AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1381140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381140 MtrunA17_Chr6g0488881 97.160 669 19 0 1 669 1 669 0.0 1367
Msa1381140 MtrunA17_Chr4g0000131 61.589 755 287 2 1 752 1 755 0.0 1012
Msa1381140 MtrunA17_Chr4g0020031 59.788 756 300 3 1 752 1 756 0.0 990
Msa1381140 MtrunA17_Chr7g0228111 59.656 756 301 3 1 752 1 756 0.0 979
Msa1381140 MtrunA17_Chr5g0396321 60.530 755 295 3 1 753 1 754 0.0 962
Msa1381140 MtrunA17_Chr6g0488821 57.366 767 312 7 1 753 1 766 0.0 929
Msa1381140 MtrunA17_Chr3g0090601 56.259 695 261 4 59 752 34 686 0.0 820
Msa1381140 MtrunA17_Chr8g0342291 59.008 605 239 2 154 757 7 603 0.0 801
Msa1381140 MtrunA17_Chr4g0000191 63.400 500 182 1 254 752 1 500 0.0 694
Msa1381140 MtrunA17_Chr8g0342311 60.196 510 202 1 249 757 11 520 0.0 686
Msa1381140 MtrunA17_Chr7g0238841 56.055 512 213 3 254 753 1 512 0.0 623
Msa1381140 MtrunA17_Chr6g0463651 79.920 249 50 0 488 736 1 249 1.52e-146 429
Msa1381140 MtrunA17_Chr8g0342271 59.259 297 120 1 154 449 15 311 1.65e-137 409
Msa1381140 MtrunA17_Chr6g0463701 74.074 216 56 0 307 522 12 227 2.19e-118 357
Msa1381140 MtrunA17_Chr6g0486411 56.579 304 110 3 452 753 2 285 1.17e-113 345
Msa1381140 MtrunA17_Chr6g0463661 75.294 170 42 0 320 489 1 170 3.36e-93 288
Msa1381140 MtrunA17_Chr7g0238831 50.890 281 124 4 1 269 1 279 8.47e-91 286
Msa1381140 MtrunA17_Chr6g0463721 82.166 157 28 0 1 157 1 157 6.14e-85 267
Msa1381140 MtrunA17_Chr8g0342251 53.659 205 89 1 521 719 1 205 2.85e-77 248
Msa1381140 MtrunA17_Chr6g0486401 54.067 209 94 2 254 460 1 209 8.50e-77 246
Msa1381140 MtrunA17_Chr4g0000181 54.315 197 90 0 64 260 1 197 7.88e-76 243
Msa1381140 MtrunA17_Chr8g0342321 50.532 188 93 0 65 252 3 190 8.05e-68 222
Msa1381140 MtrunA17_Chr6g0486391 55.621 169 74 1 90 258 4 171 4.09e-65 214
Msa1381140 MtrunA17_Chr6g0463691 83.333 120 20 0 606 725 8 127 4.72e-64 209
Msa1381140 MtrunA17_Chr8g0342241 51.685 178 81 1 488 665 2 174 4.27e-57 192
Msa1381140 MtrunA17_Chr8g0342301 50.314 159 77 1 1 157 1 159 4.92e-48 167
Msa1381140 MtrunA17_Chr6g0488871 96.667 60 2 0 703 762 1 60 8.77e-35 126
Msa1381140 MtrunA17_Chr8g0342281 47.015 134 69 1 1 132 1 134 1.98e-34 128
Msa1381140 MtrunA17_Chr6g0463671 83.051 59 10 0 254 312 1 59 2.36e-30 113
Msa1381140 MtrunA17_Chr6g0463711 83.333 54 9 0 254 307 1 54 1.51e-25 100
Msa1381140 MtrunA17_Chr8g0342261 63.793 58 21 0 448 505 31 88 6.78e-21 89.0
Msa1381140 MtrunA17_Chr8g0342331 57.353 68 27 1 1 66 1 68 8.53e-20 84.3
Msa1381140 MtrunA17_Chr6g0486381 56.944 72 27 2 1 68 1 72 1.44e-18 80.9
Msa1381140 MtrunA17_Chr3g0090611 45.679 81 42 1 1 79 1 81 2.28e-17 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381140 AT2G07050.1 60.950 758 293 3 1 756 1 757 0.0 1004
Msa1381140 AT1G78960.2 58.289 760 313 3 1 756 1 760 0.0 961
Msa1381140 AT1G78960.1 58.289 760 313 3 1 756 1 760 0.0 961
Msa1381140 AT1G78960.3 58.289 760 313 3 1 756 1 760 0.0 961
Msa1381140 AT1G78955.1 59.656 756 301 2 1 752 1 756 0.0 961
Msa1381140 AT1G78950.2 58.598 756 309 2 1 752 10 765 0.0 952
Msa1381140 AT1G78950.1 58.598 756 309 2 1 752 1 756 0.0 952
Msa1381140 AT1G78960.4 58.368 723 297 3 1 719 1 723 0.0 914
Msa1381140 AT1G78970.1 57.199 757 317 4 1 753 1 754 0.0 912
Msa1381140 AT1G78970.2 57.199 757 317 4 1 753 1 754 0.0 912
Msa1381140 AT1G78970.3 57.199 757 317 4 1 753 1 754 0.0 912
Msa1381140 AT1G66960.3 55.644 753 330 2 1 749 1 753 0.0 909
Msa1381140 AT1G66960.1 55.644 753 330 2 1 749 1 753 0.0 909
Msa1381140 AT1G66960.4 55.644 753 330 2 1 749 1 753 0.0 909
Msa1381140 AT1G66960.2 55.644 753 330 2 1 749 10 762 0.0 909
Msa1381140 AT2G07050.2 62.048 664 250 2 94 756 4 666 0.0 904
Msa1381140 AT1G78955.4 59.855 690 276 1 64 752 2 691 0.0 888
Msa1381140 AT3G45130.4 57.784 758 313 5 1 754 1 755 0.0 857
Msa1381140 AT3G45130.1 57.784 758 313 5 1 754 1 755 0.0 857
Msa1381140 AT3G45130.5 57.784 758 313 5 1 754 1 755 0.0 857
Msa1381140 AT3G45130.2 57.784 758 313 5 1 754 1 755 0.0 857
Msa1381140 AT3G45130.3 57.784 758 313 5 1 754 1 755 0.0 857
Msa1381140 AT1G78955.2 59.209 657 267 1 64 719 2 658 0.0 832
Msa1381140 AT1G78960.5 60.099 609 242 1 149 756 1 609 0.0 812
Msa1381140 AT1G78500.2 51.187 758 360 5 1 748 1 758 0.0 805
Msa1381140 AT1G78500.1 51.187 758 360 5 1 748 1 758 0.0 805
Msa1381140 AT5G36150.1 49.603 756 377 3 1 752 1 756 0.0 804
Msa1381140 AT5G36150.2 49.603 756 377 3 1 752 1 756 0.0 804
Msa1381140 AT4G15370.2 49.339 756 368 5 1 748 1 749 0.0 784
Msa1381140 AT4G15370.1 49.144 759 368 6 1 748 1 752 0.0 780
Msa1381140 AT5G48010.2 48.489 761 379 6 1 750 1 759 0.0 779
Msa1381140 AT4G15340.1 49.020 765 381 5 1 756 1 765 0.0 778
Msa1381140 AT5G42600.1 48.473 753 382 4 1 748 1 752 0.0 764
Msa1381140 AT1G78955.5 61.446 581 223 1 173 752 1 581 0.0 764
Msa1381140 AT1G78955.3 59.038 603 246 1 64 665 2 604 0.0 761
Msa1381140 AT5G48010.1 47.700 761 377 7 1 750 1 751 0.0 757
Msa1381140 AT3G29255.1 45.080 752 349 7 2 748 6 698 0.0 675
Msa1381140 AT4G15340.2 48.537 581 290 5 1 572 1 581 0.0 577
Msa1381140 AT1G78480.1 34.615 156 87 5 49 197 29 176 1.84e-18 85.1

Find 229 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATATATGTTGAGATAATT+TGG 0.169555 tig0020422:-115647 None:intergenic
AATTTGCACGGTTGTCTTCT+AGG 0.195387 tig0020422:-125070 None:intergenic
TGGGCTTTGTTGTCCCTTAT+CGG 0.261922 tig0020422:+125107 Msa1381140:CDS
ATCCACTTCCACCAGAATTC+TGG 0.268631 tig0020422:+122667 Msa1381140:CDS
CTCACTACCCAGGTGCTAAT+TGG 0.269588 tig0020422:+125572 Msa1381140:three_prime_UTR
ATGCCCATGTCATATCTATA+TGG 0.269795 tig0020422:+122850 Msa1381140:CDS
AGGTGTCGTTAATATTATTA+AGG 0.272115 tig0020422:+115608 Msa1381140:five_prime_UTR
TTCCATCATGGGGAAAGTTC+TGG 0.280761 tig0020422:+122514 Msa1381140:CDS
CCCGAATCCCTGATTACTTC+TGG 0.281207 tig0020422:+123363 Msa1381140:CDS
CAACTACCTGTGAGGCCTTC+AGG 0.291777 tig0020422:-123867 None:intergenic
GCCTTGTCTTCACCATCTTC+AGG 0.293538 tig0020422:-122441 None:intergenic
CTTCTCTCAGTGATTTGATT+AGG 0.298981 tig0020422:-122900 None:intergenic
GGATGAATAGGGGTGAATTT+TGG 0.300808 tig0020422:-122696 None:intergenic
AGTTTAACTGCTGGTGGAAT+GGG 0.308591 tig0020422:-120511 None:intergenic
TTTGGTAGAAACCAGAATTC+TGG 0.308766 tig0020422:-122678 None:intergenic
CAATGGAGAGATGCAGAAAT+TGG 0.310238 tig0020422:+122463 Msa1381140:CDS
ATAATATATATACCTTGTTT+TGG 0.312394 tig0020422:-124977 None:intergenic
AGAGAAGAAGATATCATAAC+AGG 0.329769 tig0020422:+120535 Msa1381140:CDS
TTGTGCTATGACCCTCTATA+TGG 0.332950 tig0020422:-122368 None:intergenic
TAACTTCATTCCACGGTGTA+TGG 0.336068 tig0020422:-125265 None:intergenic
TCTTGTGGTGTTCCTGCATT+TGG 0.337805 tig0020422:-115781 None:intergenic
AGGTATGCACCTGGATGAAT+AGG 0.345041 tig0020422:-122708 None:intergenic
GTAATGGCCCTCTATGTTAC+AGG 0.353508 tig0020422:+120880 Msa1381140:CDS
TTCGATATGATGAGTAGTTC+AGG 0.355276 tig0020422:-125462 None:intergenic
GAGGTCAGAACTTTGTTTGA+TGG 0.356213 tig0020422:-115854 None:intergenic
CATAACATATCTTGAATCAT+AGG 0.357423 tig0020422:-123131 None:intergenic
TTCAATGAAATGAATTGCTT+TGG 0.360615 tig0020422:-124622 None:intergenic
ACAATTCAAGGTGCAGCATT+TGG 0.361763 tig0020422:-125544 None:intergenic
ACTCCACAGGTACGGCTGTT+GGG 0.364012 tig0020422:+124800 Msa1381140:intron
CTATGATTCAAGATATGTTA+TGG 0.368024 tig0020422:+123132 Msa1381140:CDS
AGTTTGTATGCCTCTGAGTT+CGG 0.368801 tig0020422:-123332 None:intergenic
AAATTCTTACAGTTGGTTAG+AGG 0.371127 tig0020422:+124242 Msa1381140:CDS
GTTTGTATGCCTCTGAGTTC+GGG 0.373213 tig0020422:-123331 None:intergenic
CCTTGACCATGGTGGTTTAG+TGG 0.374435 tig0020422:+122488 Msa1381140:CDS
TTCCAGTTGATTTGATCATA+AGG 0.375182 tig0020422:-122937 None:intergenic
AACCTTAGCAATAGTATTCC+GGG 0.376806 tig0020422:-122965 None:intergenic
GGATCCCTTGATGAGGTTCT+AGG 0.377958 tig0020422:+120901 Msa1381140:CDS
GCCAGAAGTAATCAGGGATT+CGG 0.379265 tig0020422:-123364 None:intergenic
TCTGCAAGCCAGAAGTAATC+AGG 0.379292 tig0020422:-123371 None:intergenic
CAGTTTAACTGCTGGTGGAA+TGG 0.379805 tig0020422:-120512 None:intergenic
TTGTCAAAGCAGCTTCCTAA+TGG 0.380943 tig0020422:+124927 Msa1381140:CDS
CTGCCAGAAAATACAAAATT+CGG 0.382313 tig0020422:-125639 None:intergenic
ATTTCTGTGAATAACTTCAT+AGG 0.384332 tig0020422:+115736 Msa1381140:CDS
ATCGAAACATCTTTCCCATA+TGG 0.386037 tig0020422:+125479 Msa1381140:CDS
TTGTTGTCCCTTATCGGTGC+AGG 0.386134 tig0020422:+125113 Msa1381140:CDS
TGTCAAAGCAGCTTCCTAAT+GGG 0.387123 tig0020422:+124928 Msa1381140:CDS
AATAATGAATGCAGAGCTTT+GGG 0.387482 tig0020422:+123749 Msa1381140:intron
TATATATTGCCTTTCTGAAA+AGG 0.390011 tig0020422:-125769 None:intergenic
AACCTTATGATCAAATCAAC+TGG 0.400633 tig0020422:+122935 Msa1381140:CDS
TTTCCTTAGCTCTATGAGTT+GGG 0.400737 tig0020422:-124584 None:intergenic
TAATAATGAATGCAGAGCTT+TGG 0.407402 tig0020422:+123748 Msa1381140:intron
TAATGGCGGGTTCCCTGCTT+GGG 0.410324 tig0020422:+124212 Msa1381140:CDS
TATGATTCAAGATATGTTAT+GGG 0.411393 tig0020422:+123133 Msa1381140:CDS
ATACTCTCCCAGAGCCCATA+TGG 0.417018 tig0020422:-125494 None:intergenic
GGTATGCACCTGGATGAATA+GGG 0.417291 tig0020422:-122707 None:intergenic
GAGGGTCATAGCACAATGTT+TGG 0.419263 tig0020422:+122375 Msa1381140:CDS
CATCTTTCCCATATGGGCTC+TGG 0.420694 tig0020422:+125486 Msa1381140:CDS
GTAGCTTTGTGAAGAGATAC+AGG 0.421470 tig0020422:-124560 None:intergenic
GATTTGATTAGGTCAGTGAT+AGG 0.421520 tig0020422:-122889 None:intergenic
CACTGGCCTGCAGAATCTGC+TGG 0.422487 tig0020422:+120625 Msa1381140:CDS
TCTTCTCTCAGTTTAACTGC+TGG 0.428487 tig0020422:-120520 None:intergenic
TACTTCTGGCTTGCAGAAGA+TGG 0.431129 tig0020422:+123377 Msa1381140:CDS
