Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865320 | XP_013450815.1 | 63.551 | 214 | 73 | 3 | 1 | 212 | 30 | 240 | 4.39e-80 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865320 | sp|A2YZ24|SWT7B_ORYSI | 38.496 | 226 | 120 | 4 | 3 | 219 | 32 | 247 | 2.92e-43 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865320 | A0A072UGH8 | 63.551 | 214 | 73 | 3 | 1 | 212 | 30 | 240 | 2.10e-80 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0865320 | 0.832092 | 1.151449e-55 | -8.615850e-47 |
| Msa0013750 | Msa0865320 | 0.837067 | 6.467200e-57 | -8.615850e-47 |
| Msa0014330 | Msa0865320 | 0.806796 | 6.913453e-50 | -8.615850e-47 |
| Msa0015750 | Msa0865320 | 0.866278 | 3.204850e-65 | -8.615850e-47 |
| Msa0016570 | Msa0865320 | 0.836275 | 1.029368e-56 | -8.615850e-47 |
| Msa0016580 | Msa0865320 | 0.814765 | 1.304016e-51 | -8.615850e-47 |
| Msa0028480 | Msa0865320 | 0.801674 | 8.053375e-49 | -8.615850e-47 |
| Msa0071500 | Msa0865320 | 0.802138 | 6.468352e-49 | -8.615850e-47 |
| Msa0092630 | Msa0865320 | 0.816835 | 4.504864e-52 | -8.615850e-47 |
| Msa0102070 | Msa0865320 | 0.888621 | 5.018489e-73 | -8.615850e-47 |
| Msa0110270 | Msa0865320 | 0.809502 | 1.833030e-50 | -8.615850e-47 |
| Msa0111510 | Msa0865320 | 0.837608 | 4.702883e-57 | -8.615850e-47 |
| Msa0118050 | Msa0865320 | 0.823941 | 1.056159e-53 | -8.615850e-47 |
| Msa0118060 | Msa0865320 | 0.828619 | 8.127525e-55 | -8.615850e-47 |
| Msa0604350 | Msa0865320 | 0.842554 | 2.409037e-58 | -8.615850e-47 |
| Msa0636170 | Msa0865320 | 0.867128 | 1.718801e-65 | -8.615850e-47 |
| Msa0639610 | Msa0865320 | 0.839445 | 1.578060e-57 | -8.615850e-47 |
| Msa0675830 | Msa0865320 | 0.822981 | 1.770335e-53 | -8.615850e-47 |
| Msa0678930 | Msa0865320 | 0.860338 | 2.214563e-63 | -8.615850e-47 |
| Msa0694370 | Msa0865320 | 0.845209 | 4.683198e-59 | -8.615850e-47 |
| Msa0718780 | Msa0865320 | 0.822487 | 2.307644e-53 | -8.615850e-47 |
| Msa0725850 | Msa0865320 | 0.829580 | 4.755059e-55 | -8.615850e-47 |
| Msa0726140 | Msa0865320 | 0.922129 | 1.467610e-88 | -8.615850e-47 |
| Msa0729800 | Msa0865320 | 0.873254 | 1.694966e-67 | -8.615850e-47 |
| Msa0732310 | Msa0865320 | 0.837952 | 3.836059e-57 | -8.615850e-47 |
| Msa0732710 | Msa0865320 | 0.824356 | 8.436576e-54 | -8.615850e-47 |
| Msa0733290 | Msa0865320 | 0.883392 | 4.663448e-71 | -8.615850e-47 |
| Msa0735080 | Msa0865320 | 0.814632 | 1.395694e-51 | -8.615850e-47 |
| Msa0741990 | Msa0865320 | 0.829267 | 5.663491e-55 | -8.615850e-47 |
| Msa0743810 | Msa0865320 | 0.915743 | 4.093682e-85 | -8.615850e-47 |
| Msa0745060 | Msa0865320 | 0.977480 | 7.286951e-144 | -8.615850e-47 |
| Msa0767720 | Msa0865320 | 0.846705 | 1.836109e-59 | -8.615850e-47 |
| Msa0777870 | Msa0865320 | 0.861772 | 8.110345e-64 | -8.615850e-47 |
| Msa0783160 | Msa0865320 | 0.892836 | 1.099227e-74 | -8.615850e-47 |
| Msa0784290 | Msa0865320 | 0.821657 | 3.594440e-53 | -8.615850e-47 |
| Msa0784300 | Msa0865320 | 0.820365 | 7.127973e-53 | -8.615850e-47 |
| Msa0787600 | Msa0865320 | 0.863686 | 2.085800e-64 | -8.615850e-47 |
| Msa0789250 | Msa0865320 | 0.804230 | 2.387082e-49 | -8.615850e-47 |
| Msa0804210 | Msa0865320 | 0.807636 | 4.588691e-50 | -8.615850e-47 |
| Msa0808010 | Msa0865320 | 0.878151 | 3.540819e-69 | -8.615850e-47 |
| Msa0808020 | Msa0865320 | 0.875006 | 4.329525e-68 | -8.615850e-47 |
| Msa0811080 | Msa0865320 | 0.847938 | 8.424054e-60 | -8.615850e-47 |
| Msa0811270 | Msa0865320 | 0.829664 | 4.536042e-55 | -8.615850e-47 |
| Msa0824600 | Msa0865320 | 0.815755 | 7.856207e-52 | -8.615850e-47 |
| Msa0825860 | Msa0865320 | 0.984759 | 1.671401e-161 | -8.615850e-47 |
| Msa0833290 | Msa0865320 | 0.838090 | 3.534746e-57 | -8.615850e-47 |
| Msa0833300 | Msa0865320 | 0.809885 | 1.516319e-50 | -8.615850e-47 |
| Msa0123810 | Msa0865320 | 0.838402 | 2.937569e-57 | -8.615850e-47 |
| Msa0124100 | Msa0865320 | 0.826583 | 2.505774e-54 | -8.615850e-47 |
| Msa0124150 | Msa0865320 | 0.811629 | 6.363567e-51 | -8.615850e-47 |
| Msa0142220 | Msa0865320 | 0.832661 | 8.320490e-56 | -8.615850e-47 |
| Msa0145750 | Msa0865320 | 0.872671 | 2.659352e-67 | -8.615850e-47 |
| Msa0153910 | Msa0865320 | 0.842311 | 2.794823e-58 | -8.615850e-47 |
| Msa0200000 | Msa0865320 | 0.866791 | 2.202111e-65 | -8.615850e-47 |
| Msa0200940 | Msa0865320 | 0.812443 | 4.228604e-51 | -8.615850e-47 |
| Msa0227480 | Msa0865320 | 0.872698 | 2.604482e-67 | -8.615850e-47 |
| Msa0231000 | Msa0865320 | 0.804421 | 2.177410e-49 | -8.615850e-47 |
| Msa0232850 | Msa0865320 | 0.896300 | 4.211052e-76 | -8.615850e-47 |
| Msa0235140 | Msa0865320 | 0.803864 | 2.843573e-49 | -8.615850e-47 |
| Msa0365500 | Msa0865320 | 0.868252 | 7.498517e-66 | -8.615850e-47 |
| Msa0366580 | Msa0865320 | 0.855322 | 6.819019e-62 | -8.615850e-47 |
| Msa0369730 | Msa0865320 | 0.805374 | 1.376928e-49 | -8.615850e-47 |
| Msa0384800 | Msa0865320 | 0.869325 | 3.370657e-66 | -8.615850e-47 |
| Msa0384890 | Msa0865320 | 0.816778 | 4.639662e-52 | -8.615850e-47 |
| Msa0394970 | Msa0865320 | 0.828492 | 8.725554e-55 | -8.615850e-47 |
| Msa0396600 | Msa0865320 | 0.849681 | 2.766305e-60 | -8.615850e-47 |
| Msa0406120 | Msa0865320 | 0.888335 | 6.469047e-73 | -8.615850e-47 |
| Msa0406280 | Msa0865320 | 0.825214 | 5.296070e-54 | -8.615850e-47 |
| Msa0407750 | Msa0865320 | 0.804787 | 1.827111e-49 | -8.615850e-47 |
| Msa0414410 | Msa0865320 | 0.880012 | 7.790120e-70 | -8.615850e-47 |
| Msa0414420 | Msa0865320 | 0.919503 | 4.148481e-87 | -8.615850e-47 |
