Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846330 | XP_039689544.1 | 45.756 | 271 | 126 | 6 | 3 | 271 | 21 | 272 | 2.51e-72 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846330 | A0A396I0Y9 | 45.756 | 271 | 126 | 6 | 3 | 271 | 50 | 301 | 7.25e-72 | 233 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0846330 | 0.827481 | 1.527776e-54 | -8.615850e-47 |
| Msa0015750 | Msa0846330 | 0.842761 | 2.123076e-58 | -8.615850e-47 |
| Msa0016570 | Msa0846330 | 0.828005 | 1.143420e-54 | -8.615850e-47 |
| Msa0016580 | Msa0846330 | 0.823517 | 1.327637e-53 | -8.615850e-47 |
| Msa0062860 | Msa0846330 | 0.803601 | 3.224347e-49 | -8.615850e-47 |
| Msa0071500 | Msa0846330 | 0.801558 | 8.509675e-49 | -8.615850e-47 |
| Msa0092630 | Msa0846330 | 0.811717 | 6.089679e-51 | -8.615850e-47 |
| Msa0102070 | Msa0846330 | 0.875841 | 2.241686e-68 | -8.615850e-47 |
| Msa0110270 | Msa0846330 | 0.816119 | 6.515776e-52 | -8.615850e-47 |
| Msa0111510 | Msa0846330 | 0.819987 | 8.700478e-53 | -8.615850e-47 |
| Msa0118060 | Msa0846330 | 0.811721 | 6.077532e-51 | -8.615850e-47 |
| Msa0604350 | Msa0846330 | 0.842951 | 1.889649e-58 | -8.615850e-47 |
| Msa0636170 | Msa0846330 | 0.859114 | 5.172175e-63 | -8.615850e-47 |
| Msa0639610 | Msa0846330 | 0.840395 | 8.920704e-58 | -8.615850e-47 |
| Msa0650630 | Msa0846330 | 0.812376 | 4.373233e-51 | -8.615850e-47 |
| Msa0668260 | Msa0846330 | 0.805459 | 1.321674e-49 | -8.615850e-47 |
| Msa0678930 | Msa0846330 | 0.855651 | 5.466917e-62 | -8.615850e-47 |
| Msa0694370 | Msa0846330 | 0.839272 | 1.750007e-57 | -8.615850e-47 |
| Msa0725850 | Msa0846330 | 0.850669 | 1.462629e-60 | -8.615850e-47 |
| Msa0726140 | Msa0846330 | 0.936948 | 7.656266e-98 | -8.615850e-47 |
| Msa0729800 | Msa0846330 | 0.890222 | 1.196962e-73 | -8.615850e-47 |
| Msa0732310 | Msa0846330 | 0.815860 | 7.446554e-52 | -8.615850e-47 |
| Msa0732710 | Msa0846330 | 0.807684 | 4.481835e-50 | -8.615850e-47 |
| Msa0733290 | Msa0846330 | 0.894471 | 2.391401e-75 | -8.615850e-47 |
| Msa0741990 | Msa0846330 | 0.808772 | 2.627919e-50 | -8.615850e-47 |
| Msa0743810 | Msa0846330 | 0.902768 | 6.910893e-79 | -8.615850e-47 |
| Msa0745060 | Msa0846330 | 0.920485 | 1.205709e-87 | -8.615850e-47 |
| Msa0762360 | Msa0846330 | 0.823293 | 1.497853e-53 | -8.615850e-47 |
| Msa0763260 | Msa0846330 | 0.830581 | 2.709260e-55 | -8.615850e-47 |
| Msa0764960 | Msa0846330 | 0.817389 | 3.382663e-52 | -8.615850e-47 |
| Msa0766630 | Msa0846330 | 0.809920 | 1.490803e-50 | -8.615850e-47 |
| Msa0767720 | Msa0846330 | 0.820815 | 5.617893e-53 | -8.615850e-47 |
| Msa0768290 | Msa0846330 | 0.805114 | 1.560497e-49 | -8.615850e-47 |
| Msa0768310 | Msa0846330 | 0.815312 | 9.858607e-52 | -8.615850e-47 |
| Msa0768370 | Msa0846330 | 0.815758 | 7.847169e-52 | -8.615850e-47 |
| Msa0777870 | Msa0846330 | 0.840572 | 8.023028e-58 | -8.615850e-47 |
| Msa0783160 | Msa0846330 | 0.879230 | 1.475987e-69 | -8.615850e-47 |
| Msa0784290 | Msa0846330 | 0.835248 | 1.874356e-56 | -8.615850e-47 |
| Msa0784300 | Msa0846330 | 0.806112 | 9.634653e-50 | -8.615850e-47 |
| Msa0787600 | Msa0846330 | 0.859465 | 4.060156e-63 | -8.615850e-47 |
| Msa0789250 | Msa0846330 | 0.809830 | 1.558691e-50 | -8.615850e-47 |
| Msa0804210 | Msa0846330 | 0.802103 | 6.575830e-49 | -8.615850e-47 |
| Msa0808010 | Msa0846330 | 0.875310 | 3.408956e-68 | -8.615850e-47 |
| Msa0808020 | Msa0846330 | 0.868300 | 7.233978e-66 | -8.615850e-47 |
| Msa0811080 | Msa0846330 | 0.844983 | 5.390887e-59 | -8.615850e-47 |
| Msa0811270 | Msa0846330 | 0.822772 | 1.981020e-53 | -8.615850e-47 |
| Msa0824600 | Msa0846330 | 0.823061 | 1.696431e-53 | -8.615850e-47 |
| Msa0825860 | Msa0846330 | 0.929475 | 6.588753e-93 | -8.615850e-47 |
| Msa0833290 | Msa0846330 | 0.839156 | 1.875183e-57 | -8.615850e-47 |
| Msa0833300 | Msa0846330 | 0.816102 | 6.574718e-52 | -8.615850e-47 |
| Msa0123810 | Msa0846330 | 0.807543 | 4.802630e-50 | -8.615850e-47 |
| Msa0124100 | Msa0846330 | 0.815476 | 9.066120e-52 | -8.615850e-47 |
| Msa0131770 | Msa0846330 | 0.805212 | 1.488867e-49 | -8.615850e-47 |
| Msa0142220 | Msa0846330 | 0.855304 | 6.902872e-62 | -8.615850e-47 |
| Msa0145750 | Msa0846330 | 0.871409 | 6.984374e-67 | -8.615850e-47 |
| Msa0153910 | Msa0846330 | 0.828754 | 7.541522e-55 | -8.615850e-47 |
| Msa0188460 | Msa0846330 | 0.807057 | 6.086145e-50 | -8.615850e-47 |
| Msa0192970 | Msa0846330 | 0.811349 | 7.320145e-51 | -8.615850e-47 |
| Msa0197010 | Msa0846330 | 0.804902 | 1.727990e-49 | -8.615850e-47 |
| Msa0199240 | Msa0846330 | 0.813751 | 2.184513e-51 | -8.615850e-47 |
| Msa0200000 | Msa0846330 | 0.866015 | 3.882546e-65 | -8.615850e-47 |
| Msa0227480 | Msa0846330 | 0.869794 | 2.370846e-66 | -8.615850e-47 |
| Msa0232850 | Msa0846330 | 0.889626 | 2.046302e-73 | -8.615850e-47 |
| Msa0235140 | Msa0846330 | 0.814101 | 1.828733e-51 | -8.615850e-47 |