AAACCTTAGCAATAGTATTC+CGG 0.434367 tig0020422:-122966 None:intergenic
TCTCTCAGTTTAACTGCTGG+TGG 0.434390 tig0020422:-120517 None:intergenic
ATTTCCTTAGCTCTATGAGT+TGG 0.436325 tig0020422:-124585 None:intergenic
AACCTGCCCTGCACCGATAA+GGG 0.436795 tig0020422:-125120 None:intergenic
TCCATCATGGGGAAAGTTCT+GGG 0.438199 tig0020422:+122515 Msa1381140:CDS
TAACCTGCCCTGCACCGATA+AGG 0.438248 tig0020422:-125121 None:intergenic
TTGAAGACACACTGATTGAG+AGG 0.442774 tig0020422:+124389 Msa1381140:CDS
CCAGAAGTAATCAGGGATTC+GGG 0.443793 tig0020422:-123363 None:intergenic
ATGCAACTACAGGAGATAAC+AGG 0.444350 tig0020422:+125418 Msa1381140:intron
GTTTAGTGGCTATTCCATCA+TGG 0.446920 tig0020422:+122502 Msa1381140:CDS
TAATGCCTTCTGTCTAAGCT+TGG 0.447789 tig0020422:-123204 None:intergenic
AAGATAGCAGAAGGAGGAGA+AGG 0.447791 tig0020422:+115709 Msa1381140:CDS
CAAATTTAGTTCAAACTTCG+TGG 0.454847 tig0020422:+125087 Msa1381140:CDS
ATAGAATACCAGGATCCATC+AGG 0.456520 tig0020422:-124657 None:intergenic
GTAATGGCGGGTTCCCTGCT+TGG 0.457885 tig0020422:+124211 Msa1381140:CDS
AAAATGCCAACTGATCTTGT+TGG 0.460164 tig0020422:+124126 Msa1381140:CDS
ATTATGTTTGATAGCGCGTT+GGG 0.462799 tig0020422:+123301 Msa1381140:CDS
AGCCTCAAAATTCTTACAGT+TGG 0.465115 tig0020422:+124235 Msa1381140:CDS
AACCAGAATTCTGGTGGAAG+TGG 0.466445 tig0020422:-122669 None:intergenic
TCGAAACATCTTTCCCATAT+GGG 0.466714 tig0020422:+125480 Msa1381140:CDS
TACTCCACAGGTACGGCTGT+TGG 0.468900 tig0020422:+124799 Msa1381140:intron
TGGCACTTGGTTTGCTGTAG+AGG 0.475158 tig0020422:+124839 Msa1381140:CDS
TGCCCATGTCATATCTATAT+GGG 0.475927 tig0020422:+122851 Msa1381140:CDS
AGATGGAGATTTCCCACAAC+AGG 0.476470 tig0020422:+125308 Msa1381140:CDS
CACAAAACCCTGATGGATCC+TGG 0.477094 tig0020422:+124649 Msa1381140:CDS
AACAGTAGATACCTTTGCAT+TGG 0.479394 tig0020422:+123263 Msa1381140:CDS
AACATAAGAAGGAAATTGTT+CGG 0.480544 tig0020422:+120929 Msa1381140:CDS
TCAATCTCAGCATGTTCTTG+TGG 0.480961 tig0020422:-115796 None:intergenic
ATCAATTCACAGATGGAAGA+TGG 0.483390 tig0020422:+125291 Msa1381140:CDS
ACCCAGAACTTTCCCCATGA+TGG 0.487722 tig0020422:-122516 None:intergenic
GGCACTTGGTTTGCTGTAGA+GGG 0.487793 tig0020422:+124840 Msa1381140:CDS
ATCTTTCCCATATGGGCTCT+GGG 0.491199 tig0020422:+125487 Msa1381140:CDS
ATGGGGATTTCTTTATCATG+TGG 0.493396 tig0020422:+123151 Msa1381140:CDS
ACTTCATAGGACGTCAACAC+TGG 0.494111 tig0020422:+115749 Msa1381140:CDS
GTCCCTTATCGGTGCAGGGC+AGG 0.495376 tig0020422:+125118 Msa1381140:CDS
ACAATTTCCTTCTTATGTTG+AGG 0.498096 tig0020422:-120925 None:intergenic
AATAGGTATGTTGAGTGCAC+TGG 0.502674 tig0020422:+124522 Msa1381140:intron
CGCTACAGAGCAGTAATGGC+GGG 0.502708 tig0020422:+124199 Msa1381140:CDS
CTCTCGCTACAGAGCAGTAA+TGG 0.505047 tig0020422:+124195 Msa1381140:CDS
CATTGATTACAACAATAAGA+AGG 0.505283 tig0020422:+120563 Msa1381140:CDS
TCTAGGACCTCAACATAAGA+AGG 0.512830 tig0020422:+120918 Msa1381140:CDS
TGAAATGAATTGCTTTGGAA+AGG 0.513073 tig0020422:-124617 None:intergenic
TTTAGTGGCTATTCCATCAT+GGG 0.514005 tig0020422:+122503 Msa1381140:CDS
TCACGCTATATATAGGTACT+TGG 0.516796 tig0020422:+122621 Msa1381140:intron
TAGTGAGTAGTTACAATTCA+AGG 0.517855 tig0020422:-125556 None:intergenic
GTGTCTTCAAAGAATTCAGT+TGG 0.517960 tig0020422:-124376 None:intergenic
AGATAGCAGAAGGAGGAGAA+GGG 0.517972 tig0020422:+115710 Msa1381140:CDS
GAATTTGTGCAGACAAGACT+CGG 0.520633 tig0020422:-125522 None:intergenic
AAAGGCCAGCAATTCAGAAA+AGG 0.520870 tig0020422:-123179 None:intergenic
CTCCACAGGTACGGCTGTTG+GGG 0.523437 tig0020422:+124801 Msa1381140:intron
GACAGAACGAAGATGGTGGA+TGG 0.523858 tig0020422:+122340 Msa1381140:intron
ATATCTTGAATCATAGGATG+TGG 0.524227 tig0020422:-123125 None:intergenic
TTCAAGCTCATGATGGCCAC+TGG 0.530366 tig0020422:+120608 Msa1381140:CDS
GTCTCTGACTGCACCGCAGA+AGG 0.530369 tig0020422:+123976 Msa1381140:CDS
CTACACTAATTACCTGTTGT+GGG 0.532832 tig0020422:-125320 None:intergenic
ACAGAACGAAGATGGTGGAT+GGG 0.533685 tig0020422:+122341 Msa1381140:intron
GCTACACTAATTACCTGTTG+TGG 0.534062 tig0020422:-125321 None:intergenic
TATATTGCACTGAGGCTGCT+TGG 0.534774 tig0020422:+122411 Msa1381140:CDS
TCTATATGGGAAGAAGTTTG+TGG 0.537189 tig0020422:+122864 Msa1381140:CDS
AAATCAACTGGAACAAAGCC+CGG 0.537569 tig0020422:+122947 Msa1381140:CDS
TCGATATGATGAGTAGTTCA+GGG 0.538351 tig0020422:-125461 None:intergenic
TTTGCAAGGAAGGACTGTTA+CGG 0.538358 tig0020422:-124887 None:intergenic
AACTTCATTCCACGGTGTAT+GGG 0.539799 tig0020422:-125264 None:intergenic
AAGAACATGCTGAGATTGAA+AGG 0.540342 tig0020422:+115800 Msa1381140:CDS
TACTCTCCCAGAGCCCATAT+GGG 0.543860 tig0020422:-125493 None:intergenic
TGTTGTCCCTTATCGGTGCA+GGG 0.544685 tig0020422:+125114 Msa1381140:CDS
AGATAACAGGAGTATTTATG+AGG 0.545080 tig0020422:+125431 Msa1381140:CDS
GTTAATAATCAATTCACAGA+TGG 0.545863 tig0020422:+125284 Msa1381140:CDS
TGTAACGTGAGTGAAGAGTA+TGG 0.547729 tig0020422:+123817 Msa1381140:CDS
TGACTTCCTGAAGGCCTCAC+AGG 0.548212 tig0020422:+123861 Msa1381140:CDS
TGGGGATTTCTTTATCATGT+GGG 0.548896 tig0020422:+123152 Msa1381140:CDS
TGGGGAATTTGCTATACGTA+TGG 0.549854 tig0020422:+124819 Msa1381140:CDS
GCACTGAGGCTGCTTGGAGA+AGG 0.550449 tig0020422:+122417 Msa1381140:CDS
CTTGGAGAAGGACCTGAAGA+TGG 0.550707 tig0020422:+122429 Msa1381140:CDS
AAATTTAGTTCAAACTTCGT+GGG 0.551738 tig0020422:+125088 Msa1381140:CDS
AGCCCGGAATACTATTGCTA+AGG 0.551892 tig0020422:+122963 Msa1381140:CDS
TCTCAATGCATGACCAAGGT+TGG 0.552996 tig0020422:+123950 Msa1381140:CDS
CAGAACGAAGATGGTGGATG+GGG 0.555253 tig0020422:+122342 Msa1381140:intron
AGAAGATGGCTTGAAAATCC+AGG 0.558427 tig0020422:+123391 Msa1381140:CDS
CTATATGGGAAGAAGTTTGT+GGG 0.559860 tig0020422:+122865 Msa1381140:CDS
TTTGCTATACGTATGGCACT+TGG 0.562241 tig0020422:+124826 Msa1381140:CDS
ATTTGATTAGGTCAGTGATA+GGG 0.563688 tig0020422:-122888 None:intergenic
TGGAAGTTGAAGATAGCAGA+AGG 0.564446 tig0020422:+115700 Msa1381140:CDS
TGATTATTAACTTCATTCCA+CGG 0.564716 tig0020422:-125272 None:intergenic
AAAGGGCCAGCAGATTCTGC+AGG 0.566025 tig0020422:-120631 None:intergenic
TCCTCAATTCAAGCTCATGA+TGG 0.566026 tig0020422:+120601 Msa1381140:CDS
GAAAACACACAAAACCCTGA+TGG 0.566223 tig0020422:+124642 Msa1381140:CDS
CAGGTAGTTGAAAATCCATC+CGG 0.568896 tig0020422:+123880 Msa1381140:CDS
AAGTTTGAACTAAATTTGCA+CGG 0.573160 tig0020422:-125082 None:intergenic
ATTCCACGGTGTATGGGTGT+AGG 0.573394 tig0020422:-125258 None:intergenic
GTACATTGCTTTGAACTCAC+CGG 0.573832 tig0020422:-123899 None:intergenic
TGGATGGGGATTCCATATAG+AGG 0.575350 tig0020422:+122356 Msa1381140:CDS
TGACCTCTTGATGAGAATGC+AGG 0.575657 tig0020422:+115870 Msa1381140:CDS
TTCTGTCTAAGCTTGGTGAA+AGG 0.576271 tig0020422:-123197 None:intergenic
GCCATCATGAGCTTGAATTG+AGG 0.576423 tig0020422:-120602 None:intergenic
ATTGATTACAACAATAAGAA+GGG 0.576445 tig0020422:+120564 Msa1381140:CDS
CTTCATAGGACGTCAACACT+GGG 0.580277 tig0020422:+115750 Msa1381140:CDS
TATTATGTTTGATAGCGCGT+TGG 0.580947 tig0020422:+123300 Msa1381140:CDS
AGATGGTGAAGACAAGGCAA+TGG 0.581885 tig0020422:+122446 Msa1381140:CDS
AAATTCACCCCTATTCATCC+AGG 0.582742 tig0020422:+122699 Msa1381140:CDS
TGGGAATTTGATCCAAATGC+AGG 0.583989 tig0020422:+115769 Msa1381140:CDS
GTGTACAACCAATTAGCACC+TGG 0.583999 tig0020422:-125580 None:intergenic
CAAGGGATCCTGTAACATAG+AGG 0.586621 tig0020422:-120888 None:intergenic
ATACCTGCATTCTCATCAAG+AGG 0.587025 tig0020422:-115873 None:intergenic
TCATGTGCTTTCCGAAGTGT+AGG 0.587144 tig0020422:-123841 None:intergenic
TTTCACCAAGCTTAGACAGA+AGG 0.587774 tig0020422:+123199 Msa1381140:CDS
TCTTTCTTCAAGAATATCAT+CGG 0.588040 tig0020422:+125701 Msa1381140:three_prime_UTR
ATTGCTTTGAACTCACCGGA+TGG 0.590740 tig0020422:-123895 None:intergenic
GTCAAAGCAGCTTCCTAATG+GGG 0.591159 tig0020422:+124929 Msa1381140:CDS
GGTAGAAACCAGAATTCTGG+TGG 0.591415 tig0020422:-122675 None:intergenic
GAGGTCCTAGAACCTCATCA+AGG 0.592674 tig0020422:-120906 None:intergenic
CCACTAAACCACCATGGTCA+AGG 0.595228 tig0020422:-122488 None:intergenic
TTGCATTGGAAGTGTAGAGA+AGG 0.596365 tig0020422:+123277 Msa1381140:CDS
CTGCAAGCCAGAAGTAATCA+GGG 0.596867 tig0020422:-123370 None:intergenic
ATGATTCAAGATATGTTATG+GGG 0.597243 tig0020422:+123134 Msa1381140:CDS
CTTCCCATATAGATATGACA+TGG 0.597880 tig0020422:-122854 None:intergenic
ACCTGAAGATGGTGAAGACA+AGG 0.599140 tig0020422:+122440 Msa1381140:CDS
AAGAGTATGGTCCTACACTT+CGG 0.599344 tig0020422:+123830 Msa1381140:CDS
CAGCAGATTCTGCAGGCCAG+TGG 0.600116 tig0020422:-120624 None:intergenic
CTGCACCGCAGAAGGACTCA+AGG 0.601671 tig0020422:+123984 Msa1381140:CDS
ATGGGGAAAGTTCTGGGTCA+CGG 0.605144 tig0020422:+122521 Msa1381140:CDS
GTTTAACTGCTGGTGGAATG+GGG 0.606958 tig0020422:-120510 None:intergenic
AGTCAGAGACTTGCCAACCT+TGG 0.608423 tig0020422:-123963 None:intergenic
TCGGTATTTATATAATCACC+AGG 0.608586 tig0020422:+120948 Msa1381140:CDS
ACACCCAACTCATAGAGCTA+AGG 0.609087 tig0020422:+124581 Msa1381140:CDS
TCTCTACACTTCCAATGCAA+AGG 0.614361 tig0020422:-123274 None:intergenic
CTTGGAGTTTATGAGTGGCG+AGG 0.615223 tig0020422:+122639 Msa1381140:CDS
TCAAAGCAGCTTCCTAATGG+GGG 0.615650 tig0020422:+124930 Msa1381140:CDS
AAGGGATCCTGTAACATAGA+GGG 0.615864 tig0020422:-120887 None:intergenic
GGAAAATGTTGTGCTACTGT+CGG 0.617544 tig0020422:+122818 Msa1381140:CDS
TGAAGACACACTGATTGAGA+GGG 0.617821 tig0020422:+124390 Msa1381140:CDS
TTATTTGTCAAGCCAAAACA+AGG 0.619533 tig0020422:+124965 Msa1381140:CDS
ATGAGGTGACAGAACGAAGA+TGG 0.622105 tig0020422:+122333 Msa1381140:intron
AATTAATCATGTGCGTTACG+AGG 0.622234 tig0020422:+123235 Msa1381140:CDS
GACACATATGCAAAGGATCG+TGG 0.624587 tig0020422:+123923 Msa1381140:CDS
GAAAGCACATGACTTCCTGA+AGG 0.625323 tig0020422:+123852 Msa1381140:CDS
