTGGAGGAGCGTT+TGG | - | tig0020435:115881-115900 | Msa1381530:intron | 50.0% |
| !! | CACTATTGCAGTGCTGGTTG+AGG | + | tig0020435:116311-116330 | None:intergenic | 50.0% |
| GGGAACCCAACCTTTGTGAT+TGG | - | tig0020435:117048-117067 | Msa1381530:intron | 50.0% | |
| GCACTTCTCACACACACCAT+AGG | + | tig0020435:117171-117190 | None:intergenic | 50.0% | |
| TCGCCAAGATCCCATACAAG+CGG | + | tig0020435:117317-117336 | None:intergenic | 50.0% | |
| TGGGATCTTGGCGAAATCTC+TGG | - | tig0020435:117323-117342 | Msa1381530:intron | 50.0% | |
| AAATAATCCAGGCACGCGCA+CGG | - | tig0020435:117356-117375 | Msa1381530:intron | 50.0% | |
| TAGACATGGTCCAACCCCTT+TGG | - | tig0020435:117727-117746 | Msa1381530:intron | 50.0% | |
| CACGTGTACATCCCTTGACT+TGG | + | tig0020435:117827-117846 | None:intergenic | 50.0% | |
| TAGTTATACGCTAACCCCCC+AGG | + | tig0020435:118184-118203 | None:intergenic | 50.0% | |
| ! | GGGGTTAGCGTATAACTACG+CGG | - | tig0020435:118186-118205 | Msa1381530:intron | 50.0% |
| TGCTGATCGCACTGTCCTTA+AGG | + | tig0020435:118217-118236 | None:intergenic | 50.0% | |
| !! | CACTATTGCAGTGCTGGTTG+AGG | + | tig0020435:116311-116330 | None:intergenic | 50.0% |
| TATGGTCATGGGTGTGTCTC+TGG | - | tig0020435:118698-118717 | Msa1381530:intron | 50.0% | |
| CGGGACCAAAATCGCAACTT+TGG | + | tig0020435:119298-119317 | None:intergenic | 50.0% | |
| ! | CATGTGCAAAACTTTGGGGG+CGG | + | tig0020435:119340-119359 | None:intergenic | 50.0% |
| ! | CCCCCAAAGTTTTGCACATG+TGG | - | tig0020435:119340-119359 | Msa1381530:intron | 50.0% |
| ! | CGGGTCAAAATTGGCATTGG+GGG | + | tig0020435:119375-119394 | None:intergenic | 50.0% |
| CCGGGTCAAAATTGGCATTG+GGG | + | tig0020435:119376-119395 | None:intergenic | 50.0% | |
| !! | CCCCAATGCCAATTTTGACC+CGG | - | tig0020435:119373-119392 | Msa1381530:intron | 50.0% |
| GACCGGGTCAAAATTGGCAT+TGG | + | tig0020435:119378-119397 | None:intergenic | 50.0% | |
| AGCGTAGACCGGGTCAAAAT+TGG | + | tig0020435:119384-119403 | None:intergenic | 50.0% | |
| CCATTTGGTCCAGTTGGAAG+AGG | + | tig0020435:120122-120141 | None:intergenic | 50.0% | |
| CCTCTTCCAACTGGACCAAA+TGG | - | tig0020435:120119-120138 | Msa1381530:intron | 50.0% | |
| !! | TGGTGCCACTGAAAAAGACG+AGG | - | tig0020435:120139-120158 | Msa1381530:intron | 50.0% |
| ! | ACTAGGAGGCGGATTCATGT+TGG | - | tig0020435:120803-120822 | Msa1381530:intron | 50.0% |
| !!! | CATGTTGGCTCCGCTTTTTC+TGG | - | tig0020435:120818-120837 | Msa1381530:intron | 50.0% |
| ACTCCGAGCTCCAGAAAAAG+CGG | + | tig0020435:120831-120850 | None:intergenic | 50.0% | |
| TGCGAGCAAAAGTTGTTGGG+TGG | + | tig0020435:121014-121033 | None:intergenic | 50.0% | |
| GGGTGCGAGCAAAAGTTGTT+GGG | + | tig0020435:121017-121036 | None:intergenic | 50.0% | |
| AGGGTGCGAGCAAAAGTTGT+TGG | + | tig0020435:121018-121037 | None:intergenic | 50.0% | |
| ! | CCATTTTCGGCATGGTTGCA+GGG | + | tig0020435:121037-121056 | None:intergenic | 50.0% |
