Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192640 | RHN72570.1 | 68.571 | 140 | 13 | 2 | 1 | 110 | 10 | 148 | 4.65e-39 | 164 |
Msa1192640 | RHN72570.1 | 85.870 | 92 | 13 | 0 | 451 | 542 | 703 | 794 | 3.55e-41 | 170 |
Msa1192640 | RHN72570.1 | 86.228 | 334 | 36 | 2 | 125 | 458 | 285 | 608 | 0.0 | 581 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192640 | sp|Q9SSE9|JMJ25_ARATH | 38.811 | 286 | 145 | 4 | 194 | 458 | 410 | 686 | 2.13e-52 | 195 |
Msa1192640 | sp|Q9SSE9|JMJ25_ARATH | 62.366 | 93 | 35 | 0 | 450 | 542 | 774 | 866 | 1.55e-28 | 124 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa1192640 | TR | Jumonji |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012700 | Msa1192640 | 0.813162 | 2.943146e-51 | -8.615850e-47 |
Msa0013750 | Msa1192640 | 0.839030 | 2.021629e-57 | -8.615850e-47 |
Msa0014330 | Msa1192640 | 0.806790 | 6.931832e-50 | -8.615850e-47 |
Msa0015750 | Msa1192640 | 0.866297 | 3.161594e-65 | -8.615850e-47 |
Msa0016570 | Msa1192640 | 0.863178 | 2.995924e-64 | -8.615850e-47 |
Msa0016580 | Msa1192640 | 0.839351 | 1.669576e-57 | -8.615850e-47 |
Msa0092630 | Msa1192640 | 0.830895 | 2.269391e-55 | -8.615850e-47 |
Msa0102070 | Msa1192640 | 0.928819 | 1.682337e-92 | -8.615850e-47 |
Msa0107580 | Msa1192640 | 0.800608 | 1.330475e-48 | -8.615850e-47 |
Msa0110270 | Msa1192640 | 0.831968 | 1.235804e-55 | -8.615850e-47 |
Msa0111510 | Msa1192640 | 0.845740 | 3.363892e-59 | -8.615850e-47 |
Msa0604350 | Msa1192640 | 0.834178 | 3.483396e-56 | -8.615850e-47 |
Msa0636170 | Msa1192640 | 0.859439 | 4.132372e-63 | -8.615850e-47 |
Msa0639610 | Msa1192640 | 0.841759 | 3.911638e-58 | -8.615850e-47 |
Msa0668260 | Msa1192640 | 0.816471 | 5.437687e-52 | -8.615850e-47 |
Msa0678930 | Msa1192640 | 0.885832 | 5.786436e-72 | -8.615850e-47 |
Msa0688270 | Msa1192640 | 0.802350 | 5.848345e-49 | -8.615850e-47 |
Msa0689390 | Msa1192640 | 0.804119 | 2.517404e-49 | -8.615850e-47 |
Msa0694370 | Msa1192640 | 0.832646 | 8.395398e-56 | -8.615850e-47 |
Msa0697060 | Msa1192640 | 0.800694 | 1.278313e-48 | -8.615850e-47 |
Msa0725850 | Msa1192640 | 0.826221 | 3.055628e-54 | -8.615850e-47 |
Msa0726140 | Msa1192640 | 0.908051 | 2.608026e-81 | -8.615850e-47 |
Msa0729800 | Msa1192640 | 0.880323 | 6.031889e-70 | -8.615850e-47 |
Msa0731560 | Msa1192640 | 0.801202 | 1.006418e-48 | -8.615850e-47 |
Msa0732310 | Msa1192640 | 0.818724 | 1.687948e-52 | -8.615850e-47 |
Msa0732710 | Msa1192640 | 0.827251 | 1.734326e-54 | -8.615850e-47 |
Msa0733290 | Msa1192640 | 0.874056 | 9.101086e-68 | -8.615850e-47 |
Msa0735080 | Msa1192640 | 0.801959 | 7.040603e-49 | -8.615850e-47 |
Msa0741990 | Msa1192640 | 0.853055 | 3.077255e-61 | -8.615850e-47 |
Msa0743810 | Msa1192640 | 0.929192 | 9.879443e-93 | -8.615850e-47 |
Msa0745060 | Msa1192640 | 0.916510 | 1.633556e-85 | -8.615850e-47 |
Msa0764960 | Msa1192640 | 0.802052 | 6.736510e-49 | -8.615850e-47 |
Msa0766630 | Msa1192640 | 0.807734 | 4.374286e-50 | -8.615850e-47 |
Msa0767720 | Msa1192640 | 0.880965 | 3.553282e-70 | -8.615850e-47 |
Msa0777870 | Msa1192640 | 0.841005 | 6.176334e-58 | -8.615850e-47 |
Msa0779880 | Msa1192640 | 0.812601 | 3.905888e-51 | -8.615850e-47 |
Msa0783160 | Msa1192640 | 0.903210 | 4.387423e-79 | -8.615850e-47 |
Msa0784290 | Msa1192640 | 0.814359 | 1.603773e-51 | -8.615850e-47 |
Msa0784300 | Msa1192640 | 0.807684 | 4.482435e-50 | -8.615850e-47 |
Msa0787600 | Msa1192640 | 0.891997 | 2.382014e-74 | -8.615850e-47 |
Msa0789250 | Msa1192640 | 0.815734 | 7.942805e-52 | -8.615850e-47 |
Msa0808010 | Msa1192640 | 0.903432 | 3.490196e-79 | -8.615850e-47 |
Msa0808020 | Msa1192640 | 0.900195 | 9.343503e-78 | -8.615850e-47 |
Msa0811080 | Msa1192640 | 0.842211 | 2.970460e-58 | -8.615850e-47 |
Msa0811270 | Msa1192640 | 0.830512 | 2.816622e-55 | -8.615850e-47 |
Msa0824000 | Msa1192640 | 0.821436 | 4.041376e-53 | -8.615850e-47 |
Msa0824600 | Msa1192640 | 0.812947 | 3.280274e-51 | -8.615850e-47 |
Msa0825860 | Msa1192640 | 0.924971 | 3.446116e-90 | -8.615850e-47 |
Msa0833290 | Msa1192640 | 0.863991 | 1.675737e-64 | -8.615850e-47 |
Msa0833300 | Msa1192640 | 0.849138 | 3.918207e-60 | -8.615850e-47 |
Msa0123810 | Msa1192640 | 0.817160 | 3.808391e-52 | -8.615850e-47 |
Msa0124100 | Msa1192640 | 0.828848 | 7.154304e-55 | -8.615850e-47 |
Msa0124150 | Msa1192640 | 0.813080 | 3.067276e-51 | -8.615850e-47 |
Msa0142220 | Msa1192640 | 0.867580 | 1.232920e-65 | -8.615850e-47 |
Msa0145750 | Msa1192640 | 0.866006 | 3.906767e-65 | -8.615850e-47 |
Msa0153910 | Msa1192640 | 0.876450 | 1.383152e-68 | -8.615850e-47 |
Msa0188460 | Msa1192640 | 0.811985 | 5.324009e-51 | -8.615850e-47 |
Msa0192970 | Msa1192640 | 0.829066 | 6.337405e-55 | -8.615850e-47 |
Msa0200000 | Msa1192640 | 0.861657 | 8.792388e-64 | -8.615850e-47 |
Msa0200940 | Msa1192640 | 0.810009 | 1.426093e-50 | -8.615850e-47 |
Msa0214370 | Msa1192640 | 0.800539 | 1.374302e-48 | -8.615850e-47 |
Msa0214380 | Msa1192640 | 0.805867 | 1.084993e-49 | -8.615850e-47 |
Msa0227480 | Msa1192640 | 0.889829 | 1.705280e-73 | -8.615850e-47 |
Msa0231000 | Msa1192640 | 0.841223 | 5.411837e-58 | -8.615850e-47 |
Msa0232850 | Msa1192640 | 0.869276 | 3.495072e-66 | -8.615850e-47 |
Msa0235140 | Msa1192640 | 0.848022 | 7.986363e-60 | -8.615850e-47 |
Msa0365500 | Msa1192640 | 0.896219 | 4.551110e-76 | -8.615850e-47 |
Msa0366420 | Msa1192640 | 0.810894 | 9.185596e-51 | -8.615850e-47 |
Msa0366430 | Msa1192640 | 0.817644 | 2.963755e-52 | -8.615850e-47 |
Msa0366580 | Msa1192640 | 0.819653 | 1.037338e-52 | -8.615850e-47 |
Msa0371730 | Msa1192640 | 0.800871 | 1.175878e-48 | -8.615850e-47 |
Msa0378360 | Msa1192640 | 0.808982 | 2.369610e-50 | -8.615850e-47 |
Msa0384800 | Msa1192640 | 0.890221 | 1.198312e-73 | -8.615850e-47 |
Msa0384890 | Msa1192640 | 0.818081 | 2.361025e-52 | -8.615850e-47 |
Msa0394970 | Msa1192640 | 0.832502 | 9.115630e-56 | -8.615850e-47 |
Msa0406120 | Msa1192640 | 0.877997 | 4.010238e-69 | -8.615850e-47 |
Msa0406280 | Msa1192640 | 0.829248 | 5.725760e-55 | -8.615850e-47 |
Msa0407750 | Msa1192640 | 0.831550 | 1.566136e-55 | -8.615850e-47 |
Msa0414410 | Msa1192640 | 0.900116 | 1.010890e-77 | -8.615850e-47 |
Msa0414420 | Msa1192640 | 0.940560 | 1.892582e-100 | -8.615850e-47 |
Msa0423020 | Msa1192640 | 0.842782 | 2.095039e-58 | -8.615850e-47 |
Msa0427710 | Msa1192640 | 0.806535 | 7.847441e-50 | -8.615850e-47 |
Msa0428000 | Msa1192640 | 0.801568 | 8.469135e-49 | -8.615850e-47 |
Msa0429880 | Msa1192640 | 0.823484 | 1.351076e-53 | -8.615850e-47 |
Msa0435230 | Msa1192640 | 0.818325 | 2.078763e-52 | -8.615850e-47 |
Msa0436780 | Msa1192640 | 0.870992 | 9.591770e-67 | -8.615850e-47 |
Msa0436800 | Msa1192640 | 0.842519 | 2.461238e-58 | -8.615850e-47 |
Msa0438620 | Msa1192640 | 0.897110 | 1.930703e-76 | -8.615850e-47 |
Msa0444130 | Msa1192640 | 0.819376 | 1.200078e-52 | -8.615850e-47 |