GAGCTTTGGGTGTCAAATGT+GGG 0.627157 tig0020422:+123762 Msa1381140:intron
TATCTTGAATCATAGGATGT+GGG 0.628079 tig0020422:-123124 None:intergenic
GAGAAGAAGATATCATAACA+GGG 0.628365 tig0020422:+120536 Msa1381140:CDS
GTAGAGGGACTAACAACTTG+TGG 0.629594 tig0020422:+124855 Msa1381140:CDS
AGGTACTTGGAGTTTATGAG+TGG 0.631997 tig0020422:+122634 Msa1381140:intron
AAGTTGAAGATAGCAGAAGG+AGG 0.632969 tig0020422:+115703 Msa1381140:CDS
AGAGCTTTGGGTGTCAAATG+TGG 0.632997 tig0020422:+123761 Msa1381140:intron
AGGTCCTAGAACCTCATCAA+GGG 0.639948 tig0020422:-120905 None:intergenic
ATGTACAGACACATATGCAA+AGG 0.641280 tig0020422:+123916 Msa1381140:CDS
TAAAACCTTGAGTCCTTCTG+CGG 0.644286 tig0020422:-123989 None:intergenic
TGTTACAGGATCCCTTGATG+AGG 0.647790 tig0020422:+120894 Msa1381140:CDS
TCGCTACAGAGCAGTAATGG+CGG 0.652702 tig0020422:+124198 Msa1381140:CDS
GTATGCACCTGGATGAATAG+GGG 0.653207 tig0020422:-122706 None:intergenic
CATTACTGCTCTGTAGCGAG+AGG 0.654544 tig0020422:-124194 None:intergenic
TAGAATACCAGGATCCATCA+GGG 0.660292 tig0020422:-124656 None:intergenic
TTAGTGGCTATTCCATCATG+GGG 0.661744 tig0020422:+122504 Msa1381140:CDS
CAAAGCAGCTTCCTAATGGG+GGG 0.662526 tig0020422:+124931 Msa1381140:CDS
AATTGGATCCTTGACCATGG+TGG 0.663800 tig0020422:+122480 Msa1381140:CDS
GGATGGGGATTCCATATAGA+GGG 0.664160 tig0020422:+122357 Msa1381140:CDS
AGGTGACAGAACGAAGATGG+TGG 0.664546 tig0020422:+122336 Msa1381140:intron
TGTACAACCAATTAGCACCT+GGG 0.664652 tig0020422:-125579 None:intergenic
TTCCCATATAGATATGACAT+GGG 0.670291 tig0020422:-122853 None:intergenic
AGAAGAAGATATCATAACAG+GGG 0.679958 tig0020422:+120537 Msa1381140:CDS
TAGCTTTGTGAAGAGATACA+GGG 0.686063 tig0020422:-124559 None:intergenic
GGTTGAAGACCCGAACTCAG+AGG 0.694258 tig0020422:+123322 Msa1381140:CDS
ACATTCTCAATGCATGACCA+AGG 0.704194 tig0020422:+123946 Msa1381140:CDS
ATTGTAACTACTCACTACCC+AGG 0.711259 tig0020422:+125562 Msa1381140:three_prime_UTR
GAATAGCCACTAAACCACCA+TGG 0.737768 tig0020422:-122494 None:intergenic
AGAAATTGGATCCTTGACCA+TGG 0.742771 tig0020422:+122477 Msa1381140:CDS
GATCCTACACCCATACACCG+TGG 0.761975 tig0020422:+125255 Msa1381140:CDS
CATTGAGCTATATTGCACTG+AGG 0.768445 tig0020422:+122403 Msa1381140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTAACTTTATTTTACT+CGG - tig0020422:117150-117169 None:intergenic 10.0%
!! TTTAATGTAACATTAATTAT+TGG + tig0020422:117379-117398 Msa1381140:intron 10.0%
!!! AACTATTAGATTTTAAAATA+GGG - tig0020422:117494-117513 None:intergenic 10.0%
!!! AAACTATTAGATTTTAAAAT+AGG - tig0020422:117495-117514 None:intergenic 10.0%
!!! ATTTTAAAATCTAATAGTTT+TGG + tig0020422:117495-117514 Msa1381140:intron 10.0%
!! ACAAAATTATAGATATTTAT+AGG + tig0020422:117930-117949 Msa1381140:intron 10.0%
!!! TATTTCGTTTTATTTTATTT+CGG + tig0020422:118513-118532 Msa1381140:intron 10.0%
!!! TATTTCGTTTTATTTTATTT+CGG - tig0020422:118513-118532 None:intergenic 10.0%
!!! GTTAGAAAAAATTTATTTTA+TGG - tig0020422:119398-119417 None:intergenic 10.0%
!!! TTATAAAAACTAGTTTTTTT+AGG + tig0020422:120289-120308 Msa1381140:intron 10.0%
!! ATATATATGTTGAGATAATT+TGG - tig0020422:115650-115669 None:intergenic 15.0%
!! ACTTGAAATTATATATCTAT+AGG - tig0020422:115943-115962 None:intergenic 15.0%
!!! TAAATGCTTTTTTTTTTTGT+CGG - tig0020422:116303-116322 None:intergenic 15.0%
!!! AAGAGCAATTTTATTTTTTT+TGG + tig0020422:116694-116713 Msa1381140:intron 15.0%
!!! AAGTGAATAAATTTTTTGTA+GGG - tig0020422:116958-116977 None:intergenic 15.0%
!!! AAAGTGAATAAATTTTTTGT+AGG - tig0020422:116959-116978 None:intergenic 15.0%
!!! TATTATTTGCATTTTTTTAC+CGG + tig0020422:116983-117002 Msa1381140:intron 15.0%
!! ATAAAATGCAAATATAATTC+CGG - tig0020422:117005-117024 None:intergenic 15.0%
!!! TGAAAACTTTTTACAAAAAA+TGG - tig0020422:117055-117074 None:intergenic 15.0%
!! TAAGTCTATTGAAAAAAAAA+AGG - tig0020422:117424-117443 None:intergenic 15.0%
!!! ACCATATTTTAATCATTTTA+TGG + tig0020422:117459-117478 Msa1381140:intron 15.0%
!! TCCATAAAATGATTAAAATA+TGG - tig0020422:117463-117482 None:intergenic 15.0%
!!! ACTATTAGATTTTAAAATAG+GGG - tig0020422:117493-117512 None:intergenic 15.0%
!!! ATTAACCATTTAAAATTTGA+CGG - tig0020422:117696-117715 None:intergenic 15.0%
!! TAAATGGTTAATTAAGTAAA+TGG + tig0020422:117704-117723 Msa1381140:intron 15.0%
!!! AATGTTGATAGAAAATTTTA+CGG + tig0020422:117838-117857 Msa1381140:intron 15.0%
!!! GATCACTATATTTTAAAATT+CGG - tig0020422:117974-117993 None:intergenic 15.0%
!!! ACTATAGTTTTACATTTTTT+AGG - tig0020422:118001-118020 None:intergenic 15.0%
!!! TCTAATTGTTTATACTTTTT+TGG - tig0020422:118026-118045 None:intergenic 15.0%
!! AAAGTATAAACAATTAGAAT+AGG + tig0020422:118028-118047 Msa1381140:intron 15.0%
!! GTTTAGTTATAGAAAAAATT+TGG + tig0020422:119749-119768 Msa1381140:intron 15.0%
!!! ATCTTTTTATATACGATTAA+AGG + tig0020422:119972-119991 Msa1381140:intron 15.0%
!!! AAAAAAAGTATTTTACTACA+AGG - tig0020422:120351-120370 None:intergenic 15.0%
!! TTTATACAAAAGAGAAAATT+TGG + tig0020422:120717-120736 Msa1381140:intron 15.0%
!!! AGTTATTTGTTTTTTTTTCA+GGG - tig0020422:121053-121072 None:intergenic 15.0%
!! ATATAAGTATATATATAGCA+AGG - tig0020422:121292-121311 None:intergenic 15.0%
!! GTTATTACTGAATAATAAAA+TGG - tig0020422:122063-122082 None:intergenic 15.0%
!! AAGATATAGATAATATAGAT+TGG - tig0020422:123006-123025 None:intergenic 15.0%
!! ATAAAAATACAATATTAACC+TGG - tig0020422:123412-123431 None:intergenic 15.0%
!! TAAATATGATTAGTATCTTT+AGG + tig0020422:123484-123503 Msa1381140:intron 15.0%
!! AAAATCTGATTCTATTATAT+GGG - tig0020422:123622-123641 None:intergenic 15.0%
!!! TAAATGTTAACTATTTTTGT+AGG + tig0020422:124031-124050 Msa1381140:intron 15.0%
!!! ATAATATATATACCTTGTTT+TGG - tig0020422:124980-124999 None:intergenic 15.0%
!!! TTTTCCTTGTTAATTTAAAT+AGG + tig0020422:125037-125056 Msa1381140:intron 15.0%
!! TATACCTATTTAAATTAACA+AGG - tig0020422:125044-125063 None:intergenic 15.0%
!! AGAATAGTATATAAAATTGA+TGG - tig0020422:125359-125378 None:intergenic 15.0%
!!! AAATGCTTTTTTTTTTTGTC+GGG - tig0020422:116302-116321 None:intergenic 20.0%
!!! TTAGCTTGTTTTTACTTATT+TGG - tig0020422:116475-116494 None:intergenic 20.0%
!!! AGCAATTTTATTTTTTTTGG+TGG + tig0020422:116697-116716 Msa1381140:intron 20.0%
!!! AATTTTATTTTTTTTGGTGG+TGG + tig0020422:116700-116719 Msa1381140:intron 20.0%
!! ATATCTGCAATTAAATGAAT+TGG - tig0020422:117233-117252 None:intergenic 20.0%
!! TGTAATTTACCTTAAATTTC+AGG + tig0020422:117259-117278 Msa1381140:intron 20.0%
!! AGATAATAACCTGAAATTTA+AGG - tig0020422:117271-117290 None:intergenic 20.0%
!!! TTTCTAAATACTTGTACTTT+TGG + tig0020422:117318-117337 Msa1381140:intron 20.0%
!!! AATAGACTTAATTGCAATTT+TGG + tig0020422:117434-117453 Msa1381140:intron 20.0%
!!! CTATTAGATTTTAAAATAGG+GGG - tig0020422:117492-117511 None:intergenic 20.0%
!!! TAAAACCGTCAAATTTTAAA+TGG + tig0020422:117688-117707 Msa1381140:intron 20.0%
!!! ATGTTGATAGAAAATTTTAC+GGG + tig0020422:117839-117858 Msa1381140:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + tig0020422:117899-117918 Msa1381140:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + tig0020422:117900-117919 Msa1381140:intron 20.0%
!! AATTAACCATAAATCACTAA+AGG - tig0020422:118237-118256 None:intergenic 20.0%
!!! AACATCTTGTTTTTATTGAA+AGG + tig0020422:118363-118382 Msa1381140:intron 20.0%
!! TTTATTGAAAGGATTAGATT+AGG + tig0020422:118374-118393 Msa1381140:intron 20.0%
!! TCTAGAAAATTACTAAGATT+TGG - tig0020422:119051-119070 None:intergenic 20.0%
!! TCTAGAAAATTACTAAGATT+TGG + tig0020422:119051-119070 Msa1381140:intron 20.0%
!! TTGCTTTCATTTACTTATTT+CGG + tig0020422:119198-119217 Msa1381140:intron 20.0%
!!! TTTTCTAACCAAAAGTAATT+AGG + tig0020422:119409-119428 Msa1381140:intron 20.0%
!! AAAACACTTCATAGTATATT+TGG - tig0020422:119586-119605 None:intergenic 20.0%
!!! AATTTGGTGTACATTTTATA+TGG + tig0020422:119765-119784 Msa1381140:intron 20.0%
!! GATGTAATTAATGTGATAAA+TGG + tig0020422:119811-119830 Msa1381140:intron 20.0%
!! ATTAATATAACAGTTGTCAT+TGG + tig0020422:120129-120148 Msa1381140:intron 20.0%
!! ATTGATTACAACAATAAGAA+GGG + tig0020422:120564-120583 Msa1381140:CDS 20.0%
!!! TCTTTTGTATAAAGATCAAA+GGG - tig0020422:120710-120729 None:intergenic 20.0%
!!! TTTTATATATAAGAAAAGGC+TGG - tig0020422:120778-120797 None:intergenic 20.0%
!!! CCAGTTTTATATATAAGAAA+AGG - tig0020422:120782-120801 None:intergenic 20.0%
!!! CCTTTTCTTATATATAAAAC+TGG + tig0020422:120779-120798 Msa1381140:intron 20.0%
!!! CAGTTATTTGTTTTTTTTTC+AGG - tig0020422:121054-121073 None:intergenic 20.0%
!!! AACAATTATAGTTTTGAAGA+GGG - tig0020422:121161-121180 None:intergenic 20.0%
!!! AAACAATTATAGTTTTGAAG+AGG - tig0020422:121162-121181 None:intergenic 20.0%
!!! TTCATCTTATTAGTTTTTCA+GGG + tig0020422:121619-121638 Msa1381140:intron 20.0%
!! TCAAATGCAATTAAGAAAAA+GGG - tig0020422:122127-122146 None:intergenic 20.0%
!! TTCAAATGCAATTAAGAAAA+AGG - tig0020422:122128-122147 None:intergenic 20.0%
!! TAATACTTACTAGACAAAAA+GGG - tig0020422:122200-122219 None:intergenic 20.0%
!! ATAATACTTACTAGACAAAA+AGG - tig0020422:122201-122220 None:intergenic 20.0%
!! TCAAATTAAATATGCATTCA+GGG + tig0020422:122797-122816 Msa1381140:intron 20.0%
!! TAGATATATGAAACTGAAAA+TGG + tig0020422:123074-123093 Msa1381140:intron 20.0%
!! TATGATTCAAGATATGTTAT+GGG + tig0020422:123133-123152 Msa1381140:CDS 20.0%
!! AAAATTAAATGAAATGTTGC+AGG - tig0020422:123453-123472 None:intergenic 20.0%
!! AAGCTAAAGAAATATAATCA+AGG - tig0020422:123526-123545 None:intergenic 20.0%
!! TTGATTCTTTCTCTAATTAT+TGG + tig0020422:123557-123576 Msa1381140:intron 20.0%
!! AAATCTGATTCTATTATATG+GGG - tig0020422:123621-123640 None:intergenic 20.0%
!! GAAAATCTGATTCTATTATA+TGG - tig0020422:123623-123642 None:intergenic 20.0%
