Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102070 | Msa0979410 | 0.816136 | 6.460141e-52 | -8.615850e-47 |
| Msa0636170 | Msa0979410 | 0.800847 | 1.189622e-48 | -8.615850e-47 |
| Msa0639610 | Msa0979410 | 0.840998 | 6.200366e-58 | -8.615850e-47 |
| Msa0678930 | Msa0979410 | 0.804690 | 1.913475e-49 | -8.615850e-47 |
| Msa0694370 | Msa0979410 | 0.816220 | 6.188221e-52 | -8.615850e-47 |
| Msa0726140 | Msa0979410 | 0.852263 | 5.178087e-61 | -8.615850e-47 |
| Msa0729800 | Msa0979410 | 0.825421 | 4.730707e-54 | -8.615850e-47 |
| Msa0733290 | Msa0979410 | 0.813161 | 2.944526e-51 | -8.615850e-47 |
| Msa0741990 | Msa0979410 | 0.800125 | 1.668843e-48 | -8.615850e-47 |
| Msa0743810 | Msa0979410 | 0.804756 | 1.854259e-49 | -8.615850e-47 |
| Msa0745060 | Msa0979410 | 0.829546 | 4.846869e-55 | -8.615850e-47 |
| Msa0783160 | Msa0979410 | 0.844933 | 5.561429e-59 | -8.615850e-47 |
| Msa0808010 | Msa0979410 | 0.826598 | 2.484961e-54 | -8.615850e-47 |
| Msa0808020 | Msa0979410 | 0.821567 | 3.769700e-53 | -8.615850e-47 |
| Msa0811080 | Msa0979410 | 0.808918 | 2.446104e-50 | -8.615850e-47 |
| Msa0811270 | Msa0979410 | 0.803846 | 2.868002e-49 | -8.615850e-47 |
| Msa0825860 | Msa0979410 | 0.836553 | 8.749959e-57 | -8.615850e-47 |
| Msa0142220 | Msa0979410 | 0.813401 | 2.608354e-51 | -8.615850e-47 |
| Msa0145750 | Msa0979410 | 0.802470 | 5.524649e-49 | -8.615850e-47 |
| Msa0188460 | Msa0979410 | 0.816526 | 5.284178e-52 | -8.615850e-47 |
| Msa0227480 | Msa0979410 | 0.820022 | 8.540576e-53 | -8.615850e-47 |
| Msa0232850 | Msa0979410 | 0.811215 | 7.828092e-51 | -8.615850e-47 |
| Msa0384800 | Msa0979410 | 0.831137 | 1.979806e-55 | -8.615850e-47 |
| Msa0384890 | Msa0979410 | 0.803887 | 2.812255e-49 | -8.615850e-47 |
| Msa0406120 | Msa0979410 | 0.812939 | 3.293643e-51 | -8.615850e-47 |
| Msa0414420 | Msa0979410 | 0.803168 | 3.964244e-49 | -8.615850e-47 |
| Msa0435230 | Msa0979410 | 0.806867 | 6.677664e-50 | -8.615850e-47 |
| Msa0452900 | Msa0979410 | 0.824393 | 8.269203e-54 | -8.615850e-47 |
| Msa0454910 | Msa0979410 | 0.803649 | 3.151858e-49 | -8.615850e-47 |
| Msa0479340 | Msa0979410 | 0.822418 | 2.394610e-53 | -8.615850e-47 |
| Msa0267000 | Msa0979410 | 0.822355 | 2.476104e-53 | -8.615850e-47 |
| Msa0267010 | Msa0979410 | 0.824857 | 6.432048e-54 | -8.615850e-47 |
| Msa0270520 | Msa0979410 | 0.811144 | 8.108268e-51 | -8.615850e-47 |
| Msa0360510 | Msa0979410 | 0.802711 | 4.927036e-49 | -8.615850e-47 |
| Msa0363300 | Msa0979410 | 0.802881 | 4.546105e-49 | -8.615850e-47 |
| Msa0491590 | Msa0979410 | 0.822841 | 1.909241e-53 | -8.615850e-47 |
| Msa0502270 | Msa0979410 | 0.810676 | 1.024095e-50 | -8.615850e-47 |
| Msa0502760 | Msa0979410 | 0.805723 | 1.163004e-49 | -8.615850e-47 |
| Msa0846210 | Msa0979410 | 0.824524 | 7.702903e-54 | -8.615850e-47 |
| Msa0846330 | Msa0979410 | 0.821686 | 3.539121e-53 | -8.615850e-47 |
| Msa0846350 | Msa0979410 | 0.853244 | 2.716966e-61 | -8.615850e-47 |
| Msa0848960 | Msa0979410 | 0.804732 | 1.875745e-49 | -8.615850e-47 |
| Msa0858980 | Msa0979410 | 0.800480 | 1.412804e-48 | -8.615850e-47 |
| Msa0865320 | Msa0979410 | 0.816728 | 4.761492e-52 | -8.615850e-47 |
| Msa0885290 | Msa0979410 | 0.807744 | 4.353331e-50 | -8.615850e-47 |
| Msa0888370 | Msa0979410 | 0.805424 | 1.343774e-49 | -8.615850e-47 |
| Msa0899600 | Msa0979410 | 0.823999 | 1.023318e-53 | -8.615850e-47 |
| Msa0957860 | Msa0979410 | 0.821192 | 4.602013e-53 | -8.615850e-47 |
| Msa0957960 | Msa0979410 | 0.821575 | 3.754234e-53 | -8.615850e-47 |
| Msa0979410 | Msa0981370 | 0.823279 | 1.509187e-53 | -8.615850e-47 |
| Msa0979410 | Msa0989060 | 0.840039 | 1.105286e-57 | -8.615850e-47 |
| Msa0979410 | Msa1016280 | 0.813580 | 2.382198e-51 | -8.615850e-47 |
| Msa0979410 | Msa1024240 | 0.811709 | 6.111585e-51 | -8.615850e-47 |
| Msa0979410 | Msa1025360 | 0.819496 | 1.126545e-52 | -8.615850e-47 |
| Msa0979410 | Msa1025370 | 0.823351 | 1.451677e-53 | -8.615850e-47 |
| Msa0979410 | Msa1044830 | 0.818001 | 2.461938e-52 | -8.615850e-47 |
| Msa0979410 | Msa1044840 | 0.822721 | 2.035753e-53 | -8.615850e-47 |
| Msa0979410 | Msa1092990 | 0.826984 | 2.009742e-54 | -8.615850e-47 |
| Msa0979410 | Msa1100980 | 0.846369 | 2.268716e-59 | -8.615850e-47 |
| Msa0979410 | Msa1111150 | 0.800535 | 1.376951e-48 | -8.615850e-47 |
| Msa0979410 | Msa1121200 | 0.812796 | 3.540162e-51 | -8.615850e-47 |
| Msa0979410 | Msa1135740 | 0.824037 | 1.002581e-53 | -8.615850e-47 |