| Msa0423020 | Msa0865320 | 0.816729 | 4.760293e-52 | -8.615850e-47 |
| Msa0435230 | Msa0865320 | 0.811352 | 7.307949e-51 | -8.615850e-47 |
| Msa0436780 | Msa0865320 | 0.849901 | 2.401833e-60 | -8.615850e-47 |
| Msa0436800 | Msa0865320 | 0.816653 | 4.949163e-52 | -8.615850e-47 |
| Msa0438620 | Msa0865320 | 0.863054 | 3.272280e-64 | -8.615850e-47 |
| Msa0450000 | Msa0865320 | 0.860830 | 1.570831e-63 | -8.615850e-47 |
| Msa0450570 | Msa0865320 | 0.840242 | 9.783285e-58 | -8.615850e-47 |
| Msa0451730 | Msa0865320 | 0.861140 | 1.264880e-63 | -8.615850e-47 |
| Msa0452900 | Msa0865320 | 0.935564 | 6.949693e-97 | -8.615850e-47 |
| Msa0452910 | Msa0865320 | 0.808683 | 2.744972e-50 | -8.615850e-47 |
| Msa0453120 | Msa0865320 | 0.869718 | 2.509527e-66 | -8.615850e-47 |
| Msa0454370 | Msa0865320 | 0.852612 | 4.117435e-61 | -8.615850e-47 |
| Msa0454910 | Msa0865320 | 0.874212 | 8.055076e-68 | -8.615850e-47 |
| Msa0459160 | Msa0865320 | 0.855613 | 5.608742e-62 | -8.615850e-47 |
| Msa0459170 | Msa0865320 | 0.823631 | 1.248286e-53 | -8.615850e-47 |
| Msa0482620 | Msa0865320 | 0.827535 | 1.482484e-54 | -8.615850e-47 |
| Msa0256440 | Msa0865320 | 0.817359 | 3.434844e-52 | -8.615850e-47 |
| Msa0267000 | Msa0865320 | 0.916935 | 9.783702e-86 | -8.615850e-47 |
| Msa0267010 | Msa0865320 | 0.925719 | 1.252037e-90 | -8.615850e-47 |
| Msa0270520 | Msa0865320 | 0.823964 | 1.042910e-53 | -8.615850e-47 |
| Msa0282310 | Msa0865320 | 0.836954 | 6.910889e-57 | -8.615850e-47 |
| Msa0285810 | Msa0865320 | 0.812190 | 4.802100e-51 | -8.615850e-47 |
| Msa0304170 | Msa0865320 | 0.854165 | 1.475796e-61 | -8.615850e-47 |
| Msa0306460 | Msa0865320 | 0.851612 | 7.924821e-61 | -8.615850e-47 |
| Msa0313760 | Msa0865320 | 0.818243 | 2.169935e-52 | -8.615850e-47 |
| Msa0342240 | Msa0865320 | 0.905238 | 5.301857e-80 | -8.615850e-47 |
| Msa0353190 | Msa0865320 | 0.800355 | 1.498250e-48 | -8.615850e-47 |
| Msa0360510 | Msa0865320 | 0.874808 | 5.056409e-68 | -8.615850e-47 |
| Msa0362420 | Msa0865320 | 0.807772 | 4.293017e-50 | -8.615850e-47 |
| Msa0363300 | Msa0865320 | 0.834554 | 2.803297e-56 | -8.615850e-47 |
| Msa0485030 | Msa0865320 | 0.826343 | 2.857260e-54 | -8.615850e-47 |
| Msa0491590 | Msa0865320 | 0.883287 | 5.096462e-71 | -8.615850e-47 |
| Msa0500170 | Msa0865320 | 0.814876 | 1.232141e-51 | -8.615850e-47 |
| Msa0502760 | Msa0865320 | 0.837753 | 4.314925e-57 | -8.615850e-47 |
| Msa0506270 | Msa0865320 | 0.851779 | 7.105721e-61 | -8.615850e-47 |
| Msa0534540 | Msa0865320 | 0.823946 | 1.053414e-53 | -8.615850e-47 |
| Msa0548060 | Msa0865320 | 0.839936 | 1.175627e-57 | -8.615850e-47 |
| Msa0564890 | Msa0865320 | 0.898924 | 3.291619e-77 | -8.615850e-47 |
| Msa0596150 | Msa0865320 | 0.846257 | 2.433334e-59 | -8.615850e-47 |
| Msa0845930 | Msa0865320 | 0.821373 | 4.179249e-53 | -8.615850e-47 |
| Msa0846210 | Msa0865320 | 0.823658 | 1.230160e-53 | -8.615850e-47 |
| Msa0846330 | Msa0865320 | 0.906724 | 1.092183e-80 | -8.615850e-47 |
| Msa0846350 | Msa0865320 | 0.906046 | 2.254192e-80 | -8.615850e-47 |
| Msa0848960 | Msa0865320 | 0.835245 | 1.877509e-56 | -8.615850e-47 |
| Msa0854980 | Msa0865320 | 0.837721 | 4.396816e-57 | -8.615850e-47 |
| Msa0858980 | Msa0865320 | 0.841334 | 5.060034e-58 | -8.615850e-47 |
| Msa0865320 | Msa0872230 | 0.836676 | 8.138503e-57 | -8.615850e-47 |
| Msa0865320 | Msa0873460 | 0.816033 | 6.812994e-52 | -8.615850e-47 |
| Msa0865320 | Msa0885280 | 0.817503 | 3.188570e-52 | -8.615850e-47 |
| Msa0865320 | Msa0885290 | 0.870541 | 1.350368e-66 | -8.615850e-47 |
| Msa0865320 | Msa0887920 | 0.810231 | 1.277353e-50 | -8.615850e-47 |
| Msa0865320 | Msa0888370 | 0.870860 | 1.060406e-66 | -8.615850e-47 |
| Msa0865320 | Msa0888420 | 0.842351 | 2.727168e-58 | -8.615850e-47 |
| Msa0865320 | Msa0895270 | 0.817608 | 3.019957e-52 | -8.615850e-47 |
| Msa0865320 | Msa0896080 | 0.844819 | 5.968469e-59 | -8.615850e-47 |
| Msa0865320 | Msa0907260 | 0.814154 | 1.779786e-51 | -8.615850e-47 |
| Msa0865320 | Msa0914760 | 0.805487 | 1.303777e-49 | -8.615850e-47 |
| Msa0865320 | Msa0916680 | 0.806843 | 6.756131e-50 | -8.615850e-47 |
| Msa0865320 | Msa0952350 | 0.816508 | 5.335191e-52 | -8.615850e-47 |
| Msa0865320 | Msa0952720 | 0.822943 | 1.807577e-53 | -8.615850e-47 |
| Msa0865320 | Msa0954910 | 0.819899 | 9.115454e-53 | -8.615850e-47 |
| Msa0865320 | Msa0956270 | 0.817287 | 3.566764e-52 | -8.615850e-47 |
| Msa0865320 | Msa0957680 | 0.817683 | 2.904393e-52 | -8.615850e-47 |
| Msa0865320 | Msa0957860 | 0.847243 | 1.308317e-59 | -8.615850e-47 |
| Msa0865320 | Msa0957960 | 0.847226 | 1.322436e-59 | -8.615850e-47 |
| Msa0865320 | Msa0979410 | 0.816728 | 4.761492e-52 | -8.615850e-47 |
| Msa0865320 | Msa0979850 | 0.811019 | 8.631539e-51 | -8.615850e-47 |
| Msa0865320 | Msa0981270 | 0.819802 | 9.592430e-53 | -8.615850e-47 |
| Msa0865320 | Msa0981370 | 0.879952 | 8.181163e-70 | -8.615850e-47 |
| Msa0865320 | Msa0989060 | 0.873441 | 1.466562e-67 | -8.615850e-47 |
| Msa0865320 | Msa0991820 | 0.807756 | 4.327676e-50 | -8.615850e-47 |
| Msa0865320 | Msa0995760 | 0.810875 | 9.272796e-51 | -8.615850e-47 |
| Msa0865320 | Msa1016280 | 0.916491 | 1.670809e-85 | -8.615850e-47 |
| Msa0865320 | Msa1024240 | 0.868948 | 4.466249e-66 | -8.615850e-47 |
| Msa0865320 | Msa1024370 | 0.800943 | 1.136718e-48 | -8.615850e-47 |
| Msa0865320 | Msa1025360 | 0.930285 | 2.047250e-93 | -8.615850e-47 |
| Msa0865320 | Msa1025370 | 0.921509 | 3.265507e-88 | -8.615850e-47 |