!! TCCTTCAAAAAAAAAAATCA+TGG + tig0020422:123686-123705 Msa1381140:intron 20.0%
!!! ACCATGATTTTTTTTTTTGA+AGG - tig0020422:123690-123709 None:intergenic 20.0%
!!! TTAACAACTGTTAATTTTAG+TGG - tig0020422:123724-123743 None:intergenic 20.0%
!!! TTTTTCAAAATATACATGCA+TGG + tig0020422:124054-124073 Msa1381140:intron 20.0%
!!! GACTTTCTTTAATTTTTGTT+TGG + tig0020422:124736-124755 Msa1381140:intron 20.0%
!! CATAATTTATAATTACCAAG+AGG - tig0020422:125180-125199 None:intergenic 20.0%
!!! TGAATGTTTTTGTTACAAAA+AGG + tig0020422:125224-125243 Msa1381140:intron 20.0%
!! TAGTATATAAAATTGATGGA+AGG - tig0020422:125355-125374 None:intergenic 20.0%
!! AAATTAAAAAATGCAACTAC+AGG + tig0020422:125408-125427 Msa1381140:intron 20.0%
!!! AGGTGTCGTTAATATTATTA+AGG + tig0020422:115608-115627 Msa1381140:five_prime_UTR 25.0%
! AGAGAATAAAGAAAAAGATG+TGG + tig0020422:115680-115699 Msa1381140:exon 25.0%
! ATTTCTGTGAATAACTTCAT+AGG + tig0020422:115736-115755 Msa1381140:CDS 25.0%
!! TTTGATGGAGAATCTATTTT+TGG - tig0020422:115842-115861 None:intergenic 25.0%
!!! TCTGGATTTTCTAGTTATTT+AGG - tig0020422:116033-116052 None:intergenic 25.0%
! ACAATGCATTAATATATGCA+AGG + tig0020422:116262-116281 Msa1381140:intron 25.0%
!!! AATGCTTTTTTTTTTTGTCG+GGG - tig0020422:116301-116320 None:intergenic 25.0%
! TAATCAAAGTAATTAGCTAG+TGG + tig0020422:116350-116369 Msa1381140:intron 25.0%
!!! TTGTTTCTGTTTTGGATATA+GGG - tig0020422:116829-116848 None:intergenic 25.0%
!!! TTTGTTTCTGTTTTGGATAT+AGG - tig0020422:116830-116849 None:intergenic 25.0%
!!! TGTAAAAAGTTTTCAAGTCA+TGG + tig0020422:117060-117079 Msa1381140:intron 25.0%
! AATGTGATATATTTACCTGA+TGG + tig0020422:117569-117588 Msa1381140:intron 25.0%
!!! TGTTGATAGAAAATTTTACG+GGG + tig0020422:117840-117859 Msa1381140:intron 25.0%
!! ACAAGATGTTAAGTGTTTTA+TGG - tig0020422:118353-118372 None:intergenic 25.0%
!!! TTTTATTTTATTTCGGTCCA+CGG + tig0020422:118520-118539 Msa1381140:intron 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG + tig0020422:118711-118730 Msa1381140:intron 25.0%
!!! AAACTTGTTCTTTTCTATCT+AGG - tig0020422:118711-118730 None:intergenic 25.0%
! ATATAACTTCTGTAACATCA+AGG - tig0020422:119257-119276 None:intergenic 25.0%
! AACACATATATCTAACTCTA+AGG - tig0020422:119531-119550 None:intergenic 25.0%
! AATTACATCATTCTCTCTTA+AGG - tig0020422:119800-119819 None:intergenic 25.0%
! AGAGAGAAATAGAGATAAAA+TGG + tig0020422:119891-119910 Msa1381140:intron 25.0%
! AATGGAATGTTGAATATATG+TGG + tig0020422:119909-119928 Msa1381140:intron 25.0%
! ATGGAATGTTGAATATATGT+GGG + tig0020422:119910-119929 Msa1381140:intron 25.0%
! TGAATTTATGGTTAAAGAGA+TGG + tig0020422:120053-120072 Msa1381140:intron 25.0%
!!! ATTAGTTTTTTCTCTTTGTC+AGG - tig0020422:120096-120115 None:intergenic 25.0%
!! TCCAATGTCATTTCTAAATA+TGG + tig0020422:120439-120458 Msa1381140:intron 25.0%
! ACCATATTTAGAAATGACAT+TGG - tig0020422:120443-120462 None:intergenic 25.0%
!! CATTGATTACAACAATAAGA+AGG + tig0020422:120563-120582 Msa1381140:CDS 25.0%
! ATGGTTGAACAAAAAACAAA+GGG - tig0020422:120651-120670 None:intergenic 25.0%
! AATGGTTGAACAAAAAACAA+AGG - tig0020422:120652-120671 None:intergenic 25.0%
!!! TTTGTTTTTTGTTCAACCAT+TGG + tig0020422:120651-120670 Msa1381140:CDS 25.0%
! AGTTTCAATCGAATATCAAA+GGG - tig0020422:120687-120706 None:intergenic 25.0%
!! CTCTTTTGTATAAAGATCAA+AGG - tig0020422:120711-120730 None:intergenic 25.0%
! ACTAATTACTATATGCATAC+AGG + tig0020422:120858-120877 Msa1381140:intron 25.0%
! AACATAAGAAGGAAATTGTT+CGG + tig0020422:120929-120948 Msa1381140:CDS 25.0%
! ATTTGATCTCAATTATTCTG+AGG - tig0020422:121025-121044 None:intergenic 25.0%
! TAACTGTAATCCTAACAAAT+TGG + tig0020422:121068-121087 Msa1381140:intron 25.0%
! AACTGTAATCCTAACAAATT+GGG + tig0020422:121069-121088 Msa1381140:intron 25.0%
!! TATGATTATCCCAATTTGTT+AGG - tig0020422:121081-121100 None:intergenic 25.0%
! TTAACATAACTGAATGAGTT+AGG + tig0020422:121104-121123 Msa1381140:intron 25.0%
!!! ACAATTATAGTTTTGAAGAG+GGG - tig0020422:121160-121179 None:intergenic 25.0%
! TATATATATAGCAAGGAGTA+GGG - tig0020422:121285-121304 None:intergenic 25.0%
! TATATATAAGCACTTCATTG+AGG + tig0020422:121307-121326 Msa1381140:intron 25.0%
! TTCATTGATACCATGTTATA+TGG - tig0020422:121480-121499 None:intergenic 25.0%
!!! GTTCATCTTATTAGTTTTTC+AGG + tig0020422:121618-121637 Msa1381140:intron 25.0%
! AGTAATTGCTAAAAACTACA+AGG + tig0020422:121657-121676 Msa1381140:intron 25.0%
!! AAGGATGTTTATTTAGGTTT+AGG - tig0020422:121691-121710 None:intergenic 25.0%
! AGTGTAAAGGATGTTTATTT+AGG - tig0020422:121697-121716 None:intergenic 25.0%
! CAATGTTTGAATTTGATGAA+TGG + tig0020422:121832-121851 Msa1381140:intron 25.0%
!!! AATTTGATGAATGGTGTTAT+AGG + tig0020422:121841-121860 Msa1381140:intron 25.0%
! AATTAAATAGCACACTAACT+AGG + tig0020422:121920-121939 Msa1381140:intron 25.0%
!! ACTAGGATCAATTTAAGTTT+AGG + tig0020422:121937-121956 Msa1381140:intron 25.0%
!!! GGTGAAATAATCTTTTTTTG+CGG + tig0020422:121998-122017 Msa1381140:intron 25.0%
! AATAACTTATATGCGAATTG+TGG + tig0020422:122077-122096 Msa1381140:intron 25.0%
! CAAATGCAATTAAGAAAAAG+GGG - tig0020422:122126-122145 None:intergenic 25.0%
!!! ATGCATATTTAATTTGACCA+AGG - tig0020422:122794-122813 None:intergenic 25.0%
! GTCAAATTAAATATGCATTC+AGG + tig0020422:122796-122815 Msa1381140:intron 25.0%
! CATAACATATCTTGAATCAT+AGG - tig0020422:123134-123153 None:intergenic 25.0%
! CTATGATTCAAGATATGTTA+TGG + tig0020422:123132-123151 Msa1381140:CDS 25.0%
! ATGATTCAAGATATGTTATG+GGG + tig0020422:123134-123153 Msa1381140:CDS 25.0%
! TTTATTCATTCAACCAACTA+AGG + tig0020422:123427-123446 Msa1381140:intron 25.0%
! GTGTTCATTGTGAAATTAAT+AGG + tig0020422:124505-124524 Msa1381140:intron 25.0%
! TTCAATGAAATGAATTGCTT+TGG - tig0020422:124625-124644 None:intergenic 25.0%
! GTTTAACACAATAGATCATT+AGG - tig0020422:124712-124731 None:intergenic 25.0%
! AAGTTTGAACTAAATTTGCA+CGG - tig0020422:125085-125104 None:intergenic 25.0%
!! AAATTTAGTTCAAACTTCGT+GGG + tig0020422:125088-125107 Msa1381140:CDS 25.0%
! TGATTATTAACTTCATTCCA+CGG - tig0020422:125275-125294 None:intergenic 25.0%
! GTTAATAATCAATTCACAGA+TGG + tig0020422:125284-125303 Msa1381140:CDS 25.0%
!! TTTCCGAATTTTGTATTTTC+TGG + tig0020422:125636-125655 Msa1381140:three_prime_UTR 25.0%
! TTTGTAAAAAAACTGTCGAT+TGG + tig0020422:125662-125681 Msa1381140:three_prime_UTR 25.0%
! TCTTTCTTCAAGAATATCAT+CGG + tig0020422:125701-125720 Msa1381140:three_prime_UTR 25.0%
!! TAACTTATTCCTTTTCAGAA+AGG + tig0020422:125760-125779 Msa1381140:three_prime_UTR 25.0%
!! TATATATTGCCTTTCTGAAA+AGG - tig0020422:125772-125791 None:intergenic 25.0%
AGAAAATCCAGAGTTCAAAA+TGG + tig0020422:116041-116060 Msa1381140:intron 30.0%
GAAAATCCAGAGTTCAAAAT+GGG + tig0020422:116042-116061 Msa1381140:intron 30.0%
CATTAATATATGCAAGGTCT+GGG + tig0020422:116268-116287 Msa1381140:intron 30.0%
ATTAATATATGCAAGGTCTG+GGG + tig0020422:116269-116288 Msa1381140:intron 30.0%
!!! GCTTGTTTTTACTTATTTGG+TGG - tig0020422:116472-116491 None:intergenic 30.0%
TTATCGTATGCTACTATCAT+AGG - tig0020422:116516-116535 None:intergenic 30.0%
AAAATTGCTCTTCTTTCATC+TGG - tig0020422:116686-116705 None:intergenic 30.0%
GACAATGCATTAAATATGCA+AGG - tig0020422:116745-116764 None:intergenic 30.0%
!!! GTGTTGTTTTGTTTCTGTTT+TGG - tig0020422:116837-116856 None:intergenic 30.0%
!! TGAAGGAGAACACTTTATTT+TGG - tig0020422:117192-117211 None:intergenic 30.0%
! GTTGATATTTTTCTACCATC+AGG - tig0020422:117587-117606 None:intergenic 30.0%
!!! CTAAAAAGTGTGGTTTTGTA+AGG - tig0020422:117762-117781 None:intergenic 30.0%
TTTGGTCTCAAAATGTTTGA+AGG - tig0020422:117786-117805 None:intergenic 30.0%
! AAAATTTCCGTCTGAAACTT+TGG - tig0020422:117804-117823 None:intergenic 30.0%
TATGTACTCATCTTAACGTA+CGG - tig0020422:118068-118087 None:intergenic 30.0%
! AAAAAAGACCTGCATGTTTT+TGG - tig0020422:118277-118296 None:intergenic 30.0%
!!! GTCTTTTTTCTCACCATTTT+TGG + tig0020422:118288-118307 Msa1381140:intron 30.0%
AGATTAGGTTTGAAGAATTG+TGG + tig0020422:118389-118408 Msa1381140:intron 30.0%
!!! TTTATTTTATTTCGGTCCAC+GGG + tig0020422:118521-118540 Msa1381140:intron 30.0%
TAAAAGAAATAACAAACCCG+TGG - tig0020422:118540-118559 None:intergenic 30.0%
CGACAAACCTATCAAAATAA+GGG - tig0020422:118875-118894 None:intergenic 30.0%
CCAACAAACTTGTGAAAATA+GGG - tig0020422:118845-118864 None:intergenic 30.0%
ACCAACAAACTTGTGAAAAT+AGG - tig0020422:118844-118863 None:intergenic 30.0%
ACCAACAAACTTGTGAAAAT+AGG + tig0020422:118844-118863 Msa1381140:intron 30.0%
CCAACAAACTTGTGAAAATA+GGG + tig0020422:118845-118864 Msa1381140:intron 30.0%
CGACAAACCTATCAAAATAA+GGG + tig0020422:118875-118894 Msa1381140:intron 30.0%
CTACATAAGTTCTGCTTATA+TGG + tig0020422:118969-118988 Msa1381140:intron 30.0%
!!! TTTTATTTTATTTCGGCCCA+CGG - tig0020422:119012-119031 None:intergenic 30.0%
CAACTTTCATTGCATTCATT+CGG + tig0020422:119169-119188 Msa1381140:intron 30.0%
! GTCATAGTCCTAATTACTTT+TGG - tig0020422:119420-119439 None:intergenic 30.0%
! AAACCGTATTGGATACTTTT+GGG - tig0020422:119455-119474 None:intergenic 30.0%
! TAAACCGTATTGGATACTTT+TGG - tig0020422:119456-119475 None:intergenic 30.0%
ATGTGTTACGTTCATTTACT+TGG + tig0020422:119544-119563 Msa1381140:intron 30.0%
TGGAATGTTGAATATATGTG+GGG + tig0020422:119911-119930 Msa1381140:intron 30.0%
TTGAATATATGTGGGGAAAA+TGG + tig0020422:119918-119937 Msa1381140:intron 30.0%
TGAATATATGTGGGGAAAAT+GGG + tig0020422:119919-119938 Msa1381140:intron 30.0%
ATTTATGGTTAAAGAGATGG+AGG + tig0020422:120056-120075 Msa1381140:intron 30.0%
ATATAACAGTTGTCATTGGA+AGG + tig0020422:120133-120152 Msa1381140:intron 30.0%