| Msa0979410 | Msa1137690 | 0.824068 | 9.862451e-54 | -8.615850e-47 |
| Msa0979410 | Msa1187950 | 0.818785 | 1.634980e-52 | -8.615850e-47 |
| Msa0979410 | Msa1269670 | 0.823152 | 1.615193e-53 | -8.615850e-47 |
| Msa0979410 | Msa1270230 | 0.801880 | 7.307924e-49 | -8.615850e-47 |
| Msa0979410 | Msa1270240 | 0.816347 | 5.796667e-52 | -8.615850e-47 |
| Msa0979410 | Msa1270270 | 0.808882 | 2.489862e-50 | -8.615850e-47 |
| Msa0979410 | Msa1283330 | 0.826832 | 2.184975e-54 | -8.615850e-47 |
| Msa0979410 | Msa1284680 | 0.802224 | 6.210197e-49 | -8.615850e-47 |
| Msa0979410 | Msa1285930 | 0.819093 | 1.391888e-52 | -8.615850e-47 |
| Msa0979410 | Msa1287810 | 0.808252 | 3.393681e-50 | -8.615850e-47 |
| Msa0979410 | Msa1289430 | 0.801105 | 1.053405e-48 | -8.615850e-47 |
| Msa0979410 | Msa1313980 | 0.813182 | 2.912838e-51 | -8.615850e-47 |
| Msa0979410 | Msa1340590 | 0.814681 | 1.361478e-51 | -8.615850e-47 |
| Msa0979410 | Msa1382690 | 0.810440 | 1.151430e-50 | -8.615850e-47 |
| Msa0979410 | Msa1386330 | 0.806485 | 8.039981e-50 | -8.615850e-47 |
| Msa0979410 | Msa1397580 | 0.818770 | 1.648068e-52 | -8.615850e-47 |
| Msa0979410 | Msa1402790 | 0.804574 | 2.023586e-49 | -8.615850e-47 |
| Msa0979410 | Msa1404000 | 0.855086 | 7.985309e-62 | -8.615850e-47 |
| Msa0979410 | Msa1415310 | 0.812263 | 4.629425e-51 | -8.615850e-47 |
| Msa0979410 | Msa1422180 | 0.835155 | 1.978212e-56 | -8.615850e-47 |
| Msa0979410 | Msa1433120 | 0.818115 | 2.319714e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 77 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAAATCGCTGGAGTTTC+TGG | 0.154961 | 6_4:+16339631 | None:intergenic |
| TTCTTCTAATTCCATGGTTT+GGG | 0.195550 | 6_4:-16339501 | Msa0979410:five_prime_UTR |
| AGGAGAAATCAATTCATTTC+AGG | 0.203327 | 6_4:+16338557 | None:intergenic |
| GGGAAATTGGGGAAGGAAAA+TGG | 0.203851 | 6_4:-16339291 | Msa0979410:five_prime_UTR |
| ATTCAGACGACGATGAAATT+AGG | 0.205568 | 6_4:+16339555 | None:intergenic |
| CAGGGACTTGTGGTGATTCT+TGG | 0.210394 | 6_4:+16338576 | None:intergenic |
| CAAATATCAGATTGTGAAAA+TGG | 0.230622 | 6_4:-16338968 | Msa0979410:intron |
| CTTCTTCTAATTCCATGGTT+TGG | 0.270060 | 6_4:-16339502 | Msa0979410:five_prime_UTR |
| TCGTTGCAGTCGAAATTTAA+AGG | 0.299427 | 6_4:+16339612 | None:intergenic |
| CATGATGGCAGGCTTTGATT+TGG | 0.327060 | 6_4:-16335468 | Msa0979410:exon |
| GGACCAATTGGCAATTGGTT+TGG | 0.342208 | 6_4:-16336250 | Msa0979410:CDS |
| TATTTCATGTTTGATAATCA+TGG | 0.354160 | 6_4:+16336500 | None:intergenic |
| TGTTGTTGAGTTGGGAAATT+GGG | 0.355972 | 6_4:-16339303 | Msa0979410:five_prime_UTR |
| TTCAGACGACGATGAAATTA+GGG | 0.358324 | 6_4:+16339556 | None:intergenic |
| TTGTTGTTGAGTTGGGAAAT+TGG | 0.360942 | 6_4:-16339304 | Msa0979410:five_prime_UTR |
| ATCATGAGGCCCTCCATCTA+TGG | 0.361390 | 6_4:+16335485 | None:intergenic |
| AGCTCATCAGTTGAGTTCAT+TGG | 0.369060 | 6_4:+16335423 | None:intergenic |
| TTTGGAGGCGGAGAAGGATT+TGG | 0.370838 | 6_4:-16339371 | Msa0979410:five_prime_UTR |
| TTTGAGGAGGAAAGAGGTGT+TGG | 0.388988 | 6_4:-16339338 | Msa0979410:five_prime_UTR |
| ATGAATTGATTTCTCCTCAA+TGG | 0.395759 | 6_4:-16338551 | Msa0979410:exon |
| ACGGTTGTTGTTGTTGAGTT+GGG | 0.398065 | 6_4:-16339311 | Msa0979410:five_prime_UTR |
| TACGCACTCTCTGCCATAGA+TGG | 0.403758 | 6_4:-16335498 | Msa0979410:CDS |
| TAATCATGTTTATTTAGATC+TGG | 0.404413 | 6_4:-16339234 | Msa0979410:intron |
| TCCGTCTTCTTCTAATTCCA+TGG | 0.409159 | 6_4:-16339507 | Msa0979410:five_prime_UTR |
| GGAGAAATCAATTCATTTCA+GGG | 0.419709 | 6_4:+16338558 | None:intergenic |
| GGAAAGAGGTGTTGGGAGGA+CGG | 0.429162 | 6_4:-16339330 | Msa0979410:five_prime_UTR |
| GATTATATCAAGAAAGTTGT+TGG | 0.436019 | 6_4:-16336080 | Msa0979410:intron |
| GACGGTTGTTGTTGTTGAGT+TGG | 0.437977 | 6_4:-16339312 | Msa0979410:five_prime_UTR |
| TATATGGACCAATTGGCAAT+TGG | 0.438213 | 6_4:-16336255 | Msa0979410:CDS |
| ACTAAAGATGAAGAGGATAT+AGG | 0.440064 | 6_4:+16335282 | None:intergenic |
| GGAAATTGGGGAAGGAAAAT+GGG | 0.440721 | 6_4:-16339290 | Msa0979410:five_prime_UTR |
| CAATTCTTATATGGACCAAT+TGG | 0.445211 | 6_4:-16336262 | Msa0979410:CDS |
| ATTTCATGTTTGATAATCAT+GGG | 0.447750 | 6_4:+16336501 | None:intergenic |
| TTGAGGAGGAAAGAGGTGTT+GGG | 0.454474 | 6_4:-16339337 | Msa0979410:five_prime_UTR |
| ATTTGGTACGCCGGAGTTTG+AGG | 0.455156 | 6_4:-16339354 | Msa0979410:five_prime_UTR |
| TATCCAAACCAATTGCCAAT+TGG | 0.474037 | 6_4:+16336247 | None:intergenic |
| TTCAAAGACTTGATTGAAGT+GGG | 0.482463 | 6_4:-16339469 | Msa0979410:five_prime_UTR |