| Msa0865320 | Msa1028230 | 0.819809 | 9.554795e-53 | -8.615850e-47 |
| Msa0865320 | Msa1030060 | 0.817176 | 3.777105e-52 | -8.615850e-47 |
| Msa0865320 | Msa1037200 | 0.818673 | 1.733847e-52 | -8.615850e-47 |
| Msa0865320 | Msa1042430 | 0.819213 | 1.307202e-52 | -8.615850e-47 |
| Msa0865320 | Msa1044830 | 0.924739 | 4.711168e-90 | -8.615850e-47 |
| Msa0865320 | Msa1044840 | 0.932412 | 8.859018e-95 | -8.615850e-47 |
| Msa0865320 | Msa1057920 | 0.806776 | 6.979564e-50 | -8.615850e-47 |
| Msa0865320 | Msa1060840 | 0.845828 | 3.182794e-59 | -8.615850e-47 |
| Msa0865320 | Msa1062810 | 0.816508 | 5.335191e-52 | -8.615850e-47 |
| Msa0865320 | Msa1077460 | 0.832820 | 7.600731e-56 | -8.615850e-47 |
| Msa0865320 | Msa1092990 | 0.922959 | 4.980045e-89 | -8.615850e-47 |
| Msa0865320 | Msa1096580 | 0.831690 | 1.446939e-55 | -8.615850e-47 |
| Msa0865320 | Msa1100980 | 0.926453 | 4.591328e-91 | -8.615850e-47 |
| Msa0865320 | Msa1109440 | 0.896566 | 3.261095e-76 | -8.615850e-47 |
| Msa0865320 | Msa1112300 | 0.841137 | 5.702123e-58 | -8.615850e-47 |
| Msa0865320 | Msa1121200 | 0.881845 | 1.709780e-70 | -8.615850e-47 |
| Msa0865320 | Msa1123420 | 0.826493 | 2.632777e-54 | -8.615850e-47 |
| Msa0865320 | Msa1135740 | 0.906021 | 2.315036e-80 | -8.615850e-47 |
| Msa0865320 | Msa1136090 | 0.862004 | 6.887586e-64 | -8.615850e-47 |
| Msa0865320 | Msa1146110 | 0.903300 | 4.001429e-79 | -8.615850e-47 |
| Msa0865320 | Msa1149360 | 0.830738 | 2.479413e-55 | -8.615850e-47 |
| Msa0865320 | Msa1150370 | 0.851296 | 9.735795e-61 | -8.615850e-47 |
| Msa0865320 | Msa1160670 | 0.814469 | 1.516625e-51 | -8.615850e-47 |
| Msa0865320 | Msa1164120 | 0.834017 | 3.822118e-56 | -8.615850e-47 |
| Msa0865320 | Msa1173920 | 0.876169 | 1.729378e-68 | -8.615850e-47 |
| Msa0865320 | Msa1178340 | 0.838051 | 3.617951e-57 | -8.615850e-47 |
| Msa0865320 | Msa1178720 | 0.802563 | 5.287045e-49 | -8.615850e-47 |
| Msa0865320 | Msa1182090 | 0.822070 | 2.883865e-53 | -8.615850e-47 |
| Msa0865320 | Msa1187940 | 0.889906 | 1.592174e-73 | -8.615850e-47 |
| Msa0865320 | Msa1187950 | 0.877900 | 4.333596e-69 | -8.615850e-47 |
| Msa0865320 | Msa1192640 | 0.907828 | 3.323278e-81 | -8.615850e-47 |
| Msa0865320 | Msa1193730 | 0.844774 | 6.139905e-59 | -8.615850e-47 |
| Msa0865320 | Msa1230430 | 0.826908 | 2.095567e-54 | -8.615850e-47 |
| Msa0865320 | Msa1246880 | 0.865093 | 7.582913e-65 | -8.615850e-47 |
| Msa0865320 | Msa1260100 | 0.832192 | 1.087766e-55 | -8.615850e-47 |
| Msa0865320 | Msa1269670 | 0.967695 | 1.237933e-127 | -8.615850e-47 |
| Msa0865320 | Msa1270230 | 0.911404 | 6.320366e-83 | -8.615850e-47 |
| Msa0865320 | Msa1270240 | 0.901837 | 1.788844e-78 | -8.615850e-47 |
| Msa0865320 | Msa1270270 | 0.915869 | 3.521770e-85 | -8.615850e-47 |
| Msa0865320 | Msa1273230 | 0.833716 | 4.546153e-56 | -8.615850e-47 |
| Msa0865320 | Msa1283330 | 0.920196 | 1.737268e-87 | -8.615850e-47 |
| Msa0865320 | Msa1285930 | 0.913097 | 9.124837e-84 | -8.615850e-47 |
| Msa0865320 | Msa1287800 | 0.916217 | 2.323546e-85 | -8.615850e-47 |
| Msa0865320 | Msa1287810 | 0.934371 | 4.476473e-96 | -8.615850e-47 |
| Msa0865320 | Msa1287820 | 0.838103 | 3.508188e-57 | -8.615850e-47 |
| Msa0865320 | Msa1287830 | 0.876363 | 1.482649e-68 | -8.615850e-47 |
| Msa0865320 | Msa1289420 | 0.826341 | 2.860729e-54 | -8.615850e-47 |
| Msa0865320 | Msa1289430 | 0.860653 | 1.777480e-63 | -8.615850e-47 |
| Msa0865320 | Msa1297210 | 0.863649 | 2.141663e-64 | -8.615850e-47 |
| Msa0865320 | Msa1305480 | 0.859580 | 3.749209e-63 | -8.615850e-47 |
| Msa0865320 | Msa1307890 | 0.875958 | 2.043869e-68 | -8.615850e-47 |
| Msa0865320 | Msa1310120 | 0.829430 | 5.170937e-55 | -8.615850e-47 |
| Msa0865320 | Msa1313980 | 0.814454 | 1.527962e-51 | -8.615850e-47 |
| Msa0865320 | Msa1314280 | 0.819071 | 1.407730e-52 | -8.615850e-47 |
| Msa0865320 | Msa1320300 | 0.870055 | 1.947667e-66 | -8.615850e-47 |
| Msa0865320 | Msa1321560 | 0.865164 | 7.199783e-65 | -8.615850e-47 |
| Msa0865320 | Msa1340590 | 0.879769 | 9.506660e-70 | -8.615850e-47 |
| Msa0865320 | Msa1342200 | 0.831016 | 2.119486e-55 | -8.615850e-47 |
| Msa0865320 | Msa1344520 | 0.802295 | 6.003924e-49 | -8.615850e-47 |
| Msa0865320 | Msa1345660 | 0.818585 | 1.814947e-52 | -8.615850e-47 |
| Msa0865320 | Msa1369430 | 0.826728 | 2.313886e-54 | -8.615850e-47 |
| Msa0865320 | Msa1370210 | 0.839937 | 1.175180e-57 | -8.615850e-47 |
| Msa0865320 | Msa1382690 | 0.818615 | 1.787575e-52 | -8.615850e-47 |
| Msa0865320 | Msa1382700 | 0.830585 | 2.703574e-55 | -8.615850e-47 |
| Msa0865320 | Msa1386330 | 0.854367 | 1.290454e-61 | -8.615850e-47 |
| Msa0865320 | Msa1397150 | 0.817539 | 3.129760e-52 | -8.615850e-47 |
| Msa0865320 | Msa1397580 | 0.877552 | 5.732853e-69 | -8.615850e-47 |
| Msa0865320 | Msa1402790 | 0.819352 | 1.214980e-52 | -8.615850e-47 |
| Msa0865320 | Msa1404000 | 0.910710 | 1.381353e-82 | -8.615850e-47 |
| Msa0865320 | Msa1408780 | 0.847003 | 1.522299e-59 | -8.615850e-47 |
| Msa0865320 | Msa1415310 | 0.916154 | 2.504771e-85 | -8.615850e-47 |
| Msa0865320 | Msa1422180 | 0.879752 | 9.639121e-70 | -8.615850e-47 |
| Msa0865320 | Msa1433120 | 0.901748 | 1.956397e-78 | -8.615850e-47 |
| Msa0865320 | Msa1451190 | 0.817085 | 3.960138e-52 | -8.615850e-47 |
| Msa0865320 | Msa1451570 | 0.823001 | 1.751837e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865320 | MtrunA17_Chr6g0450941 | 55.024 | 209 | 75 | 4 | 3 | 205 | 105 | 300 | 3.23e-66 | 207 |
| Msa0865320 | MtrunA17_Chr6g0450931 | 53.731 | 201 | 83 | 2 | 4 | 203 | 10 | 201 | 2.27e-65 | 202 |