AGAGAAGAAGATATCATAAC+AGG + tig0020422:120535-120554 Msa1381140:CDS 30.0%
GAGAAGAAGATATCATAACA+GGG + tig0020422:120536-120555 Msa1381140:CDS 30.0%
AGAAGAAGATATCATAACAG+GGG + tig0020422:120537-120556 Msa1381140:CDS 30.0%
GAGTTTCAATCGAATATCAA+AGG - tig0020422:120688-120707 None:intergenic 30.0%
TACTATATGCATACAGGTAA+TGG + tig0020422:120864-120883 Msa1381140:intron 30.0%
ACAATTTCCTTCTTATGTTG+AGG - tig0020422:120928-120947 None:intergenic 30.0%
TCGGTATTTATATAATCACC+AGG + tig0020422:120948-120967 Msa1381140:CDS 30.0%
TGCATGATTTACATAATACC+TGG - tig0020422:120969-120988 None:intergenic 30.0%
!!! CAATTATAGTTTTGAAGAGG+GGG - tig0020422:121159-121178 None:intergenic 30.0%
! ACATTGTCTGAAGCAAAATA+GGG - tig0020422:121250-121269 None:intergenic 30.0%
! AACATTGTCTGAAGCAAAAT+AGG - tig0020422:121251-121270 None:intergenic 30.0%
ATATATATAGCAAGGAGTAG+GGG - tig0020422:121284-121303 None:intergenic 30.0%
GTATATATATAGCAAGGAGT+AGG - tig0020422:121286-121305 None:intergenic 30.0%
TGTCTATTGTTTAGTGAAGA+TGG - tig0020422:121394-121413 None:intergenic 30.0%
ACTATCTCTTCCATATAACA+TGG + tig0020422:121467-121486 Msa1381140:intron 30.0%
!!! ATTAGTTTTTCAGGGAGAAT+AGG + tig0020422:121627-121646 Msa1381140:intron 30.0%
TTCTTTGTGATAGAGTGTAA+AGG - tig0020422:121710-121729 None:intergenic 30.0%
!! CACAAAGAAAGCATCATAAT+AGG + tig0020422:121721-121740 Msa1381140:intron 30.0%
CACAAACATTGCAAAACTTT+GGG - tig0020422:121752-121771 None:intergenic 30.0%
TCACAAACATTGCAAAACTT+TGG - tig0020422:121753-121772 None:intergenic 30.0%
AGGATTAAGCTAATTGTGTA+AGG + tig0020422:121957-121976 Msa1381140:intron 30.0%
TAAGCTAATTGTGTAAGGTT+TGG + tig0020422:121962-121981 Msa1381140:intron 30.0%
AATTAATGCAAGGAAGTCTT+AGG - tig0020422:122153-122172 None:intergenic 30.0%
TCAACTCATCGATAAAATGA+TGG + tig0020422:122232-122251 Msa1381140:intron 30.0%
TTGACAGTATATGACTTTCT+TGG - tig0020422:122267-122286 None:intergenic 30.0%
TTTCAATACCATTTGTGATG+AGG + tig0020422:122316-122335 Msa1381140:intron 30.0%
TAAGCAATCACGCTATATAT+AGG + tig0020422:122614-122633 Msa1381140:intron 30.0%
ATGGTTGCATATAGAAGTTA+AGG - tig0020422:122757-122776 None:intergenic 30.0%
TTCCCATATAGATATGACAT+GGG - tig0020422:122856-122875 None:intergenic 30.0%
ATTTGATTAGGTCAGTGATA+GGG - tig0020422:122891-122910 None:intergenic 30.0%
AACCTTATGATCAAATCAAC+TGG + tig0020422:122935-122954 Msa1381140:CDS 30.0%
!! TTCCAGTTGATTTGATCATA+AGG - tig0020422:122940-122959 None:intergenic 30.0%
AAACCTTAGCAATAGTATTC+CGG - tig0020422:122969-122988 None:intergenic 30.0%
TATCTTGAATCATAGGATGT+GGG - tig0020422:123127-123146 None:intergenic 30.0%
ATATCTTGAATCATAGGATG+TGG - tig0020422:123128-123147 None:intergenic 30.0%
GAGAAAGAATCAACTAAGAA+AGG - tig0020422:123550-123569 None:intergenic 30.0%
TCTAATTATTGGAACTGACT+AGG + tig0020422:123568-123587 Msa1381140:intron 30.0%
TAATAATGAATGCAGAGCTT+TGG + tig0020422:123748-123767 Msa1381140:intron 30.0%
AATAATGAATGCAGAGCTTT+GGG + tig0020422:123749-123768 Msa1381140:intron 30.0%
ATATTCATGAAAACACATGC+AGG + tig0020422:124086-124105 Msa1381140:intron 30.0%
TGATCTTGTTGGAGAAAAAT+TGG + tig0020422:124137-124156 Msa1381140:CDS 30.0%
! AACCAACTGTAAGAATTTTG+AGG - tig0020422:124240-124259 None:intergenic 30.0%
AAATTCTTACAGTTGGTTAG+AGG + tig0020422:124242-124261 Msa1381140:CDS 30.0%
!! TGAAATGAATTGCTTTGGAA+AGG - tig0020422:124620-124639 None:intergenic 30.0%
TAACACAATAGATCATTAGG+TGG - tig0020422:124709-124728 None:intergenic 30.0%
! AAATTGACAAGCTTTTTGCA+AGG - tig0020422:124904-124923 None:intergenic 30.0%
TTATTTGTCAAGCCAAAACA+AGG + tig0020422:124965-124984 Msa1381140:CDS 30.0%
! CAAATTTAGTTCAAACTTCG+TGG + tig0020422:125087-125106 Msa1381140:CDS 30.0%
ATTTATAATTACCAAGAGGC+AGG - tig0020422:125176-125195 None:intergenic 30.0%
!! AGATAACAGGAGTATTTATG+AGG + tig0020422:125431-125450 Msa1381140:CDS 30.0%
TAGTGAGTAGTTACAATTCA+AGG - tig0020422:125559-125578 None:intergenic 30.0%
CTGCCAGAAAATACAAAATT+CGG - tig0020422:125642-125661 None:intergenic 30.0%
AAGAACATGCTGAGATTGAA+AGG + tig0020422:115800-115819 Msa1381140:CDS 35.0%
! CATTTTTAACAAGTGCCCTT+AGG - tig0020422:116087-116106 None:intergenic 35.0%
GCATTAATATATGCAAGGTC+TGG + tig0020422:116267-116286 Msa1381140:intron 35.0%
AAGAGTCCTGTGATACAAAA+TGG + tig0020422:116440-116459 Msa1381140:intron 35.0%
! ATAGGCTTTTGTTAGATGAG+TGG - tig0020422:116498-116517 None:intergenic 35.0%
GGAAATGAGCAAAATCAGAT+GGG - tig0020422:116549-116568 None:intergenic 35.0%
TGGAAATGAGCAAAATCAGA+TGG - tig0020422:116550-116569 None:intergenic 35.0%
GTCAATTAACTCACGTTAAG+TGG - tig0020422:116570-116589 None:intergenic 35.0%
!!! TTATTTTTTTTGGTGGTGGC+CGG + tig0020422:116704-116723 Msa1381140:intron 35.0%
CATTAAATATGCAAGGTACG+AGG - tig0020422:116738-116757 None:intergenic 35.0%
AACACCAGACAGAATAAAAG+CGG + tig0020422:116852-116871 Msa1381140:intron 35.0%
TGAATTGGATACCAAGTATG+AGG - tig0020422:117218-117237 None:intergenic 35.0%
GTTTGAAGGACTAAAAAGTG+TGG - tig0020422:117772-117791 None:intergenic 35.0%
! TTTGAGACCAAAGTTTCAGA+CGG + tig0020422:117794-117813 Msa1381140:intron 35.0%
CATAACTAGATTGCGTTACT+TGG + tig0020422:118089-118108 Msa1381140:intron 35.0%
TCTTTATCCTATGAAGTCGA+TGG - tig0020422:118176-118195 None:intergenic 35.0%
ACACGATCTAGTTAATCTAG+GGG - tig0020422:118214-118233 None:intergenic 35.0%
GACACGATCTAGTTAATCTA+GGG - tig0020422:118215-118234 None:intergenic 35.0%
TCGTGTCCTTTAGTGATTTA+TGG + tig0020422:118228-118247 Msa1381140:intron 35.0%
ATCATTCTCCAAAAACATGC+AGG + tig0020422:118266-118285 Msa1381140:intron 35.0%
GTAACTTTACGTGCCAAAAA+TGG - tig0020422:118304-118323 None:intergenic 35.0%
ATTGTGGAAGAGATATAGCA+AGG + tig0020422:118405-118424 Msa1381140:intron 35.0%
TTGTGGAAGAGATATAGCAA+GGG + tig0020422:118406-118425 Msa1381140:intron 35.0%
! AATCAAAAAGTGTGCCTCTT+AGG - tig0020422:118946-118965 None:intergenic 35.0%
! AGATTTTCTCTCAATTCTCG+TGG + tig0020422:118621-118640 Msa1381140:intron 35.0%
CCTATCAAAATAAGGGTTTC+CGG - tig0020422:118882-118901 None:intergenic 35.0%
GCGACAAACCTATCAAAATA+AGG - tig0020422:118874-118893 None:intergenic 35.0%
! CCCTATTTTCACAAGTTTGT+TGG + tig0020422:118684-118703 Msa1381140:intron 35.0%
! CCCTATTTTCACAAGTTTGT+TGG - tig0020422:118684-118703 None:intergenic 35.0%
GCGACAAACCTATCAAAATA+AGG + tig0020422:118874-118893 Msa1381140:intron 35.0%
!!! CTGGAAACCCTTATTTTGAT+AGG - tig0020422:118885-118904 None:intergenic 35.0%
! AGATTTTCTCTCAATTCTGG+TGG - tig0020422:118911-118930 None:intergenic 35.0%
! TCGAGATTTTCTCTCAATTC+TGG - tig0020422:118618-118637 None:intergenic 35.0%
! AATCAAAAAGTGTGCCTCTT+AGG + tig0020422:118946-118965 Msa1381140:intron 35.0%
TGAAAGAAATAACAAACCCG+TGG + tig0020422:118992-119011 Msa1381140:intron 35.0%
GAAAGAAATAACAAACCCGT+GGG + tig0020422:118993-119012 Msa1381140:intron 35.0%
!!! TTTATTTTATTTCGGCCCAC+GGG - tig0020422:119011-119030 None:intergenic 35.0%
TAATAAAACCCTCTTGCATC+AGG + tig0020422:119100-119119 Msa1381140:intron 35.0%
AATAAAACCCTCTTGCATCA+GGG + tig0020422:119101-119120 Msa1381140:intron 35.0%
!! GTTGAATTGATAGTGCAACA+TGG - tig0020422:119153-119172 None:intergenic 35.0%
TACTTATTTCGGTATCACAG+TGG + tig0020422:119209-119228 Msa1381140:intron 35.0%
TAACTTCTGTAACATCAAGG+TGG - tig0020422:119254-119273 None:intergenic 35.0%
!! TACTTTTGGGAGTCTATTGT+GGG - tig0020422:119442-119461 None:intergenic 35.0%
!! ATACTTTTGGGAGTCTATTG+TGG - tig0020422:119443-119462 None:intergenic 35.0%
!! ACTCCCAAAAGTATCCAATA+CGG + tig0020422:119449-119468 Msa1381140:intron 35.0%
CCAAAAAGCTTAAACCGTAT+TGG - tig0020422:119466-119485 None:intergenic 35.0%
! CCAATACGGTTTAAGCTTTT+TGG + tig0020422:119463-119482 Msa1381140:intron 35.0%
ACCAAACACATTAGTATTCG+AGG + tig0020422:120008-120027 Msa1381140:intron 35.0%
TCCTCGAATACTAATGTGTT+TGG - tig0020422:120012-120031 None:intergenic 35.0%
AAACACATTAGTATTCGAGG+AGG + tig0020422:120011-120030 Msa1381140:intron 35.0%
! TCTCAACTGGGTTGAATTTA+TGG + tig0020422:120041-120060 Msa1381140:intron 35.0%
ACAAATATCAATACGTCCAG+TGG - tig0020422:120837-120856 None:intergenic 35.0%
CTATAATTGTTTGTCGACAC+TGG + tig0020422:121170-121189 Msa1381140:intron 35.0%
! ATTGTCTGAAGCAAAATAGG+GGG - tig0020422:121248-121267 None:intergenic 35.0%
! CATTGTCTGAAGCAAAATAG+GGG - tig0020422:121249-121268 None:intergenic 35.0%
AACATCTTTGATTCTGAGCA+GGG - tig0020422:121362-121381 None:intergenic 35.0%
TATCTATGTTACCGATGTGA+AGG - tig0020422:121448-121467 None:intergenic 35.0%
! AACTATATGTGTTTCTGCCA+AGG + tig0020422:121557-121576 Msa1381140:intron 35.0%
! TGTCTTGAATTTTGAGCTGT+GGG - tig0020422:121802-121821 None:intergenic 35.0%
! ATGTCTTGAATTTTGAGCTG+TGG - tig0020422:121803-121822 None:intergenic 35.0%
ACTTATATGCGAATTGTGGT+CGG + tig0020422:122081-122100 Msa1381140:intron 35.0%
CATGTGTGGAAATTAATGCA+AGG - tig0020422:122163-122182 None:intergenic 35.0%
! TCTTTTGTGTGAATCATGTG+TGG - tig0020422:122177-122196 None:intergenic 35.0%
! CTCATCGATAAAATGATGGA+AGG + tig0020422:122236-122255 Msa1381140:intron 35.0%
TTTAGTGGCTATTCCATCAT+GGG + tig0020422:122503-122522 Msa1381140:CDS 35.0%
TCACGCTATATATAGGTACT+TGG + tig0020422:122621-122640 Msa1381140:intron 35.0%
TTTGGTAGAAACCAGAATTC+TGG - tig0020422:122681-122700 None:intergenic 35.0%
ACCTAGGTCCTACATTAATT+TGG + tig0020422:122727-122746 Msa1381140:intron 35.0%
CCTAGGTCCTACATTAATTT+GGG + tig0020422:122728-122747 Msa1381140:intron 35.0%
! CTAGGTCCTACATTAATTTG+GGG + tig0020422:122729-122748 Msa1381140:intron 35.0%
AAGGAACCCCAAATTAATGT+AGG - tig0020422:122738-122757 None:intergenic 35.0%
! CAAGGCATTAGACAAGATAA+TGG - tig0020422:122776-122795 None:intergenic 35.0%