Msa0445780 | Msa1192640 | 0.807171 | 5.757130e-50 | -8.615850e-47 |
Msa0450000 | Msa1192640 | 0.882554 | 9.447850e-71 | -8.615850e-47 |
Msa0450570 | Msa1192640 | 0.872754 | 2.493800e-67 | -8.615850e-47 |
Msa0451730 | Msa1192640 | 0.870889 | 1.037211e-66 | -8.615850e-47 |
Msa0452900 | Msa1192640 | 0.945584 | 2.324083e-104 | -8.615850e-47 |
Msa0452910 | Msa1192640 | 0.815763 | 7.824265e-52 | -8.615850e-47 |
Msa0453120 | Msa1192640 | 0.879202 | 1.510318e-69 | -8.615850e-47 |
Msa0454370 | Msa1192640 | 0.835860 | 1.312450e-56 | -8.615850e-47 |
Msa0454910 | Msa1192640 | 0.862386 | 5.259225e-64 | -8.615850e-47 |
Msa0459160 | Msa1192640 | 0.865010 | 8.051842e-65 | -8.615850e-47 |
Msa0459170 | Msa1192640 | 0.862570 | 4.616535e-64 | -8.615850e-47 |
Msa0479340 | Msa1192640 | 0.802079 | 6.650325e-49 | -8.615850e-47 |
Msa0482620 | Msa1192640 | 0.805058 | 1.603674e-49 | -8.615850e-47 |
Msa0979850 | Msa1192640 | 0.836603 | 8.496847e-57 | -8.615850e-47 |
Msa0981270 | Msa1192640 | 0.833626 | 4.787770e-56 | -8.615850e-47 |
Msa0981370 | Msa1192640 | 0.875027 | 4.258409e-68 | -8.615850e-47 |
Msa0986400 | Msa1192640 | 0.822583 | 2.192042e-53 | -8.615850e-47 |
Msa0989060 | Msa1192640 | 0.880764 | 4.193660e-70 | -8.615850e-47 |
Msa0995760 | Msa1192640 | 0.803991 | 2.676689e-49 | -8.615850e-47 |
Msa1016280 | Msa1192640 | 0.919074 | 7.084439e-87 | -8.615850e-47 |
Msa1023010 | Msa1192640 | 0.807942 | 3.950247e-50 | -8.615850e-47 |
Msa1023050 | Msa1192640 | 0.857755 | 1.314519e-62 | -8.615850e-47 |
Msa1024240 | Msa1192640 | 0.842437 | 2.586750e-58 | -8.615850e-47 |
Msa1025360 | Msa1192640 | 0.936276 | 2.249689e-97 | -8.615850e-47 |
Msa1025370 | Msa1192640 | 0.917310 | 6.203914e-86 | -8.615850e-47 |
Msa1030060 | Msa1192640 | 0.813848 | 2.079513e-51 | -8.615850e-47 |
Msa1037200 | Msa1192640 | 0.826746 | 2.290932e-54 | -8.615850e-47 |
Msa1044830 | Msa1192640 | 0.923225 | 3.515025e-89 | -8.615850e-47 |
Msa1044840 | Msa1192640 | 0.937081 | 6.175848e-98 | -8.615850e-47 |
Msa1047800 | Msa1192640 | 0.827405 | 1.593295e-54 | -8.615850e-47 |
Msa1060840 | Msa1192640 | 0.860949 | 1.445472e-63 | -8.615850e-47 |
Msa1062810 | Msa1192640 | 0.811238 | 7.734967e-51 | -8.615850e-47 |
Msa1077460 | Msa1192640 | 0.839712 | 1.344531e-57 | -8.615850e-47 |
Msa1087490 | Msa1192640 | 0.816209 | 6.222425e-52 | -8.615850e-47 |
Msa1091900 | Msa1192640 | 0.821706 | 3.501720e-53 | -8.615850e-47 |
Msa1092990 | Msa1192640 | 0.899572 | 1.735845e-77 | -8.615850e-47 |
Msa1096580 | Msa1192640 | 0.836705 | 7.999166e-57 | -8.615850e-47 |
Msa1099970 | Msa1192640 | 0.802788 | 4.749844e-49 | -8.615850e-47 |
Msa1100980 | Msa1192640 | 0.933364 | 2.099865e-95 | -8.615850e-47 |
Msa0247260 | Msa1192640 | 0.837303 | 5.628501e-57 | -8.615850e-47 |
Msa0267000 | Msa1192640 | 0.917445 | 5.265048e-86 | -8.615850e-47 |
Msa0267010 | Msa1192640 | 0.931628 | 2.849359e-94 | -8.615850e-47 |
Msa0270520 | Msa1192640 | 0.867532 | 1.276545e-65 | -8.615850e-47 |
Msa0282310 | Msa1192640 | 0.822578 | 2.197743e-53 | -8.615850e-47 |
Msa0285810 | Msa1192640 | 0.832369 | 9.834687e-56 | -8.615850e-47 |
Msa0290870 | Msa1192640 | 0.800800 | 1.215920e-48 | -8.615850e-47 |
Msa0304170 | Msa1192640 | 0.858749 | 6.651175e-63 | -8.615850e-47 |
Msa0306460 | Msa1192640 | 0.849426 | 3.257581e-60 | -8.615850e-47 |
Msa0309020 | Msa1192640 | 0.823535 | 1.314304e-53 | -8.615850e-47 |
Msa0313760 | Msa1192640 | 0.858526 | 7.756175e-63 | -8.615850e-47 |
Msa0337900 | Msa1192640 | 0.815955 | 7.090770e-52 | -8.615850e-47 |
Msa0342240 | Msa1192640 | 0.922929 | 5.183703e-89 | -8.615850e-47 |
Msa0360510 | Msa1192640 | 0.909810 | 3.771500e-82 | -8.615850e-47 |
Msa0362420 | Msa1192640 | 0.828629 | 8.083843e-55 | -8.615850e-47 |
Msa0363300 | Msa1192640 | 0.842814 | 2.055134e-58 | -8.615850e-47 |
Msa1109440 | Msa1192640 | 0.918814 | 9.790740e-87 | -8.615850e-47 |
Msa1117150 | Msa1192640 | 0.805619 | 1.222848e-49 | -8.615850e-47 |
Msa1121200 | Msa1192640 | 0.893324 | 6.988287e-75 | -8.615850e-47 |
Msa1135220 | Msa1192640 | 0.836279 | 1.026893e-56 | -8.615850e-47 |
Msa1135740 | Msa1192640 | 0.913731 | 4.377504e-84 | -8.615850e-47 |
Msa1136090 | Msa1192640 | 0.859751 | 3.330830e-63 | -8.615850e-47 |
Msa1146110 | Msa1192640 | 0.905515 | 3.955993e-80 | -8.615850e-47 |
Msa1149360 | Msa1192640 | 0.860774 | 1.633348e-63 | -8.615850e-47 |
Msa1150370 | Msa1192640 | 0.867294 | 1.522181e-65 | -8.615850e-47 |
Msa1160670 | Msa1192640 | 0.818327 | 2.076621e-52 | -8.615850e-47 |
Msa1164120 | Msa1192640 | 0.835940 | 1.252244e-56 | -8.615850e-47 |
Msa1173920 | Msa1192640 | 0.878991 | 1.793784e-69 | -8.615850e-47 |
Msa1178340 | Msa1192640 | 0.807404 | 5.138063e-50 | -8.615850e-47 |
Msa1182090 | Msa1192640 | 0.803126 | 4.045700e-49 | -8.615850e-47 |
Msa1184420 | Msa1192640 | 0.825111 | 5.601544e-54 | -8.615850e-47 |
Msa1187940 | Msa1192640 | 0.910782 | 1.273666e-82 | -8.615850e-47 |
Msa1187950 | Msa1192640 | 0.897041 | 2.063750e-76 | -8.615850e-47 |
Msa1192640 | Msa1193730 | 0.847929 | 8.470121e-60 | -8.615850e-47 |
Msa1192640 | Msa1230430 | 0.807870 | 4.092498e-50 | -8.615850e-47 |
Msa1192640 | Msa1246880 | 0.851344 | 9.437897e-61 | -8.615850e-47 |
Msa1192640 | Msa1248300 | 0.803550 | 3.304609e-49 | -8.615850e-47 |
Msa1192640 | Msa1248310 | 0.818823 | 1.603346e-52 | -8.615850e-47 |
Msa1192640 | Msa1251910 | 0.801291 | 9.649148e-49 | -8.615850e-47 |
Msa1192640 | Msa1260100 | 0.845216 | 4.664962e-59 | -8.615850e-47 |
Msa1192640 | Msa1269670 | 0.914353 | 2.117324e-84 | -8.615850e-47 |
Msa1192640 | Msa1270230 | 0.923074 | 4.286983e-89 | -8.615850e-47 |
Msa1192640 | Msa1270240 | 0.903457 | 3.402232e-79 | -8.615850e-47 |
Msa1192640 | Msa1270270 | 0.896932 | 2.292509e-76 | -8.615850e-47 |
Msa1192640 | Msa1273230 | 0.820264 | 7.519513e-53 | -8.615850e-47 |
Msa1192640 | Msa1283330 | 0.914238 | 2.424377e-84 | -8.615850e-47 |
Msa1192640 | Msa1285930 | 0.976370 | 1.070806e-141 | -8.615850e-47 |
Msa1192640 | Msa1287800 | 0.946193 | 7.359126e-105 | -8.615850e-47 |
Msa1192640 | Msa1287810 | 0.954187 | 5.201141e-112 | -8.615850e-47 |
Msa1192640 | Msa1287820 | 0.870186 | 1.765231e-66 | -8.615850e-47 |
Msa1192640 | Msa1287830 | 0.896834 | 2.521880e-76 | -8.615850e-47 |
Msa1192640 | Msa1288560 | 0.802127 | 6.501440e-49 | -8.615850e-47 |
Msa1192640 | Msa1289420 | 0.832667 | 8.293120e-56 | -8.615850e-47 |
Msa1192640 | Msa1289430 | 0.873855 | 1.063439e-67 | -8.615850e-47 |
Msa1192640 | Msa1297210 | 0.854539 | 1.150624e-61 | -8.615850e-47 |
Msa1192640 | Msa1305480 | 0.865139 | 7.331112e-65 | -8.615850e-47 |
Msa1192640 | Msa1307890 | 0.876730 | 1.107151e-68 | -8.615850e-47 |
Msa1192640 | Msa1310120 | 0.868218 | 7.689143e-66 | -8.615850e-47 |
Msa1192640 | Msa1313980 | 0.808587 | 2.877873e-50 | -8.615850e-47 |
Msa1192640 | Msa1314280 | 0.823718 | 1.191445e-53 | -8.615850e-47 |
Msa1192640 | Msa1320300 | 0.874664 | 5.657692e-68 | -8.615850e-47 |