| Msa0865320 | MtrunA17_Chr6g0450901 | 76.852 | 108 | 25 | 0 | 105 | 212 | 6 | 113 | 5.55e-55 | 172 |
| Msa0865320 | MtrunA17_Chr6g0450951 | 48.454 | 194 | 90 | 2 | 4 | 196 | 10 | 194 | 9.47e-53 | 170 |
| Msa0865320 | MtrunA17_Chr4g0059191 | 38.308 | 201 | 113 | 3 | 3 | 202 | 9 | 199 | 8.99e-34 | 121 |
| Msa0865320 | MtrunA17_Chr8g0388621 | 36.744 | 215 | 117 | 6 | 6 | 218 | 37 | 234 | 4.90e-33 | 120 |
| Msa0865320 | MtrunA17_Chr3g0119991 | 36.530 | 219 | 123 | 5 | 4 | 220 | 12 | 216 | 8.30e-32 | 117 |
| Msa0865320 | MtrunA17_Chr3g0119951 | 36.530 | 219 | 123 | 5 | 4 | 220 | 33 | 237 | 1.18e-31 | 117 |
| Msa0865320 | MtrunA17_Chr1g0159431 | 33.333 | 219 | 122 | 6 | 2 | 214 | 28 | 228 | 2.42e-26 | 102 |
| Msa0865320 | MtrunA17_Chr3g0125861 | 29.536 | 237 | 142 | 6 | 2 | 232 | 28 | 245 | 1.35e-23 | 95.5 |
| Msa0865320 | MtrunA17_Chr2g0314571 | 33.005 | 203 | 124 | 4 | 2 | 203 | 37 | 228 | 1.82e-22 | 92.4 |
| Msa0865320 | MtrunA17_Chr6g0450911 | 61.039 | 77 | 28 | 1 | 3 | 77 | 43 | 119 | 4.87e-21 | 85.9 |
| Msa0865320 | MtrunA17_Chr1g0158931 | 30.876 | 217 | 125 | 6 | 2 | 207 | 29 | 231 | 1.08e-19 | 85.1 |
| Msa0865320 | MtrunA17_Chr2g0295681 | 33.019 | 212 | 122 | 7 | 3 | 210 | 29 | 224 | 1.83e-18 | 81.6 |
| Msa0865320 | MtrunA17_Chr8g0386001 | 26.761 | 213 | 136 | 5 | 3 | 210 | 33 | 230 | 6.89e-18 | 80.5 |
| Msa0865320 | MtrunA17_Chr3g0131961 | 27.572 | 243 | 140 | 7 | 3 | 229 | 34 | 256 | 2.46e-17 | 79.0 |
| Msa0865320 | MtrunA17_Chr3g0126411 | 26.941 | 219 | 139 | 5 | 2 | 213 | 29 | 233 | 3.16e-17 | 78.6 |
| Msa0865320 | MtrunA17_Chr8g0359261 | 29.577 | 213 | 124 | 7 | 2 | 207 | 37 | 230 | 3.39e-17 | 78.2 |
| Msa0865320 | MtrunA17_Chr5g0444031 | 28.936 | 235 | 134 | 6 | 3 | 228 | 53 | 263 | 8.44e-17 | 77.4 |
| Msa0865320 | MtrunA17_Chr7g0215601 | 33.333 | 180 | 97 | 6 | 58 | 228 | 78 | 243 | 4.69e-16 | 75.1 |
| Msa0865320 | MtrunA17_Chr3g0126421 | 26.027 | 219 | 141 | 5 | 2 | 213 | 29 | 233 | 6.14e-16 | 74.7 |
| Msa0865320 | MtrunA17_Chr8g0386011 | 29.787 | 188 | 120 | 5 | 4 | 190 | 34 | 210 | 7.57e-16 | 74.7 |
| Msa0865320 | MtrunA17_Chr5g0428281 | 31.282 | 195 | 115 | 7 | 3 | 193 | 34 | 213 | 1.06e-14 | 71.6 |
| Msa0865320 | MtrunA17_Chr2g0278491 | 28.358 | 201 | 128 | 6 | 26 | 224 | 1 | 187 | 1.51e-14 | 70.9 |
| Msa0865320 | MtrunA17_Chr7g0214181 | 29.167 | 216 | 131 | 7 | 3 | 215 | 33 | 229 | 2.46e-13 | 67.8 |
| Msa0865320 | MtrunA17_Chr3g0131951 | 22.553 | 235 | 148 | 6 | 3 | 227 | 95 | 305 | 3.49e-13 | 68.2 |
| Msa0865320 | MtrunA17_Chr7g0214191 | 29.798 | 198 | 122 | 7 | 3 | 197 | 33 | 216 | 5.60e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0865320 | AT5G62850.1 | 38.053 | 226 | 116 | 6 | 1 | 221 | 30 | 236 | 4.77e-41 | 141 |
| Msa0865320 | AT4G10850.1 | 36.555 | 238 | 121 | 8 | 3 | 225 | 34 | 256 | 3.35e-37 | 131 |
| Msa0865320 | AT5G62850.2 | 39.665 | 179 | 89 | 5 | 1 | 174 | 30 | 194 | 1.89e-32 | 118 |
| Msa0865320 | AT1G66770.1 | 33.772 | 228 | 134 | 6 | 4 | 224 | 35 | 252 | 6.31e-32 | 118 |
| Msa0865320 | AT3G28007.1 | 41.436 | 181 | 89 | 4 | 18 | 194 | 47 | 214 | 9.17e-32 | 117 |
| Msa0865320 | AT5G40260.1 | 35.533 | 197 | 111 | 5 | 3 | 194 | 32 | 217 | 8.22e-28 | 106 |
| Msa0865320 | AT4G15920.1 | 34.335 | 233 | 124 | 9 | 3 | 229 | 29 | 238 | 5.60e-27 | 104 |
| Msa0865320 | AT1G21460.1 | 35.470 | 234 | 120 | 8 | 2 | 225 | 28 | 240 | 9.24e-26 | 101 |
| Msa0865320 | AT5G40260.2 | 35.028 | 177 | 99 | 5 | 3 | 174 | 32 | 197 | 6.56e-24 | 95.9 |
| Msa0865320 | AT3G16690.1 | 33.168 | 202 | 103 | 8 | 3 | 193 | 29 | 209 | 4.65e-22 | 91.3 |
| Msa0865320 | AT3G16690.3 | 33.168 | 202 | 103 | 8 | 3 | 193 | 64 | 244 | 6.63e-22 | 91.7 |
| Msa0865320 | AT1G21460.2 | 37.427 | 171 | 82 | 4 | 2 | 164 | 28 | 181 | 6.08e-20 | 85.1 |
| Msa0865320 | AT5G13170.1 | 27.500 | 240 | 149 | 7 | 3 | 237 | 35 | 254 | 1.54e-19 | 85.9 |
| Msa0865320 | AT4G25010.1 | 28.807 | 243 | 149 | 9 | 3 | 232 | 33 | 264 | 1.70e-19 | 85.5 |
| Msa0865320 | AT5G23660.1 | 30.833 | 240 | 144 | 10 | 3 | 237 | 35 | 257 | 6.38e-19 | 84.0 |
| Msa0865320 | AT5G53190.1 | 28.750 | 240 | 136 | 8 | 3 | 222 | 30 | 254 | 1.90e-18 | 82.4 |
| Msa0865320 | AT5G50800.1 | 27.189 | 217 | 139 | 6 | 3 | 213 | 33 | 236 | 1.81e-17 | 80.1 |
| Msa0865320 | AT2G39060.1 | 37.795 | 127 | 71 | 2 | 109 | 235 | 129 | 247 | 1.16e-16 | 77.4 |
| Msa0865320 | AT3G14770.1 | 30.303 | 198 | 116 | 5 | 2 | 193 | 37 | 218 | 5.64e-16 | 75.1 |
| Msa0865320 | AT5G50790.1 | 29.319 | 191 | 118 | 6 | 3 | 190 | 33 | 209 | 6.65e-15 | 72.8 |
| Msa0865320 | AT3G48740.1 | 28.085 | 235 | 147 | 10 | 3 | 232 | 35 | 252 | 2.28e-14 | 71.2 |
Find 50 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGCAACCGGACAGAATT+TGG | 0.182213 | 5_4:+65968747 | Msa0865320:CDS |
| TCTCTGGCTCTATTTCTTAA+TGG | 0.196338 | 5_4:+65971340 | Msa0865320:CDS |
| TTGCAGATCAGTAGTGTTAT+TGG | 0.252283 | 5_4:+65971520 | Msa0865320:intron |
| CAACGTTTAATTGTTTGTTT+TGG | 0.284381 | 5_4:+65968705 | Msa0865320:CDS |
| GGATTTGGAACCGTTGGATT+TGG | 0.287514 | 5_4:-65971676 | None:intergenic |
| TTTGATGGAATCAGTTTCAT+TGG | 0.326254 | 5_4:+65968797 | Msa0865320:CDS |
| GTAGACTGCACAACTGGATT+TGG | 0.327744 | 5_4:-65971691 | None:intergenic |
| GCAGGATATGTTACCTATTA+CGG | 0.337809 | 5_4:+65968443 | None:intergenic |
| TCTACAATCACAGTTCAAAT+AGG | 0.383070 | 5_4:+65971709 | Msa0865320:CDS |
| TGTGCAACCGGACAGAATTT+GGG | 0.384414 | 5_4:+65968748 | Msa0865320:CDS |