CATTATCTTGTCTAATGCCT+TGG + tig0020422:122774-122793 Msa1381140:intron 35.0%
ATGCCCATGTCATATCTATA+TGG + tig0020422:122850-122869 Msa1381140:CDS 35.0%
TGCCCATGTCATATCTATAT+GGG + tig0020422:122851-122870 Msa1381140:CDS 35.0%
CTTCCCATATAGATATGACA+TGG - tig0020422:122857-122876 None:intergenic 35.0%
TCTATATGGGAAGAAGTTTG+TGG + tig0020422:122864-122883 Msa1381140:CDS 35.0%
CTATATGGGAAGAAGTTTGT+GGG + tig0020422:122865-122884 Msa1381140:CDS 35.0%
GATTTGATTAGGTCAGTGAT+AGG - tig0020422:122892-122911 None:intergenic 35.0%
CTTCTCTCAGTGATTTGATT+AGG - tig0020422:122903-122922 None:intergenic 35.0%
AACCTTAGCAATAGTATTCC+GGG - tig0020422:122968-122987 None:intergenic 35.0%
TGAAAATGGCATGCAATTTC+AGG + tig0020422:123088-123107 Msa1381140:intron 35.0%
ATGGGGATTTCTTTATCATG+TGG + tig0020422:123151-123170 Msa1381140:CDS 35.0%
TGGGGATTTCTTTATCATGT+GGG + tig0020422:123152-123171 Msa1381140:CDS 35.0%
AATTAATCATGTGCGTTACG+AGG + tig0020422:123235-123254 Msa1381140:CDS 35.0%
AACAGTAGATACCTTTGCAT+TGG + tig0020422:123263-123282 Msa1381140:CDS 35.0%
!! TATTATGTTTGATAGCGCGT+TGG + tig0020422:123300-123319 Msa1381140:CDS 35.0%
!! ATTATGTTTGATAGCGCGTT+GGG + tig0020422:123301-123320 Msa1381140:CDS 35.0%
ATGTACAGACACATATGCAA+AGG + tig0020422:123916-123935 Msa1381140:CDS 35.0%
AAAATGCCAACTGATCTTGT+TGG + tig0020422:124126-124145 Msa1381140:CDS 35.0%
! TTTTCTCCAACAAGATCAGT+TGG - tig0020422:124135-124154 None:intergenic 35.0%
AGCCTCAAAATTCTTACAGT+TGG + tig0020422:124235-124254 Msa1381140:CDS 35.0%
CATGCATGCATAGAATTAGT+TGG - tig0020422:124337-124356 None:intergenic 35.0%
GTGTCTTCAAAGAATTCAGT+TGG - tig0020422:124379-124398 None:intergenic 35.0%
!! TAGCTTTGTGAAGAGATACA+GGG - tig0020422:124562-124581 None:intergenic 35.0%
!! TTTCCTTAGCTCTATGAGTT+GGG - tig0020422:124587-124606 None:intergenic 35.0%
!! ATTTCCTTAGCTCTATGAGT+TGG - tig0020422:124588-124607 None:intergenic 35.0%
AGAGTAGAAGATAGAATACC+AGG - tig0020422:124670-124689 None:intergenic 35.0%
ATCAATTCACAGATGGAAGA+TGG + tig0020422:125291-125310 Msa1381140:CDS 35.0%
CTACACTAATTACCTGTTGT+GGG - tig0020422:125323-125342 None:intergenic 35.0%
TCGATATGATGAGTAGTTCA+GGG - tig0020422:125464-125483 None:intergenic 35.0%
TTCGATATGATGAGTAGTTC+AGG - tig0020422:125465-125484 None:intergenic 35.0%
ATCGAAACATCTTTCCCATA+TGG + tig0020422:125479-125498 Msa1381140:CDS 35.0%
TCGAAACATCTTTCCCATAT+GGG + tig0020422:125480-125499 Msa1381140:CDS 35.0%
TGGAAGTTGAAGATAGCAGA+AGG + tig0020422:115700-115719 Msa1381140:CDS 40.0%
AAGTTGAAGATAGCAGAAGG+AGG + tig0020422:115703-115722 Msa1381140:CDS 40.0%
TGGGAATTTGATCCAAATGC+AGG + tig0020422:115769-115788 Msa1381140:CDS 40.0%
TCAATCTCAGCATGTTCTTG+TGG - tig0020422:115799-115818 None:intergenic 40.0%
! GAGGTCAGAACTTTGTTTGA+TGG - tig0020422:115857-115876 None:intergenic 40.0%
ATACCTGCATTCTCATCAAG+AGG - tig0020422:115876-115895 None:intergenic 40.0%
! GCATAACCCATTTTGAACTC+TGG - tig0020422:116051-116070 None:intergenic 40.0%
TGCTATCAAGAGATGACCTA+AGG + tig0020422:116068-116087 Msa1381140:intron 40.0%
GCTATCAAGAGATGACCTAA+GGG + tig0020422:116069-116088 Msa1381140:intron 40.0%
!! TCTGCTCTCATTGAGTTGAT+TGG - tig0020422:116412-116431 None:intergenic 40.0%
ATCAACTCAATGAGAGCAGA+CGG + tig0020422:116412-116431 Msa1381140:intron 40.0%
!!! CTTCTGCCATTTTGTATCAC+AGG - tig0020422:116449-116468 None:intergenic 40.0%
!! CTCATGCTCAGCTATTTTGA+TGG + tig0020422:116648-116667 Msa1381140:intron 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG + tig0020422:116705-116724 Msa1381140:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG - tig0020422:116767-116786 None:intergenic 40.0%
TTCACAAGCCACTGTTATGT+AGG - tig0020422:116878-116897 None:intergenic 40.0%
TACCAAGTATGAGGCAATGA+AGG - tig0020422:117209-117228 None:intergenic 40.0%
ACGGGGACTTAAAATGCTAA+CGG + tig0020422:117857-117876 Msa1381140:intron 40.0%
CATCTTAACGTACGGTATTG+AGG - tig0020422:118060-118079 None:intergenic 40.0%
!! GTACTTACCATCGACTTCAT+AGG + tig0020422:118166-118185 Msa1381140:intron 40.0%
GGACACGATCTAGTTAATCT+AGG - tig0020422:118216-118235 None:intergenic 40.0%
TTGGCACGTAAAGTTACGTA+TGG + tig0020422:118307-118326 Msa1381140:intron 40.0%
TGTGGAAGAGATATAGCAAG+GGG + tig0020422:118407-118426 Msa1381140:intron 40.0%
CTCTTAGGCTACATAAGTTC+TGG - tig0020422:118961-118980 None:intergenic 40.0%
CAGAACTTATGTAGCCTAAG+AGG + tig0020422:118569-118588 Msa1381140:intron 40.0%
!!! CCGGAAACCCTTATTTTGAT+AGG + tig0020422:118647-118666 Msa1381140:intron 40.0%
CAGAACTTATGTAGCCTAAG+AGG - tig0020422:118569-118588 None:intergenic 40.0%
ATAAAACCCTCTTGCATCAG+GGG + tig0020422:119102-119121 Msa1381140:intron 40.0%
CAGTGGATATGTCAGAATCA+CGG + tig0020422:119226-119245 Msa1381140:intron 40.0%
GTTAAAGAGATGGAGGTTCA+AGG + tig0020422:120063-120082 Msa1381140:intron 40.0%
AGTTTAACTGCTGGTGGAAT+GGG - tig0020422:120514-120533 None:intergenic 40.0%
TCTTCTCTCAGTTTAACTGC+TGG - tig0020422:120523-120542 None:intergenic 40.0%
TCCTCAATTCAAGCTCATGA+TGG + tig0020422:120601-120620 Msa1381140:CDS 40.0%
! TTGCTGATATTGATGACCAC+TGG + tig0020422:120818-120837 Msa1381140:intron 40.0%
! TCTAGGACCTCAACATAAGA+AGG + tig0020422:120918-120937 Msa1381140:CDS 40.0%
AGGAATGCAAATGTGAGTGA+TGG - tig0020422:121207-121226 None:intergenic 40.0%
GGAAGGAGTCAAAGTAGAAA+AGG - tig0020422:121227-121246 None:intergenic 40.0%
GGCAAAAATCCCTTTAGATG+AGG + tig0020422:121328-121347 Msa1381140:intron 40.0%
ACATCTTTGATTCTGAGCAG+GGG - tig0020422:121361-121380 None:intergenic 40.0%
CAACATCTTTGATTCTGAGC+AGG - tig0020422:121363-121382 None:intergenic 40.0%
TAAAGCTGCTGCATAGACAT+AGG - tig0020422:121586-121605 None:intergenic 40.0%
!! AGCAGCTTTAGAGTATACAG+AGG + tig0020422:121596-121615 Msa1381140:intron 40.0%
GATCTGATATCAACTTCCTC+TGG + tig0020422:121771-121790 Msa1381140:intron 40.0%
AGGTTTGGATAGACTAAGTG+AGG + tig0020422:121977-121996 Msa1381140:intron 40.0%
TTCTGTCACCTCATCACAAA+TGG - tig0020422:122327-122346 None:intergenic 40.0%
TTGTGCTATGACCCTCTATA+TGG - tig0020422:122371-122390 None:intergenic 40.0%
CATTGAGCTATATTGCACTG+AGG + tig0020422:122403-122422 Msa1381140:CDS 40.0%
CAATGGAGAGATGCAGAAAT+TGG + tig0020422:122463-122482 Msa1381140:CDS 40.0%
AGAAATTGGATCCTTGACCA+TGG + tig0020422:122477-122496 Msa1381140:CDS 40.0%
GTTTAGTGGCTATTCCATCA+TGG + tig0020422:122502-122521 Msa1381140:CDS 40.0%
TTAGTGGCTATTCCATCATG+GGG + tig0020422:122504-122523 Msa1381140:CDS 40.0%
AGGTACTTGGAGTTTATGAG+TGG + tig0020422:122634-122653 Msa1381140:intron 40.0%
! GGATGAATAGGGGTGAATTT+TGG - tig0020422:122699-122718 None:intergenic 40.0%
AAATTCACCCCTATTCATCC+AGG + tig0020422:122699-122718 Msa1381140:CDS 40.0%
CCCAAATTAATGTAGGACCT+AGG - tig0020422:122731-122750 None:intergenic 40.0%
! GGAAAATGTTGTGCTACTGT+CGG + tig0020422:122818-122837 Msa1381140:CDS 40.0%
AAATCAACTGGAACAAAGCC+CGG + tig0020422:122947-122966 Msa1381140:CDS 40.0%
AAATGGCATGCAATTTCAGG+AGG + tig0020422:123091-123110 Msa1381140:intron 40.0%
AAAGGCCAGCAATTCAGAAA+AGG - tig0020422:123182-123201 None:intergenic 40.0%
! TTCTGTCTAAGCTTGGTGAA+AGG - tig0020422:123200-123219 None:intergenic 40.0%
TTTCACCAAGCTTAGACAGA+AGG + tig0020422:123199-123218 Msa1381140:CDS 40.0%
TAATGCCTTCTGTCTAAGCT+TGG - tig0020422:123207-123226 None:intergenic 40.0%
TCTCTACACTTCCAATGCAA+AGG - tig0020422:123277-123296 None:intergenic 40.0%
! TTGCATTGGAAGTGTAGAGA+AGG + tig0020422:123277-123296 Msa1381140:CDS 40.0%
AGTTTGTATGCCTCTGAGTT+CGG - tig0020422:123335-123354 None:intergenic 40.0%
AGAAGATGGCTTGAAAATCC+AGG + tig0020422:123391-123410 Msa1381140:CDS 40.0%
TGTAACGTGAGTGAAGAGTA+TGG + tig0020422:123817-123836 Msa1381140:CDS 40.0%
! AAGAGTATGGTCCTACACTT+CGG + tig0020422:123830-123849 Msa1381140:CDS 40.0%
! TGGATTTTCAACTACCTGTG+AGG - tig0020422:123878-123897 None:intergenic 40.0%
CAGGTAGTTGAAAATCCATC+CGG + tig0020422:123880-123899 Msa1381140:CDS 40.0%
! GTACATTGCTTTGAACTCAC+CGG - tig0020422:123902-123921 None:intergenic 40.0%
ACATTCTCAATGCATGACCA+AGG + tig0020422:123946-123965 Msa1381140:CDS 40.0%
TAAAACCTTGAGTCCTTCTG+CGG - tig0020422:123992-124011 None:intergenic 40.0%
! CATTTTTGACAACAGGAGTG+CGG - tig0020422:124112-124131 None:intergenic 40.0%
! CAGTTGGCATTTTTGACAAC+AGG - tig0020422:124119-124138 None:intergenic 40.0%
! TTGAAGACACACTGATTGAG+AGG + tig0020422:124389-124408 Msa1381140:CDS 40.0%
! TGAAGACACACTGATTGAGA+GGG + tig0020422:124390-124409 Msa1381140:CDS 40.0%
AATAGGTATGTTGAGTGCAC+TGG + tig0020422:124522-124541 Msa1381140:intron 40.0%
!! GTAGCTTTGTGAAGAGATAC+AGG - tig0020422:124563-124582 None:intergenic 40.0%
GAAAACACACAAAACCCTGA+TGG + tig0020422:124642-124661 Msa1381140:CDS 40.0%
TAGAATACCAGGATCCATCA+GGG - tig0020422:124659-124678 None:intergenic 40.0%
ATAGAATACCAGGATCCATC+AGG - tig0020422:124660-124679 None:intergenic 40.0%
TAGTACATACACTACTCCAC+AGG + tig0020422:124787-124806 Msa1381140:intron 40.0%
!! TGGGGAATTTGCTATACGTA+TGG + tig0020422:124819-124838 Msa1381140:CDS 40.0%
! TTTGCTATACGTATGGCACT+TGG + tig0020422:124826-124845 Msa1381140:CDS 40.0%
TTTGCAAGGAAGGACTGTTA+CGG - tig0020422:124890-124909 None:intergenic 40.0%
! TGACAAGCTTTTTGCAAGGA+AGG - tig0020422:124900-124919 None:intergenic 40.0%
TTGTCAAAGCAGCTTCCTAA+TGG + tig0020422:124927-124946 Msa1381140:CDS 40.0%
TGTCAAAGCAGCTTCCTAAT+GGG + tig0020422:124928-124947 Msa1381140:CDS 40.0%
AATTTGCACGGTTGTCTTCT+AGG - tig0020422:125073-125092 None:intergenic 40.0%
AACTTCATTCCACGGTGTAT+GGG - tig0020422:125267-125286 None:intergenic 40.0%
TAACTTCATTCCACGGTGTA+TGG - tig0020422:125268-125287 None:intergenic 40.0%
GCTACACTAATTACCTGTTG+TGG - tig0020422:125324-125343 None:intergenic 40.0%