Msa1192640 | Msa1321560 | 0.804354 | 2.248652e-49 | -8.615850e-47 |
Msa1192640 | Msa1340590 | 0.870795 | 1.113690e-66 | -8.615850e-47 |
Msa1192640 | Msa1342200 | 0.868686 | 5.431079e-66 | -8.615850e-47 |
Msa1192640 | Msa1344520 | 0.826856 | 2.156349e-54 | -8.615850e-47 |
Msa1192640 | Msa1369430 | 0.845450 | 4.031299e-59 | -8.615850e-47 |
Msa1192640 | Msa1370210 | 0.815035 | 1.136054e-51 | -8.615850e-47 |
Msa1192640 | Msa1382690 | 0.840890 | 6.619466e-58 | -8.615850e-47 |
Msa1192640 | Msa1382700 | 0.848073 | 7.730802e-60 | -8.615850e-47 |
Msa1192640 | Msa1386330 | 0.822458 | 2.344098e-53 | -8.615850e-47 |
Msa1192640 | Msa1397150 | 0.830774 | 2.430517e-55 | -8.615850e-47 |
Msa1192640 | Msa1397580 | 0.868887 | 4.673723e-66 | -8.615850e-47 |
Msa1192640 | Msa1402790 | 0.829091 | 6.248830e-55 | -8.615850e-47 |
Msa1192640 | Msa1404000 | 0.908752 | 1.212166e-81 | -8.615850e-47 |
Msa1192640 | Msa1408780 | 0.876395 | 1.444538e-68 | -8.615850e-47 |
Msa1192640 | Msa1415310 | 0.894883 | 1.621825e-75 | -8.615850e-47 |
Msa1192640 | Msa1422180 | 0.878761 | 2.160992e-69 | -8.615850e-47 |
Msa1192640 | Msa1433120 | 0.898271 | 6.246990e-77 | -8.615850e-47 |
Msa1192640 | Msa1451190 | 0.817009 | 4.117104e-52 | -8.615850e-47 |
Msa1192640 | Msa1451570 | 0.839583 | 1.452460e-57 | -8.615850e-47 |
Msa0485030 | Msa1192640 | 0.849078 | 4.072524e-60 | -8.615850e-47 |
Msa0491590 | Msa1192640 | 0.878040 | 3.874303e-69 | -8.615850e-47 |
Msa0502760 | Msa1192640 | 0.844122 | 9.194480e-59 | -8.615850e-47 |
Msa0505080 | Msa1192640 | 0.814074 | 1.854034e-51 | -8.615850e-47 |
Msa0506190 | Msa1192640 | 0.810347 | 1.205966e-50 | -8.615850e-47 |
Msa0506270 | Msa1192640 | 0.846600 | 1.961221e-59 | -8.615850e-47 |
Msa0518540 | Msa1192640 | 0.815117 | 1.089242e-51 | -8.615850e-47 |
Msa0534540 | Msa1192640 | 0.835974 | 1.227897e-56 | -8.615850e-47 |
Msa0564890 | Msa1192640 | 0.920979 | 6.438701e-88 | -8.615850e-47 |
Msa0589780 | Msa1192640 | 0.811936 | 5.454384e-51 | -8.615850e-47 |
Msa0596150 | Msa1192640 | 0.853563 | 2.199494e-61 | -8.615850e-47 |
Msa0598780 | Msa1192640 | 0.800651 | 1.303958e-48 | -8.615850e-47 |
Msa0600700 | Msa1192640 | 0.806720 | 7.171203e-50 | -8.615850e-47 |
Msa0845930 | Msa1192640 | 0.805727 | 1.161103e-49 | -8.615850e-47 |
Msa0846210 | Msa1192640 | 0.870236 | 1.699156e-66 | -8.615850e-47 |
Msa0846330 | Msa1192640 | 0.875811 | 2.296274e-68 | -8.615850e-47 |
Msa0846350 | Msa1192640 | 0.877717 | 5.023337e-69 | -8.615850e-47 |
Msa0848960 | Msa1192640 | 0.857897 | 1.192926e-62 | -8.615850e-47 |
Msa0854980 | Msa1192640 | 0.823796 | 1.142205e-53 | -8.615850e-47 |
Msa0858980 | Msa1192640 | 0.856607 | 2.869515e-62 | -8.615850e-47 |
Msa0865320 | Msa1192640 | 0.907828 | 3.323278e-81 | -8.615850e-47 |
Msa0866810 | Msa1192640 | 0.810290 | 1.240495e-50 | -8.615850e-47 |
Msa0872230 | Msa1192640 | 0.854819 | 9.545844e-62 | -8.615850e-47 |
Msa0873460 | Msa1192640 | 0.819788 | 9.663204e-53 | -8.615850e-47 |
Msa0884150 | Msa1192640 | 0.803168 | 3.965178e-49 | -8.615850e-47 |
Msa0885280 | Msa1192640 | 0.830548 | 2.760407e-55 | -8.615850e-47 |
Msa0885290 | Msa1192640 | 0.883638 | 3.788588e-71 | -8.615850e-47 |
Msa0887920 | Msa1192640 | 0.834598 | 2.731748e-56 | -8.615850e-47 |
Msa0888370 | Msa1192640 | 0.863049 | 3.284834e-64 | -8.615850e-47 |
Msa0888420 | Msa1192640 | 0.844834 | 5.913213e-59 | -8.615850e-47 |
Msa0895270 | Msa1192640 | 0.805379 | 1.373678e-49 | -8.615850e-47 |
Msa0896080 | Msa1192640 | 0.849500 | 3.106825e-60 | -8.615850e-47 |
Msa0907260 | Msa1192640 | 0.836605 | 8.486557e-57 | -8.615850e-47 |
Msa0914280 | Msa1192640 | 0.803119 | 4.058503e-49 | -8.615850e-47 |
Msa0914760 | Msa1192640 | 0.825655 | 4.163579e-54 | -8.615850e-47 |
Msa0922150 | Msa1192640 | 0.811911 | 5.523774e-51 | -8.615850e-47 |
Msa0952190 | Msa1192640 | 0.842925 | 1.919712e-58 | -8.615850e-47 |
Msa0952350 | Msa1192640 | 0.814657 | 1.377618e-51 | -8.615850e-47 |
Msa0952720 | Msa1192640 | 0.845074 | 5.093985e-59 | -8.615850e-47 |
Msa0954910 | Msa1192640 | 0.827748 | 1.318167e-54 | -8.615850e-47 |
Msa0956270 | Msa1192640 | 0.841596 | 4.318583e-58 | -8.615850e-47 |
Msa0956940 | Msa1192640 | 0.802520 | 5.396958e-49 | -8.615850e-47 |
Msa0957680 | Msa1192640 | 0.844751 | 6.226891e-59 | -8.615850e-47 |
Msa0957860 | Msa1192640 | 0.805601 | 1.233949e-49 | -8.615850e-47 |
Msa0957960 | Msa1192640 | 0.805643 | 1.208893e-49 | -8.615850e-47 |
Msa0969260 | Msa1192640 | 0.804327 | 2.278220e-49 | -8.615850e-47 |
Msa0974870 | Msa1192640 | 0.810291 | 1.240228e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192640 | MtrunA17_Chr2g0289121 | 86.228 | 334 | 36 | 2 | 125 | 458 | 285 | 608 | 0.0 | 581 |
Msa1192640 | MtrunA17_Chr2g0289121 | 85.870 | 92 | 13 | 0 | 451 | 542 | 703 | 794 | 3.26e-45 | 170 |
Msa1192640 | MtrunA17_Chr2g0289121 | 68.571 | 140 | 13 | 2 | 1 | 110 | 10 | 148 | 4.28e-43 | 164 |
Msa1192640 | MtrunA17_Chr4g0075261 | 54.188 | 382 | 161 | 6 | 96 | 477 | 270 | 637 | 3.50e-130 | 400 |
Msa1192640 | MtrunA17_Chr4g0075261 | 73.913 | 92 | 24 | 0 | 451 | 542 | 748 | 839 | 2.17e-37 | 147 |
Msa1192640 | MtrunA17_Chr8g0361381 | 86.697 | 218 | 23 | 2 | 245 | 462 | 1 | 212 | 3.05e-126 | 368 |
Msa1192640 | MtrunA17_Chr2g0289031 | 78.534 | 191 | 41 | 0 | 268 | 458 | 2 | 192 | 2.13e-98 | 303 |
Msa1192640 | MtrunA17_Chr2g0289031 | 86.364 | 88 | 12 | 0 | 455 | 542 | 281 | 368 | 2.57e-45 | 164 |
Msa1192640 | MtrunA17_Chr2g0289101 | 86.014 | 143 | 19 | 1 | 120 | 261 | 3 | 145 | 4.05e-83 | 256 |
Msa1192640 | MtrunA17_Chr7g0275771 | 40.107 | 374 | 185 | 7 | 122 | 458 | 265 | 636 | 6.13e-83 | 277 |
Msa1192640 | MtrunA17_Chr7g0275771 | 67.045 | 88 | 29 | 0 | 455 | 542 | 812 | 899 | 5.35e-31 | 128 |
Msa1192640 | MtrunA17_Chr1g0183311 | 42.818 | 362 | 175 | 7 | 125 | 458 | 276 | 633 | 2.46e-81 | 272 |
Msa1192640 | MtrunA17_Chr1g0183311 | 67.742 | 93 | 30 | 0 | 450 | 542 | 762 | 854 | 2.71e-34 | 138 |
Msa1192640 | MtrunA17_Chr1g0211711 | 43.333 | 360 | 172 | 8 | 125 | 458 | 475 | 828 | 5.41e-80 | 271 |
Msa1192640 | MtrunA17_Chr1g0211711 | 68.817 | 93 | 29 | 0 | 450 | 542 | 931 | 1023 | 5.19e-34 | 137 |
Msa1192640 | MtrunA17_Chr1g0147021 | 41.341 | 358 | 158 | 8 | 125 | 458 | 1001 | 1330 | 8.39e-78 | 267 |
Msa1192640 | MtrunA17_Chr1g0147021 | 70.588 | 85 | 25 | 0 | 458 | 542 | 1586 | 1670 | 1.48e-30 | 127 |
Msa1192640 | MtrunA17_Chr1g0211691 | 42.896 | 366 | 178 | 8 | 120 | 458 | 472 | 833 | 1.66e-74 | 254 |
Msa1192640 | MtrunA17_Chr5g0420361 | 42.265 | 362 | 172 | 13 | 125 | 458 | 208 | 560 | 1.16e-73 | 249 |
Msa1192640 | MtrunA17_Chr5g0420361 | 65.591 | 93 | 32 | 0 | 450 | 542 | 678 | 770 | 2.69e-32 | 132 |
Msa1192640 | MtrunA17_Chr1g0211661 | 41.398 | 372 | 183 | 9 | 116 | 458 | 348 | 713 | 1.86e-73 | 250 |
Msa1192640 | MtrunA17_Chr1g0211661 | 71.698 | 53 | 15 | 0 | 458 | 510 | 813 | 865 | 1.09e-16 | 83.6 |