| Msa0365500 | Msa0846330 | 0.865115 | 7.462759e-65 | -8.615850e-47 |
| Msa0366580 | Msa0846330 | 0.846403 | 2.220428e-59 | -8.615850e-47 |
| Msa0384800 | Msa0846330 | 0.885450 | 8.048043e-72 | -8.615850e-47 |
| Msa0384890 | Msa0846330 | 0.821912 | 3.137795e-53 | -8.615850e-47 |
| Msa0390070 | Msa0846330 | 0.803196 | 3.911627e-49 | -8.615850e-47 |
| Msa0394970 | Msa0846330 | 0.834356 | 3.143066e-56 | -8.615850e-47 |
| Msa0396600 | Msa0846330 | 0.810729 | 9.973105e-51 | -8.615850e-47 |
| Msa0406120 | Msa0846330 | 0.865056 | 7.786746e-65 | -8.615850e-47 |
| Msa0406280 | Msa0846330 | 0.803729 | 3.033410e-49 | -8.615850e-47 |
| Msa0407750 | Msa0846330 | 0.818735 | 1.678642e-52 | -8.615850e-47 |
| Msa0414410 | Msa0846330 | 0.857007 | 2.188576e-62 | -8.615850e-47 |
| Msa0414420 | Msa0846330 | 0.892197 | 1.980921e-74 | -8.615850e-47 |
| Msa0435230 | Msa0846330 | 0.818460 | 1.937776e-52 | -8.615850e-47 |
| Msa0436780 | Msa0846330 | 0.836912 | 7.085735e-57 | -8.615850e-47 |
| Msa0436800 | Msa0846330 | 0.830451 | 2.915922e-55 | -8.615850e-47 |
| Msa0438620 | Msa0846330 | 0.854931 | 8.857433e-62 | -8.615850e-47 |
| Msa0450000 | Msa0846330 | 0.873329 | 1.599727e-67 | -8.615850e-47 |
| Msa0450570 | Msa0846330 | 0.824234 | 9.014600e-54 | -8.615850e-47 |
| Msa0451730 | Msa0846330 | 0.827590 | 1.438320e-54 | -8.615850e-47 |
| Msa0452900 | Msa0846330 | 0.913254 | 7.610066e-84 | -8.615850e-47 |
| Msa0452910 | Msa0846330 | 0.803676 | 3.112126e-49 | -8.615850e-47 |
| Msa0453120 | Msa0846330 | 0.853219 | 2.762265e-61 | -8.615850e-47 |
| Msa0454370 | Msa0846330 | 0.823609 | 1.262981e-53 | -8.615850e-47 |
| Msa0454910 | Msa0846330 | 0.836900 | 7.136001e-57 | -8.615850e-47 |
| Msa0459160 | Msa0846330 | 0.827431 | 1.570825e-54 | -8.615850e-47 |
| Msa0459170 | Msa0846330 | 0.828638 | 8.045154e-55 | -8.615850e-47 |
| Msa0479340 | Msa0846330 | 0.811266 | 7.628984e-51 | -8.615850e-47 |
| Msa0482620 | Msa0846330 | 0.845697 | 3.455215e-59 | -8.615850e-47 |
| Msa0251320 | Msa0846330 | 0.817173 | 3.781965e-52 | -8.615850e-47 |
| Msa0256440 | Msa0846330 | 0.814836 | 1.257937e-51 | -8.615850e-47 |
| Msa0267000 | Msa0846330 | 0.887120 | 1.886240e-72 | -8.615850e-47 |
| Msa0267010 | Msa0846330 | 0.890925 | 6.336320e-74 | -8.615850e-47 |
| Msa0270520 | Msa0846330 | 0.820377 | 7.083700e-53 | -8.615850e-47 |
| Msa0273100 | Msa0846330 | 0.809967 | 1.456282e-50 | -8.615850e-47 |
| Msa0282310 | Msa0846330 | 0.824768 | 6.748864e-54 | -8.615850e-47 |
| Msa0285810 | Msa0846330 | 0.826678 | 2.377800e-54 | -8.615850e-47 |
| Msa0290870 | Msa0846330 | 0.810383 | 1.184605e-50 | -8.615850e-47 |
| Msa0295770 | Msa0846330 | 0.833463 | 5.255580e-56 | -8.615850e-47 |
| Msa0304170 | Msa0846330 | 0.827858 | 1.240054e-54 | -8.615850e-47 |
| Msa0306460 | Msa0846330 | 0.829678 | 4.499647e-55 | -8.615850e-47 |
| Msa0311750 | Msa0846330 | 0.802282 | 6.040608e-49 | -8.615850e-47 |
| Msa0313760 | Msa0846330 | 0.828263 | 9.907220e-55 | -8.615850e-47 |
| Msa0329190 | Msa0846330 | 0.805335 | 1.402842e-49 | -8.615850e-47 |
| Msa0342240 | Msa0846330 | 0.900714 | 5.553558e-78 | -8.615850e-47 |
| Msa0353190 | Msa0846330 | 0.805916 | 1.059486e-49 | -8.615850e-47 |
| Msa0360510 | Msa0846330 | 0.850076 | 2.145059e-60 | -8.615850e-47 |
| Msa0363300 | Msa0846330 | 0.866368 | 3.001909e-65 | -8.615850e-47 |
| Msa0363750 | Msa0846330 | 0.825297 | 5.062494e-54 | -8.615850e-47 |
| Msa0485030 | Msa0846330 | 0.843929 | 1.035341e-58 | -8.615850e-47 |
| Msa0491590 | Msa0846330 | 0.881849 | 1.704452e-70 | -8.615850e-47 |
| Msa0502760 | Msa0846330 | 0.823772 | 1.157182e-53 | -8.615850e-47 |
| Msa0506270 | Msa0846330 | 0.842212 | 2.968734e-58 | -8.615850e-47 |
| Msa0534540 | Msa0846330 | 0.822890 | 1.859857e-53 | -8.615850e-47 |
| Msa0548060 | Msa0846330 | 0.801697 | 7.968281e-49 | -8.615850e-47 |
| Msa0564890 | Msa0846330 | 0.873723 | 1.178703e-67 | -8.615850e-47 |
| Msa0596150 | Msa0846330 | 0.851492 | 8.566511e-61 | -8.615850e-47 |
| Msa0845930 | Msa0846330 | 0.839630 | 1.412912e-57 | -8.615850e-47 |
| Msa0846210 | Msa0846330 | 0.823118 | 1.645157e-53 | -8.615850e-47 |
| Msa0846330 | Msa0846350 | 0.974842 | 7.121688e-139 | -8.615850e-47 |
| Msa0846330 | Msa0848060 | 0.800467 | 1.421818e-48 | -8.615850e-47 |
| Msa0846330 | Msa0848960 | 0.849380 | 3.356378e-60 | -8.615850e-47 |
| Msa0846330 | Msa0854980 | 0.812839 | 3.464010e-51 | -8.615850e-47 |
| Msa0846330 | Msa0858980 | 0.854843 | 9.396049e-62 | -8.615850e-47 |
| Msa0846330 | Msa0865320 | 0.906724 | 1.092183e-80 | -8.615850e-47 |
| Msa0846330 | Msa0872230 | 0.837579 | 4.781543e-57 | -8.615850e-47 |
| Msa0846330 | Msa0885280 | 0.819057 | 1.417901e-52 | -8.615850e-47 |
| Msa0846330 | Msa0885290 | 0.849175 | 3.826665e-60 | -8.615850e-47 |
| Msa0846330 | Msa0888370 | 0.872656 | 2.689493e-67 | -8.615850e-47 |
| Msa0846330 | Msa0888420 | 0.831600 | 1.522945e-55 | -8.615850e-47 |