ATGCAACTACAGGAGATAAC+AGG + tig0020422:125418-125437 Msa1381140:intron 40.0%
GAATTTGTGCAGACAAGACT+CGG - tig0020422:125525-125544 None:intergenic 40.0%
ACAATTCAAGGTGCAGCATT+TGG - tig0020422:125547-125566 None:intergenic 40.0%
ATTGTAACTACTCACTACCC+AGG + tig0020422:125562-125581 Msa1381140:three_prime_UTR 40.0%
TGTACAACCAATTAGCACCT+GGG - tig0020422:125582-125601 None:intergenic 40.0%
AAGATAGCAGAAGGAGGAGA+AGG + tig0020422:115709-115728 Msa1381140:CDS 45.0%
AGATAGCAGAAGGAGGAGAA+GGG + tig0020422:115710-115729 Msa1381140:CDS 45.0%
ACTTCATAGGACGTCAACAC+TGG + tig0020422:115749-115768 Msa1381140:CDS 45.0%
CTTCATAGGACGTCAACACT+GGG + tig0020422:115750-115769 Msa1381140:CDS 45.0%
TCTTGTGGTGTTCCTGCATT+TGG - tig0020422:115784-115803 None:intergenic 45.0%
TGACCTCTTGATGAGAATGC+AGG + tig0020422:115870-115889 Msa1381140:CDS 45.0%
! CGAGCTTAACTCAGTTGGTA+AGG + tig0020422:116239-116258 Msa1381140:intron 45.0%
TCAACTCAATGAGAGCAGAC+GGG + tig0020422:116413-116432 Msa1381140:intron 45.0%
!!! ATTTTTTTTGGTGGTGGCCG+GGG + tig0020422:116706-116725 Msa1381140:intron 45.0%
!!! TAGGCCGCTTTTATTCTGTC+TGG - tig0020422:116859-116878 None:intergenic 45.0%
AAAAGCGGCCTACATAACAG+TGG + tig0020422:116867-116886 Msa1381140:intron 45.0%
CTCCTTCATTGCCTCATACT+TGG + tig0020422:117204-117223 Msa1381140:intron 45.0%
!! ATATAGCAAGGGGTTGATGC+AGG + tig0020422:118417-118436 Msa1381140:intron 45.0%
CTCTCAATTCTCGTGGATTC+CGG + tig0020422:118628-118647 Msa1381140:intron 45.0%
! CAGTTGGTATCAGAGCAGTA+CGG - tig0020422:118762-118781 None:intergenic 45.0%
TGATACCAACTGACGCAGTA+CGG + tig0020422:118770-118789 Msa1381140:intron 45.0%
!! CTCTCAATTCTGGTGGATTC+TGG - tig0020422:118904-118923 None:intergenic 45.0%
! GGTTGTAGCATTTCGAGTCT+GGG - tig0020422:119132-119151 None:intergenic 45.0%
! TGGTTGTAGCATTTCGAGTC+TGG - tig0020422:119133-119152 None:intergenic 45.0%
AGGAGGTTGAGTATCTCAAC+TGG + tig0020422:120028-120047 Msa1381140:intron 45.0%
GGAGGTTGAGTATCTCAACT+GGG + tig0020422:120029-120048 Msa1381140:intron 45.0%
GTTTAACTGCTGGTGGAATG+GGG - tig0020422:120513-120532 None:intergenic 45.0%
CAGTTTAACTGCTGGTGGAA+TGG - tig0020422:120515-120534 None:intergenic 45.0%
TCTCTCAGTTTAACTGCTGG+TGG - tig0020422:120520-120539 None:intergenic 45.0%
GCCATCATGAGCTTGAATTG+AGG - tig0020422:120605-120624 None:intergenic 45.0%
AAAGGGACTTCACTCACCAA+TGG - tig0020422:120670-120689 None:intergenic 45.0%
GTAATGGCCCTCTATGTTAC+AGG + tig0020422:120880-120899 Msa1381140:CDS 45.0%
AGGTCCTAGAACCTCATCAA+GGG - tig0020422:120908-120927 None:intergenic 45.0%
!!! GTTTTGAAGAGGGGGATGAA+TGG - tig0020422:121151-121170 None:intergenic 45.0%
! TGCAAATGTGAGTGATGGTG+AGG - tig0020422:121202-121221 None:intergenic 45.0%
! TCTGAAGCAAAATAGGGGGA+AGG - tig0020422:121244-121263 None:intergenic 45.0%
GGAAGGGATCCTCATCTAAA+GGG - tig0020422:121340-121359 None:intergenic 45.0%
TTTGATTCTGAGCAGGGGAA+GGG - tig0020422:121356-121375 None:intergenic 45.0%
TACCGATGTGAAGGAGGATA+CGG - tig0020422:121439-121458 None:intergenic 45.0%
CTATGTTACCGATGTGAAGG+AGG - tig0020422:121445-121464 None:intergenic 45.0%
TGCATAGACATAGGCTACCT+TGG - tig0020422:121577-121596 None:intergenic 45.0%
ATGAGGTGACAGAACGAAGA+TGG + tig0020422:122333-122352 Msa1381140:intron 45.0%
!! ACAGAACGAAGATGGTGGAT+GGG + tig0020422:122341-122360 Msa1381140:intron 45.0%
TGGATGGGGATTCCATATAG+AGG + tig0020422:122356-122375 Msa1381140:CDS 45.0%
GGATGGGGATTCCATATAGA+GGG + tig0020422:122357-122376 Msa1381140:CDS 45.0%
GAGGGTCATAGCACAATGTT+TGG + tig0020422:122375-122394 Msa1381140:CDS 45.0%
TATATTGCACTGAGGCTGCT+TGG + tig0020422:122411-122430 Msa1381140:CDS 45.0%
ACCTGAAGATGGTGAAGACA+AGG + tig0020422:122440-122459 Msa1381140:CDS 45.0%
AGATGGTGAAGACAAGGCAA+TGG + tig0020422:122446-122465 Msa1381140:CDS 45.0%
AATTGGATCCTTGACCATGG+TGG + tig0020422:122480-122499 Msa1381140:CDS 45.0%
GAATAGCCACTAAACCACCA+TGG - tig0020422:122497-122516 None:intergenic 45.0%
TTCCATCATGGGGAAAGTTC+TGG + tig0020422:122514-122533 Msa1381140:CDS 45.0%
TCCATCATGGGGAAAGTTCT+GGG + tig0020422:122515-122534 Msa1381140:CDS 45.0%
ATCCACTTCCACCAGAATTC+TGG + tig0020422:122667-122686 Msa1381140:CDS 45.0%
AACCAGAATTCTGGTGGAAG+TGG - tig0020422:122672-122691 None:intergenic 45.0%
GGTAGAAACCAGAATTCTGG+TGG - tig0020422:122678-122697 None:intergenic 45.0%
GTATGCACCTGGATGAATAG+GGG - tig0020422:122709-122728 None:intergenic 45.0%
GGTATGCACCTGGATGAATA+GGG - tig0020422:122710-122729 None:intergenic 45.0%
AGGTATGCACCTGGATGAAT+AGG - tig0020422:122711-122730 None:intergenic 45.0%
ATTCATCCAGGTGCATACCT+AGG + tig0020422:122711-122730 Msa1381140:intron 45.0%
AGCCCGGAATACTATTGCTA+AGG + tig0020422:122963-122982 Msa1381140:CDS 45.0%
TGCTAAGGTTTGTACGTGTG+TGG + tig0020422:122978-122997 Msa1381140:intron 45.0%
! GAGAGCCTTTTCTGAATTGC+TGG + tig0020422:123174-123193 Msa1381140:CDS 45.0%
GTTTGTATGCCTCTGAGTTC+GGG - tig0020422:123334-123353 None:intergenic 45.0%
CCAGAAGTAATCAGGGATTC+GGG - tig0020422:123366-123385 None:intergenic 45.0%
GCCAGAAGTAATCAGGGATT+CGG - tig0020422:123367-123386 None:intergenic 45.0%
CTGCAAGCCAGAAGTAATCA+GGG - tig0020422:123373-123392 None:intergenic 45.0%
TCTGCAAGCCAGAAGTAATC+AGG - tig0020422:123374-123393 None:intergenic 45.0%
!! TACTTCTGGCTTGCAGAAGA+TGG + tig0020422:123377-123396 Msa1381140:CDS 45.0%
GAAATGTTGCAGGCCTTAGT+TGG - tig0020422:123443-123462 None:intergenic 45.0%
!! AGAGCTTTGGGTGTCAAATG+TGG + tig0020422:123761-123780 Msa1381140:intron 45.0%
!! GAGCTTTGGGTGTCAAATGT+GGG + tig0020422:123762-123781 Msa1381140:intron 45.0%
TCATGTGCTTTCCGAAGTGT+AGG - tig0020422:123844-123863 None:intergenic 45.0%
! GAAAGCACATGACTTCCTGA+AGG + tig0020422:123852-123871 Msa1381140:CDS 45.0%
! ATTGCTTTGAACTCACCGGA+TGG - tig0020422:123898-123917 None:intergenic 45.0%
GACACATATGCAAAGGATCG+TGG + tig0020422:123923-123942 Msa1381140:CDS 45.0%
TCTCAATGCATGACCAAGGT+TGG + tig0020422:123950-123969 Msa1381140:CDS 45.0%
!!! AATTTTGAGGCTCCCAAGCA+GGG - tig0020422:124227-124246 None:intergenic 45.0%
ACACCCAACTCATAGAGCTA+AGG + tig0020422:124581-124600 Msa1381140:CDS 45.0%
CATACACTACTCCACAGGTA+CGG + tig0020422:124792-124811 Msa1381140:intron 45.0%
GTAGAGGGACTAACAACTTG+TGG + tig0020422:124855-124874 Msa1381140:CDS 45.0%
GTCAAAGCAGCTTCCTAATG+GGG + tig0020422:124929-124948 Msa1381140:CDS 45.0%
TCAAAGCAGCTTCCTAATGG+GGG + tig0020422:124930-124949 Msa1381140:CDS 45.0%
!! TGGGCTTTGTTGTCCCTTAT+CGG + tig0020422:125107-125126 Msa1381140:CDS 45.0%
AGATGGAGATTTCCCACAAC+AGG + tig0020422:125308-125327 Msa1381140:CDS 45.0%
ATCTTTCCCATATGGGCTCT+GGG + tig0020422:125487-125506 Msa1381140:CDS 45.0%
GTGTACAACCAATTAGCACC+TGG - tig0020422:125583-125602 None:intergenic 45.0%
!!! TTAAAATTTGTAATTTTTTA+TGG - tig0020422:116928-116947 None:intergenic 5.0%
!!! TTAGAAAAAATTTATTTTAT+GGG - tig0020422:119397-119416 None:intergenic 5.0%
!!! TTTCAAATTTTTAAAAAATA+GGG - tig0020422:119716-119735 None:intergenic 5.0%
!!! ATTTCAAATTTTTAAAAAAT+AGG - tig0020422:119717-119736 None:intergenic 5.0%
!!! AAAATTTGAAATTTATTAAA+AGG + tig0020422:119725-119744 Msa1381140:intron 5.0%
!! AATTTAATATAAATTAATCA+TGG + tig0020422:123653-123672 Msa1381140:intron 5.0%
AAGGTACGAGGTTGAAACCC+CGG - tig0020422:116726-116745 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - tig0020422:116772-116791 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + tig0020422:116769-116788 Msa1381140:intron 50.0%
GTTAGTGTTCGTCTGAACGC+TGG + tig0020422:120169-120188 Msa1381140:intron 50.0%
TTCAAGCTCATGATGGCCAC+TGG + tig0020422:120608-120627 Msa1381140:CDS 50.0%
GAGGTCCTAGAACCTCATCA+AGG - tig0020422:120909-120928 None:intergenic 50.0%
GGGAAGGGATCCTCATCTAA+AGG - tig0020422:121341-121360 None:intergenic 50.0%
CTTTGATTCTGAGCAGGGGA+AGG - tig0020422:121357-121376 None:intergenic 50.0%
CTCCGTATCCTCCTTCACAT+CGG + tig0020422:121434-121453 Msa1381140:intron 50.0%
! TGAGCTGTGGGTTATTCCAG+AGG - tig0020422:121790-121809 None:intergenic 50.0%
TGCGGTCATCATTGTGCACA+AGG + tig0020422:122016-122035 Msa1381140:intron 50.0%
AGGTGACAGAACGAAGATGG+TGG + tig0020422:122336-122355 Msa1381140:intron 50.0%
!! GACAGAACGAAGATGGTGGA+TGG + tig0020422:122340-122359 Msa1381140:intron 50.0%
!! CAGAACGAAGATGGTGGATG+GGG + tig0020422:122342-122361 Msa1381140:intron 50.0%
CTTGGAGAAGGACCTGAAGA+TGG + tig0020422:122429-122448 Msa1381140:CDS 50.0%
GCCTTGTCTTCACCATCTTC+AGG - tig0020422:122444-122463 None:intergenic 50.0%
CCACTAAACCACCATGGTCA+AGG - tig0020422:122491-122510 None:intergenic 50.0%
CCTTGACCATGGTGGTTTAG+TGG + tig0020422:122488-122507 Msa1381140:CDS 50.0%
ACCCAGAACTTTCCCCATGA+TGG - tig0020422:122519-122538 None:intergenic 50.0%
!! ATGGGGAAAGTTCTGGGTCA+CGG + tig0020422:122521-122540 Msa1381140:CDS 50.0%
CTTGGAGTTTATGAGTGGCG+AGG + tig0020422:122639-122658 Msa1381140:CDS 50.0%
CCCGAATCCCTGATTACTTC+TGG + tig0020422:123363-123382 Msa1381140:CDS 50.0%
AGTCAGAGACTTGCCAACCT+TGG - tig0020422:123966-123985 None:intergenic 50.0%
CATTACTGCTCTGTAGCGAG+AGG - tig0020422:124197-124216 None:intergenic 50.0%
CTCTCGCTACAGAGCAGTAA+TGG + tig0020422:124195-124214 Msa1381140:CDS 50.0%
TCGCTACAGAGCAGTAATGG+CGG + tig0020422:124198-124217 Msa1381140:CDS 50.0%
!!! GAATTTTGAGGCTCCCAAGC+AGG - tig0020422:124228-124247 None:intergenic 50.0%
! CACAAAACCCTGATGGATCC+TGG + tig0020422:124649-124668 Msa1381140:CDS 50.0%
!! TGGCACTTGGTTTGCTGTAG+AGG + tig0020422:124839-124858 Msa1381140:CDS 50.0%
!! GGCACTTGGTTTGCTGTAGA+GGG + tig0020422:124840-124859 Msa1381140:CDS 50.0%
CAAAGCAGCTTCCTAATGGG+GGG + tig0020422:124931-124950 Msa1381140:CDS 50.0%
TTGTTGTCCCTTATCGGTGC+AGG + tig0020422:125113-125132 Msa1381140:CDS 50.0%