| AAAGAAAAGCTTAAACTGTC+TGG | 0.397028 | 5_4:+65969258 | Msa0865320:CDS |
| TGAGAGGAAGAATCCGTAAT+AGG | 0.407761 | 5_4:-65968456 | None:intergenic |
| CGGACAGAATTTGGGTCGTC+GGG | 0.413273 | 5_4:+65968756 | Msa0865320:CDS |
| CATGCCATTCTGCCCCTCTC+TGG | 0.413948 | 5_4:+65971324 | Msa0865320:CDS |
| GTGATTGTAGACTGCACAAC+TGG | 0.422184 | 5_4:-65971697 | None:intergenic |
| TTACTTACCATGACCGTAAG+AGG | 0.443764 | 5_4:-65969393 | None:intergenic |
| CCCTACCAAGAGGACATTAC+CGG | 0.451323 | 5_4:+65969326 | Msa0865320:CDS |
| AGTGTTATTGGAGCAATCTC+AGG | 0.457774 | 5_4:+65971532 | Msa0865320:CDS |
| CCCCTTCGACATTTATCTCC+TGG | 0.464221 | 5_4:+65971393 | Msa0865320:CDS |
| TATTTCTTAATGGATTGTGT+TGG | 0.498956 | 5_4:+65971350 | Msa0865320:CDS |
| TATGTATGTGTCTCCTCTTA+CGG | 0.518051 | 5_4:+65969380 | Msa0865320:CDS |
| AGATGACAAATAATACCAAC+CGG | 0.522995 | 5_4:-65969345 | None:intergenic |
| ACCAACCGGTAATGTCCTCT+TGG | 0.523303 | 5_4:-65969331 | None:intergenic |
| ACAACTGGATTTGGAACCGT+TGG | 0.523673 | 5_4:-65971682 | None:intergenic |
| TGTGTCTCCTCTTACGGTCA+TGG | 0.525131 | 5_4:+65969386 | Msa0865320:CDS |
| GATGTGGAGGAGTTCAAGTC+AGG | 0.527431 | 5_4:+65968668 | Msa0865320:CDS |
| AGAGCCAGAGAGGGGCAGAA+TGG | 0.527465 | 5_4:-65971328 | None:intergenic |
| TATGTGCTAACGACAAAGAA+GGG | 0.528690 | 5_4:+65968858 | Msa0865320:CDS |
| CCGGACAGAATTTGGGTCGT+CGG | 0.537548 | 5_4:+65968755 | Msa0865320:CDS |
| ATATGTGCTAACGACAAAGA+AGG | 0.538405 | 5_4:+65968857 | Msa0865320:CDS |
| ACCGGTAATGTCCTCTTGGT+AGG | 0.540433 | 5_4:-65969327 | None:intergenic |
| AATTATAAAGAATAGGGATG+TGG | 0.543473 | 5_4:+65968652 | Msa0865320:CDS |
| ATTAAGAAATAGAGCCAGAG+AGG | 0.552878 | 5_4:-65971338 | None:intergenic |
| TACAAAGATTTAGAAAAGCA+AGG | 0.553198 | 5_4:-65969290 | None:intergenic |
| ACCAGGAGATAAATGTCGAA+GGG | 0.561408 | 5_4:-65971394 | None:intergenic |
| CCGGTAATGTCCTCTTGGTA+GGG | 0.573832 | 5_4:-65969326 | None:intergenic |
| TATAAAGAATAGGGATGTGG+AGG | 0.576434 | 5_4:+65968655 | Msa0865320:CDS |
| TACCAGGAGATAAATGTCGA+AGG | 0.582376 | 5_4:-65971395 | None:intergenic |
| CCGACGACCCAAATTCTGTC+CGG | 0.585395 | 5_4:-65968755 | None:intergenic |
| AGTTTAATTACATTGGTGAG+AGG | 0.589601 | 5_4:-65968472 | None:intergenic |
| ACAAAGATTTAGAAAAGCAA+GGG | 0.591293 | 5_4:-65969289 | None:intergenic |
| GGAGATAAATGTCGAAGGGG+TGG | 0.605182 | 5_4:-65971390 | None:intergenic |
| TTAAGAAATAGAGCCAGAGA+GGG | 0.621291 | 5_4:-65971337 | None:intergenic |
| TAATCATGTTCCAAATCCAA+CGG | 0.622243 | 5_4:+65971666 | Msa0865320:CDS |
| ACCAAGAGGACATTACCGGT+TGG | 0.660478 | 5_4:+65969330 | Msa0865320:CDS |
| GGACAGAATTTGGGTCGTCG+GGG | 0.664959 | 5_4:+65968757 | Msa0865320:CDS |
| ATGTGCTAACGACAAAGAAG+GGG | 0.666313 | 5_4:+65968859 | Msa0865320:CDS |
| TAGATTATGACCCTACCAAG+AGG | 0.671508 | 5_4:+65969316 | Msa0865320:CDS |
| CCAGGAGATAAATGTCGAAG+GGG | 0.674271 | 5_4:-65971393 | None:intergenic |
| TAAGAAATAGAGCCAGAGAG+GGG | 0.699677 | 5_4:-65971336 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTTATAATTTAATTA+AGG | - | chr5_4:65969940-65969959 | None:intergenic | 0.0% |
| !!! | TTTATAATTTTTTTCATAGT+TGG | - | chr5_4:65968641-65968660 | None:intergenic | 10.0% |
| !! | TGAAAAAAATTATAAAGAAT+AGG | + | chr5_4:65968645-65968664 | Msa0865320:CDS | 10.0% |
| !! | GAAAAAAATTATAAAGAATA+GGG | + | chr5_4:65968646-65968665 | Msa0865320:CDS | 10.0% |
| !! | CATAATATATAAAGTAATAA+TGG | - | chr5_4:65969429-65969448 | None:intergenic | 10.0% |
| !!! | TAAAGATTTTAATAAAATGA+AGG | - | chr5_4:65969788-65969807 | None:intergenic | 10.0% |
| !!! | TTTTATTATTGTTGATAAAA+CGG | + | chr5_4:65970094-65970113 | Msa0865320:intron | 10.0% |
| !! | ATTAAAATATACATATATGT+TGG | + | chr5_4:65970198-65970217 | Msa0865320:intron | 10.0% |
| !! | ATATATATAAATAAATTACC+AGG | - | chr5_4:65971414-65971433 | None:intergenic | 10.0% |
| !!! | TATAATTTAATTAAGGTATC+AGG | - | chr5_4:65969933-65969952 | None:intergenic | 15.0% |
| !! | AATTTCATAAATAAGTATCA+CGG | + | chr5_4:65970119-65970138 | Msa0865320:intron | 15.0% |
| !!! | ATGTATATTTTAATTACAAC+AGG | - | chr5_4:65970192-65970211 | None:intergenic | 15.0% |
| !! | AAAAATGGTGTTTAAATATA+GGG | - | chr5_4:65970247-65970266 | None:intergenic | 15.0% |
| !! | TAAAAATGGTGTTTAAATAT+AGG | - | chr5_4:65970248-65970267 | None:intergenic | 15.0% |
| !!! | TATTATTTAGAAGTATGTTT+AGG | - | chr5_4:65970324-65970343 | None:intergenic | 15.0% |
| !! | TATATTGCTAAAATATTTGA+TGG | - | chr5_4:65970758-65970777 | None:intergenic | 15.0% |
| !!! | ATATTTTAGCAATATATCAA+TGG | + | chr5_4:65970762-65970781 | Msa0865320:intron | 15.0% |
| !!! | CAGATATTCTTTAAAAAAAA+TGG | - | chr5_4:65970973-65970992 | None:intergenic | 15.0% |
| !! | AATTTCACAATAATACAAAA+TGG | - | chr5_4:65971131-65971150 | None:intergenic | 15.0% |
| !!! | CAAATAAGAGTTTAATTTAT+GGG | - | chr5_4:65971220-65971239 | None:intergenic | 15.0% |
| !!! | ACAAATAAGAGTTTAATTTA+TGG | - | chr5_4:65971221-65971240 | None:intergenic | 15.0% |
| !! | GAAAAAGAGTTTAATTACAT+TGG | - | chr5_4:65968482-65968501 | None:intergenic | 20.0% |
| !! | TGCAATTCAATCAAATAATT+AGG | - | chr5_4:65968616-65968635 | None:intergenic | 20.0% |
| !!! | AACGTTTAATTGTTTGTTTT+GGG | + | chr5_4:65968706-65968725 | Msa0865320:CDS | 20.0% |
| !!! | TTACTTAATACTTCTTTTGA+TGG | + | chr5_4:65968782-65968801 | Msa0865320:CDS | 20.0% |
| !!! | ATTTTTTGTTTAAAGAGGTT+AGG | - | chr5_4:65969110-65969129 | None:intergenic | 20.0% |
| !!! | CTTCAATTTTTTGTTTAAAG+AGG | - | chr5_4:65969115-65969134 | None:intergenic | 20.0% |