| Msa0846330 | Msa0896080 | 0.835398 | 1.717671e-56 | -8.615850e-47 |
| Msa0846330 | Msa0898080 | 0.805288 | 1.435151e-49 | -8.615850e-47 |
| Msa0846330 | Msa0899430 | 0.805751 | 1.147680e-49 | -8.615850e-47 |
| Msa0846330 | Msa0899450 | 0.817097 | 3.934296e-52 | -8.615850e-47 |
| Msa0846330 | Msa0907260 | 0.804124 | 2.510640e-49 | -8.615850e-47 |
| Msa0846330 | Msa0917600 | 0.801787 | 7.637588e-49 | -8.615850e-47 |
| Msa0846330 | Msa0922720 | 0.803810 | 2.918582e-49 | -8.615850e-47 |
| Msa0846330 | Msa0952350 | 0.831388 | 1.717461e-55 | -8.615850e-47 |
| Msa0846330 | Msa0952720 | 0.816620 | 5.035435e-52 | -8.615850e-47 |
| Msa0846330 | Msa0954910 | 0.823518 | 1.326509e-53 | -8.615850e-47 |
| Msa0846330 | Msa0956270 | 0.806212 | 9.180505e-50 | -8.615850e-47 |
| Msa0846330 | Msa0957680 | 0.828967 | 6.696127e-55 | -8.615850e-47 |
| Msa0846330 | Msa0957860 | 0.841763 | 3.901412e-58 | -8.615850e-47 |
| Msa0846330 | Msa0957960 | 0.842700 | 2.203110e-58 | -8.615850e-47 |
| Msa0846330 | Msa0958550 | 0.812616 | 3.875750e-51 | -8.615850e-47 |
| Msa0846330 | Msa0969260 | 0.824608 | 7.360019e-54 | -8.615850e-47 |
| Msa0846330 | Msa0969450 | 0.806221 | 9.140485e-50 | -8.615850e-47 |
| Msa0846330 | Msa0974870 | 0.828936 | 6.813485e-55 | -8.615850e-47 |
| Msa0846330 | Msa0979410 | 0.821686 | 3.539121e-53 | -8.615850e-47 |
| Msa0846330 | Msa0979850 | 0.801486 | 8.800853e-49 | -8.615850e-47 |
| Msa0846330 | Msa0981270 | 0.814952 | 1.185519e-51 | -8.615850e-47 |
| Msa0846330 | Msa0981370 | 0.876042 | 1.911234e-68 | -8.615850e-47 |
| Msa0846330 | Msa0986360 | 0.813379 | 2.636679e-51 | -8.615850e-47 |
| Msa0846330 | Msa0989060 | 0.865895 | 4.237605e-65 | -8.615850e-47 |
| Msa0846330 | Msa0991820 | 0.825025 | 5.867874e-54 | -8.615850e-47 |
| Msa0846330 | Msa0998690 | 0.808125 | 3.610776e-50 | -8.615850e-47 |
| Msa0846330 | Msa1016280 | 0.913201 | 8.097262e-84 | -8.615850e-47 |
| Msa0846330 | Msa1024240 | 0.856382 | 3.341779e-62 | -8.615850e-47 |
| Msa0846330 | Msa1025360 | 0.895192 | 1.210558e-75 | -8.615850e-47 |
| Msa0846330 | Msa1025370 | 0.895863 | 6.391864e-76 | -8.615850e-47 |
| Msa0846330 | Msa1028230 | 0.801909 | 7.207906e-49 | -8.615850e-47 |
| Msa0846330 | Msa1030060 | 0.825100 | 5.633651e-54 | -8.615850e-47 |
| Msa0846330 | Msa1037200 | 0.830902 | 2.260397e-55 | -8.615850e-47 |
| Msa0846330 | Msa1044830 | 0.891690 | 3.154351e-74 | -8.615850e-47 |
| Msa0846330 | Msa1044840 | 0.897174 | 1.815649e-76 | -8.615850e-47 |
| Msa0846330 | Msa1060840 | 0.857937 | 1.160892e-62 | -8.615850e-47 |
| Msa0846330 | Msa1062810 | 0.823027 | 1.727857e-53 | -8.615850e-47 |
| Msa0846330 | Msa1065570 | 0.827962 | 1.170494e-54 | -8.615850e-47 |
| Msa0846330 | Msa1068420 | 0.831263 | 1.843528e-55 | -8.615850e-47 |
| Msa0846330 | Msa1077460 | 0.826905 | 2.099021e-54 | -8.615850e-47 |
| Msa0846330 | Msa1092990 | 0.913359 | 6.743562e-84 | -8.615850e-47 |
| Msa0846330 | Msa1096580 | 0.813797 | 2.133512e-51 | -8.615850e-47 |
| Msa0846330 | Msa1100980 | 0.890831 | 6.899553e-74 | -8.615850e-47 |
| Msa0846330 | Msa1109440 | 0.873935 | 9.999905e-68 | -8.615850e-47 |
| Msa0846330 | Msa1112300 | 0.826387 | 2.789292e-54 | -8.615850e-47 |
| Msa0846330 | Msa1114030 | 0.809736 | 1.632486e-50 | -8.615850e-47 |
| Msa0846330 | Msa1117150 | 0.803819 | 2.906430e-49 | -8.615850e-47 |
| Msa0846330 | Msa1121200 | 0.890052 | 1.395243e-73 | -8.615850e-47 |
| Msa0846330 | Msa1121490 | 0.813647 | 2.302750e-51 | -8.615850e-47 |
| Msa0846330 | Msa1123420 | 0.816936 | 4.276543e-52 | -8.615850e-47 |
| Msa0846330 | Msa1135740 | 0.881167 | 3.005585e-70 | -8.615850e-47 |
| Msa0846330 | Msa1136090 | 0.877863 | 4.465235e-69 | -8.615850e-47 |
| Msa0846330 | Msa1137690 | 0.806248 | 9.021118e-50 | -8.615850e-47 |
| Msa0846330 | Msa1146110 | 0.883827 | 3.227536e-71 | -8.615850e-47 |
| Msa0846330 | Msa1149360 | 0.829093 | 6.243018e-55 | -8.615850e-47 |
| Msa0846330 | Msa1150370 | 0.834846 | 2.365994e-56 | -8.615850e-47 |
| Msa0846330 | Msa1160670 | 0.808752 | 2.653687e-50 | -8.615850e-47 |
| Msa0846330 | Msa1164120 | 0.815744 | 7.903723e-52 | -8.615850e-47 |
| Msa0846330 | Msa1173920 | 0.840198 | 1.004874e-57 | -8.615850e-47 |
| Msa0846330 | Msa1178340 | 0.821648 | 3.610213e-53 | -8.615850e-47 |
| Msa0846330 | Msa1184420 | 0.805526 | 1.279387e-49 | -8.615850e-47 |
| Msa0846330 | Msa1187940 | 0.887954 | 9.055750e-73 | -8.615850e-47 |
| Msa0846330 | Msa1187950 | 0.861749 | 8.245650e-64 | -8.615850e-47 |
| Msa0846330 | Msa1192640 | 0.875811 | 2.296274e-68 | -8.615850e-47 |
| Msa0846330 | Msa1193730 | 0.830539 | 2.773967e-55 | -8.615850e-47 |
| Msa0846330 | Msa1246880 | 0.847884 | 8.714729e-60 | -8.615850e-47 |
| Msa0846330 | Msa1248310 | 0.810737 | 9.930736e-51 | -8.615850e-47 |
| Msa0846330 | Msa1251910 | 0.800537 | 1.375962e-48 | -8.615850e-47 |