| TTTCTCCTCAATGGATAAGA+AGG | 0.483610 | 6_4:-16338542 | Msa0979410:intron |
| GGAATATGCTGCAATGCTAC+AGG | 0.488339 | 6_4:+16339427 | None:intergenic |
| CAATTCATTTCAGGGACTTG+TGG | 0.491062 | 6_4:+16338566 | None:intergenic |
| GATTTGGAGACTTGACTGAC+TGG | 0.506827 | 6_4:-16335452 | Msa0979410:three_prime_UTR |
| CACAAGCACTAAAGATGAAG+AGG | 0.519093 | 6_4:+16335275 | None:intergenic |
| TGCAAAGTTCGTTTGAGACA+TGG | 0.521220 | 6_4:-16338601 | Msa0979410:intron |
| TCTTCTAATTCCATGGTTTG+GGG | 0.526326 | 6_4:-16339500 | Msa0979410:five_prime_UTR |
| CGAAATTTAAAGGAAATCGC+TGG | 0.532190 | 6_4:+16339622 | None:intergenic |
| TTTCAAAGACTTGATTGAAG+TGG | 0.538292 | 6_4:-16339470 | Msa0979410:five_prime_UTR |
| TCTCACCTTCTTATCCATTG+AGG | 0.546630 | 6_4:+16338537 | None:intergenic |
| TTGAGTTGGGAAATTGGGGA+AGG | 0.548020 | 6_4:-16339298 | Msa0979410:five_prime_UTR |
| AGGAGGAAAGAGGTGTTGGG+AGG | 0.555497 | 6_4:-16339334 | Msa0979410:five_prime_UTR |
| ATTGGTCCATATAAGAATTG+TGG | 0.557474 | 6_4:+16336265 | None:intergenic |
| ATGGAGGGCCTCATGATGGC+AGG | 0.558411 | 6_4:-16335479 | Msa0979410:CDS |
| CACTCTCTGCCATAGATGGA+GGG | 0.562622 | 6_4:-16335494 | Msa0979410:CDS |
| CCTCTTTCCTCCTCAAACTC+CGG | 0.579183 | 6_4:+16339344 | None:intergenic |
| TTTCTGGTCGGCAGTATCGT+CGG | 0.581347 | 6_4:+16339647 | None:intergenic |
| GAGAAGCACTTGTATCAAGT+GGG | 0.584100 | 6_4:-16335394 | Msa0979410:three_prime_UTR |
| CCGGAGTTTGAGGAGGAAAG+AGG | 0.584183 | 6_4:-16339344 | Msa0979410:five_prime_UTR |
| TCCGGCACATTCGTACGTCA+AGG | 0.593205 | 6_4:+16339406 | None:intergenic |
| AGAGAAGCACTTGTATCAAG+TGG | 0.594141 | 6_4:-16335395 | Msa0979410:three_prime_UTR |
| AAATTGCTAAGAGAATCAAT+AGG | 0.600008 | 6_4:-16338943 | Msa0979410:five_prime_UTR |
| ATGTGAGGTGAAGTGCTTGA+CGG | 0.600122 | 6_4:-16335538 | Msa0979410:CDS |
| TGGTACGCCGGAGTTTGAGG+AGG | 0.608306 | 6_4:-16339351 | Msa0979410:five_prime_UTR |
| ATAGATGGAGGGCCTCATGA+TGG | 0.610460 | 6_4:-16335483 | Msa0979410:CDS |
| TTTCATGTTTGATAATCATG+GGG | 0.611703 | 6_4:+16336502 | None:intergenic |
| AAAGCAAAATCCCCAAACCA+TGG | 0.612922 | 6_4:+16339490 | None:intergenic |
| TCCTTGACGTACGAATGTGC+CGG | 0.614234 | 6_4:-16339407 | Msa0979410:five_prime_UTR |
| GCACTCTCTGCCATAGATGG+AGG | 0.618008 | 6_4:-16335495 | Msa0979410:CDS |
| CACAAGTCTTGAAGAATGTG+AGG | 0.621403 | 6_4:-16335553 | Msa0979410:CDS |
| AATAGGACAATCAGTCACCT+AGG | 0.625532 | 6_4:-16338926 | Msa0979410:five_prime_UTR |
| GTTGTTGAGTTGGGAAATTG+GGG | 0.635728 | 6_4:-16339302 | Msa0979410:five_prime_UTR |
| AATCAAAGCCTGCCATCATG+AGG | 0.640403 | 6_4:+16335471 | None:intergenic |
| ACCATGGAATTAGAAGAAGA+CGG | 0.659255 | 6_4:+16339506 | None:intergenic |
| AAATCGCTGGAGTTTCTGGT+CGG | 0.660964 | 6_4:+16339635 | None:intergenic |
| GGAAAATGGGTATATGAGTG+CGG | 0.672619 | 6_4:-16339277 | Msa0979410:five_prime_UTR |
| CGGAGAAGGATTTGGTACGC+CGG | 0.674775 | 6_4:-16339363 | Msa0979410:five_prime_UTR |
| CTGGTCGGCAGTATCGTCGG+TGG | 0.694633 | 6_4:+16339650 | None:intergenic |
| AGAAGCACTTGTATCAAGTG+GGG | 0.702083 | 6_4:-16335393 | Msa0979410:three_prime_UTR |
| AAATGGGTATATGAGTGCGG+CGG | 0.712414 | 6_4:-16339274 | Msa0979410:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATTTACTTATGAATT+GGG | - | chr6_4:16335824-16335843 | Msa0979410:intron | 10.0% |
| !! | AAATAATATGATATTATGAT+TGG | + | chr6_4:16338271-16338290 | None:intergenic | 10.0% |
| !!! | TTTGTAGCTATAATTTTTTA+CGG | - | chr6_4:16335764-16335783 | Msa0979410:intron | 15.0% |
| !! | GTTATAATTTACTTATGAAT+TGG | - | chr6_4:16335823-16335842 | Msa0979410:intron | 15.0% |
| !! | AACATATGGAATTTATAATA+TGG | - | chr6_4:16336581-16336600 | Msa0979410:intron | 15.0% |
| !!! | TAGTAATTTAGTTTGAAATT+TGG | - | chr6_4:16336708-16336727 | Msa0979410:intron | 15.0% |
| !!! | ATTAGTTTATTATATAGAGA+AGG | + | chr6_4:16336750-16336769 | None:intergenic | 15.0% |
| !! | TAATGCATTAAAAAAAAGAA+GGG | + | chr6_4:16337031-16337050 | None:intergenic | 15.0% |
| !! | TTAATGCATTAAAAAAAAGA+AGG | + | chr6_4:16337032-16337051 | None:intergenic | 15.0% |
| !! | TATCATTATAAATTAATCCA+AGG | + | chr6_4:16337968-16337987 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGCTTATTATAAA+TGG | - | chr6_4:16339056-16339075 | Msa0979410:intron | 15.0% |
| !!! | TAGTTTTTTTTTTTAGTAAG+TGG | - | chr6_4:16339576-16339595 | Msa0979410:five_prime_UTR | 15.0% |
| !!! | AGTTTTTTTTTTTAGTAAGT+GGG | - | chr6_4:16339577-16339596 | Msa0979410:five_prime_UTR | 15.0% |