| TGCGCAAGTTAACTAGCGCA+TGG | + | tig0020435:121060-121079 | None:intergenic | 50.0% | |
| ACTGCGCAAGTTAAGTCACG+TGG | - | tig0020435:121090-121109 | Msa1381530:intron | 50.0% | |
| TGGGGAAATGATCGACCCTT+GGG | + | tig0020435:121701-121720 | None:intergenic | 50.0% | |
| TTGGGGAAATGATCGACCCT+TGG | + | tig0020435:121702-121721 | None:intergenic | 50.0% | |
| GGTCGATCATTTCCCCAAGT+CGG | - | tig0020435:121704-121723 | Msa1381530:intron | 50.0% | |
| !! | AGTAGTGAGTAGCCGACTTG+GGG | + | tig0020435:121719-121738 | None:intergenic | 50.0% |
| TAGAGGGAGAGAGTGATGAG+GGG | - | tig0020435:121811-121830 | Msa1381530:intron | 50.0% | |
| GGTGGGAATGGTAGTATAGG+TGG | - | tig0020435:121885-121904 | Msa1381530:intron | 50.0% | |
| CCATCATGGGCCTAGTGTTT+GGG | + | tig0020435:122342-122361 | None:intergenic | 50.0% | |
| CCAAACACTAGGCCCATGAT+GGG | - | tig0020435:122340-122359 | Msa1381530:intron | 50.0% | |
| TTGGAGCATGTGAAAGGCGA+AGG | - | tig0020435:122467-122486 | Msa1381530:intron | 50.0% | |
| ATCGGCCGTTACAACCAAAG+TGG | - | tig0020435:125720-125739 | Msa1381530:intron | 50.0% | |
| TCGGCCGTTACAACCAAAGT+GGG | - | tig0020435:125721-125740 | Msa1381530:intron | 50.0% | |
| CGGTCCCACTTTGGTTGTAA+CGG | + | tig0020435:125728-125747 | None:intergenic | 50.0% | |
| TGTAGTTTCCTGCCCAAAGG+TGG | - | tig0020435:125810-125829 | Msa1381530:CDS | 50.0% | |
| TGCAATAACCACCTTTGGGC+AGG | + | tig0020435:125821-125840 | None:intergenic | 50.0% | |
| GTAGATGGTTCATGACTCCC+TGG | - | tig0020435:126837-126856 | Msa1381530:intron | 50.0% | |
| TGTTGCAGGGATCACTATGC+CGG | - | tig0020435:127494-127513 | Msa1381530:intron | 50.0% | |
| ! | GCCGGTGATCGACACTATTT+TGG | - | tig0020435:127512-127531 | Msa1381530:intron | 50.0% |
| TGTCGTTGGGATCACTATGC+CGG | - | tig0020435:127645-127664 | Msa1381530:intron | 50.0% | |
| ! | TGAGGCAATGTGGTTTTCCG+TGG | - | tig0020435:127689-127708 | Msa1381530:intron | 50.0% |
| CGTGGACCGCATAATTTCTC+TGG | - | tig0020435:127707-127726 | Msa1381530:intron | 50.0% | |
| TGCATCATGGGATCATGCAG+TGG | - | tig0020435:128100-128119 | Msa1381530:intron | 50.0% | |
| CCATCATGGGCCTAGTGTTT+GGG | + | tig0020435:122342-122361 | None:intergenic | 50.0% | |
| CCAAACACTAGGCCCATGAT+GGG | - | tig0020435:122340-122359 | Msa1381530:intron | 50.0% | |
| ! | TAGTCAGAGTGATGGCGAAG+GGG | + | tig0020435:128475-128494 | None:intergenic | 50.0% |
| TTGGAGCATGTGAAAGGCGA+AGG | - | tig0020435:122467-122486 | Msa1381530:intron | 50.0% | |
| CTCCGCATCTATGTGTGTTG+TGG | - | tig0020435:128737-128756 | Msa1381530:CDS | 50.0% | |
| CGCAGCTCTTTACTTCATCC+TGG | - | tig0020435:128943-128962 | Msa1381530:intron | 50.0% | |
| AGGCTGCAATAAAAGCCACC+AGG | + | tig0020435:128964-128983 | None:intergenic | 50.0% | |
| ! | GGTGGCTTTTATTGCAGCCT+TGG | - | tig0020435:128964-128983 | Msa1381530:intron | 50.0% |
| GATCCGGTTATCAGCACGTG+TGG | - | tig0020435:115315-115334 | Msa1381530:exon | 55.0% | |