| Msa0846330 | Msa1260100 | 0.847366 | 1.210081e-59 | -8.615850e-47 |
| Msa0846330 | Msa1269670 | 0.914823 | 1.218595e-84 | -8.615850e-47 |
| Msa0846330 | Msa1270230 | 0.891207 | 4.901426e-74 | -8.615850e-47 |
| Msa0846330 | Msa1270240 | 0.868304 | 7.212413e-66 | -8.615850e-47 |
| Msa0846330 | Msa1270270 | 0.895268 | 1.126179e-75 | -8.615850e-47 |
| Msa0846330 | Msa1273230 | 0.812712 | 3.692499e-51 | -8.615850e-47 |
| Msa0846330 | Msa1283330 | 0.896030 | 5.451640e-76 | -8.615850e-47 |
| Msa0846330 | Msa1284680 | 0.810011 | 1.424633e-50 | -8.615850e-47 |
| Msa0846330 | Msa1285930 | 0.885365 | 8.658777e-72 | -8.615850e-47 |
| Msa0846330 | Msa1287800 | 0.896676 | 2.933935e-76 | -8.615850e-47 |
| Msa0846330 | Msa1287810 | 0.900482 | 7.007375e-78 | -8.615850e-47 |
| Msa0846330 | Msa1287820 | 0.804445 | 2.153099e-49 | -8.615850e-47 |
| Msa0846330 | Msa1287830 | 0.833768 | 4.410549e-56 | -8.615850e-47 |
| Msa0846330 | Msa1288560 | 0.806410 | 8.339275e-50 | -8.615850e-47 |
| Msa0846330 | Msa1289420 | 0.841684 | 4.092350e-58 | -8.615850e-47 |
| Msa0846330 | Msa1289430 | 0.864835 | 9.133661e-65 | -8.615850e-47 |
| Msa0846330 | Msa1297210 | 0.857669 | 1.393994e-62 | -8.615850e-47 |
| Msa0846330 | Msa1305480 | 0.851141 | 1.076946e-60 | -8.615850e-47 |
| Msa0846330 | Msa1307890 | 0.854839 | 9.420407e-62 | -8.615850e-47 |
| Msa0846330 | Msa1313980 | 0.822641 | 2.124945e-53 | -8.615850e-47 |
| Msa0846330 | Msa1314280 | 0.802534 | 5.360482e-49 | -8.615850e-47 |
| Msa0846330 | Msa1320300 | 0.887190 | 1.774090e-72 | -8.615850e-47 |
| Msa0846330 | Msa1321560 | 0.842582 | 2.367858e-58 | -8.615850e-47 |
| Msa0846330 | Msa1340590 | 0.889422 | 2.457479e-73 | -8.615850e-47 |
| Msa0846330 | Msa1342200 | 0.858741 | 6.691015e-63 | -8.615850e-47 |
| Msa0846330 | Msa1369430 | 0.854637 | 1.078210e-61 | -8.615850e-47 |
| Msa0846330 | Msa1381530 | 0.800205 | 1.607766e-48 | -8.615850e-47 |
| Msa0846330 | Msa1382690 | 0.801924 | 7.155456e-49 | -8.615850e-47 |
| Msa0846330 | Msa1382700 | 0.801622 | 8.254062e-49 | -8.615850e-47 |
| Msa0846330 | Msa1386330 | 0.835025 | 2.132911e-56 | -8.615850e-47 |
| Msa0846330 | Msa1397150 | 0.810667 | 1.028316e-50 | -8.615850e-47 |
| Msa0846330 | Msa1397580 | 0.883669 | 3.689370e-71 | -8.615850e-47 |
| Msa0846330 | Msa1402790 | 0.815122 | 1.086585e-51 | -8.615850e-47 |
| Msa0846330 | Msa1404000 | 0.929983 | 3.170900e-93 | -8.615850e-47 |
| Msa0846330 | Msa1408780 | 0.824348 | 8.475235e-54 | -8.615850e-47 |
| Msa0846330 | Msa1415310 | 0.898172 | 6.879853e-77 | -8.615850e-47 |
| Msa0846330 | Msa1422180 | 0.868727 | 5.264400e-66 | -8.615850e-47 |
| Msa0846330 | Msa1433120 | 0.878509 | 2.652348e-69 | -8.615850e-47 |
| Msa0846330 | Msa1451190 | 0.800959 | 1.128235e-48 | -8.615850e-47 |
| Msa0846330 | Msa1451570 | 0.810796 | 9.643648e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846330 | MtrunA17_Chr4g0002051 | 45.756 | 271 | 126 | 6 | 3 | 271 | 50 | 301 | 1.40e-75 | 233 |
| Msa0846330 | MtrunA17_Chr8g0381471 | 47.059 | 170 | 75 | 4 | 104 | 271 | 1 | 157 | 2.26e-45 | 151 |
| Msa0846330 | MtrunA17_Chr2g0287671 | 30.389 | 283 | 166 | 11 | 3 | 265 | 137 | 408 | 2.05e-25 | 104 |
| Msa0846330 | MtrunA17_Chr8g0361701 | 28.313 | 166 | 90 | 6 | 93 | 253 | 111 | 252 | 2.03e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTGGCAGTTTACATATT+TGG | 0.149377 | 5_4:-26226021 | Msa0846330:CDS |
| GGGTTATCGAAAGCGATTTA+TGG | 0.217435 | 5_4:-26225447 | Msa0846330:CDS |
| AACCAATATTTAGGATAAAA+TGG | 0.269706 | 5_4:+26225617 | None:intergenic |
| GGTGGTTTCAAATCAACTTA+TGG | 0.292463 | 5_4:-26225031 | Msa0846330:CDS |
| ATTGTTTCAGGTAATTGATT+TGG | 0.299049 | 5_4:-26225678 | Msa0846330:intron |
| TAGGAATGATTGTGCGATTT+GGG | 0.304560 | 5_4:-26224839 | Msa0846330:CDS |
| TTTCATGGAAAACTTGTTGA+TGG | 0.314872 | 5_4:-26225071 | Msa0846330:CDS |
| ATCAAATGGATGATGGAAAA+AGG | 0.314997 | 5_4:-26224814 | Msa0846330:CDS |
| GTCGGAATAAACCAATATTT+AGG | 0.320561 | 5_4:+26225608 | None:intergenic |
| CTTGATACTTGTCTTCCTCT+TGG | 0.328648 | 5_4:+26225191 | None:intergenic |
| TTAGGAATGATTGTGCGATT+TGG | 0.345924 | 5_4:-26224840 | Msa0846330:intron |
| GAAGACAAGTATCAAGAAAA+TGG | 0.346177 | 5_4:-26225184 | Msa0846330:intron |
| GGTTATCGAAAGCGATTTAT+GGG | 0.356200 | 5_4:-26225446 | Msa0846330:CDS |
| TGACATCGGCAGAAAGGAAT+TGG | 0.366356 | 5_4:-26225250 | Msa0846330:CDS |
| TTGATACTTGTCTTCCTCTT+GGG | 0.380492 | 5_4:+26225192 | None:intergenic |
| GGATTTGATCTTGCGGAATT+CGG | 0.384621 | 5_4:-26224615 | Msa0846330:CDS |
| ATCATCGTCAATAAATTTGT+TGG | 0.391722 | 5_4:+26225787 | None:intergenic |
| GTTTATTCCGACCACATTAT+CGG | 0.391757 | 5_4:-26225597 | Msa0846330:intron |
| TCATCGTCAATAAATTTGTT+GGG | 0.434932 | 5_4:+26225788 | None:intergenic |
| AAATGATGAAGAATCTAATC+TGG | 0.436512 | 5_4:-26226037 | Msa0846330:CDS |
| TTAGCAACTCGTGTTGGCAT+TGG | 0.451963 | 5_4:-26225495 | Msa0846330:intron |