| !! | TAATCATGTTTATTTAGATC+TGG | - | chr6_4:16335708-16335727 | Msa0979410:intron | 20.0% |
| !! | ATATTTGGTTATGATATTGT+TGG | - | chr6_4:16335859-16335878 | Msa0979410:intron | 20.0% |
| !! | ATTCAAATTAATTACAAGCA+GGG | + | chr6_4:16335938-16335957 | None:intergenic | 20.0% |
| !! | AATTCAAATTAATTACAAGC+AGG | + | chr6_4:16335939-16335958 | None:intergenic | 20.0% |
| !!! | TTAATTTGAATTTGTTGTTG+TGG | - | chr6_4:16335947-16335966 | Msa0979410:intron | 20.0% |
| !! | TTCAGCACAAAAAAAATTAT+TGG | + | chr6_4:16336264-16336283 | None:intergenic | 20.0% |
| !!! | ACTTCTAATTGTTCTTTTAT+TGG | - | chr6_4:16336303-16336322 | Msa0979410:intron | 20.0% |
| !!! | CTTCTAATTGTTCTTTTATT+GGG | - | chr6_4:16336304-16336323 | Msa0979410:intron | 20.0% |
| !!! | TTCTAATTGTTCTTTTATTG+GGG | - | chr6_4:16336305-16336324 | Msa0979410:intron | 20.0% |
| !! | AAGTTATTTACTAATGCAAA+GGG | + | chr6_4:16336994-16337013 | None:intergenic | 20.0% |
| !! | AATTTAGGAAGTAGTAATTA+GGG | + | chr6_4:16337122-16337141 | None:intergenic | 20.0% |
| !!! | ATCTTTAACTTGTACAATTT+AGG | + | chr6_4:16337137-16337156 | None:intergenic | 20.0% |
| !!! | ATTGATTTTTTTGTTAGTCT+TGG | - | chr6_4:16337197-16337216 | Msa0979410:intron | 20.0% |
| !!! | ATTTTGAATTTCATCGATAA+AGG | - | chr6_4:16337431-16337450 | Msa0979410:intron | 20.0% |
| !! | ATAAAATACCTGAAATTAGA+AGG | + | chr6_4:16337539-16337558 | None:intergenic | 20.0% |
| !! | CCAATAATAACTACAAAAAA+TGG | + | chr6_4:16337776-16337795 | None:intergenic | 20.0% |
| !!! | CCATTTTTTGTAGTTATTAT+TGG | - | chr6_4:16337773-16337792 | Msa0979410:intron | 20.0% |
| !! | TTAACTGATCATCAAAATAA+AGG | + | chr6_4:16338131-16338150 | None:intergenic | 20.0% |
| !!! | ATTTCATGTTTGATAATCAT+GGG | + | chr6_4:16338444-16338463 | None:intergenic | 20.0% |
| !!! | TATTTCATGTTTGATAATCA+TGG | + | chr6_4:16338445-16338464 | None:intergenic | 20.0% |
| !!! | TAATATCTTTTTTTAAGAGC+AGG | - | chr6_4:16338748-16338767 | Msa0979410:intron | 20.0% |
| !!! | AATATCTTTTTTTAAGAGCA+GGG | - | chr6_4:16338749-16338768 | Msa0979410:intron | 20.0% |
| !!! | TTTAATTTTAGACTCATTGT+AGG | - | chr6_4:16338803-16338822 | Msa0979410:intron | 20.0% |
| !!! | TTAATTTTAGACTCATTGTA+GGG | - | chr6_4:16338804-16338823 | Msa0979410:intron | 20.0% |
| !!! | AATTTTATAAAGCATTCAAG+AGG | + | chr6_4:16339228-16339247 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTAGTAAGTG+GGG | - | chr6_4:16339578-16339597 | Msa0979410:five_prime_UTR | 20.0% |
| !!! | CGAAAACATTTGATTTTGAT+TGG | - | chr6_4:16335350-16335369 | Msa0979410:three_prime_UTR | 25.0% |
| !!! | AGCTATAATTTTTTACGGTT+TGG | - | chr6_4:16335769-16335788 | Msa0979410:intron | 25.0% |
| !!! | GGGTTTTTTGTTTTCATATT+TGG | - | chr6_4:16335844-16335863 | Msa0979410:intron | 25.0% |
| ! | CAAATATCAGATTGTGAAAA+TGG | - | chr6_4:16335974-16335993 | Msa0979410:intron | 25.0% |
| ! | AAATTGCTAAGAGAATCAAT+AGG | - | chr6_4:16335999-16336018 | Msa0979410:intron | 25.0% |
| !!! | TTTTGTTTCTCAATCACTTT+AGG | - | chr6_4:16336075-16336094 | Msa0979410:intron | 25.0% |
| !!! | TTTTTATTTACTTGTCCATG+TGG | - | chr6_4:16336208-16336227 | Msa0979410:intron | 25.0% |
| ! | TTTGTACAATTATGATGTCT+TGG | - | chr6_4:16336440-16336459 | Msa0979410:intron | 25.0% |
| !!! | AGTGAATTTTAAGTGTAAGT+TGG | - | chr6_4:16336815-16336834 | Msa0979410:intron | 25.0% |
| ! | TGAGCATATGAAAATTGTTT+GGG | + | chr6_4:16336885-16336904 | None:intergenic | 25.0% |
| ! | ATGAGCATATGAAAATTGTT+TGG | + | chr6_4:16336886-16336905 | None:intergenic | 25.0% |
| ! | CAAGTTATTTACTAATGCAA+AGG | + | chr6_4:16336995-16337014 | None:intergenic | 25.0% |
| ! | ATGAAATTTGACTACTTAAG+TGG | + | chr6_4:16337078-16337097 | None:intergenic | 25.0% |
| ! | ATTGTAGAGATTGAATACAT+TGG | - | chr6_4:16337096-16337115 | Msa0979410:intron | 25.0% |
| ! | CAATTTAGGAAGTAGTAATT+AGG | + | chr6_4:16337123-16337142 | None:intergenic | 25.0% |
| ! | TATCATAAGTATTTCCCATT+AGG | - | chr6_4:16337227-16337246 | Msa0979410:intron | 25.0% |
| ! | GAAAGAAAGACTAATAAAAG+GGG | + | chr6_4:16337324-16337343 | None:intergenic | 25.0% |
| ! | GGAAAGAAAGACTAATAAAA+GGG | + | chr6_4:16337325-16337344 | None:intergenic | 25.0% |
| ! | TGGAAAGAAAGACTAATAAA+AGG | + | chr6_4:16337326-16337345 | None:intergenic | 25.0% |
| ! | ATGAATGAATGAAAGAAGAT+TGG | + | chr6_4:16337352-16337371 | None:intergenic | 25.0% |
| ! | GATGAAATTCAAAATGATAG+AGG | + | chr6_4:16337426-16337445 | None:intergenic | 25.0% |
| !! | CATATTTTCCTTCTAATTTC+AGG | - | chr6_4:16337528-16337547 | Msa0979410:intron | 25.0% |