| !!! | TCTATTTTACATTTTAAGTG+TGG | - | chr5_4:65969519-65969538 | None:intergenic | 20.0% |
| !! | TAACTTCTACTATAAAGAAT+TGG | + | chr5_4:65969616-65969635 | Msa0865320:intron | 20.0% |
| !!! | AATTAGATAATTAGCTTTGT+GGG | - | chr5_4:65969747-65969766 | None:intergenic | 20.0% |
| !!! | TAATTAGATAATTAGCTTTG+TGG | - | chr5_4:65969748-65969767 | None:intergenic | 20.0% |
| !! | TAAGAAAGAATGAATACAAT+GGG | - | chr5_4:65969903-65969922 | None:intergenic | 20.0% |
| !! | TTAAGAAAGAATGAATACAA+TGG | - | chr5_4:65969904-65969923 | None:intergenic | 20.0% |
| !!! | ACTACTCTAAAAAAAATTGA+CGG | + | chr5_4:65969959-65969978 | Msa0865320:intron | 20.0% |
| !!! | TTATTGGTTTAGACTAAATA+AGG | + | chr5_4:65970032-65970051 | Msa0865320:intron | 20.0% |
| !!! | TATTGGTTTAGACTAAATAA+GGG | + | chr5_4:65970033-65970052 | Msa0865320:intron | 20.0% |
| !! | ATTTCATAAATAAGTATCAC+GGG | + | chr5_4:65970120-65970139 | Msa0865320:intron | 20.0% |
| !!! | AGACAACTTTTTAGTAAAAA+TGG | - | chr5_4:65970262-65970281 | None:intergenic | 20.0% |
| !!! | ACTTGTCTTGATTTTTTTAT+AGG | + | chr5_4:65970350-65970369 | Msa0865320:intron | 20.0% |
| !! | AATAATAGAGTCAATACAAT+TGG | + | chr5_4:65970401-65970420 | Msa0865320:intron | 20.0% |
| !! | ATAATAGAGTCAATACAATT+GGG | + | chr5_4:65970402-65970421 | Msa0865320:intron | 20.0% |
| !! | AAAAATGTGAAAAATGCAAA+TGG | + | chr5_4:65970603-65970622 | Msa0865320:intron | 20.0% |
| !!! | AAATACCTTTTCTTTTTGTT+AGG | - | chr5_4:65970917-65970936 | None:intergenic | 20.0% |
| !!! | AAAAGAAAAGGTATTTTCAT+AGG | + | chr5_4:65970921-65970940 | Msa0865320:intron | 20.0% |
| !! | GAATATCTGATATATCTTAA+AGG | + | chr5_4:65970984-65971003 | Msa0865320:intron | 20.0% |
| !! | TTGGTGGAAATAAATTATTA+AGG | + | chr5_4:65971040-65971059 | Msa0865320:intron | 20.0% |
| !! | TGGTGGAAATAAATTATTAA+GGG | + | chr5_4:65971041-65971060 | Msa0865320:intron | 20.0% |
| !! | TAATATGGATAGTTAAAGAA+TGG | - | chr5_4:65971191-65971210 | None:intergenic | 20.0% |
| !!! | TCATACTATATGCTTATTTT+TGG | + | chr5_4:65971566-65971585 | Msa0865320:CDS | 20.0% |
| ! | AATTATAAAGAATAGGGATG+TGG | + | chr5_4:65968652-65968671 | Msa0865320:CDS | 25.0% |
| !! | CAACGTTTAATTGTTTGTTT+TGG | + | chr5_4:65968705-65968724 | Msa0865320:CDS | 25.0% |
| !! | TTTATTTAAGACCGTATAGT+TGG | + | chr5_4:65969007-65969026 | Msa0865320:intron | 25.0% |
| ! | TTGAATAAATAACAGCTGAT+AGG | + | chr5_4:65969160-65969179 | Msa0865320:intron | 25.0% |
| !! | TATTCTTTTACCCTAATTTC+AGG | + | chr5_4:65969227-65969246 | Msa0865320:intron | 25.0% |
| ! | ACAAAGATTTAGAAAAGCAA+GGG | - | chr5_4:65969292-65969311 | None:intergenic | 25.0% |
| ! | TACAAAGATTTAGAAAAGCA+AGG | - | chr5_4:65969293-65969312 | None:intergenic | 25.0% |
| !! | ACTACAAAGATATTTTCACA+TGG | + | chr5_4:65969593-65969612 | Msa0865320:intron | 25.0% |
| ! | AATTGTACAACTGAAAAAAC+TGG | - | chr5_4:65969718-65969737 | None:intergenic | 25.0% |
| !!! | ATTAGATAATTAGCTTTGTG+GGG | - | chr5_4:65969746-65969765 | None:intergenic | 25.0% |
| !! | CTACTCTAAAAAAAATTGAC+GGG | + | chr5_4:65969960-65969979 | Msa0865320:intron | 25.0% |
| ! | ACAAAGGATAAAACTGTTAT+TGG | + | chr5_4:65970016-65970035 | Msa0865320:intron | 25.0% |
| ! | GAAAAACTCAATCATATTCT+AGG | + | chr5_4:65970069-65970088 | Msa0865320:intron | 25.0% |
| !!! | TTGTATTGACTCTATTATTC+TGG | - | chr5_4:65970400-65970419 | None:intergenic | 25.0% |
| ! | AACAAATTTCCTAAGTTGTA+GGG | + | chr5_4:65970664-65970683 | Msa0865320:intron | 25.0% |
| ! | TACCTATGAAAATACCAATT+CGG | - | chr5_4:65970846-65970865 | None:intergenic | 25.0% |
| ! | CAATCACATATTACTACTAA+AGG | + | chr5_4:65970870-65970889 | Msa0865320:intron | 25.0% |
| ! | TATATCTTAAAGGTGAGATT+TGG | + | chr5_4:65970994-65971013 | Msa0865320:intron | 25.0% |
| ! | ATGTAAAATACACAACTAGT+TGG | + | chr5_4:65971021-65971040 | Msa0865320:intron | 25.0% |
| ! | GGTGGAAATAAATTATTAAG+GGG | + | chr5_4:65971042-65971061 | Msa0865320:intron | 25.0% |
| ! | ATTTATGGGTCAATCTAATA+TGG | - | chr5_4:65971206-65971225 | None:intergenic | 25.0% |
| !!! | TATTTCTTAATGGATTGTGT+TGG | + | chr5_4:65971350-65971369 | Msa0865320:CDS | 25.0% |
| ! | GTTTATGATTGTAGTTCAAT+TGG | + | chr5_4:65971442-65971461 | Msa0865320:intron | 25.0% |
| AGTTTAATTACATTGGTGAG+AGG | - | chr5_4:65968475-65968494 | None:intergenic | 30.0% | |
| ATAGACCATAGTAAAACGAA+GGG | + | chr5_4:65968588-65968607 | Msa0865320:intron | 30.0% | |
| TTTGATGGAATCAGTTTCAT+TGG | + | chr5_4:65968797-65968816 | Msa0865320:CDS | 30.0% | |
| !! | TTTCATTGGACTTGTTTTCA+TGG | + | chr5_4:65968811-65968830 | Msa0865320:CDS | 30.0% |
| TTATCCATGAAATGTTAGCT+TGG | + | chr5_4:65968956-65968975 | Msa0865320:intron | 30.0% | |
| AGTATAGAGAAGAATAGGAA+TGG | - | chr5_4:65969202-65969221 | None:intergenic | 30.0% | |
| TAGTGAGTATAGAGAAGAAT+AGG | - | chr5_4:65969207-65969226 | None:intergenic | 30.0% | |
| TTGAGATGATCCTGAAATTA+GGG | - | chr5_4:65969240-65969259 | None:intergenic | 30.0% | |
| ! | TTTGAGATGATCCTGAAATT+AGG | - | chr5_4:65969241-65969260 | None:intergenic | 30.0% |
| AAAGAAAAGCTTAAACTGTC+TGG | + | chr5_4:65969258-65969277 | Msa0865320:CDS | 30.0% | |
| AGATGACAAATAATACCAAC+CGG | - | chr5_4:65969348-65969367 | None:intergenic | 30.0% | |
| ! | GTTGTTAATTTTCCCATGAT+GGG | + | chr5_4:65969659-65969678 | Msa0865320:intron | 30.0% |
| !! | TTAGATAATTAGCTTTGTGG+GGG | - | chr5_4:65969745-65969764 | None:intergenic | 30.0% |
| !! | GATAATTAGATGGTGGAAAT+GGG | - | chr5_4:65969850-65969869 | None:intergenic | 30.0% |