| ! | TGGCCACACGTGCTGATAAC+CGG | + | tig0020435:115321-115340 | None:intergenic | 55.0% |
| !! | GGAAGCGTTGGTGGTATTGG+TGG | - | tig0020435:115902-115921 | Msa1381530:intron | 55.0% |
| !! | AGCGTTGGTGGTATTGGTGG+TGG | - | tig0020435:115905-115924 | Msa1381530:intron | 55.0% |
| !! | GTTGGTGGTATTGGTGGTGG+TGG | - | tig0020435:115908-115927 | Msa1381530:intron | 55.0% |
| TATGGTCACGGGTGTGTCTC+TGG | - | tig0020435:116521-116540 | Msa1381530:intron | 55.0% | |
| GCCCCACTTGACACTCACAT+AGG | + | tig0020435:117295-117314 | None:intergenic | 55.0% | |
| TCAAGTGGGGCCGCTTGTAT+GGG | - | tig0020435:117304-117323 | Msa1381530:intron | 55.0% | |
| AATTCTTGCCGTTGGCGCTG+TGG | + | tig0020435:117394-117413 | None:intergenic | 55.0% | |
| AGCGCCAACGGCAAGAATTG+TGG | - | tig0020435:117395-117414 | Msa1381530:intron | 55.0% | |
| GCGCCAACGGCAAGAATTGT+GGG | - | tig0020435:117396-117415 | Msa1381530:intron | 55.0% | |
| CGCCAACGGCAAGAATTGTG+GGG | - | tig0020435:117397-117416 | Msa1381530:intron | 55.0% | |
| GCCAACGGCAAGAATTGTGG+GGG | - | tig0020435:117398-117417 | Msa1381530:intron | 55.0% | |
| ACCCCCACAATTCTTGCCGT+TGG | + | tig0020435:117402-117421 | None:intergenic | 55.0% | |
| ! | TTGTGGGGGTGTGATGCGAA+TGG | - | tig0020435:117412-117431 | Msa1381530:intron | 55.0% |
| CTGACGTGGCACCCTAAGTA+AGG | - | tig0020435:119402-119421 | Msa1381530:intron | 55.0% | |
| GTGGCACCATTTGGTCCAGT+TGG | + | tig0020435:120128-120147 | None:intergenic | 55.0% | |
| !! | TGGCGTACTCGGTGGATTGT+TGG | - | tig0020435:120779-120798 | Msa1381530:intron | 55.0% |
| !! | GGCGTACTCGGTGGATTGTT+GGG | - | tig0020435:120780-120799 | Msa1381530:intron | 55.0% |
| !! | CTCGGTGGATTGTTGGGACT+AGG | - | tig0020435:120786-120805 | Msa1381530:intron | 55.0% |
| !! | GGTGGATTGTTGGGACTAGG+AGG | - | tig0020435:120789-120808 | Msa1381530:intron | 55.0% |
| GGATTGTTGGGACTAGGAGG+CGG | - | tig0020435:120792-120811 | Msa1381530:intron | 55.0% | |
| !!! | GCTCCGCTTTTTCTGGAGCT+CGG | - | tig0020435:120825-120844 | Msa1381530:intron | 55.0% |
| CCCTGCAACCATGCCGAAAA+TGG | - | tig0020435:121034-121053 | Msa1381530:intron | 55.0% | |
| !! | GCCATTTTCGGCATGGTTGC+AGG | + | tig0020435:121038-121057 | None:intergenic | 55.0% |
| GTCACGTGGCGCAAGTTAAG+TGG | - | tig0020435:121104-121123 | Msa1381530:intron | 55.0% | |
| AGAGGGAGAGAGTGATGAGG+GGG | - | tig0020435:121812-121831 | Msa1381530:intron | 55.0% | |
| GTTAACTCACGCACGTTGGC+CGG | + | tig0020435:122024-122043 | None:intergenic | 55.0% | |
| GCGAGTTAACTCACGCACGT+TGG | + | tig0020435:122028-122047 | None:intergenic | 55.0% | |
| GCGTGAGTTAACTCGCGCAT+AGG | - | tig0020435:122032-122051 | Msa1381530:intron | 55.0% | |
| TTAACTCGCGCATAGGCCAG+TGG | - | tig0020435:122039-122058 | Msa1381530:intron | 55.0% | |
| TGCGTGACTTAAGTCGCGCA+TGG | - | tig0020435:122094-122113 | Msa1381530:intron | 55.0% | |