| ! | AGAGCAAAAATATGAACATT+TGG | + | chr6_4:16337665-16337684 | None:intergenic | 25.0% |
| ! | TCCTATATAATGTTAACTCT+GGG | + | chr6_4:16338035-16338054 | None:intergenic | 25.0% |
| ! | ATCCTATATAATGTTAACTC+TGG | + | chr6_4:16338036-16338055 | None:intergenic | 25.0% |
| ! | AGCTCATATAATATTGTAGA+CGG | + | chr6_4:16338185-16338204 | None:intergenic | 25.0% |
| ! | TGTATGCTAAAATTCAGTTT+AGG | - | chr6_4:16338333-16338352 | Msa0979410:intron | 25.0% |
| !! | TTTCATGTTTGATAATCATG+GGG | + | chr6_4:16338443-16338462 | None:intergenic | 25.0% |
| ! | TAAAAATGATAACCTTGTGA+CGG | - | chr6_4:16338514-16338533 | Msa0979410:intron | 25.0% |
| ! | AGTAAACGATATGATTATTG+AGG | - | chr6_4:16338608-16338627 | Msa0979410:intron | 25.0% |
| !!! | AAATCATCACTTTTTTTTGC+AGG | - | chr6_4:16338647-16338666 | Msa0979410:intron | 25.0% |
| !! | ATTTTGCCACAATTCTTATA+TGG | - | chr6_4:16338671-16338690 | Msa0979410:intron | 25.0% |
| !! | AGGGTATAAGTTTTTCTTAT+AGG | - | chr6_4:16338768-16338787 | Msa0979410:intron | 25.0% |
| !! | TAATTTTAGACTCATTGTAG+GGG | - | chr6_4:16338805-16338824 | Msa0979410:intron | 25.0% |
| ! | GATTATATCAAGAAAGTTGT+TGG | - | chr6_4:16338862-16338881 | Msa0979410:intron | 25.0% |
| !! | TTGACCAAATTTTCTTTGTA+TGG | - | chr6_4:16338942-16338961 | Msa0979410:five_prime_UTR | 25.0% |
| !! | TGACCAAATTTTCTTTGTAT+GGG | - | chr6_4:16338943-16338962 | Msa0979410:five_prime_UTR | 25.0% |
| ! | TATCCCATACAAAGAAAATT+TGG | + | chr6_4:16338949-16338968 | None:intergenic | 25.0% |
| !!! | CAGGTTTCTAAAATTAACTA+AGG | - | chr6_4:16339324-16339343 | Msa0979410:five_prime_UTR | 25.0% |
| TTCTTCTAATTCCATGGTTT+GGG | - | chr6_4:16335441-16335460 | Msa0979410:three_prime_UTR | 30.0% | |
| TTTCAAAGACTTGATTGAAG+TGG | - | chr6_4:16335472-16335491 | Msa0979410:exon | 30.0% | |
| TTCAAAGACTTGATTGAAGT+GGG | - | chr6_4:16335473-16335492 | Msa0979410:CDS | 30.0% | |
| TAGTTCTTGGTAAAAATCCT+AGG | + | chr6_4:16336036-16336055 | None:intergenic | 30.0% | |
| !! | TGTAACTTTTTGCTAGTTCT+TGG | + | chr6_4:16336049-16336068 | None:intergenic | 30.0% |
| ACCTAACATCAAATAGATTG+AGG | - | chr6_4:16336178-16336197 | Msa0979410:intron | 30.0% | |
| ACCTCAATCTATTTGATGTT+AGG | + | chr6_4:16336182-16336201 | None:intergenic | 30.0% | |
| ! | CAATTAGAAGTGCATTTCAA+AGG | + | chr6_4:16336294-16336313 | None:intergenic | 30.0% |
| ! | TAATTGTTCTTTTATTGGGG+TGG | - | chr6_4:16336308-16336327 | Msa0979410:intron | 30.0% |
| GGAGAAATCAATTCATTTCA+GGG | + | chr6_4:16336387-16336406 | None:intergenic | 30.0% | |
| AGGAGAAATCAATTCATTTC+AGG | + | chr6_4:16336388-16336407 | None:intergenic | 30.0% | |
| ! | ATGAATTGATTTCTCCTCAA+TGG | - | chr6_4:16336391-16336410 | Msa0979410:intron | 30.0% |
| TTTCATTGCTACTAAGCATA+CGG | - | chr6_4:16336510-16336529 | Msa0979410:CDS | 30.0% | |
| TTACTTCAGAATGCAACATA+TGG | - | chr6_4:16336567-16336586 | Msa0979410:intron | 30.0% | |
| TAACAAAATCTTTCCCAACT+TGG | + | chr6_4:16336650-16336669 | None:intergenic | 30.0% | |
| TTAAAGATAGAGTTTGAGCA+AGG | - | chr6_4:16337149-16337168 | Msa0979410:intron | 30.0% | |
| AAAGAATCTGGAAACCTAAT+GGG | + | chr6_4:16337244-16337263 | None:intergenic | 30.0% | |
| GCTTTATAGAACAAAGAATC+TGG | + | chr6_4:16337256-16337275 | None:intergenic | 30.0% | |
| GAATGAAAGAAGATTGGAAT+TGG | + | chr6_4:16337346-16337365 | None:intergenic | 30.0% | |
| TAGAAGGAAAATATGAACGT+TGG | + | chr6_4:16337523-16337542 | None:intergenic | 30.0% | |
| TTATGCTCTTGAATGAGATA+TGG | - | chr6_4:16337555-16337574 | Msa0979410:intron | 30.0% | |
| CATATATTTCATGCTCTTGA+AGG | - | chr6_4:16337690-16337709 | Msa0979410:intron | 30.0% | |
| ATTGGTATCAGTATATGTGT+TGG | - | chr6_4:16337791-16337810 | Msa0979410:intron | 30.0% | |
| ! | AAATACTTTTCCAAAACCCA+TGG | + | chr6_4:16337886-16337905 | None:intergenic | 30.0% |
| ACCCAGAGTTAACATTATAT+AGG | - | chr6_4:16338031-16338050 | Msa0979410:intron | 30.0% | |
| TATAATATTGTAGACGGCAA+GGG | + | chr6_4:16338179-16338198 | None:intergenic | 30.0% | |
| ATATAATATTGTAGACGGCA+AGG | + | chr6_4:16338180-16338199 | None:intergenic | 30.0% | |
| ! | AAGTCATGTTTCTGCAATAA+AGG | + | chr6_4:16338396-16338415 | None:intergenic | 30.0% |
| AAAAATGATAACCTTGTGAC+GGG | - | chr6_4:16338515-16338534 | Msa0979410:intron | 30.0% | |
| ATTGGTCCATATAAGAATTG+TGG | + | chr6_4:16338680-16338699 | None:intergenic | 30.0% | |
| CAATTCTTATATGGACCAAT+TGG | - | chr6_4:16338680-16338699 | Msa0979410:intron | 30.0% | |