Msa1192640 | MtrunA17_Chr5g0426961 | 41.828 | 361 | 179 | 9 | 125 | 458 | 273 | 629 | 6.48e-70 | 240 |
Msa1192640 | MtrunA17_Chr5g0426961 | 69.892 | 93 | 28 | 0 | 450 | 542 | 715 | 807 | 8.88e-35 | 139 |
Msa1192640 | MtrunA17_Chr6g0472441 | 37.466 | 371 | 178 | 14 | 125 | 462 | 151 | 500 | 8.14e-65 | 224 |
Msa1192640 | MtrunA17_Chr6g0472441 | 62.366 | 93 | 35 | 0 | 450 | 542 | 600 | 692 | 1.70e-30 | 126 |
Msa1192640 | MtrunA17_Chr2g0289091 | 84.821 | 112 | 17 | 0 | 347 | 458 | 20 | 131 | 2.03e-61 | 208 |
Msa1192640 | MtrunA17_Chr2g0289091 | 83.951 | 81 | 13 | 0 | 452 | 532 | 340 | 420 | 2.28e-39 | 148 |
Msa1192640 | MtrunA17_Chr5g0448301 | 38.211 | 369 | 180 | 10 | 116 | 458 | 163 | 509 | 2.66e-60 | 210 |
Msa1192640 | MtrunA17_Chr1g0192011 | 32.853 | 347 | 203 | 4 | 127 | 463 | 395 | 721 | 8.23e-58 | 207 |
Msa1192640 | MtrunA17_Chr1g0192011 | 45.977 | 87 | 47 | 0 | 456 | 542 | 849 | 935 | 2.39e-19 | 92.0 |
Msa1192640 | MtrunA17_Chr2g0289041 | 92.632 | 95 | 7 | 0 | 125 | 219 | 110 | 204 | 1.13e-57 | 191 |
Msa1192640 | MtrunA17_Chr2g0281051 | 30.499 | 341 | 207 | 5 | 125 | 440 | 339 | 674 | 2.17e-36 | 144 |
Msa1192640 | MtrunA17_Chr2g0281051 | 47.727 | 88 | 46 | 0 | 455 | 542 | 842 | 929 | 5.50e-20 | 94.4 |
Msa1192640 | MtrunA17_Chr1g0211701 | 70.787 | 89 | 26 | 0 | 454 | 542 | 2 | 90 | 3.77e-36 | 132 |
Msa1192640 | MtrunA17_Chr4g0048531 | 31.987 | 297 | 178 | 4 | 200 | 477 | 718 | 1009 | 1.29e-35 | 142 |
Msa1192640 | MtrunA17_Chr4g0048531 | 47.525 | 101 | 46 | 2 | 449 | 542 | 1151 | 1251 | 8.52e-21 | 97.1 |
Msa1192640 | MtrunA17_Chr7g0231061 | 42.675 | 157 | 87 | 1 | 334 | 490 | 9 | 162 | 3.58e-32 | 122 |
Msa1192640 | MtrunA17_Chr8g0340381 | 57.609 | 92 | 35 | 2 | 371 | 462 | 36 | 123 | 5.52e-26 | 105 |
Msa1192640 | MtrunA17_Chr8g0361391 | 80.000 | 60 | 11 | 1 | 451 | 510 | 79 | 137 | 1.40e-25 | 103 |
Msa1192640 | MtrunA17_Chr8g0364421 | 31.628 | 215 | 119 | 5 | 125 | 328 | 27 | 224 | 1.05e-21 | 94.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1192640 | AT1G11950.2 | 51.648 | 364 | 163 | 5 | 125 | 477 | 323 | 684 | 7.14e-120 | 372 |
Msa1192640 | AT1G11950.2 | 64.000 | 50 | 18 | 0 | 451 | 500 | 752 | 801 | 2.21e-13 | 73.6 |
Msa1192640 | AT1G11950.1 | 51.648 | 364 | 163 | 5 | 125 | 477 | 323 | 684 | 2.56e-119 | 372 |
Msa1192640 | AT1G11950.1 | 70.652 | 92 | 27 | 0 | 451 | 542 | 752 | 843 | 4.68e-36 | 144 |
Msa1192640 | AT1G11950.3 | 51.648 | 364 | 163 | 5 | 125 | 477 | 323 | 684 | 2.56e-119 | 372 |
Msa1192640 | AT1G11950.3 | 70.652 | 92 | 27 | 0 | 451 | 542 | 752 | 843 | 4.68e-36 | 144 |
Msa1192640 | AT1G62310.1 | 53.179 | 346 | 149 | 4 | 125 | 458 | 339 | 683 | 9.65e-117 | 366 |
Msa1192640 | AT1G62310.1 | 69.565 | 92 | 28 | 0 | 451 | 542 | 778 | 869 | 1.28e-34 | 139 |
Msa1192640 | AT4G00990.2 | 44.693 | 358 | 160 | 8 | 125 | 458 | 210 | 553 | 4.79e-86 | 282 |
Msa1192640 | AT4G00990.2 | 67.925 | 53 | 17 | 0 | 456 | 508 | 718 | 770 | 2.51e-16 | 82.8 |
Msa1192640 | AT4G00990.3 | 44.693 | 358 | 160 | 8 | 125 | 458 | 210 | 553 | 4.87e-86 | 283 |
Msa1192640 | AT4G00990.3 | 59.016 | 61 | 25 | 0 | 456 | 516 | 718 | 778 | 1.33e-16 | 84.0 |
Msa1192640 | AT4G00990.1 | 44.693 | 358 | 160 | 8 | 125 | 458 | 210 | 553 | 9.09e-86 | 283 |
Msa1192640 | AT4G00990.1 | 64.368 | 87 | 31 | 0 | 456 | 542 | 718 | 804 | 8.94e-30 | 124 |
Msa1192640 | AT3G07610.2 | 38.206 | 301 | 153 | 6 | 194 | 473 | 410 | 698 | 4.08e-54 | 196 |
Msa1192640 | AT3G07610.1 | 38.811 | 286 | 145 | 4 | 194 | 458 | 410 | 686 | 2.16e-53 | 195 |
Msa1192640 | AT3G07610.1 | 62.366 | 93 | 35 | 0 | 450 | 542 | 774 | 866 | 1.58e-29 | 124 |
Msa1192640 | AT3G07610.3 | 38.596 | 285 | 145 | 4 | 194 | 457 | 410 | 685 | 8.18e-53 | 194 |
Msa1192640 | AT3G07610.3 | 62.366 | 93 | 35 | 0 | 450 | 542 | 796 | 888 | 1.73e-29 | 124 |
Msa1192640 | AT1G09060.2 | 31.830 | 377 | 226 | 8 | 127 | 494 | 335 | 689 | 1.36e-48 | 181 |
Msa1192640 | AT1G09060.2 | 46.591 | 88 | 46 | 1 | 455 | 542 | 779 | 865 | 1.33e-15 | 80.9 |
Msa1192640 | AT1G09060.1 | 31.830 | 377 | 226 | 8 | 127 | 494 | 335 | 689 | 1.36e-48 | 181 |
Msa1192640 | AT1G09060.1 | 46.591 | 88 | 46 | 1 | 455 | 542 | 779 | 865 | 1.33e-15 | 80.9 |
Msa1192640 | AT1G09060.4 | 31.830 | 377 | 226 | 8 | 127 | 494 | 349 | 703 | 1.42e-48 | 181 |
Msa1192640 | AT1G09060.4 | 46.591 | 88 | 46 | 1 | 455 | 542 | 793 | 879 | 1.41e-15 | 80.5 |
Msa1192640 | AT1G09060.3 | 31.830 | 377 | 226 | 8 | 127 | 494 | 349 | 703 | 1.42e-48 | 181 |
Msa1192640 | AT1G09060.3 | 46.591 | 88 | 46 | 1 | 455 | 542 | 793 | 879 | 1.41e-15 | 80.5 |
Msa1192640 | AT4G21430.1 | 34.536 | 194 | 117 | 2 | 270 | 460 | 490 | 676 | 1.49e-27 | 118 |
Msa1192640 | AT4G21430.1 | 44.048 | 84 | 47 | 0 | 458 | 541 | 803 | 886 | 1.31e-15 | 80.9 |
Find 90 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCACAACCACCTAGTTCTTT+TGG | 0.232816 | 8_1:-38530674 | None:intergenic |
AGATGAGAGGATATCTAAAT+TGG | 0.235004 | 8_1:+38530730 | Msa1192640:CDS |
GCAAAATCTTACATTGCTTA+TGG | 0.238253 | 8_1:+38531500 | Msa1192640:CDS |
CACCGTTCCTCCAATACTTT+TGG | 0.248189 | 8_1:-38530901 | None:intergenic |
AAGAAGCTGGAGGCAGAATT+TGG | 0.254763 | 8_1:+38532126 | Msa1192640:CDS |
CATATTTCAAAGGAACATTT+AGG | 0.255943 | 8_1:-38530452 | None:intergenic |
GATATCTCCAATTGACATAT+TGG | 0.276410 | 8_1:-38529717 | None:intergenic |
TTACTTGAATCAAAAGTTAT+TGG | 0.278374 | 8_1:-38530584 | None:intergenic |
ATATCTCCAATTGACATATT+GGG | 0.312488 | 8_1:-38529716 | None:intergenic |
TCCCTTGCTCAGTGATTCTT+AGG | 0.341410 | 8_1:-38533797 | None:intergenic |
AGTACCATACTTCTTTGATT+TGG | 0.343751 | 8_1:-38529224 | None:intergenic |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 8_1:-38530633 | None:intergenic |
ATTTAGGACAGCTTCTATAA+AGG | 0.376068 | 8_1:-38530436 | None:intergenic |
AGGAAAGTTGGATAATATAA+TGG | 0.394716 | 8_1:+38529348 | Msa1192640:CDS |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 8_1:+38531266 | Msa1192640:CDS |
TCCTCCGCCAAGCTCTTCTA+TGG | 0.397587 | 8_1:-38531525 | None:intergenic |
TGTACAGGCTATTGATTGCT+TGG | 0.402033 | 8_1:+38531045 | Msa1192640:CDS |
ATTACCAAATCAAAGAAGTA+TGG | 0.403227 | 8_1:+38529220 | Msa1192640:CDS |
ATTGCAATTCTTACGGCAAA+AGG | 0.411110 | 8_1:-38529753 | None:intergenic |
TCACCTTCAGATTTCTAACT+TGG | 0.413712 | 8_1:-38532294 | None:intergenic |
GTTGGGAGCCAATGGTTACT+TGG | 0.420214 | 8_1:+38530969 | Msa1192640:CDS |
CTTTATAACCTTCAAAGAAC+TGG | 0.427941 | 8_1:-38531274 | None:intergenic |
ATGTTGAGTTATTTACCAAA+TGG | 0.440113 | 8_1:+38530618 | Msa1192640:CDS |
TACAAAACTCCATTGTGATA+TGG | 0.447629 | 8_1:+38531556 | Msa1192640:CDS |
GAGTATTGCGATCCTCGATC+TGG | 0.448811 | 8_1:+38531422 | Msa1192640:CDS |
TATTTAAATTCCAAAAGTAT+TGG | 0.454019 | 8_1:+38530891 | Msa1192640:CDS |
GTCAAGAAGCAAAGGAAAGT+TGG | 0.457233 | 8_1:+38529336 | Msa1192640:CDS |
AATTTAGATATCCTCTCATC+TGG | 0.457820 | 8_1:-38530728 | None:intergenic |
GTATTTCTTTGCAACAACTA+AGG | 0.462093 | 8_1:-38530475 | None:intergenic |