TGTTGTCCCTTATCGGTGCA+GGG + tig0020422:125114-125133 Msa1381140:CDS 50.0%
ATTCCACGGTGTATGGGTGT+AGG - tig0020422:125261-125280 None:intergenic 50.0%
CATCTTTCCCATATGGGCTC+TGG + tig0020422:125486-125505 Msa1381140:CDS 50.0%
TACTCTCCCAGAGCCCATAT+GGG - tig0020422:125496-125515 None:intergenic 50.0%
ATACTCTCCCAGAGCCCATA+TGG - tig0020422:125497-125516 None:intergenic 50.0%
CTCACTACCCAGGTGCTAAT+TGG + tig0020422:125572-125591 Msa1381140:three_prime_UTR 50.0%
CCAACTGAGTTAAGCTCGCG+AGG - tig0020422:116237-116256 None:intergenic 55.0%
CCTCGCGAGCTTAACTCAGT+TGG + tig0020422:116234-116253 Msa1381140:intron 55.0%
! CAGAGCAGTACGGAAGCGTA+GGG - tig0020422:118752-118771 None:intergenic 55.0%
! TCAGAGCAGTACGGAAGCGT+AGG - tig0020422:118753-118772 None:intergenic 55.0%
! TGACGCAGTACGGAAGCGTA+GGG + tig0020422:118780-118799 Msa1381140:intron 55.0%
AAACCCTCTTGCATCAGGGG+TGG + tig0020422:119105-119124 Msa1381140:intron 55.0%
AAAGGGCCAGCAGATTCTGC+AGG - tig0020422:120634-120653 None:intergenic 55.0%
TATGCGAATTGTGGTCGGCG+AGG + tig0020422:122086-122105 Msa1381140:intron 55.0%
GTAGGACCTAGGTATGCACC+TGG - tig0020422:122720-122739 None:intergenic 55.0%
GGTTGAAGACCCGAACTCAG+AGG + tig0020422:123322-123341 Msa1381140:CDS 55.0%
TGACTTCCTGAAGGCCTCAC+AGG + tig0020422:123861-123880 Msa1381140:CDS 55.0%
CAACTACCTGTGAGGCCTTC+AGG - tig0020422:123870-123889 None:intergenic 55.0%
CGCTACAGAGCAGTAATGGC+GGG + tig0020422:124199-124218 Msa1381140:CDS 55.0%
!! TAATGGCGGGTTCCCTGCTT+GGG + tig0020422:124212-124231 Msa1381140:CDS 55.0%
TACTCCACAGGTACGGCTGT+TGG + tig0020422:124799-124818 Msa1381140:intron 55.0%
ACTCCACAGGTACGGCTGTT+GGG + tig0020422:124800-124819 Msa1381140:intron 55.0%
! AACCTGCCCTGCACCGATAA+GGG - tig0020422:125123-125142 None:intergenic 55.0%
! TAACCTGCCCTGCACCGATA+AGG - tig0020422:125124-125143 None:intergenic 55.0%
CTAGCTTAGCTCCTGCCTCT+TGG + tig0020422:125162-125181 Msa1381140:intron 55.0%
GATCCTACACCCATACACCG+TGG + tig0020422:125255-125274 Msa1381140:CDS 55.0%
CGCTTCCGTACTGCGTCAGT+TGG - tig0020422:118778-118797 None:intergenic 60.0%
! CTGACGCAGTACGGAAGCGT+AGG + tig0020422:118779-118798 Msa1381140:intron 60.0%
GGTCCACCCCTGATGCAAGA+GGG - tig0020422:119111-119130 None:intergenic 60.0%
CAGCAGATTCTGCAGGCCAG+TGG - tig0020422:120627-120646 None:intergenic 60.0%
! CACTGGCCTGCAGAATCTGC+TGG + tig0020422:120625-120644 Msa1381140:CDS 60.0%
GCACTGAGGCTGCTTGGAGA+AGG + tig0020422:122417-122436 Msa1381140:CDS 60.0%
GTCTCTGACTGCACCGCAGA+AGG + tig0020422:123976-123995 Msa1381140:CDS 60.0%
CTGCACCGCAGAAGGACTCA+AGG + tig0020422:123984-124003 Msa1381140:CDS 60.0%
!! GTAATGGCGGGTTCCCTGCT+TGG + tig0020422:124211-124230 Msa1381140:CDS 60.0%
CTCCACAGGTACGGCTGTTG+GGG + tig0020422:124801-124820 Msa1381140:intron 60.0%
TTCCCCAACAGCCGTACCTG+TGG - tig0020422:124806-124825 None:intergenic 60.0%
AGCAGCTTCCTAATGGGGGG+TGG + tig0020422:124934-124953 Msa1381140:CDS 60.0%
GCAGCTTCCTAATGGGGGGT+GGG + tig0020422:124935-124954 Msa1381140:CDS 60.0%
CAGCTTCCTAATGGGGGGTG+GGG + tig0020422:124936-124955 Msa1381140:CDS 60.0%
CTTTCTCCCCACCCCCCATT+AGG - tig0020422:124945-124964 None:intergenic 60.0%
GGGTCCACCCCTGATGCAAG+AGG - tig0020422:119112-119131 None:intergenic 65.0%
GTCCCTTATCGGTGCAGGGC+AGG + tig0020422:125118-125137 Msa1381140:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0020422 gene 115604 125804 115604 ID=Msa1381140;Name=Msa1381140
tig0020422 mRNA 115604 125804 115604 ID=Msa1381140-mRNA-1;Parent=Msa1381140;Name=Msa1381140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=93|1|1|1|1|1|15|243|762
tig0020422 exon 115604 115891 115604 ID=Msa1381140-mRNA-1:exon:7380;Parent=Msa1381140-mRNA-1
tig0020422 exon 120487 120672 120487 ID=Msa1381140-mRNA-1:exon:7381;Parent=Msa1381140-mRNA-1
tig0020422 exon 120880 120969 120880 ID=Msa1381140-mRNA-1:exon:7382;Parent=Msa1381140-mRNA-1
tig0020422 exon 122345 122542 122345 ID=Msa1381140-mRNA-1:exon:7383;Parent=Msa1381140-mRNA-1
tig0020422 exon 122636 122720 122636 ID=Msa1381140-mRNA-1:exon:7384;Parent=Msa1381140-mRNA-1
tig0020422 exon 122818 122984 122818 ID=Msa1381140-mRNA-1:exon:7385;Parent=Msa1381140-mRNA-1
tig0020422 exon 123110 123412 123110 ID=Msa1381140-mRNA-1:exon:7386;Parent=Msa1381140-mRNA-1
tig0020422 exon 123763 124005 123763 ID=Msa1381140-mRNA-1:exon:7387;Parent=Msa1381140-mRNA-1
tig0020422 exon 124108 124263 124108 ID=Msa1381140-mRNA-1:exon:7388;Parent=Msa1381140-mRNA-1
tig0020422 exon 124367 124413 124367 ID=Msa1381140-mRNA-1:exon:7389;Parent=Msa1381140-mRNA-1
tig0020422 exon 124527 124670 124527 ID=Msa1381140-mRNA-1:exon:7390;Parent=Msa1381140-mRNA-1
tig0020422 exon 124809 124986 124809 ID=Msa1381140-mRNA-1:exon:7391;Parent=Msa1381140-mRNA-1
tig0020422 exon 125059 125139 125059 ID=Msa1381140-mRNA-1:exon:7392;Parent=Msa1381140-mRNA-1
tig0020422 exon 125246 125329 125246 ID=Msa1381140-mRNA-1:exon:7393;Parent=Msa1381140-mRNA-1
tig0020422 exon 125430 125804 125430 ID=Msa1381140-mRNA-1:exon:7394;Parent=Msa1381140-mRNA-1
tig0020422 five_prime_UTR 115604 115696 115604 ID=Msa1381140-mRNA-1:five_prime_utr;Parent=Msa1381140-mRNA-1
tig0020422 CDS 115697 115891 115697 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 120487 120672 120487 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 120880 120969 120880 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 122345 122542 122345 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 122636 122720 122636 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 122818 122984 122818 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 123110 123412 123110 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 123763 124005 123763 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 124108 124263 124108 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 124367 124413 124367 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 124527 124670 124527 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 124809 124986 124809 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 125059 125139 125059 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 125246 125329 125246 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 CDS 125430 125561 125430 ID=Msa1381140-mRNA-1:cds;Parent=Msa1381140-mRNA-1
tig0020422 three_prime_UTR 125562 125804 125562 ID=Msa1381140-mRNA-1:three_prime_utr;Parent=Msa1381140-mRNA-1
Gene Sequence

>Msa1381140

ATGTGGAAGTTGAAGATAGCAGAAGGAGGAGAAGGGTTGATTTCTGTGAATAACTTCATAGGACGTCAACACTGGGAATTTGATCCAAATGCAGGAACACCACAAGAACATGCTGAGATTGAAAGGCTACGCATTCAATTCACCAAAAATAGATTCTCCATCAAACAAAGTTCTGACCTCTTGATGAGAATGCAGCTAAAAAAAGAGAATCAATGTAGCCCCATTCCACCAGCAGTTAAACTGAGAGAAGAAGATATCATAACAGGGGAAGCATTGATTACAACAATAAGAAGGGCTACAAGTTTCTATTCCTCAATTCAAGCTCATGATGGCCACTGGCCTGCAGAATCTGCTGGCCCTTTGTTTTTTGTTCAACCATTGGTAATGGCCCTCTATGTTACAGGATCCCTTGATGAGGTTCTAGGACCTCAACATAAGAAGGAAATTGTTCGGTATTTATATAATCACCAGAACGAAGATGGTGGATGGGGATTCCATATAGAGGGTCATAGCACAATGTTTGGATCAGCATTGAGCTATATTGCACTGAGGCTGCTTGGAGAAGGACCTGAAGATGGTGAAGACAAGGCAATGGAGAGATGCAGAAATTGGATCCTTGACCATGGTGGTTTAGTGGCTATTCCATCATGGGGAAAGTTCTGGGTCACGGTACTTGGAGTTTATGAGTGGCGAGGCTGCAATCCACTTCCACCAGAATTCTGGTTTCTACCAAAATTCACCCCTATTCATCCAGGGAAAATGTTGTGCTACTGTCGGTTAGTTTACATGCCCATGTCATATCTATATGGGAAGAAGTTTGTGGGCCCTATCACTGACCTAATCAAATCACTGAGAGAAGAACTGTACAATCAACCTTATGATCAAATCAACTGGAACAAAGCCCGGAATACTATTGCTAAGGAGGATCTGTACTACCCACATCCTATGATTCAAGATATGTTATGGGGATTTCTTTATCATGTGGGAGAGCCTTTTCTGAATTGCTGGCCTTTCACCAAGCTTAGACAGAAGGCATTAGAAATTGCAATTAATCATGTGCGTTACGAGGATGAGAACAGTAGATACCTTTGCATTGGAAGTGTAGAGAAGGTATTATGTTTGATAGCGCGTTGGGTTGAAGACCCGAACTCAGAGGCATACAAACTTCATTTAGCCCGAATCCCTGATTACTTCTGGCTTGCAGAAGATGGCTTGAAAATCCAGAGCTTTGGGTGTCAAATGTGGGATGCAGCATTTGCTATACAAGCAATACTTGCTTGTAACGTGAGTGAAGAGTATGGTCCTACACTTCGGAAAGCACATGACTTCCTGAAGGCCTCACAGGTAGTTGAAAATCCATCCGGTGAGTTCAAAGCAATGTACAGACACATATGCAAAGGATCGTGGACATTCTCAATGCATGACCAAGGTTGGCAAGTCTCTGACTGCACCGCAGAAGGACTCAAGGCCGCACTCCTGTTGTCAAAAATGCCAACTGATCTTGTTGGAGAAAAATTGGAAACAGAGCGACTCTACGATGCTGTTAATGTCATCCTCTCGCTACAGAGCAGTAATGGCGGGTTCCCTGCTTGGGAGCCTCAAAATTCTTACAGTTGGTTAGAGAAATTCAATCCAACTGAATTCTTTGAAGACACACTGATTGAGAGGGAGTATGTTGAGTGCACTGGTTCTGCAATGCAAGCCCTGTATCTCTTCACAAAGCTACACCCAACTCATAGAGCTAAGGAAATACATCACTGCCTTTCCAAAGCAATTCATTTCATTGAAAACACACAAAACCCTGATGGATCCTGGTACGGCTGTTGGGGAATTTGCTATACGTATGGCACTTGGTTTGCTGTAGAGGGACTAACAACTTGTGGAAAGAATTACCGTAACAGTCCTTCCTTGCAAAAAGCTTGTCAATTTTTATTGTCAAAGCAGCTTCCTAATGGGGGGTGGGGAGAAAGTTATTTGTCAAGCCAAAACAAGGTATATACAAACCTAGAAGACAACCGTGCAAATTTAGTTCAAACTTCGTGGGCTTTGTTGTCCCTTATCGGTGCAGGGCAGGCTGATATAGATCCTACACCCATACACCGTGGAATGAAGTTAATAATCAATTCACAGATGGAAGATGGAGATTTCCCACAACAGGAGATAACAGGAGTATTTATGAGGAATTGTACCCTGAACTACTCATCATATCGAAACATCTTTCCCATATGGGCTCTGGGAGAGTATCGTCACCGAGTCTTGTCTGCACAAATTCCAAATGCTGCACCTTGA
Protein sequence

>Msa1381140

MWKLKIAEGGEGLISVNNFIGRQHWEFDPNAGTPQEHAEIERLRIQFTKNRFSIKQSSDLLMRMQLKKENQCSPIPPAVKLREEDIITGEALITTIRRATSFYSSIQAHDGHWPAESAGPLFFVQPLVMALYVTGSLDEVLGPQHKKEIVRYLYNHQNEDGGWGFHIEGHSTMFGSALSYIALRLLGEGPEDGEDKAMERCRNWILDHGGLVAIPSWGKFWVTVLGVYEWRGCNPLPPEFWFLPKFTPIHPGKMLCYCRLVYMPMSYLYGKKFVGPITDLIKSLREELYNQPYDQINWNKARNTIAKEDLYYPHPMIQDMLWGFLYHVGEPFLNCWPFTKLRQKALEIAINHVRYEDENSRYLCIGSVEKVLCLIARWVEDPNSEAYKLHLARIPDYFWLAEDGLKIQSFGCQMWDAAFAIQAILACNVSEEYGPTLRKAHDFLKASQVVENPSGEFKAMYRHICKGSWTFSMHDQGWQVSDCTAEGLKAALLLSKMPTDLVGEKLETERLYDAVNVILSLQSSNGGFPAWEPQNSYSWLEKFNPTEFFEDTLIEREYVECTGSAMQALYLFTKLHPTHRAKEIHHCLSKAIHFIENTQNPDGSWYGCWGICYTYGTWFAVEGLTTCGKNYRNSPSLQKACQFLLSKQLPNGGWGESYLSSQNKVYTNLEDNRANLVQTSWALLSLIGAGQADIDPTPIHRGMKLIINSQMEDGDFPQQEITGVFMRNCTLNYSSYRNIFPIWALGEYRHRVLSAQIPNAAP*