| TCAAGAAAGTTGTTGGTATA+TGG | - | chr6_4:16338869-16338888 | Msa0979410:intron | 30.0% | |
| !!! | TTTATTTTAATGCCTGCAGT+TGG | - | chr6_4:16339009-16339028 | Msa0979410:intron | 30.0% |
| TAAGATCAACTCTATGTCTA+AGG | + | chr6_4:16339147-16339166 | None:intergenic | 30.0% | |
| TTATGCATTAAGTACTAGTG+TGG | - | chr6_4:16339178-16339197 | Msa0979410:intron | 30.0% | |
| ! | TTATAAAGCATTCAAGAGGA+AGG | + | chr6_4:16339224-16339243 | None:intergenic | 30.0% |
| CGAAATTTAAAGGAAATCGC+TGG | + | chr6_4:16335323-16335342 | None:intergenic | 35.0% | |
| TCGTTGCAGTCGAAATTTAA+AGG | + | chr6_4:16335333-16335352 | None:intergenic | 35.0% | |
| TTCAGACGACGATGAAATTA+GGG | + | chr6_4:16335389-16335408 | None:intergenic | 35.0% | |
| ATTCAGACGACGATGAAATT+AGG | + | chr6_4:16335390-16335409 | None:intergenic | 35.0% | |
| ACCATGGAATTAGAAGAAGA+CGG | + | chr6_4:16335439-16335458 | None:intergenic | 35.0% | |
| CTTCTTCTAATTCCATGGTT+TGG | - | chr6_4:16335440-16335459 | Msa0979410:three_prime_UTR | 35.0% | |
| TCTTCTAATTCCATGGTTTG+GGG | - | chr6_4:16335442-16335461 | Msa0979410:three_prime_UTR | 35.0% | |
| TCCAAAAACAAACGTTTCTC+CGG | + | chr6_4:16335557-16335576 | None:intergenic | 35.0% | |
| !! | TTGTTGTTGAGTTGGGAAAT+TGG | - | chr6_4:16335638-16335657 | Msa0979410:intron | 35.0% |
| !! | TGTTGTTGAGTTGGGAAATT+GGG | - | chr6_4:16335639-16335658 | Msa0979410:intron | 35.0% |
| TTTCTCAATCACTTTAGGCT+TGG | - | chr6_4:16336080-16336099 | Msa0979410:intron | 35.0% | |
| ACAAAACACTAAAAGCCACA+TGG | + | chr6_4:16336226-16336245 | None:intergenic | 35.0% | |
| TTTCTCCTCAATGGATAAGA+AGG | - | chr6_4:16336400-16336419 | Msa0979410:intron | 35.0% | |
| TAGCAATGAAACACATGACA+TGG | + | chr6_4:16336501-16336520 | None:intergenic | 35.0% | |
| TGAGAGTTATGTATGCAAGT+GGG | - | chr6_4:16336942-16336961 | Msa0979410:intron | 35.0% | |
| CAAAGAATCTGGAAACCTAA+TGG | + | chr6_4:16337245-16337264 | None:intergenic | 35.0% | |
| ! | GAATGAGATATGGTCGATTT+AGG | - | chr6_4:16337565-16337584 | Msa0979410:intron | 35.0% |
| GTGATGAAGCTAAACATAGT+AGG | + | chr6_4:16337860-16337879 | None:intergenic | 35.0% | |
| TTAATCCAAGGTGCAAACTA+AGG | + | chr6_4:16337956-16337975 | None:intergenic | 35.0% | |
| ATAATATTGTAGACGGCAAG+GGG | + | chr6_4:16338178-16338197 | None:intergenic | 35.0% | |
| AACTAAATCAACAGAACACG+AGG | + | chr6_4:16338311-16338330 | None:intergenic | 35.0% | |
| ! | TCATGTTTCTGCAATAAAGG+AGG | + | chr6_4:16338393-16338412 | None:intergenic | 35.0% |
| !! | TTAAAAGTATTCCCGTCACA+AGG | + | chr6_4:16338529-16338548 | None:intergenic | 35.0% |
| ! | CGGGAATACTTTTAACCAAA+AGG | - | chr6_4:16338534-16338553 | Msa0979410:intron | 35.0% |
| TATATGGACCAATTGGCAAT+TGG | - | chr6_4:16338687-16338706 | Msa0979410:intron | 35.0% | |
| TATCCAAACCAATTGCCAAT+TGG | + | chr6_4:16338698-16338717 | None:intergenic | 35.0% | |
| ! | TTTGAGACACAAGACAAAAG+TGG | + | chr6_4:16339094-16339113 | None:intergenic | 35.0% |
| TCCGTCTTCTTCTAATTCCA+TGG | - | chr6_4:16335435-16335454 | Msa0979410:three_prime_UTR | 40.0% | |
| AAAGCAAAATCCCCAAACCA+TGG | + | chr6_4:16335455-16335474 | None:intergenic | 40.0% | |
| !!! | GGAGAAACGTTTGTTTTTGG+AGG | - | chr6_4:16335556-16335575 | Msa0979410:CDS | 40.0% |
| !!! | GAAACGTTTGTTTTTGGAGG+CGG | - | chr6_4:16335559-16335578 | Msa0979410:CDS | 40.0% |
| ! | ACGGTTGTTGTTGTTGAGTT+GGG | - | chr6_4:16335631-16335650 | Msa0979410:intron | 40.0% |
| !! | GTTGTTGAGTTGGGAAATTG+GGG | - | chr6_4:16335640-16335659 | Msa0979410:intron | 40.0% |
| GGAAATTGGGGAAGGAAAAT+GGG | - | chr6_4:16335652-16335671 | Msa0979410:intron | 40.0% | |
| GGAAAATGGGTATATGAGTG+CGG | - | chr6_4:16335665-16335684 | Msa0979410:intron | 40.0% | |
| AATAGGACAATCAGTCACCT+AGG | - | chr6_4:16336016-16336035 | Msa0979410:intron | 40.0% | |
| ! | TGCAAAGTTCGTTTGAGACA+TGG | - | chr6_4:16336341-16336360 | Msa0979410:intron | 40.0% |
| CAATTCATTTCAGGGACTTG+TGG | + | chr6_4:16336379-16336398 | None:intergenic | 40.0% | |
| TCTCACCTTCTTATCCATTG+AGG | + | chr6_4:16336408-16336427 | None:intergenic | 40.0% | |
| TCAACATAATGCCACCAAGT+TGG | - | chr6_4:16336633-16336652 | Msa0979410:intron | 40.0% | |
| CAACATAATGCCACCAAGTT+GGG | - | chr6_4:16336634-16336653 | Msa0979410:intron | 40.0% | |
| CAAAATCTTTCCCAACTTGG+TGG | + | chr6_4:16336647-16336666 | None:intergenic | 40.0% | |
| GTGAGAGTTATGTATGCAAG+TGG | - | chr6_4:16336941-16336960 | Msa0979410:intron | 40.0% | |
| TTCATCTCGCAATCGATCTA+AGG | - | chr6_4:16337390-16337409 | Msa0979410:intron | 40.0% | |