AGAACATCAGACATTAGAAC+GGG | 0.468607 | 8_1:-38530926 | None:intergenic |
AGGTACCCCAATATGTCAAT+TGG | 0.473897 | 8_1:+38529710 | Msa1192640:intron |
GGATCGCAATACTCTTGAAA+TGG | 0.475406 | 8_1:-38531413 | None:intergenic |
TTGCAATTCTTACGGCAAAA+GGG | 0.477440 | 8_1:-38529752 | None:intergenic |
AGTTTCTGCTCAAAAGTCAT+AGG | 0.478852 | 8_1:-38532235 | None:intergenic |
TTAAATTCCAAAAGTATTGG+AGG | 0.481537 | 8_1:+38530894 | Msa1192640:CDS |
AAAAGGGACAGGACTGAGTT+GGG | 0.489266 | 8_1:+38530952 | Msa1192640:CDS |
GATGAGAGGATATCTAAATT+GGG | 0.493940 | 8_1:+38530731 | Msa1192640:CDS |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 8_1:+38531277 | Msa1192640:CDS |
AAATGATAACTCAAATGTAC+AGG | 0.505646 | 8_1:+38531030 | Msa1192640:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.521004 | 8_1:+38531278 | Msa1192640:CDS |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.522574 | 8_1:+38530688 | Msa1192640:CDS |
GAATCAAAAGTTATTGGTAG+AGG | 0.524056 | 8_1:-38530578 | None:intergenic |
ACCATAGAAGAGCTTGGCGG+AGG | 0.528180 | 8_1:+38531524 | Msa1192640:CDS |
TTGCTCAGTGATTCTTAGGA+AGG | 0.546083 | 8_1:-38533793 | None:intergenic |
TTCCAAAAGTATTGGAGGAA+CGG | 0.547245 | 8_1:+38530899 | Msa1192640:CDS |
AAGATTAAAATTTATAAACA+AGG | 0.547287 | 8_1:+38529052 | Msa1192640:CDS |
TGCAATTCTTACGGCAAAAG+GGG | 0.547428 | 8_1:-38529751 | None:intergenic |
TTCAGATTTCTAACTTGGTG+AGG | 0.548770 | 8_1:-38532289 | None:intergenic |
GAGCTTGGCGGAGGAGATTG+TGG | 0.549683 | 8_1:+38531533 | Msa1192640:CDS |
AGGACTGAGTTGGGAGCCAA+TGG | 0.550332 | 8_1:+38530961 | Msa1192640:CDS |
CATGTCATAAAGCCTGACTT+AGG | 0.552096 | 8_1:+38531476 | Msa1192640:CDS |
TCAGATTTCTAACTTGGTGA+GGG | 0.555680 | 8_1:-38532288 | None:intergenic |
ACTTGGTGAGGGCATCCAGC+AGG | 0.556782 | 8_1:-38532277 | None:intergenic |
CTTCGTGTCACCAGAAAATG+TGG | 0.557709 | 8_1:+38533736 | Msa1192640:CDS |
GCAGAATCTCTTGAGCATGT+TGG | 0.557772 | 8_1:-38529154 | None:intergenic |
CCAAAAGAACTAGGTGGTTG+TGG | 0.561255 | 8_1:+38530674 | Msa1192640:CDS |
ACAACTAAGGCATATTTCAA+AGG | 0.561651 | 8_1:-38530462 | None:intergenic |
TTTGATTCAAGTAATTTAGA+GGG | 0.561858 | 8_1:+38530593 | Msa1192640:CDS |
TGATTGCTTGGTTAGTTGTG+AGG | 0.575353 | 8_1:+38531057 | Msa1192640:CDS |
AATGCTCTCCAAGTAACCAT+TGG | 0.575828 | 8_1:-38530977 | None:intergenic |
ATGACAAAGTCAAGAAGCAA+AGG | 0.583092 | 8_1:+38529328 | Msa1192640:CDS |
TATGGAACCATAGAAGAGCT+TGG | 0.585851 | 8_1:+38531518 | Msa1192640:CDS |
AGATGCTCAAGCTAAAAGAC+TGG | 0.588373 | 8_1:+38531327 | Msa1192640:CDS |
AAATGGAATGTGAATAGTGA+TGG | 0.595578 | 8_1:+38530635 | Msa1192640:CDS |
GTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 8_1:-38531454 | None:intergenic |
GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 8_1:+38532262 | Msa1192640:CDS |
TAGAACATCAGACATTAGAA+CGG | 0.608338 | 8_1:-38530927 | None:intergenic |
CCATTGTGATATGGCAGACA+CGG | 0.611708 | 8_1:+38531565 | Msa1192640:CDS |
TATCTCCAATTGACATATTG+GGG | 0.611778 | 8_1:-38529715 | None:intergenic |
TCACCAAGTTAGAAATCTGA+AGG | 0.615043 | 8_1:+38532291 | Msa1192640:CDS |
TCTATAAGGTCACTTGACAT+CGG | 0.616684 | 8_1:-38530860 | None:intergenic |
TCAGGCTTTATGACATGTGG+TGG | 0.618540 | 8_1:-38531470 | None:intergenic |
AACGCATTCTTCCAGATGAG+AGG | 0.624265 | 8_1:+38530717 | Msa1192640:CDS |
TAAGGTCACTTGACATCGGA+CGG | 0.624973 | 8_1:-38530856 | None:intergenic |
AATGAATAAACTCGTCACAA+TGG | 0.631350 | 8_1:-38531385 | None:intergenic |
GAATGTGCTCCAAAAGAACT+AGG | 0.632610 | 8_1:+38530665 | Msa1192640:CDS |
AGGTTTAGAATTCCAGATCG+AGG | 0.639738 | 8_1:-38531434 | None:intergenic |
AAGTCAGGCTTTATGACATG+TGG | 0.640339 | 8_1:-38531473 | None:intergenic |
TGAGTATAAGAAGAAGCTGG+AGG | 0.641321 | 8_1:+38532116 | Msa1192640:CDS |
GGAACCATAGAAGAGCTTGG+CGG | 0.645788 | 8_1:+38531521 | Msa1192640:CDS |
TGAAACTTAATTTCAAACCG+CGG | 0.672722 | 8_1:-38530515 | None:intergenic |
CCGTGTCTGCCATATCACAA+TGG | 0.685598 | 8_1:-38531565 | None:intergenic |
TGTTGCAAAGAAATACGCAA+CGG | 0.692822 | 8_1:+38530482 | Msa1192640:CDS |
AAAGAACTAGGTGGTTGTGG+TGG | 0.707130 | 8_1:+38530677 | Msa1192640:CDS |
AGAGGTGATGAATACATGCA+TGG | 0.707440 | 8_1:+38530548 | Msa1192640:CDS |
ATAAACTCGTCACAATGGCG+CGG | 0.716047 | 8_1:-38531380 | None:intergenic |
CAATTGGAGATATCGCAGAG+AGG | 0.732707 | 8_1:+38529726 | Msa1192640:CDS |
TGTGCTCCAAAAGAACTAGG+TGG | 0.792037 | 8_1:+38530668 | Msa1192640:CDS |
GGTGATGAATACATGCATGG+TGG | 0.798300 | 8_1:+38530551 | Msa1192640:CDS |
GCAACGGAAGTATCACACCG+CGG | 0.852489 | 8_1:+38530498 | Msa1192640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATTAAAATTTATAAACA+AGG | + | chr8_1:38529052-38529071 | Msa1192640:CDS | 10.0% |
!! | AATAAAATTATATTACTAAG+TGG | - | chr8_1:38529881-38529900 | None:intergenic | 10.0% |
!! | ATATTATATTAGATTTGAAA+AGG | + | chr8_1:38533031-38533050 | Msa1192640:intron | 10.0% |
!!! | TAAATTAAAGATTTGAAATT+GGG | - | chr8_1:38533430-38533449 | None:intergenic | 10.0% |
!!! | ATAAATTAAAGATTTGAAAT+TGG | - | chr8_1:38533431-38533450 | None:intergenic | 10.0% |
!!! | TTTTTTTATTTTTTGCACAT+AGG | + | chr8_1:38529690-38529709 | Msa1192640:intron | 15.0% |
!! | GTAGTAAATTAATCATATAT+CGG | - | chr8_1:38529959-38529978 | None:intergenic | 15.0% |
!!! | TCTTTTGTATTTTGTTTTTT+TGG | + | chr8_1:38530381-38530400 | Msa1192640:intron | 15.0% |
!!! | TAAATAGCTTTTTTTCTATA+AGG | - | chr8_1:38530877-38530896 | None:intergenic | 15.0% |
!!! | TATTTAAATTCCAAAAGTAT+TGG | + | chr8_1:38530891-38530910 | Msa1192640:CDS | 15.0% |
!! | TATATAGAGAGATAAATATT+TGG | - | chr8_1:38531226-38531245 | None:intergenic | 15.0% |
!! | GAAAAAGATATATAAATTTC+TGG | + | chr8_1:38531300-38531319 | Msa1192640:CDS | 15.0% |
!! | AATCTTAGTCTAAAAAAATT+AGG | + | chr8_1:38532503-38532522 | Msa1192640:intron | 15.0% |
!! | TTGTATTTATATCATTATCT+TGG | + | chr8_1:38532923-38532942 | Msa1192640:intron | 15.0% |
!! | TGTATTTATATCATTATCTT+GGG | + | chr8_1:38532924-38532943 | Msa1192640:intron | 15.0% |
!! | CATATTCCTAAAAAAAATTA+TGG | - | chr8_1:38533235-38533254 | None:intergenic | 15.0% |
!! | AATTAATAATTGTAACTCTA+TGG | - | chr8_1:38533355-38533374 | None:intergenic | 15.0% |
!!! | TTCTTTTATGACAACTATTT+AGG | + | chr8_1:38529398-38529417 | Msa1192640:intron | 20.0% |
!! | ACTTTGTGTTAAATAATAAC+AGG | + | chr8_1:38529463-38529482 | Msa1192640:intron | 20.0% |
!!! | GTTTAAGATGTATTAAACAT+TGG | + | chr8_1:38529576-38529595 | Msa1192640:intron | 20.0% |
!!! | TCAAAAATTTGTTTAAGAGA+TGG | - | chr8_1:38529984-38530003 | None:intergenic | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr8_1:38530530-38530549 | Msa1192640:CDS | 20.0% |
!! | TTACTTGAATCAAAAGTTAT+TGG | - | chr8_1:38530587-38530606 | None:intergenic | 20.0% |
!!! | TTTTGATTCAAGTAATTTAG+AGG | + | chr8_1:38530592-38530611 | Msa1192640:CDS | 20.0% |
!! | TTTGATTCAAGTAATTTAGA+GGG | + | chr8_1:38530593-38530612 | Msa1192640:CDS | 20.0% |