| GTGCGATTTGGGTAATCAAA+TGG | 0.465432 | 5_4:-26224828 | Msa0846330:CDS |
| ACAGAGATAGATTACGTTGA+AGG | 0.486255 | 5_4:-26225839 | Msa0846330:CDS |
| ATGGATCCCTCTTTCTATGT+GGG | 0.495254 | 5_4:-26225052 | Msa0846330:CDS |
| TTTGTTGCTCCACGTGGTTA+CGG | 0.500598 | 5_4:-26224986 | Msa0846330:CDS |
| GATGGATCCCTCTTTCTATG+TGG | 0.506410 | 5_4:-26225053 | Msa0846330:CDS |
| AGGAACTAGGAAGTTGCTGC+AGG | 0.508385 | 5_4:-26225819 | Msa0846330:CDS |
| TTGGGTAATCAAATGGATGA+TGG | 0.515751 | 5_4:-26224821 | Msa0846330:CDS |
| CATAATTGACATCGGCAGAA+AGG | 0.522205 | 5_4:-26225256 | Msa0846330:CDS |
| GATCCCTCTTTCTATGTGGG+TGG | 0.525374 | 5_4:-26225049 | Msa0846330:CDS |
| GAAACCACCCACATAGAAAG+AGG | 0.536877 | 5_4:+26225045 | None:intergenic |
| TAGATTACGTTGAAGGAACT+AGG | 0.550308 | 5_4:-26225832 | Msa0846330:CDS |
| GAGTGCTGAGTTTATTTCAA+AGG | 0.557552 | 5_4:-26225420 | Msa0846330:CDS |
| TCTTAATTGTTGTAGGCAAG+AGG | 0.559172 | 5_4:-26225873 | Msa0846330:intron |
| TTACACTAACAGGTGGATGA+AGG | 0.560129 | 5_4:-26224692 | Msa0846330:intron |
| CCACGTGGTTACGGAAGTCA+AGG | 0.569221 | 5_4:-26224977 | Msa0846330:CDS |
| ATCGAAAGCGATTTATGGGG+GGG | 0.572674 | 5_4:-26225442 | Msa0846330:CDS |
| TGCCGATGTCAATTATGAGA+AGG | 0.572917 | 5_4:+26225262 | None:intergenic |
| AAATGAACGGTATCATGTAT+CGG | 0.587109 | 5_4:+26225288 | None:intergenic |
| TTAATAATTTACCGATAATG+TGG | 0.589365 | 5_4:+26225586 | None:intergenic |
| ATTTATTTAGCAACTCGTGT+TGG | 0.592550 | 5_4:-26225501 | Msa0846330:intron |
| TTATCGAAAGCGATTTATGG+GGG | 0.592691 | 5_4:-26225444 | Msa0846330:CDS |
| TAATTTACCGATAATGTGGT+CGG | 0.599623 | 5_4:+26225590 | None:intergenic |
| TTCCTTCTCATAATTGACAT+CGG | 0.605577 | 5_4:-26225264 | Msa0846330:CDS |
| TATCGAAAGCGATTTATGGG+GGG | 0.620517 | 5_4:-26225443 | Msa0846330:CDS |
| AAAAGAGGGATTTGATCTTG+CGG | 0.622365 | 5_4:-26224622 | Msa0846330:CDS |
| GGAACTAGGAAGTTGCTGCA+GGG | 0.630697 | 5_4:-26225818 | Msa0846330:CDS |
| GTTATCGAAAGCGATTTATG+GGG | 0.643499 | 5_4:-26225445 | Msa0846330:CDS |
| TTCATCATTTAACTTCAGTG+TGG | 0.647375 | 5_4:+26226050 | None:intergenic |
| TTTAAGTTTGTTGCTCCACG+TGG | 0.650344 | 5_4:-26224992 | Msa0846330:CDS |
| GTTCGTCAGCTCTTCCCAAG+AGG | 0.652918 | 5_4:-26225206 | Msa0846330:CDS |
| AAACCACCCACATAGAAAGA+GGG | 0.662397 | 5_4:+26225046 | None:intergenic |
| TATGAGAAGGAACAAATGAA+CGG | 0.662634 | 5_4:+26225275 | None:intergenic |
| CCTTGACTTCCGTAACCACG+TGG | 0.696038 | 5_4:+26224977 | None:intergenic |
| CACGTGGTTACGGAAGTCAA+GGG | 0.703622 | 5_4:-26224976 | Msa0846330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTCATAATTTTTTATTT+AGG | - | chr5_4:26225837-26225856 | Msa0846330:CDS | 10.0% |
| !!! | ATACTCATAATTTTTTATTT+AGG | - | chr5_4:26225837-26225856 | Msa0846330:CDS | 10.0% |
| !! | TAATTAATCTTAATTGTTGT+AGG | - | chr5_4:26224815-26224834 | Msa0846330:CDS | 15.0% |
| !! | TAATTAATCTTAATTGTTGT+AGG | - | chr5_4:26224815-26224834 | Msa0846330:CDS | 15.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | - | chr5_4:26225005-26225024 | Msa0846330:CDS | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | + | chr5_4:26225081-26225100 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | + | chr5_4:26225112-26225131 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | + | chr5_4:26225745-26225764 | None:intergenic | 20.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | - | chr5_4:26225005-26225024 | Msa0846330:CDS | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | + | chr5_4:26225081-26225100 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | + | chr5_4:26225112-26225131 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | + | chr5_4:26225745-26225764 | None:intergenic | 20.0% |
| ! | AAATGATGAAGAATCTAATC+TGG | - | chr5_4:26224658-26224677 | Msa0846330:CDS | 25.0% |
| !!! | CAGCTTTTTGATTATATTGA+TGG | + | chr5_4:26224700-26224719 | None:intergenic | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | + | chr5_4:26224910-26224929 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | + | chr5_4:26224911-26224930 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | - | chr5_4:26225017-26225036 | Msa0846330:CDS | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | - | chr5_4:26225076-26225095 | Msa0846330:CDS | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | - | chr5_4:26225227-26225246 | Msa0846330:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | - | chr5_4:26225228-26225247 | Msa0846330:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | + | chr5_4:26225334-26225353 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | + | chr5_4:26225335-26225354 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | - | chr5_4:26225609-26225628 | Msa0846330:CDS | 25.0% |
| !! | AAATCCCTCTTTTTATTGTA+AGG | + | chr5_4:26226066-26226085 | None:intergenic | 25.0% |