| ! | TTTAGCTTCATCACCTTCCA+TGG | - | chr6_4:16337866-16337885 | Msa0979410:intron | 40.0% |
| TTAGCTTCATCACCTTCCAT+GGG | - | chr6_4:16337867-16337886 | Msa0979410:intron | 40.0% | |
| ! | ACTTTTCCAAAACCCATGGA+AGG | + | chr6_4:16337882-16337901 | None:intergenic | 40.0% |
| CTTAAAAATGCGCACATCGA+GGG | + | chr6_4:16337917-16337936 | None:intergenic | 40.0% | |
| !! | TCTTTCCTTAGTTTGCACCT+TGG | - | chr6_4:16337948-16337967 | Msa0979410:intron | 40.0% |
| ATGAACGCCTAGAGTTAACA+CGG | - | chr6_4:16338068-16338087 | Msa0979410:intron | 40.0% | |
| AACAGATCCGTGTTAACTCT+AGG | + | chr6_4:16338078-16338097 | None:intergenic | 40.0% | |
| TGAGCTTAAACTTCCCACAA+AGG | - | chr6_4:16338199-16338218 | Msa0979410:intron | 40.0% | |
| ! | TTGGTGCATTTTCACTTGTC+AGG | + | chr6_4:16338252-16338271 | None:intergenic | 40.0% |
| TGCAATAAAGGAGGATCATC+AGG | + | chr6_4:16338384-16338403 | None:intergenic | 40.0% | |
| ! | GAAGCAACAACTAGACCTTT+TGG | + | chr6_4:16338552-16338571 | None:intergenic | 40.0% |
| TATCCAAAGATACCAACTGC+AGG | + | chr6_4:16339024-16339043 | None:intergenic | 40.0% | |
| TGAAATTCACACACGCTAAC+AGG | - | chr6_4:16339305-16339324 | Msa0979410:five_prime_UTR | 40.0% | |
| CACAAGTCTTGAAGAATGTG+AGG | - | chr6_4:16339389-16339408 | Msa0979410:five_prime_UTR | 40.0% | |
| AGCTCATCAGTTGAGTTCAT+TGG | + | chr6_4:16339522-16339541 | None:intergenic | 40.0% | |
| !! | AGAGAAGCACTTGTATCAAG+TGG | - | chr6_4:16339547-16339566 | Msa0979410:five_prime_UTR | 40.0% |
| !! | GAGAAGCACTTGTATCAAGT+GGG | - | chr6_4:16339548-16339567 | Msa0979410:five_prime_UTR | 40.0% |
| !! | AGAAGCACTTGTATCAAGTG+GGG | - | chr6_4:16339549-16339568 | Msa0979410:five_prime_UTR | 40.0% |
| !! | AAATCGCTGGAGTTTCTGGT+CGG | + | chr6_4:16335310-16335329 | None:intergenic | 45.0% |
| AAGGAAATCGCTGGAGTTTC+TGG | + | chr6_4:16335314-16335333 | None:intergenic | 45.0% | |
| GGAATATGCTGCAATGCTAC+AGG | + | chr6_4:16335518-16335537 | None:intergenic | 45.0% | |
| !! | GCCGGAGAAACGTTTGTTTT+TGG | - | chr6_4:16335553-16335572 | Msa0979410:CDS | 45.0% |
| !!! | TTTGTTTTTGGAGGCGGAGA+AGG | - | chr6_4:16335565-16335584 | Msa0979410:CDS | 45.0% |
| ! | TTTGAGGAGGAAAGAGGTGT+TGG | - | chr6_4:16335604-16335623 | Msa0979410:intron | 45.0% |
| !! | TTGAGGAGGAAAGAGGTGTT+GGG | - | chr6_4:16335605-16335624 | Msa0979410:intron | 45.0% |
| ! | GACGGTTGTTGTTGTTGAGT+TGG | - | chr6_4:16335630-16335649 | Msa0979410:intron | 45.0% |
| !! | TTGAGTTGGGAAATTGGGGA+AGG | - | chr6_4:16335644-16335663 | Msa0979410:intron | 45.0% |
| GGGAAATTGGGGAAGGAAAA+TGG | - | chr6_4:16335651-16335670 | Msa0979410:intron | 45.0% | |
| AAATGGGTATATGAGTGCGG+CGG | - | chr6_4:16335668-16335687 | Msa0979410:intron | 45.0% | |
| TGTACACTGCATGACAAGCT+TGG | + | chr6_4:16336860-16336879 | None:intergenic | 45.0% | |
| ATTAACTCTGCCGAGAGAGA+AGG | - | chr6_4:16337047-16337066 | Msa0979410:intron | 45.0% | |
| AGTGGTACATCCTTCTCTCT+CGG | + | chr6_4:16337060-16337079 | None:intergenic | 45.0% | |
| TCGACATCAATACATGTCGC+CGG | + | chr6_4:16337721-16337740 | None:intergenic | 45.0% | |
| ATGTCGAACACTGACACATG+TGG | - | chr6_4:16337734-16337753 | Msa0979410:intron | 45.0% | |
| ! | TCATCACCTTCCATGGGTTT+TGG | - | chr6_4:16337873-16337892 | Msa0979410:intron | 45.0% |
| GCTTAAAAATGCGCACATCG+AGG | + | chr6_4:16337918-16337937 | None:intergenic | 45.0% | |
| ACAGAACACGAGGCTTACAT+AGG | + | chr6_4:16338301-16338320 | None:intergenic | 45.0% | |
| GGACCAATTGGCAATTGGTT+TGG | - | chr6_4:16338692-16338711 | Msa0979410:intron | 45.0% | |
| ! | ATGCCTGCAGTTGGTATCTT+TGG | - | chr6_4:16339018-16339037 | Msa0979410:intron | 45.0% |
| TGCCTACATTGTTGCAGTTC+AGG | - | chr6_4:16339353-16339372 | Msa0979410:five_prime_UTR | 45.0% | |
| GTCCTGAACTGCAACAATGT+AGG | + | chr6_4:16339358-16339377 | None:intergenic | 45.0% | |
| ! | ATGTGAGGTGAAGTGCTTGA+CGG | - | chr6_4:16339404-16339423 | Msa0979410:five_prime_UTR | 45.0% |
| AATCAAAGCCTGCCATCATG+AGG | + | chr6_4:16339474-16339493 | None:intergenic | 45.0% | |
| ! | CATGATGGCAGGCTTTGATT+TGG | - | chr6_4:16339474-16339493 | Msa0979410:five_prime_UTR | 45.0% |
| GATTTGGAGACTTGACTGAC+TGG | - | chr6_4:16339490-16339509 | Msa0979410:five_prime_UTR | 45.0% | |
| ! | TTTCTGGTCGGCAGTATCGT+CGG | + | chr6_4:16335298-16335317 | None:intergenic | 50.0% |
| TCCTTGACGTACGAATGTGC+CGG | - | chr6_4:16335535-16335554 | Msa0979410:CDS | 50.0% | |
| TTTGGAGGCGGAGAAGGATT+TGG | - | chr6_4:16335571-16335590 | Msa0979410:CDS | 50.0% | |