!! | TTTCATAGTTAAATTTCCTT+TGG | + | chr8_1:38531085-38531104 | Msa1192640:intron | 20.0% |
!! | CTAAAATATTAAGAACGAAT+TGG | - | chr8_1:38531155-38531174 | None:intergenic | 20.0% |
!!! | TATTGTTCAATAATTTTGAC+AGG | + | chr8_1:38531663-38531682 | Msa1192640:intron | 20.0% |
!!! | AAAAATAAAAAGAGCACATA+AGG | + | chr8_1:38531747-38531766 | Msa1192640:intron | 20.0% |
!! | AAAAACATTCCAAAGAATTT+AGG | + | chr8_1:38531942-38531961 | Msa1192640:intron | 20.0% |
!!! | TAATATAATACCTCTTTTAC+TGG | - | chr8_1:38531983-38532002 | None:intergenic | 20.0% |
!! | CAAAAGTCAAATAAAAACAT+TGG | - | chr8_1:38532098-38532117 | None:intergenic | 20.0% |
!! | CTAGAATATTAATCAATTAC+AGG | + | chr8_1:38532205-38532224 | Msa1192640:intron | 20.0% |
!!! | GATATGCCATAATTTTTTTT+AGG | + | chr8_1:38533226-38533245 | Msa1192640:intron | 20.0% |
!!! | AGCAATATCTTATTTTTTTG+TGG | + | chr8_1:38533297-38533316 | Msa1192640:intron | 20.0% |
!! | TATCCTTATTAATATAGTGT+GGG | - | chr8_1:38533458-38533477 | None:intergenic | 20.0% |
!! | ACCAAAATGACTTATAATTT+AGG | + | chr8_1:38533549-38533568 | Msa1192640:intron | 20.0% |
!! | CCAAAATGACTTATAATTTA+GGG | + | chr8_1:38533550-38533569 | Msa1192640:intron | 20.0% |
!! | CAAAATGACTTATAATTTAG+GGG | + | chr8_1:38533551-38533570 | Msa1192640:intron | 20.0% |
!! | AAACTTAAATTTAAGTCAAG+AGG | - | chr8_1:38533614-38533633 | None:intergenic | 20.0% |
!! | ATCAACAATCTGAGTTTTTA+AGG | + | chr8_1:38529083-38529102 | Msa1192640:CDS | 25.0% |
! | GTTGAAAAATGTTGTAAACT+TGG | + | chr8_1:38529196-38529215 | Msa1192640:CDS | 25.0% |
! | ATTACCAAATCAAAGAAGTA+TGG | + | chr8_1:38529220-38529239 | Msa1192640:CDS | 25.0% |
! | AGGAAAGTTGGATAATATAA+TGG | + | chr8_1:38529348-38529367 | Msa1192640:CDS | 25.0% |
! | AGTTGCATTTAATTAAGCTA+TGG | - | chr8_1:38529446-38529465 | None:intergenic | 25.0% |
!!! | ACATGTTTTGATATGTTGTT+TGG | - | chr8_1:38529492-38529511 | None:intergenic | 25.0% |
! | TTTGTACAATGTACAAATTG+TGG | - | chr8_1:38529539-38529558 | None:intergenic | 25.0% |
! | TATTAACAAATATGTGACCT+TGG | - | chr8_1:38529629-38529648 | None:intergenic | 25.0% |
! | ATATCTCCAATTGACATATT+GGG | - | chr8_1:38529719-38529738 | None:intergenic | 25.0% |
! | CATTACAGAAACGAATTTAA+GGG | - | chr8_1:38529840-38529859 | None:intergenic | 25.0% |
! | TCATTACAGAAACGAATTTA+AGG | - | chr8_1:38529841-38529860 | None:intergenic | 25.0% |
!! | TGAAGTTATACCATGTATTT+TGG | - | chr8_1:38530036-38530055 | None:intergenic | 25.0% |
! | CATATTTCAAAGGAACATTT+AGG | - | chr8_1:38530455-38530474 | None:intergenic | 25.0% |
! | ATGTTGAGTTATTTACCAAA+TGG | + | chr8_1:38530618-38530637 | Msa1192640:CDS | 25.0% |
!!! | TTAAATTCCAAAAGTATTGG+AGG | + | chr8_1:38530894-38530913 | Msa1192640:CDS | 25.0% |
!!! | ATGTCTGATGTTCTAAAAAA+AGG | + | chr8_1:38530935-38530954 | Msa1192640:CDS | 25.0% |
!!! | TGTCTGATGTTCTAAAAAAA+GGG | + | chr8_1:38530936-38530955 | Msa1192640:CDS | 25.0% |
! | AAATGATAACTCAAATGTAC+AGG | + | chr8_1:38531030-38531049 | Msa1192640:CDS | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | + | chr8_1:38531278-38531297 | Msa1192640:CDS | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | - | chr8_1:38531356-38531375 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTG+AGG | + | chr8_1:38531690-38531709 | Msa1192640:intron | 25.0% |
!!! | AAGGGTCTTGTTAAATATAA+TGG | + | chr8_1:38531784-38531803 | Msa1192640:intron | 25.0% |
! | ATAAGTATGCCTAAATTCTT+TGG | - | chr8_1:38531954-38531973 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr8_1:38532087-38532106 | None:intergenic | 25.0% |
! | GCTTGAAAATGAAAGAAAAA+GGG | - | chr8_1:38532366-38532385 | None:intergenic | 25.0% |
! | AATCGATTGATGAATATATG+AGG | - | chr8_1:38532541-38532560 | None:intergenic | 25.0% |
! | TCATCAATCAATCAAAATGT+AGG | + | chr8_1:38532754-38532773 | Msa1192640:intron | 25.0% |
! | TTACTAGTGAATTTATTTGC+TGG | + | chr8_1:38532971-38532990 | Msa1192640:intron | 25.0% |
! | AATGTAATTCTCTGTTGATA+CGG | - | chr8_1:38533083-38533102 | None:intergenic | 25.0% |
! | TATGTTAAGTTTATGTGTCT+AGG | + | chr8_1:38533159-38533178 | Msa1192640:intron | 25.0% |
! | GCATATCATAAGTATTACAT+AGG | - | chr8_1:38533213-38533232 | None:intergenic | 25.0% |
!! | TGTAGTATTGAAGAAACTAA+TGG | + | chr8_1:38533273-38533292 | Msa1192640:intron | 25.0% |
!!! | TTTTTTTGTGGTTACATCAA+TGG | + | chr8_1:38533309-38533328 | Msa1192640:intron | 25.0% |
! | TTTCCCACACTATATTAATA+AGG | + | chr8_1:38533452-38533471 | Msa1192640:intron | 25.0% |
! | CTATCCTTATTAATATAGTG+TGG | - | chr8_1:38533459-38533478 | None:intergenic | 25.0% |
!! | CCCTAAATTATAAGTCATTT+TGG | - | chr8_1:38533553-38533572 | None:intergenic | 25.0% |
! | TAAATAGTACATGTTTCTTG+TGG | + | chr8_1:38533633-38533652 | Msa1192640:intron | 25.0% |
AGTACCATACTTCTTTGATT+TGG | - | chr8_1:38529227-38529246 | None:intergenic | 30.0% | |
!! | TTTTGAAGATGAAGAAGATG+AGG | + | chr8_1:38529288-38529307 | Msa1192640:CDS | 30.0% |
ACATCTAAATAACCATTCCA+AGG | + | chr8_1:38529609-38529628 | Msa1192640:intron | 30.0% | |
TATCTCCAATTGACATATTG+GGG | - | chr8_1:38529718-38529737 | None:intergenic | 30.0% | |
GATATCTCCAATTGACATAT+TGG | - | chr8_1:38529720-38529739 | None:intergenic | 30.0% | |
CATTGCAATTGCAATTCTTA+CGG | - | chr8_1:38529763-38529782 | None:intergenic | 30.0% | |
ATATGTGAGCTTATTGTTAG+TGG | - | chr8_1:38530107-38530126 | None:intergenic | 30.0% | |
TAACAATAAGCTCACATATC+AGG | + | chr8_1:38530108-38530127 | Msa1192640:intron | 30.0% | |
TGCTACATAGTAGGTATAAA+AGG | - | chr8_1:38530216-38530235 | None:intergenic | 30.0% | |
! | ATTTAGGACAGCTTCTATAA+AGG | - | chr8_1:38530439-38530458 | None:intergenic | 30.0% |
ACAACTAAGGCATATTTCAA+AGG | - | chr8_1:38530465-38530484 | None:intergenic | 30.0% | |
GTATTTCTTTGCAACAACTA+AGG | - | chr8_1:38530478-38530497 | None:intergenic | 30.0% | |
TGAAACTTAATTTCAAACCG+CGG | - | chr8_1:38530518-38530537 | None:intergenic | 30.0% | |
GAATCAAAAGTTATTGGTAG+AGG | - | chr8_1:38530581-38530600 | None:intergenic | 30.0% | |
ATCACTATTCACATTCCATT+TGG | - | chr8_1:38530636-38530655 | None:intergenic | 30.0% | |
AAATGGAATGTGAATAGTGA+TGG | + | chr8_1:38530635-38530654 | Msa1192640:CDS | 30.0% | |
AATTTAGATATCCTCTCATC+TGG | - | chr8_1:38530731-38530750 | None:intergenic | 30.0% | |
AGATGAGAGGATATCTAAAT+TGG | + | chr8_1:38530730-38530749 | Msa1192640:CDS | 30.0% | |
GATGAGAGGATATCTAAATT+GGG | + | chr8_1:38530731-38530750 | Msa1192640:CDS | 30.0% | |
TAGAACATCAGACATTAGAA+CGG | - | chr8_1:38530930-38530949 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | - | chr8_1:38531277-38531296 | None:intergenic | 30.0% | |
! | GTTCTTTGAAGGTTATAAAG+AGG | + | chr8_1:38531277-38531296 | Msa1192640:CDS | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | - | chr8_1:38531353-38531372 | None:intergenic | 30.0% |
AATGAATAAACTCGTCACAA+TGG | - | chr8_1:38531388-38531407 | None:intergenic | 30.0% | |