| ! | AAATGATGAAGAATCTAATC+TGG | - | chr5_4:26224658-26224677 | Msa0846330:CDS | 25.0% |
| !!! | CAGCTTTTTGATTATATTGA+TGG | + | chr5_4:26224700-26224719 | None:intergenic | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | + | chr5_4:26224910-26224929 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | + | chr5_4:26224911-26224930 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | - | chr5_4:26225017-26225036 | Msa0846330:CDS | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | - | chr5_4:26225076-26225095 | Msa0846330:CDS | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | - | chr5_4:26225227-26225246 | Msa0846330:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | - | chr5_4:26225228-26225247 | Msa0846330:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | + | chr5_4:26225334-26225353 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | + | chr5_4:26225335-26225354 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | - | chr5_4:26225609-26225628 | Msa0846330:CDS | 25.0% |
| !! | AAATCCCTCTTTTTATTGTA+AGG | + | chr5_4:26226066-26226085 | None:intergenic | 25.0% |
| !! | TTTAACTTCAGTGTGGTTTT+AGG | + | chr5_4:26224641-26224660 | None:intergenic | 30.0% |
| ! | TTCATCATTTAACTTCAGTG+TGG | + | chr5_4:26224648-26224667 | None:intergenic | 30.0% |
| AATCTGGCAGTTTACATATT+TGG | - | chr5_4:26224674-26224693 | Msa0846330:CDS | 30.0% | |
| GTCGGAATAAACCAATATTT+AGG | + | chr5_4:26225090-26225109 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | + | chr5_4:26225108-26225127 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | - | chr5_4:26225194-26225213 | Msa0846330:CDS | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | + | chr5_4:26225231-26225250 | None:intergenic | 30.0% |
| TCGGCACAAAAAAAATGTAT+CGG | + | chr5_4:26225391-26225410 | None:intergenic | 30.0% | |
| AAATGAACGGTATCATGTAT+CGG | + | chr5_4:26225410-26225429 | None:intergenic | 30.0% | |
| TATGAGAAGGAACAAATGAA+CGG | + | chr5_4:26225423-26225442 | None:intergenic | 30.0% | |
| TTCCTTCTCATAATTGACAT+CGG | - | chr5_4:26225431-26225450 | Msa0846330:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | - | chr5_4:26225511-26225530 | Msa0846330:intron | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | - | chr5_4:26225624-26225643 | Msa0846330:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | - | chr5_4:26225881-26225900 | Msa0846330:intron | 30.0% |
| TTTACCACAATTACACTAAC+AGG | - | chr5_4:26225993-26226012 | Msa0846330:intron | 30.0% | |
| TGCATCCTTACAATAAAAAG+AGG | - | chr5_4:26226058-26226077 | Msa0846330:CDS | 30.0% | |
| GCATCCTTACAATAAAAAGA+GGG | - | chr5_4:26226059-26226078 | Msa0846330:CDS | 30.0% | |
| !! | TTTAACTTCAGTGTGGTTTT+AGG | + | chr5_4:26224641-26224660 | None:intergenic | 30.0% |
| ! | TTCATCATTTAACTTCAGTG+TGG | + | chr5_4:26224648-26224667 | None:intergenic | 30.0% |
| AATCTGGCAGTTTACATATT+TGG | - | chr5_4:26224674-26224693 | Msa0846330:CDS | 30.0% | |
| GTCGGAATAAACCAATATTT+AGG | + | chr5_4:26225090-26225109 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | + | chr5_4:26225108-26225127 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | - | chr5_4:26225194-26225213 | Msa0846330:CDS | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | + | chr5_4:26225231-26225250 | None:intergenic | 30.0% |
| TCGGCACAAAAAAAATGTAT+CGG | + | chr5_4:26225391-26225410 | None:intergenic | 30.0% | |
| AAATGAACGGTATCATGTAT+CGG | + | chr5_4:26225410-26225429 | None:intergenic | 30.0% | |
| TATGAGAAGGAACAAATGAA+CGG | + | chr5_4:26225423-26225442 | None:intergenic | 30.0% | |
| TTCCTTCTCATAATTGACAT+CGG | - | chr5_4:26225431-26225450 | Msa0846330:CDS | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | - | chr5_4:26225511-26225530 | Msa0846330:intron | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | - | chr5_4:26225624-26225643 | Msa0846330:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | - | chr5_4:26225881-26225900 | Msa0846330:intron | 30.0% |
| TTTACCACAATTACACTAAC+AGG | - | chr5_4:26225993-26226012 | Msa0846330:intron | 30.0% | |
| TGCATCCTTACAATAAAAAG+AGG | - | chr5_4:26226058-26226077 | Msa0846330:CDS | 30.0% | |
| GCATCCTTACAATAAAAAGA+GGG | - | chr5_4:26226059-26226078 | Msa0846330:CDS | 30.0% | |
| TCTTAATTGTTGTAGGCAAG+AGG | - | chr5_4:26224822-26224841 | Msa0846330:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | - | chr5_4:26224856-26224875 | Msa0846330:intron | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | - | chr5_4:26224863-26224882 | Msa0846330:intron | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | - | chr5_4:26225098-26225117 | Msa0846330:intron | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | - | chr5_4:26225249-26225268 | Msa0846330:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | - | chr5_4:26225250-26225269 | Msa0846330:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | - | chr5_4:26225251-26225270 | Msa0846330:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | - | chr5_4:26225275-26225294 | Msa0846330:CDS | 35.0% |