| !! | AGATAATTAGATGGTGGAAA+TGG | - | chr5_4:65969851-65969870 | None:intergenic | 30.0% |
| ATAGGCGTTAGATAATTAGA+TGG | - | chr5_4:65969860-65969879 | None:intergenic | 30.0% | |
| !! | ACTTGGTTGTTATTTAGAGA+AGG | - | chr5_4:65969990-65970009 | None:intergenic | 30.0% |
| TTATCCTTTGTGCTTAAACT+TGG | - | chr5_4:65970007-65970026 | None:intergenic | 30.0% | |
| TTAGACTAAATAAGGGCAAA+TGG | + | chr5_4:65970040-65970059 | Msa0865320:intron | 30.0% | |
| TAGACTAAATAAGGGCAAAT+GGG | + | chr5_4:65970041-65970060 | Msa0865320:intron | 30.0% | |
| ! | TACAACAGGTTTCTAGAAAA+CGG | - | chr5_4:65970178-65970197 | None:intergenic | 30.0% |
| ATGGTGTTTAAATATAGGGA+CGG | - | chr5_4:65970243-65970262 | None:intergenic | 30.0% | |
| CAACAAATTTCCTAAGTTGT+AGG | + | chr5_4:65970663-65970682 | Msa0865320:intron | 30.0% | |
| GCATGAATAAGCATAGTATT+TGG | + | chr5_4:65970703-65970722 | Msa0865320:intron | 30.0% | |
| AGCATAGTATTTGGTACAAA+AGG | + | chr5_4:65970712-65970731 | Msa0865320:intron | 30.0% | |
| ! | CTTTTTGTTAGGTAGCTTAA+TGG | - | chr5_4:65970906-65970925 | None:intergenic | 30.0% |
| AGCTACCTAACAAAAAGAAA+AGG | + | chr5_4:65970909-65970928 | Msa0865320:intron | 30.0% | |
| TAAAATACACAACTAGTTGG+TGG | + | chr5_4:65971024-65971043 | Msa0865320:intron | 30.0% | |
| AAATGACACTAGTTCACATT+TGG | + | chr5_4:65971164-65971183 | Msa0865320:intron | 30.0% | |
| CTACGTTACATATAATGAAC+AGG | + | chr5_4:65971270-65971289 | Msa0865320:intron | 30.0% | |
| !!! | ATATGCTTATTTTTGGTGCA+AGG | + | chr5_4:65971573-65971592 | Msa0865320:CDS | 30.0% |
| !!! | TATGCTTATTTTTGGTGCAA+GGG | + | chr5_4:65971574-65971593 | Msa0865320:CDS | 30.0% |
| TAATCATGTTCCAAATCCAA+CGG | + | chr5_4:65971666-65971685 | Msa0865320:CDS | 30.0% | |
| TCTACAATCACAGTTCAAAT+AGG | + | chr5_4:65971709-65971728 | Msa0865320:CDS | 30.0% | |
| CATAGACCATAGTAAAACGA+AGG | + | chr5_4:65968587-65968606 | Msa0865320:intron | 35.0% | |
| TATAAAGAATAGGGATGTGG+AGG | + | chr5_4:65968655-65968674 | Msa0865320:CDS | 35.0% | |
| !!! | TGTTTGTTTTGGGTATGCTT+TGG | + | chr5_4:65968716-65968735 | Msa0865320:CDS | 35.0% |
| ATATGTGCTAACGACAAAGA+AGG | + | chr5_4:65968857-65968876 | Msa0865320:CDS | 35.0% | |
| TATGTGCTAACGACAAAGAA+GGG | + | chr5_4:65968858-65968877 | Msa0865320:CDS | 35.0% | |
| ACTGTAGATAGCCAACTATA+CGG | - | chr5_4:65969021-65969040 | None:intergenic | 35.0% | |
| GTATTATCACTCAAGCAAAG+TGG | - | chr5_4:65969076-65969095 | None:intergenic | 35.0% | |
| ! | TGAGCAACTTGATTTTTGCT+GGG | - | chr5_4:65969139-65969158 | None:intergenic | 35.0% |
| ! | TTGAGCAACTTGATTTTTGC+TGG | - | chr5_4:65969140-65969159 | None:intergenic | 35.0% |
| TATGTATGTGTCTCCTCTTA+CGG | + | chr5_4:65969380-65969399 | Msa0865320:CDS | 35.0% | |
| CTACTATAAAGAATTGGTGC+AGG | + | chr5_4:65969622-65969641 | Msa0865320:intron | 35.0% | |
| ! | GGTTGTTAATTTTCCCATGA+TGG | + | chr5_4:65969658-65969677 | Msa0865320:intron | 35.0% |
| ! | GAAATGGGTATCAGGATTTT+CGG | - | chr5_4:65969835-65969854 | None:intergenic | 35.0% |
| GAGTGATGAATCAAAGAGAT+AGG | - | chr5_4:65969878-65969897 | None:intergenic | 35.0% | |
| ACAACCAAGTTTAAGCACAA+AGG | + | chr5_4:65970000-65970019 | Msa0865320:intron | 35.0% | |
| ! | ACAACAGGTTTCTAGAAAAC+GGG | - | chr5_4:65970177-65970196 | None:intergenic | 35.0% |
| TGTTTAAATATAGGGACGGA+CGG | - | chr5_4:65970239-65970258 | None:intergenic | 35.0% | |
| GATGGCTATGATTGAAGAAT+GGG | - | chr5_4:65970740-65970759 | None:intergenic | 35.0% | |
| TGATGGCTATGATTGAAGAA+TGG | - | chr5_4:65970741-65970760 | None:intergenic | 35.0% | |
| ! | AATTAGAGCTTTTCCCATGA+TGG | + | chr5_4:65970787-65970806 | Msa0865320:intron | 35.0% |
| ! | ATTAGAGCTTTTCCCATGAT+GGG | + | chr5_4:65970788-65970807 | Msa0865320:intron | 35.0% |
| ! | CTCTCTAATTTTCCCATCAT+GGG | - | chr5_4:65970803-65970822 | None:intergenic | 35.0% |
| ! | ACTCTCTAATTTTCCCATCA+TGG | - | chr5_4:65970804-65970823 | None:intergenic | 35.0% |
| CTATGAAAATACCAATTCGG+TGG | - | chr5_4:65970843-65970862 | None:intergenic | 35.0% | |
| ! | CACCGAATTGGTATTTTCAT+AGG | + | chr5_4:65970841-65970860 | Msa0865320:intron | 35.0% |
| TAACGTAGCATCAAGAAGTT+TGG | - | chr5_4:65971258-65971277 | None:intergenic | 35.0% | |
| TTAAGAAATAGAGCCAGAGA+GGG | - | chr5_4:65971340-65971359 | None:intergenic | 35.0% | |
| ATTAAGAAATAGAGCCAGAG+AGG | - | chr5_4:65971341-65971360 | None:intergenic | 35.0% | |
| !! | TCTCTGGCTCTATTTCTTAA+TGG | + | chr5_4:65971340-65971359 | Msa0865320:CDS | 35.0% |
| TTGCAGATCAGTAGTGTTAT+TGG | + | chr5_4:65971520-65971539 | Msa0865320:intron | 35.0% | |
| TGAGAGGAAGAATCCGTAAT+AGG | - | chr5_4:65968459-65968478 | None:intergenic | 40.0% | |
| ! | AGGAACCCTTCGTTTTACTA+TGG | - | chr5_4:65968596-65968615 | None:intergenic | 40.0% |
| ! | TGGAAATGCTTTTGTGCAAC+CGG | + | chr5_4:65968736-65968755 | Msa0865320:CDS | 40.0% |
| ATGTGCTAACGACAAAGAAG+GGG | + | chr5_4:65968859-65968878 | Msa0865320:CDS | 40.0% | |
| AGCACCAAGCTAACATTTCA+TGG | - | chr5_4:65968963-65968982 | None:intergenic | 40.0% | |
| !! | AGCTTGGTGCTTTGTAGTAT+AGG | + | chr5_4:65968972-65968991 | Msa0865320:intron | 40.0% |
| ACTCAAGCAAAGTGGAGATT+AGG | - | chr5_4:65969068-65969087 | None:intergenic | 40.0% | |
| TAGATTATGACCCTACCAAG+AGG | + | chr5_4:65969316-65969335 | Msa0865320:CDS | 40.0% | |
| TTACTTACCATGACCGTAAG+AGG | - | chr5_4:65969396-65969415 | None:intergenic | 40.0% | |
| AGAATTGGTGCAGGTTATAG+TGG | + | chr5_4:65969631-65969650 | Msa0865320:intron | 40.0% | |
| GAATTGGTGCAGGTTATAGT+GGG | + | chr5_4:65969632-65969651 | Msa0865320:intron | 40.0% | |