GCAAAATCTTACATTGCTTA+TGG | + | chr8_1:38531500-38531519 | Msa1192640:CDS | 30.0% | |
TACAAAACTCCATTGTGATA+TGG | + | chr8_1:38531556-38531575 | Msa1192640:CDS | 30.0% | |
ATGTACTTTCAACGCTATAT+TGG | + | chr8_1:38531607-38531626 | Msa1192640:intron | 30.0% | |
TAAGGCTCAAGATATGAAAA+AGG | + | chr8_1:38531765-38531784 | Msa1192640:intron | 30.0% | |
AAGGCTCAAGATATGAAAAA+GGG | + | chr8_1:38531766-38531785 | Msa1192640:intron | 30.0% | |
!! | GGTCTTGTTAAATATAATGG+AGG | + | chr8_1:38531787-38531806 | Msa1192640:intron | 30.0% |
! | GATGTATCTTTTGTGATTGA+TGG | - | chr8_1:38531853-38531872 | None:intergenic | 30.0% |
TTATTGTTCTCCAGTAAAAG+AGG | + | chr8_1:38531970-38531989 | Msa1192640:intron | 30.0% | |
!! | CACTAACTATTTTGTTGCTT+AGG | + | chr8_1:38532053-38532072 | Msa1192640:intron | 30.0% |
!! | TTTTGAGTATAAGAAGAAGC+TGG | + | chr8_1:38532113-38532132 | Msa1192640:CDS | 30.0% |
AAAGAACAAAAAGGGTAAAG+AGG | - | chr8_1:38532340-38532359 | None:intergenic | 30.0% | |
CGCTTGAAAATGAAAGAAAA+AGG | - | chr8_1:38532367-38532386 | None:intergenic | 30.0% | |
AAACTTTCGTTAGTTGTTTG+TGG | + | chr8_1:38532411-38532430 | Msa1192640:intron | 30.0% | |
ACACAACTTCACAAGTAATA+TGG | - | chr8_1:38532457-38532476 | None:intergenic | 30.0% | |
GATTAAAATGCATGTGATCA+TGG | + | chr8_1:38532557-38532576 | Msa1192640:intron | 30.0% | |
ACATACTAGTACGTTACAAT+GGG | - | chr8_1:38532732-38532751 | None:intergenic | 30.0% | |
TACATACTAGTACGTTACAA+TGG | - | chr8_1:38532733-38532752 | None:intergenic | 30.0% | |
!! | TGAAAAGGAGCATCATATTA+TGG | + | chr8_1:38533046-38533065 | Msa1192640:intron | 30.0% |
ATGACAAAGTCAAGAAGCAA+AGG | + | chr8_1:38529328-38529347 | Msa1192640:CDS | 35.0% | |
ACAAATATGTGACCTTGGAA+TGG | - | chr8_1:38529624-38529643 | None:intergenic | 35.0% | |
TTGCAATTCTTACGGCAAAA+GGG | - | chr8_1:38529755-38529774 | None:intergenic | 35.0% | |
ATTGCAATTCTTACGGCAAA+AGG | - | chr8_1:38529756-38529775 | None:intergenic | 35.0% | |
AATGTTTGCTTGTGTTCAAG+AGG | + | chr8_1:38529779-38529798 | Msa1192640:intron | 35.0% | |
GAGATTGAAGCCAAAATACA+TGG | + | chr8_1:38530023-38530042 | Msa1192640:intron | 35.0% | |
GGTATCTCAATTTCTGAACA+TGG | - | chr8_1:38530138-38530157 | None:intergenic | 35.0% | |
TTATCATGACATGGAGTTTG+TGG | - | chr8_1:38530159-38530178 | None:intergenic | 35.0% | |
ACAAACTCCATGTCATGATA+AGG | + | chr8_1:38530158-38530177 | Msa1192640:intron | 35.0% | |
! | ATGATAAGGAGCGTATCTAT+TGG | + | chr8_1:38530172-38530191 | Msa1192640:intron | 35.0% |
ATGTGTCAATGCTACATAGT+AGG | - | chr8_1:38530225-38530244 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+CGG | + | chr8_1:38530482-38530501 | Msa1192640:CDS | 35.0% | |
TCTATAAGGTCACTTGACAT+CGG | - | chr8_1:38530863-38530882 | None:intergenic | 35.0% | |
!! | TTCCAAAAGTATTGGAGGAA+CGG | + | chr8_1:38530899-38530918 | Msa1192640:CDS | 35.0% |
AGAACATCAGACATTAGAAC+GGG | - | chr8_1:38530929-38530948 | None:intergenic | 35.0% | |
!! | GATGTTCTAAAAAAAGGGAC+AGG | + | chr8_1:38530941-38530960 | Msa1192640:CDS | 35.0% |
CTCTCTATATAAACCTTTGC+AGG | + | chr8_1:38531235-38531254 | Msa1192640:intron | 35.0% | |
! | GTGTCAATTTTTACCTGCAA+AGG | - | chr8_1:38531251-38531270 | None:intergenic | 35.0% |
! | TAAGATTTTGCACCTAAGTC+AGG | - | chr8_1:38531491-38531510 | None:intergenic | 35.0% |
AGCTTTCCTTTGATCTCAAA+AGG | - | chr8_1:38531814-38531833 | None:intergenic | 35.0% | |
AAAGATACATCAGAAACAGC+TGG | + | chr8_1:38531862-38531881 | Msa1192640:intron | 35.0% | |
AGTTTCTGCTCAAAAGTCAT+AGG | - | chr8_1:38532238-38532257 | None:intergenic | 35.0% | |
! | ATGACTTTTGAGCAGAAACT+TGG | + | chr8_1:38532238-38532257 | Msa1192640:CDS | 35.0% |
! | TCAGATTTCTAACTTGGTGA+GGG | - | chr8_1:38532291-38532310 | None:intergenic | 35.0% |
! | TTCAGATTTCTAACTTGGTG+AGG | - | chr8_1:38532292-38532311 | None:intergenic | 35.0% |
TCACCAAGTTAGAAATCTGA+AGG | + | chr8_1:38532291-38532310 | Msa1192640:CDS | 35.0% | |
TCACCTTCAGATTTCTAACT+TGG | - | chr8_1:38532297-38532316 | None:intergenic | 35.0% | |
AAGGGCAGAAAGAACAAAAA+GGG | - | chr8_1:38532348-38532367 | None:intergenic | 35.0% | |
AAAGGGCAGAAAGAACAAAA+AGG | - | chr8_1:38532349-38532368 | None:intergenic | 35.0% | |
!!! | TGGCTGTAGGTGTTTTTTTT+AGG | + | chr8_1:38532608-38532627 | Msa1192640:intron | 35.0% |
ACAAACCAGAAGAAATTGTG+AGG | - | chr8_1:38532637-38532656 | None:intergenic | 35.0% | |
TGTAAACATATCACCACGAA+TGG | - | chr8_1:38532677-38532696 | None:intergenic | 35.0% | |
CATACTAGTACGTTACAATG+GGG | - | chr8_1:38532731-38532750 | None:intergenic | 35.0% | |
GTGATCACAAATACACTCTT+TGG | + | chr8_1:38532776-38532795 | Msa1192640:intron | 35.0% | |
!!! | TACACTCTTTGGTTTTTGCT+AGG | + | chr8_1:38532787-38532806 | Msa1192640:intron | 35.0% |
!!! | ACACTCTTTGGTTTTTGCTA+GGG | + | chr8_1:38532788-38532807 | Msa1192640:intron | 35.0% |
TCACTCACAATACAAGTACA+GGG | - | chr8_1:38532857-38532876 | None:intergenic | 35.0% | |
TTGTATTGTGAGTGAGTTCA+TGG | + | chr8_1:38532862-38532881 | Msa1192640:intron | 35.0% | |
TGTATTGTGAGTGAGTTCAT+GGG | + | chr8_1:38532863-38532882 | Msa1192640:intron | 35.0% | |
TGACTTATAATTTAGGGGAG+AGG | + | chr8_1:38533556-38533575 | Msa1192640:intron | 35.0% | |
GACTTATAATTTAGGGGAGA+GGG | + | chr8_1:38533557-38533576 | Msa1192640:intron | 35.0% | |
GAGGATTACATGACATATAG+AGG | - | chr8_1:38533595-38533614 | None:intergenic | 35.0% | |
! | ATGCAGATATCCACATTTTC+TGG | - | chr8_1:38533749-38533768 | None:intergenic | 35.0% |
GTCAAGAAGCAAAGGAAAGT+TGG | + | chr8_1:38529336-38529355 | Msa1192640:CDS | 40.0% | |
ATGTCATCAGTGCTTGAGAA+AGG | + | chr8_1:38529508-38529527 | Msa1192640:intron | 40.0% | |
ATCAGTGCTTGAGAAAGGAT+AGG | + | chr8_1:38529513-38529532 | Msa1192640:intron | 40.0% | |
AGGTACCCCAATATGTCAAT+TGG | + | chr8_1:38529710-38529729 | Msa1192640:intron | 40.0% | |
TGCAATTCTTACGGCAAAAG+GGG | - | chr8_1:38529754-38529773 | None:intergenic | 40.0% | |
GTGTTCAAGAGGAATGATCA+AGG | + | chr8_1:38529790-38529809 | Msa1192640:intron | 40.0% | |
GTTACATTCACACGTCTAAC+AGG | + | chr8_1:38529901-38529920 | Msa1192640:intron | 40.0% | |
ATACGCTCCTTATCATGACA+TGG | - | chr8_1:38530168-38530187 | None:intergenic | 40.0% | |
AGAGGTGATGAATACATGCA+TGG | + | chr8_1:38530548-38530567 | Msa1192640:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+AGG | + | chr8_1:38530665-38530684 | Msa1192640:CDS | 40.0% | |
AATGCTCTCCAAGTAACCAT+TGG | - | chr8_1:38530980-38530999 | None:intergenic | 40.0% | |
! | TGTACAGGCTATTGATTGCT+TGG | + | chr8_1:38531045-38531064 | Msa1192640:CDS | 40.0% |
! | TGATTGCTTGGTTAGTTGTG+AGG | + | chr8_1:38531057-38531076 | Msa1192640:CDS | 40.0% |
GTAAGAACGATCATCACCAA+AGG | - | chr8_1:38531104-38531123 | None:intergenic | 40.0% | |
!!! | TCTTTTAGCTTGAGCATCTC+TGG | - | chr8_1:38531326-38531345 | None:intergenic | 40.0% |
AGATGCTCAAGCTAAAAGAC+TGG | + | chr8_1:38531327-38531346 | Msa1192640:CDS | 40.0% | |
GGATCGCAATACTCTTGAAA+TGG | - | chr8_1:38531416-38531435 | None:intergenic | 40.0% | |