| ATTTGGTACGCCGGAGTTTG+AGG | - | chr6_4:16335588-16335607 | Msa0979410:intron | 50.0% | |
| CCTCTTTCCTCCTCAAACTC+CGG | + | chr6_4:16335601-16335620 | None:intergenic | 50.0% | |
| CAGGGACTTGTGGTGATTCT+TGG | + | chr6_4:16336369-16336388 | None:intergenic | 50.0% | |
| CGACATCAATACATGTCGCC+GGG | + | chr6_4:16337720-16337739 | None:intergenic | 50.0% | |
| AACTTCCCACAAAGGCTGCA+AGG | - | chr6_4:16338207-16338226 | Msa0979410:intron | 50.0% | |
| TCCATCCTTGCAGCCTTTGT+GGG | + | chr6_4:16338215-16338234 | None:intergenic | 50.0% | |
| TACGCACTCTCTGCCATAGA+TGG | - | chr6_4:16339444-16339463 | Msa0979410:five_prime_UTR | 50.0% | |
| CACTCTCTGCCATAGATGGA+GGG | - | chr6_4:16339448-16339467 | Msa0979410:five_prime_UTR | 50.0% | |
| ATCATGAGGCCCTCCATCTA+TGG | + | chr6_4:16339460-16339479 | None:intergenic | 50.0% | |
| ATAGATGGAGGGCCTCATGA+TGG | - | chr6_4:16339459-16339478 | Msa0979410:five_prime_UTR | 50.0% | |
| TCCGGCACATTCGTACGTCA+AGG | + | chr6_4:16335539-16335558 | None:intergenic | 55.0% | |
| ! | CGGAGAAGGATTTGGTACGC+CGG | - | chr6_4:16335579-16335598 | Msa0979410:intron | 55.0% |
| CCGGAGTTTGAGGAGGAAAG+AGG | - | chr6_4:16335598-16335617 | Msa0979410:intron | 55.0% | |
| !! | AGGAGGAAAGAGGTGTTGGG+AGG | - | chr6_4:16335608-16335627 | Msa0979410:intron | 55.0% |
| !! | GGAAAGAGGTGTTGGGAGGA+CGG | - | chr6_4:16335612-16335631 | Msa0979410:intron | 55.0% |
| ! | CATGCTCTTGAAGGTGTGCC+CGG | - | chr6_4:16337699-16337718 | Msa0979410:intron | 55.0% |
| TCCCACAAAGGCTGCAAGGA+TGG | - | chr6_4:16338211-16338230 | Msa0979410:intron | 55.0% | |
| CTCCATCCTTGCAGCCTTTG+TGG | + | chr6_4:16338216-16338235 | None:intergenic | 55.0% | |
| CAAAGGCTGCAAGGATGGAG+TGG | - | chr6_4:16338216-16338235 | Msa0979410:intron | 55.0% | |
| GCACTCTCTGCCATAGATGG+AGG | - | chr6_4:16339447-16339466 | Msa0979410:five_prime_UTR | 55.0% | |
| TGGTACGCCGGAGTTTGAGG+AGG | - | chr6_4:16335591-16335610 | Msa0979410:intron | 60.0% | |
| AGGCTGCAAGGATGGAGTGG+TGG | - | chr6_4:16338219-16338238 | Msa0979410:intron | 60.0% | |
| CTGCAAGGATGGAGTGGTGG+TGG | - | chr6_4:16338222-16338241 | Msa0979410:intron | 60.0% | |
| ATGGAGGGCCTCATGATGGC+AGG | - | chr6_4:16339463-16339482 | Msa0979410:five_prime_UTR | 60.0% | |
| CTGGTCGGCAGTATCGTCGG+TGG | + | chr6_4:16335295-16335314 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 16335285 | 16339679 | 16335285 | ID=Msa0979410;Name=Msa0979410 |
| chr6_4 | mRNA | 16335285 | 16339679 | 16335285 | ID=Msa0979410-mRNA-1;Parent=Msa0979410;Name=Msa0979410-mRNA-1;_AED=0.15;_eAED=0.15;_QI=593|0.66|0.85|1|0.33|0.42|7|188|108 |
| chr6_4 | exon | 16335285 | 16335594 | 16335285 | ID=Msa0979410-mRNA-1:exon:5244;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16336081 | 16336139 | 16336081 | ID=Msa0979410-mRNA-1:exon:5243;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16336234 | 16336295 | 16336234 | ID=Msa0979410-mRNA-1:exon:5242;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16336488 | 16336559 | 16336488 | ID=Msa0979410-mRNA-1:exon:5241;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16338543 | 16338616 | 16338543 | ID=Msa0979410-mRNA-1:exon:5240;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16338895 | 16338980 | 16338895 | ID=Msa0979410-mRNA-1:exon:5239;Parent=Msa0979410-mRNA-1 |
| chr6_4 | exon | 16339235 | 16339679 | 16339235 | ID=Msa0979410-mRNA-1:exon:5238;Parent=Msa0979410-mRNA-1 |
| chr6_4 | five_prime_UTR | 16339235 | 16339679 | 16339235 | ID=Msa0979410-mRNA-1:five_prime_utr;Parent=Msa0979410-mRNA-1 |
| chr6_4 | five_prime_UTR | 16338895 | 16338980 | 16338895 | ID=Msa0979410-mRNA-1:five_prime_utr;Parent=Msa0979410-mRNA-1 |
| chr6_4 | five_prime_UTR | 16338555 | 16338616 | 16338555 | ID=Msa0979410-mRNA-1:five_prime_utr;Parent=Msa0979410-mRNA-1 |
| chr6_4 | CDS | 16338543 | 16338554 | 16338543 | ID=Msa0979410-mRNA-1:cds;Parent=Msa0979410-mRNA-1 |
| chr6_4 | CDS | 16336488 | 16336559 | 16336488 | ID=Msa0979410-mRNA-1:cds;Parent=Msa0979410-mRNA-1 |
| chr6_4 | CDS | 16336234 | 16336295 | 16336234 | ID=Msa0979410-mRNA-1:cds;Parent=Msa0979410-mRNA-1 |
| chr6_4 | CDS | 16336081 | 16336139 | 16336081 | ID=Msa0979410-mRNA-1:cds;Parent=Msa0979410-mRNA-1 |
| chr6_4 | CDS | 16335473 | 16335594 | 16335473 | ID=Msa0979410-mRNA-1:cds;Parent=Msa0979410-mRNA-1 |
| chr6_4 | three_prime_UTR | 16335285 | 16335472 | 16335285 | ID=Msa0979410-mRNA-1:three_prime_utr;Parent=Msa0979410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