| CCCAAACACTAGGCCCATGA+TGG | - | tig0020435:122339-122358 | Msa1381530:intron | 55.0% | |
| CCCATCATGGGCCTAGTGTT+TGG | + | tig0020435:122343-122362 | None:intergenic | 55.0% | |
| ! | AACACTAGGCCCATGATGGG+TGG | - | tig0020435:122343-122362 | Msa1381530:intron | 55.0% |
| CAATAGAGGCGGTCCCACTT+TGG | + | tig0020435:125737-125756 | None:intergenic | 55.0% | |
| GATCATGCAGTGGCCACGTT+AGG | - | tig0020435:128110-128129 | Msa1381530:intron | 55.0% | |
| CCCAAACACTAGGCCCATGA+TGG | - | tig0020435:122339-122358 | Msa1381530:intron | 55.0% | |
| CCCATCATGGGCCTAGTGTT+TGG | + | tig0020435:122343-122362 | None:intergenic | 55.0% | |
| ! | AACACTAGGCCCATGATGGG+TGG | - | tig0020435:122343-122362 | Msa1381530:intron | 55.0% |
| ! | CTCGACGAGTTCGGTGATCA+TGG | - | tig0020435:128575-128594 | Msa1381530:intron | 55.0% |
| GGATTCAATGTCGTGCACGC+AGG | - | tig0020435:128680-128699 | Msa1381530:intron | 55.0% | |
| !! | GGAGGAGCGTTTGGAAGCGT+TGG | - | tig0020435:115890-115909 | Msa1381530:intron | 60.0% |
| !! | GGAGCGTTTGGAAGCGTTGG+TGG | - | tig0020435:115893-115912 | Msa1381530:intron | 60.0% |
| GTCAAGTGGGGCCGCTTGTA+TGG | - | tig0020435:117303-117322 | Msa1381530:intron | 60.0% | |
| GGGCCGCTTGTATGGGATCT+TGG | - | tig0020435:117311-117330 | Msa1381530:intron | 60.0% | |
| TGGCGCTGTGGTGCTCGAAT+AGG | + | tig0020435:117382-117401 | None:intergenic | 60.0% | |
| TTCGAGCACCACAGCGCCAA+CGG | - | tig0020435:117383-117402 | Msa1381530:intron | 60.0% | |
| ! | GCCTTACTGGCTGGCGTACT+CGG | - | tig0020435:120768-120787 | Msa1381530:intron | 60.0% |
| ACCGAGTACGCCAGCCAGTA+AGG | + | tig0020435:120772-120791 | None:intergenic | 60.0% | |
| ! | TTACTGGCTGGCGTACTCGG+TGG | - | tig0020435:120771-120790 | Msa1381530:intron | 60.0% |
| !! | GCGCATGGCCATTTTCGGCA+TGG | + | tig0020435:121045-121064 | None:intergenic | 60.0% |
| GGCGCAAGTTAAGTGGCGCA+AGG | - | tig0020435:121111-121130 | Msa1381530:intron | 60.0% | |
| AGGGCGCGAGCAAAAGTTGC+TGG | - | tig0020435:122187-122206 | Msa1381530:intron | 60.0% | |
| GGGCGCGAGCAAAAGTTGCT+GGG | - | tig0020435:122188-122207 | Msa1381530:intron | 60.0% | |
| CGCGAGCAAAAGTTGCTGGG+TGG | - | tig0020435:122191-122210 | Msa1381530:intron | 60.0% | |
| CCCTAGGCACCACCCATCAT+GGG | + | tig0020435:122355-122374 | None:intergenic | 60.0% | |
| !! | CCCATGATGGGTGGTGCCTA+GGG | - | tig0020435:122352-122371 | Msa1381530:intron | 60.0% |
| ACCCTAGGCACCACCCATCA+TGG | + | tig0020435:122356-122375 | None:intergenic | 60.0% | |
| CCCTAGGCACCACCCATCAT+GGG | + | tig0020435:122355-122374 | None:intergenic | 60.0% | |
| !! | CCCATGATGGGTGGTGCCTA+GGG | - | tig0020435:122352-122371 | Msa1381530:intron | 60.0% |
| ACCCTAGGCACCACCCATCA+TGG | + | tig0020435:122356-122375 | None:intergenic | 60.0% | |
| TGACCCGGTCTACGCTGACG+TGG | - | tig0020435:119388-119407 | Msa1381530:intron | 65.0% | |
| GTGCCACGTCAGCGTAGACC+GGG | + | tig0020435:119394-119413 | None:intergenic | 65.0% | |