| ACTGAAAAAACTGGCAGTAC+TGG | - | chr5_4:65969709-65969728 | None:intergenic | 40.0% | |
| GGCGTTAGATAATTAGATGG+TGG | - | chr5_4:65969857-65969876 | None:intergenic | 40.0% | |
| GCAAATGGTGCTTACATAGA+AGG | + | chr5_4:65970618-65970637 | Msa0865320:intron | 40.0% | |
| TAAACGTGTCCCTACAACTT+AGG | - | chr5_4:65970676-65970695 | None:intergenic | 40.0% | |
| ! | AATTCGGTGGCATTTATGGT+GGG | - | chr5_4:65970830-65970849 | None:intergenic | 40.0% |
| ! | TACCAATTCGGTGGCATTTA+TGG | - | chr5_4:65970834-65970853 | None:intergenic | 40.0% |
| TAAGAAATAGAGCCAGAGAG+GGG | - | chr5_4:65971339-65971358 | None:intergenic | 40.0% | |
| ACCAGGAGATAAATGTCGAA+GGG | - | chr5_4:65971397-65971416 | None:intergenic | 40.0% | |
| TACCAGGAGATAAATGTCGA+AGG | - | chr5_4:65971398-65971417 | None:intergenic | 40.0% | |
| ! | AGTGTTATTGGAGCAATCTC+AGG | + | chr5_4:65971532-65971551 | Msa0865320:CDS | 40.0% |
| TTGTGCAACCGGACAGAATT+TGG | + | chr5_4:65968747-65968766 | Msa0865320:CDS | 45.0% | |
| TGTGCAACCGGACAGAATTT+GGG | + | chr5_4:65968748-65968767 | Msa0865320:CDS | 45.0% | |
| !! | AGATGGTGGAAATGGGTATC+AGG | - | chr5_4:65969843-65969862 | None:intergenic | 45.0% |
| ! | CAATTCGGTGGCATTTATGG+TGG | - | chr5_4:65970831-65970850 | None:intergenic | 45.0% |
| CACCATAAATGCCACCGAAT+TGG | + | chr5_4:65970829-65970848 | Msa0865320:intron | 45.0% | |
| CCAGGAGATAAATGTCGAAG+GGG | - | chr5_4:65971396-65971415 | None:intergenic | 45.0% | |
| ! | GGATTTGGAACCGTTGGATT+TGG | - | chr5_4:65971679-65971698 | None:intergenic | 45.0% |
| ! | ACAACTGGATTTGGAACCGT+TGG | - | chr5_4:65971685-65971704 | None:intergenic | 45.0% |
| GTAGACTGCACAACTGGATT+TGG | - | chr5_4:65971694-65971713 | None:intergenic | 45.0% | |
| GTGATTGTAGACTGCACAAC+TGG | - | chr5_4:65971700-65971719 | None:intergenic | 45.0% | |
| !! | ATAATATATAAAGTAATAAT+GGG | - | chr5_4:65969428-65969447 | None:intergenic | 5.0% |
| !!! | ATTTCAAAAATTTTAATAAA+AGG | + | chr5_4:65971092-65971111 | Msa0865320:intron | 5.0% |
| GATGTGGAGGAGTTCAAGTC+AGG | + | chr5_4:65968668-65968687 | Msa0865320:CDS | 50.0% | |
| CCGGTAATGTCCTCTTGGTA+GGG | - | chr5_4:65969329-65969348 | None:intergenic | 50.0% | |
| CCCTACCAAGAGGACATTAC+CGG | + | chr5_4:65969326-65969345 | Msa0865320:CDS | 50.0% | |
| ACCGGTAATGTCCTCTTGGT+AGG | - | chr5_4:65969330-65969349 | None:intergenic | 50.0% | |
| ACCAAGAGGACATTACCGGT+TGG | + | chr5_4:65969330-65969349 | Msa0865320:CDS | 50.0% | |
| ACCAACCGGTAATGTCCTCT+TGG | - | chr5_4:65969334-65969353 | None:intergenic | 50.0% | |
| TGTGTCTCCTCTTACGGTCA+TGG | + | chr5_4:65969386-65969405 | Msa0865320:CDS | 50.0% | |
| ! | TGGTGCAGGTTATAGTGGGA+AGG | + | chr5_4:65969636-65969655 | Msa0865320:intron | 50.0% |
| ! | GGTGCAGGTTATAGTGGGAA+GGG | + | chr5_4:65969637-65969656 | Msa0865320:intron | 50.0% |
| ACTTCGGCTTCTCCCATCAT+GGG | - | chr5_4:65969674-65969693 | None:intergenic | 50.0% | |
| CTGGCAATAACCGGTCACTT+CGG | - | chr5_4:65969690-65969709 | None:intergenic | 50.0% | |
| !! | CTGGCAGTACTGGCAATAAC+CGG | - | chr5_4:65969699-65969718 | None:intergenic | 50.0% |
| GGAGATAAATGTCGAAGGGG+TGG | - | chr5_4:65971393-65971412 | None:intergenic | 50.0% | |
| CCCCTTCGACATTTATCTCC+TGG | + | chr5_4:65971393-65971412 | Msa0865320:CDS | 50.0% | |
| CCGACGACCCAAATTCTGTC+CGG | - | chr5_4:65968758-65968777 | None:intergenic | 55.0% | |
| CCGGACAGAATTTGGGTCGT+CGG | + | chr5_4:65968755-65968774 | Msa0865320:CDS | 55.0% | |
| CGGACAGAATTTGGGTCGTC+GGG | + | chr5_4:65968756-65968775 | Msa0865320:CDS | 55.0% | |
| GGACAGAATTTGGGTCGTCG+GGG | + | chr5_4:65968757-65968776 | Msa0865320:CDS | 55.0% | |
| CACTTCGGCTTCTCCCATCA+TGG | - | chr5_4:65969675-65969694 | None:intergenic | 55.0% | |
| ATGGGAGAAGCCGAAGTGAC+CGG | + | chr5_4:65969677-65969696 | Msa0865320:intron | 55.0% | |
| CATGCCATTCTGCCCCTCTC+TGG | + | chr5_4:65971324-65971343 | Msa0865320:CDS | 60.0% | |
| AGAGCCAGAGAGGGGCAGAA+TGG | - | chr5_4:65971331-65971350 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 65968447 | 65971747 | 65968447 | ID=Msa0865320;Name=Msa0865320 |
| chr5_4 | mRNA | 65968447 | 65971747 | 65968447 | ID=Msa0865320-mRNA-1;Parent=Msa0865320;Name=Msa0865320-mRNA-1;_AED=0.18;_eAED=0.18;_QI=44|0|0|0.8|0.75|0.6|5|0|247 |
| chr5_4 | exon | 65968447 | 65968483 | 65968447 | ID=Msa0865320-mRNA-1:exon:20832;Parent=Msa0865320-mRNA-1 |
| chr5_4 | exon | 65968637 | 65968880 | 65968637 | ID=Msa0865320-mRNA-1:exon:20833;Parent=Msa0865320-mRNA-1 |
| chr5_4 | exon | 65969249 | 65969407 | 65969249 | ID=Msa0865320-mRNA-1:exon:20834;Parent=Msa0865320-mRNA-1 |
| chr5_4 | exon | 65971292 | 65971414 | 65971292 | ID=Msa0865320-mRNA-1:exon:20835;Parent=Msa0865320-mRNA-1 |
| chr5_4 | exon | 65971526 | 65971747 | 65971526 | ID=Msa0865320-mRNA-1:exon:20836;Parent=Msa0865320-mRNA-1 |
| chr5_4 | five_prime_UTR | 65968447 | 65968483 | 65968447 | ID=Msa0865320-mRNA-1:five_prime_utr;Parent=Msa0865320-mRNA-1 |
| chr5_4 | five_prime_UTR | 65968637 | 65968643 | 65968637 | ID=Msa0865320-mRNA-1:five_prime_utr;Parent=Msa0865320-mRNA-1 |
| chr5_4 | CDS | 65968644 | 65968880 | 65968644 | ID=Msa0865320-mRNA-1:cds;Parent=Msa0865320-mRNA-1 |
| chr5_4 | CDS | 65969249 | 65969407 | 65969249 | ID=Msa0865320-mRNA-1:cds;Parent=Msa0865320-mRNA-1 |
| chr5_4 | CDS | 65971292 | 65971414 | 65971292 | ID=Msa0865320-mRNA-1:cds;Parent=Msa0865320-mRNA-1 |
| chr5_4 | CDS | 65971526 | 65971747 | 65971526 | ID=Msa0865320-mRNA-1:cds;Parent=Msa0865320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