| TTGATACTTGTCTTCCTCTT+GGG | + | chr5_4:26225506-26225525 | None:intergenic | 35.0% | |
| GGTGGTTTCAAATCAACTTA+TGG | - | chr5_4:26225664-26225683 | Msa0846330:CDS | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | - | chr5_4:26225855-26225874 | Msa0846330:CDS | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | - | chr5_4:26225856-26225875 | Msa0846330:CDS | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | - | chr5_4:26225874-26225893 | Msa0846330:intron | 35.0% | |
| AAAAGAGGGATTTGATCTTG+CGG | - | chr5_4:26226073-26226092 | Msa0846330:CDS | 35.0% | |
| TCTTAATTGTTGTAGGCAAG+AGG | - | chr5_4:26224822-26224841 | Msa0846330:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | - | chr5_4:26224856-26224875 | Msa0846330:intron | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | - | chr5_4:26224863-26224882 | Msa0846330:intron | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | - | chr5_4:26225098-26225117 | Msa0846330:intron | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | - | chr5_4:26225249-26225268 | Msa0846330:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | - | chr5_4:26225250-26225269 | Msa0846330:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | - | chr5_4:26225251-26225270 | Msa0846330:CDS | 35.0% | |
| !! | GAGTGCTGAGTTTATTTCAA+AGG | - | chr5_4:26225275-26225294 | Msa0846330:CDS | 35.0% |
| TTGATACTTGTCTTCCTCTT+GGG | + | chr5_4:26225506-26225525 | None:intergenic | 35.0% | |
| GGTGGTTTCAAATCAACTTA+TGG | - | chr5_4:26225664-26225683 | Msa0846330:CDS | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | - | chr5_4:26225855-26225874 | Msa0846330:CDS | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | - | chr5_4:26225856-26225875 | Msa0846330:CDS | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | - | chr5_4:26225874-26225893 | Msa0846330:intron | 35.0% | |
| AAAAGAGGGATTTGATCTTG+CGG | - | chr5_4:26226073-26226092 | Msa0846330:CDS | 35.0% | |
| !! | GTTGACTTTTGATGAGAGTC+TGG | - | chr5_4:26225050-26225069 | Msa0846330:CDS | 40.0% |
| GGGTTATCGAAAGCGATTTA+TGG | - | chr5_4:26225248-26225267 | Msa0846330:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | - | chr5_4:26225252-26225271 | Msa0846330:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | + | chr5_4:26225436-26225455 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | - | chr5_4:26225439-26225458 | Msa0846330:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | + | chr5_4:26225507-26225526 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | - | chr5_4:26225643-26225662 | Msa0846330:CDS | 40.0% | |
| AAACCACCCACATAGAAAGA+GGG | + | chr5_4:26225652-26225671 | None:intergenic | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | - | chr5_4:26225703-26225722 | Msa0846330:intron | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | - | chr5_4:26225867-26225886 | Msa0846330:intron | 40.0% |
| ACCACAATTACACTAACAGG+TGG | - | chr5_4:26225996-26226015 | Msa0846330:CDS | 40.0% | |
| TCCACCTGTTAGTGTAATTG+TGG | + | chr5_4:26226000-26226019 | None:intergenic | 40.0% | |
| TTACACTAACAGGTGGATGA+AGG | - | chr5_4:26226003-26226022 | Msa0846330:CDS | 40.0% | |
| GGATTTGATCTTGCGGAATT+CGG | - | chr5_4:26226080-26226099 | Msa0846330:CDS | 40.0% | |
| !! | GTTGACTTTTGATGAGAGTC+TGG | - | chr5_4:26225050-26225069 | Msa0846330:CDS | 40.0% |
| GGGTTATCGAAAGCGATTTA+TGG | - | chr5_4:26225248-26225267 | Msa0846330:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | - | chr5_4:26225252-26225271 | Msa0846330:CDS | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | + | chr5_4:26225436-26225455 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | - | chr5_4:26225439-26225458 | Msa0846330:CDS | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | + | chr5_4:26225507-26225526 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | - | chr5_4:26225643-26225662 | Msa0846330:CDS | 40.0% | |
| AAACCACCCACATAGAAAGA+GGG | + | chr5_4:26225652-26225671 | None:intergenic | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | - | chr5_4:26225703-26225722 | Msa0846330:intron | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | - | chr5_4:26225867-26225886 | Msa0846330:intron | 40.0% |
| ACCACAATTACACTAACAGG+TGG | - | chr5_4:26225996-26226015 | Msa0846330:CDS | 40.0% | |
| TCCACCTGTTAGTGTAATTG+TGG | + | chr5_4:26226000-26226019 | None:intergenic | 40.0% | |
| TTACACTAACAGGTGGATGA+AGG | - | chr5_4:26226003-26226022 | Msa0846330:CDS | 40.0% | |