| ! | GGTGCCACGTCAGCGTAGAC+CGG | + | tig0020435:119395-119414 | None:intergenic | 65.0% |
| AACTCACGCACGTTGGCCGG+TGG | + | tig0020435:122021-122040 | None:intergenic | 65.0% | |
| !! | GCCCATGATGGGTGGTGCCT+AGG | - | tig0020435:122351-122370 | Msa1381530:intron | 65.0% |
| GGGTGGTGCCTAGGGTTGCA+CGG | - | tig0020435:122360-122379 | Msa1381530:intron | 65.0% | |
| !! | GCCCATGATGGGTGGTGCCT+AGG | - | tig0020435:122351-122370 | Msa1381530:intron | 65.0% |
| GGGTGGTGCCTAGGGTTGCA+CGG | - | tig0020435:122360-122379 | Msa1381530:intron | 65.0% | |
| GAATAGGCCGTGCGCGTGCC+TGG | + | tig0020435:117366-117385 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020435 | gene | 115128 | 129572 | 115128 | ID=Msa1381530;Name=Msa1381530 |
| tig0020435 | mRNA | 115128 | 129572 | 115128 | ID=Msa1381530-mRNA-1;Parent=Msa1381530;Name=Msa1381530-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.12|0.33|0.77|1|1|9|189|315 |
| tig0020435 | exon | 115128 | 115402 | 115128 | ID=Msa1381530-mRNA-1:exon:7653;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 121719 | 121725 | 121719 | ID=Msa1381530-mRNA-1:exon:7652;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 123840 | 124061 | 123840 | ID=Msa1381530-mRNA-1:exon:7651;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 124330 | 124338 | 124330 | ID=Msa1381530-mRNA-1:exon:7650;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 125646 | 125710 | 125646 | ID=Msa1381530-mRNA-1:exon:7649;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 125803 | 126003 | 125803 | ID=Msa1381530-mRNA-1:exon:7648;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 128616 | 128621 | 128616 | ID=Msa1381530-mRNA-1:exon:7647;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 128702 | 128860 | 128702 | ID=Msa1381530-mRNA-1:exon:7646;Parent=Msa1381530-mRNA-1 |
| tig0020435 | exon | 129380 | 129572 | 129380 | ID=Msa1381530-mRNA-1:exon:7645;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 129380 | 129572 | 129380 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 128702 | 128860 | 128702 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 128616 | 128621 | 128616 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 125803 | 126003 | 125803 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 125646 | 125710 | 125646 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 124330 | 124338 | 124330 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 123840 | 124061 | 123840 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 121719 | 121725 | 121719 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | CDS | 115317 | 115402 | 115317 | ID=Msa1381530-mRNA-1:cds;Parent=Msa1381530-mRNA-1 |
| tig0020435 | three_prime_UTR | 115128 | 115316 | 115128 | ID=Msa1381530-mRNA-1:three_prime_utr;Parent=Msa1381530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