! | AGGTTTAGAATTCCAGATCG+AGG | - | chr8_1:38531437-38531456 | None:intergenic | 40.0% |
! | AAGTCAGGCTTTATGACATG+TGG | - | chr8_1:38531476-38531495 | None:intergenic | 40.0% |
CATGTCATAAAGCCTGACTT+AGG | + | chr8_1:38531476-38531495 | Msa1192640:CDS | 40.0% | |
TATGGAACCATAGAAGAGCT+TGG | + | chr8_1:38531518-38531537 | Msa1192640:CDS | 40.0% | |
TTGGTGCGACAAGTATAAGA+TGG | + | chr8_1:38531626-38531645 | Msa1192640:intron | 40.0% | |
TGAGTATAAGAAGAAGCTGG+AGG | + | chr8_1:38532116-38532135 | Msa1192640:CDS | 40.0% | |
GAAGCAGTATTTATACCTGC+TGG | + | chr8_1:38532262-38532281 | Msa1192640:CDS | 40.0% | |
GGTTACCTCACAATTTCTTC+TGG | + | chr8_1:38532629-38532648 | Msa1192640:intron | 40.0% | |
CTCACTCACAATACAAGTAC+AGG | - | chr8_1:38532858-38532877 | None:intergenic | 40.0% | |
GTATTGTGAGTGAGTTCATG+GGG | + | chr8_1:38532864-38532883 | Msa1192640:intron | 40.0% | |
ATTCAAGCGACCAAGAAACA+TGG | - | chr8_1:38532890-38532909 | None:intergenic | 40.0% | |
GCAGAATCTCTTGAGCATGT+TGG | - | chr8_1:38529157-38529176 | None:intergenic | 45.0% | |
CAATTGGAGATATCGCAGAG+AGG | + | chr8_1:38529726-38529745 | Msa1192640:CDS | 45.0% | |
CGACACGATCACGTCAATAT+TGG | - | chr8_1:38530293-38530312 | None:intergenic | 45.0% | |
GGTGATGAATACATGCATGG+TGG | + | chr8_1:38530551-38530570 | Msa1192640:CDS | 45.0% | |
TGTGCTCCAAAAGAACTAGG+TGG | + | chr8_1:38530668-38530687 | Msa1192640:CDS | 45.0% | |
!! | CCACAACCACCTAGTTCTTT+TGG | - | chr8_1:38530677-38530696 | None:intergenic | 45.0% |
CCAAAAGAACTAGGTGGTTG+TGG | + | chr8_1:38530674-38530693 | Msa1192640:CDS | 45.0% | |
AAAGAACTAGGTGGTTGTGG+TGG | + | chr8_1:38530677-38530696 | Msa1192640:CDS | 45.0% | |
AACGCATTCTTCCAGATGAG+AGG | + | chr8_1:38530717-38530736 | Msa1192640:CDS | 45.0% | |
TAAGGTCACTTGACATCGGA+CGG | - | chr8_1:38530859-38530878 | None:intergenic | 45.0% | |
! | CACCGTTCCTCCAATACTTT+TGG | - | chr8_1:38530904-38530923 | None:intergenic | 45.0% |
AAAAAGGGACAGGACTGAGT+TGG | + | chr8_1:38530951-38530970 | Msa1192640:CDS | 45.0% | |
AAAAGGGACAGGACTGAGTT+GGG | + | chr8_1:38530952-38530971 | Msa1192640:CDS | 45.0% | |
ATAAACTCGTCACAATGGCG+CGG | - | chr8_1:38531383-38531402 | None:intergenic | 45.0% | |
! | TCAGGCTTTATGACATGTGG+TGG | - | chr8_1:38531473-38531492 | None:intergenic | 45.0% |
CCATTGTGATATGGCAGACA+CGG | + | chr8_1:38531565-38531584 | Msa1192640:CDS | 45.0% | |
!!! | GGAGGTCCTTTTGAGATCAA+AGG | + | chr8_1:38531805-38531824 | Msa1192640:intron | 45.0% |
AGAAACAGCTGGTGCACTTT+GGG | + | chr8_1:38531873-38531892 | Msa1192640:intron | 45.0% | |
AAGAAGCTGGAGGCAGAATT+TGG | + | chr8_1:38532126-38532145 | Msa1192640:CDS | 45.0% | |
TCTGAGTCCTAGTTGAGAGT+CGG | + | chr8_1:38532583-38532602 | Msa1192640:intron | 45.0% | |
CACCACGAATGGTAGCTTAA+GGG | - | chr8_1:38532666-38532685 | None:intergenic | 45.0% | |
TCACCACGAATGGTAGCTTA+AGG | - | chr8_1:38532667-38532686 | None:intergenic | 45.0% | |
CTTCGTGTCACCAGAAAATG+TGG | + | chr8_1:38533736-38533755 | Msa1192640:CDS | 45.0% | |
GTTGGGAGCCAATGGTTACT+TGG | + | chr8_1:38530969-38530988 | Msa1192640:CDS | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | + | chr8_1:38531266-38531285 | Msa1192640:CDS | 50.0% | |
! | GAGTATTGCGATCCTCGATC+TGG | + | chr8_1:38531422-38531441 | Msa1192640:CDS | 50.0% |
GGAACCATAGAAGAGCTTGG+CGG | + | chr8_1:38531521-38531540 | Msa1192640:CDS | 50.0% | |
CCGTGTCTGCCATATCACAA+TGG | - | chr8_1:38531568-38531587 | None:intergenic | 50.0% | |
CAGAAACAGCTGGTGCACTT+TGG | + | chr8_1:38531872-38531891 | Msa1192640:intron | 50.0% | |
TTGTGGCCATGTCTCATGTG+AGG | + | chr8_1:38532428-38532447 | Msa1192640:intron | 50.0% | |
TGTGGCCATGTCTCATGTGA+GGG | + | chr8_1:38532429-38532448 | Msa1192640:intron | 50.0% | |
TGGTTCCCTCACATGAGACA+TGG | - | chr8_1:38532437-38532456 | None:intergenic | 50.0% | |
GTCCTAGTTGAGAGTCGGTT+TGG | + | chr8_1:38532588-38532607 | Msa1192640:intron | 50.0% | |
! | AGCCAAACCGACTCTCAACT+AGG | - | chr8_1:38532593-38532612 | None:intergenic | 50.0% |
!! | TTGAGAGTCGGTTTGGCTGT+AGG | + | chr8_1:38532595-38532614 | Msa1192640:intron | 50.0% |
TGCCCTTAAGCTACCATTCG+TGG | + | chr8_1:38532661-38532680 | Msa1192640:intron | 50.0% | |
TTTGCTAGGGACGTCTTGTG+TGG | + | chr8_1:38532801-38532820 | Msa1192640:intron | 50.0% | |
TTGCTAGGGACGTCTTGTGT+GGG | + | chr8_1:38532802-38532821 | Msa1192640:intron | 50.0% | |
GTTCATGGGGCCATGTTTCT+TGG | + | chr8_1:38532877-38532896 | Msa1192640:intron | 50.0% | |
!! | GCAACGGAAGTATCACACCG+CGG | + | chr8_1:38530498-38530517 | Msa1192640:CDS | 55.0% |
TGGTTGTGGTGGCTGTGTGA+TGG | + | chr8_1:38530688-38530707 | Msa1192640:CDS | 55.0% | |
! | AGGACTGAGTTGGGAGCCAA+TGG | + | chr8_1:38530961-38530980 | Msa1192640:CDS | 55.0% |
GTGGTGGCAACTTTGCAGCA+AGG | - | chr8_1:38531457-38531476 | None:intergenic | 55.0% | |
ACCATAGAAGAGCTTGGCGG+AGG | + | chr8_1:38531524-38531543 | Msa1192640:CDS | 55.0% | |
TCCTCCGCCAAGCTCTTCTA+TGG | - | chr8_1:38531528-38531547 | None:intergenic | 55.0% | |
GAGCTTGGCGGAGGAGATTG+TGG | + | chr8_1:38531533-38531552 | Msa1192640:CDS | 60.0% | |
!! | ACTTGGTGAGGGCATCCAGC+AGG | - | chr8_1:38532280-38532299 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 38529049 | 38533811 | 38529049 | ID=Msa1192640;Name=Msa1192640 |
chr8_1 | mRNA | 38529049 | 38533811 | 38529049 | ID=Msa1192640-mRNA-1;Parent=Msa1192640;Name=Msa1192640-mRNA-1;_AED=0.24;_eAED=0.26;_QI=0|0|0|1|1|1|7|0|542 |
chr8_1 | exon | 38529049 | 38529369 | 38529049 | ID=Msa1192640-mRNA-1:exon:12589;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38529712 | 38529761 | 38529712 | ID=Msa1192640-mRNA-1:exon:12590;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38530409 | 38531078 | 38530409 | ID=Msa1192640-mRNA-1:exon:12591;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38531257 | 38531586 | 38531257 | ID=Msa1192640-mRNA-1:exon:12592;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38532075 | 38532147 | 38532075 | ID=Msa1192640-mRNA-1:exon:12593;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38532227 | 38532312 | 38532227 | ID=Msa1192640-mRNA-1:exon:12594;Parent=Msa1192640-mRNA-1 |
chr8_1 | exon | 38533713 | 38533811 | 38533713 | ID=Msa1192640-mRNA-1:exon:12595;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38529049 | 38529369 | 38529049 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38529712 | 38529761 | 38529712 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38530409 | 38531078 | 38530409 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38531257 | 38531586 | 38531257 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38532075 | 38532147 | 38532075 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38532227 | 38532312 | 38532227 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
chr8_1 | CDS | 38533713 | 38533811 | 38533713 | ID=Msa1192640-mRNA-1:cds;Parent=Msa1192640-mRNA-1 |
Gene Sequence |
Protein sequence |