| GGATTTGATCTTGCGGAATT+CGG | - | chr5_4:26226080-26226099 | Msa0846330:CDS | 40.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | - | chr5_4:26225200-26225219 | Msa0846330:CDS | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | - | chr5_4:26225253-26225272 | Msa0846330:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | - | chr5_4:26225445-26225464 | Msa0846330:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | - | chr5_4:26225642-26225661 | Msa0846330:CDS | 45.0% | |
| GAAACCACCCACATAGAAAG+AGG | + | chr5_4:26225653-26225672 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | - | chr5_4:26225709-26225728 | Msa0846330:intron | 45.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | - | chr5_4:26225200-26225219 | Msa0846330:CDS | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | - | chr5_4:26225253-26225272 | Msa0846330:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | - | chr5_4:26225445-26225464 | Msa0846330:CDS | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | - | chr5_4:26225642-26225661 | Msa0846330:CDS | 45.0% | |
| GAAACCACCCACATAGAAAG+AGG | + | chr5_4:26225653-26225672 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | - | chr5_4:26225709-26225728 | Msa0846330:intron | 45.0% | |
| !!! | TAAATATTATCTTATTTTAT+AGG | - | chr5_4:26224775-26224794 | Msa0846330:intron | 5.0% |
| !!! | TAAATATTATCTTATTTTAT+AGG | - | chr5_4:26224775-26224794 | Msa0846330:intron | 5.0% |
| AGGAACTAGGAAGTTGCTGC+AGG | - | chr5_4:26224876-26224895 | Msa0846330:intron | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | - | chr5_4:26224877-26224896 | Msa0846330:intron | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | - | chr5_4:26225646-26225665 | Msa0846330:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | - | chr5_4:26225719-26225738 | Msa0846330:intron | 50.0% | |
| AGGAACTAGGAAGTTGCTGC+AGG | - | chr5_4:26224876-26224895 | Msa0846330:intron | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | - | chr5_4:26224877-26224896 | Msa0846330:intron | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | - | chr5_4:26225646-26225665 | Msa0846330:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | - | chr5_4:26225719-26225738 | Msa0846330:intron | 50.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | - | chr5_4:26225489-26225508 | Msa0846330:CDS | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | + | chr5_4:26225721-26225740 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | - | chr5_4:26225718-26225737 | Msa0846330:intron | 55.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | - | chr5_4:26225489-26225508 | Msa0846330:CDS | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | + | chr5_4:26225721-26225740 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | - | chr5_4:26225718-26225737 | Msa0846330:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 26224601 | 26226116 | 26224601 | ID=Msa0846330;Name=Msa0846330 |
| chr5_4 | mRNA | 26224601 | 26226116 | 26224601 | ID=Msa0846330-mRNA-1;Parent=Msa0846330;Name=Msa0846330-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.44|0.75|0.66|9|0|285 |
| chr5_4 | exon | 26226111 | 26226116 | 26226111 | ID=Msa0846330-mRNA-1:exon:10306;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26225994 | 26226100 | 26225994 | ID=Msa0846330-mRNA-1:exon:10305;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26225787 | 26225880 | 26225787 | ID=Msa0846330-mRNA-1:exon:10304;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26225598 | 26225690 | 26225598 | ID=Msa0846330-mRNA-1:exon:10303;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26225410 | 26225513 | 26225410 | ID=Msa0846330-mRNA-1:exon:10302;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26225185 | 26225338 | 26225185 | ID=Msa0846330-mRNA-1:exon:10301;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26224968 | 26225098 | 26224968 | ID=Msa0846330-mRNA-1:exon:10300;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26224792 | 26224858 | 26224792 | ID=Msa0846330-mRNA-1:exon:10299;Parent=Msa0846330-mRNA-1 |
| chr5_4 | exon | 26224601 | 26224702 | 26224601 | ID=Msa0846330-mRNA-1:exon:10298;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26226111 | 26226116 | 26226111 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26225994 | 26226100 | 26225994 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26225787 | 26225880 | 26225787 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26225598 | 26225690 | 26225598 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26225410 | 26225513 | 26225410 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26225185 | 26225338 | 26225185 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26224968 | 26225098 | 26224968 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26224792 | 26224858 | 26224792 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| chr5_4 | CDS | 26224601 | 26224702 | 26224601 | ID=Msa0846330-mRNA-1:cds;Parent=Msa0846330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
