Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385670 | XP_003603840.3 | 99.544 | 439 | 2 | 0 | 1 | 439 | 12 | 450 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385670 | sp|Q8CIA9|MF14B_MOUSE | 25.205 | 365 | 227 | 10 | 56 | 406 | 83 | 415 | 3.17e-17 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385670 | G7J5X3 | 99.539 | 434 | 2 | 0 | 6 | 439 | 1 | 434 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044100 | Msa0385670 | 0.811763 | 5.949256e-51 | -8.615850e-47 |
| Msa0095540 | Msa0385670 | 0.801749 | 7.772781e-49 | -8.615850e-47 |
| Msa0141100 | Msa0385670 | 0.827465 | 1.541468e-54 | -8.615850e-47 |
| Msa0183750 | Msa0385670 | 0.835289 | 1.830295e-56 | -8.615850e-47 |
| Msa0185380 | Msa0385670 | 0.806316 | 8.729675e-50 | -8.615850e-47 |
| Msa0374850 | Msa0385670 | 0.829517 | 4.925887e-55 | -8.615850e-47 |
| Msa0375090 | Msa0385670 | 0.816635 | 4.996614e-52 | -8.615850e-47 |
| Msa0385670 | Msa0435670 | 0.938523 | 5.846084e-99 | -8.615850e-47 |
| Msa0385670 | Msa0470340 | 0.809852 | 1.541367e-50 | -8.615850e-47 |
| Msa0385670 | Msa0470860 | 0.883035 | 6.306999e-71 | -8.615850e-47 |
| Msa0385670 | Msa0479680 | 0.958286 | 3.432182e-116 | -8.615850e-47 |
| Msa0385670 | Msa0479700 | 0.963090 | 1.163110e-121 | -8.615850e-47 |
| Msa0385670 | Msa0480950 | 0.842362 | 2.707827e-58 | -8.615850e-47 |
| Msa0385670 | Msa0531430 | 0.829422 | 5.193588e-55 | -8.615850e-47 |
| Msa0385670 | Msa0534590 | 0.812524 | 4.059634e-51 | -8.615850e-47 |
| Msa0385670 | Msa0565600 | 0.854331 | 1.322080e-61 | -8.615850e-47 |
| Msa0385670 | Msa0590800 | 0.812188 | 4.806326e-51 | -8.615850e-47 |
| Msa0385670 | Msa0611380 | 0.818060 | 2.386779e-52 | -8.615850e-47 |
| Msa0385670 | Msa0618180 | 0.850052 | 2.178579e-60 | -8.615850e-47 |
| Msa0385670 | Msa0618220 | 0.845352 | 4.285407e-59 | -8.615850e-47 |
| Msa0385670 | Msa0628640 | 0.825505 | 4.519216e-54 | -8.615850e-47 |
| Msa0385670 | Msa0631120 | 0.821500 | 3.905604e-53 | -8.615850e-47 |
| Msa0385670 | Msa0666030 | 0.817286 | 3.568736e-52 | -8.615850e-47 |
| Msa0385670 | Msa0669340 | 0.824047 | 9.974560e-54 | -8.615850e-47 |
| Msa0385670 | Msa0701970 | 0.840999 | 6.198650e-58 | -8.615850e-47 |
| Msa0385670 | Msa0716450 | 0.827917 | 1.200531e-54 | -8.615850e-47 |
| Msa0385670 | Msa0717260 | 0.844121 | 9.194958e-59 | -8.615850e-47 |
| Msa0385670 | Msa0734230 | 0.805990 | 1.021980e-49 | -8.615850e-47 |
| Msa0385670 | Msa0758320 | 0.834448 | 2.980468e-56 | -8.615850e-47 |
| Msa0385670 | Msa0775440 | 0.832533 | 8.953031e-56 | -8.615850e-47 |
| Msa0385670 | Msa0799030 | 0.808922 | 2.440639e-50 | -8.615850e-47 |
| Msa0385670 | Msa0799700 | 0.804679 | 1.924359e-49 | -8.615850e-47 |
| Msa0385670 | Msa0812820 | 0.809557 | 1.783651e-50 | -8.615850e-47 |
| Msa0385670 | Msa0837980 | 0.844890 | 5.711980e-59 | -8.615850e-47 |
| Msa0385670 | Msa0853320 | 0.830418 | 2.969420e-55 | -8.615850e-47 |
| Msa0385670 | Msa0981010 | 0.807690 | 4.468759e-50 | -8.615850e-47 |
| Msa0385670 | Msa1001770 | 0.801337 | 9.444835e-49 | -8.615850e-47 |
| Msa0385670 | Msa1002620 | 0.800658 | 1.299623e-48 | -8.615850e-47 |
| Msa0385670 | Msa1190120 | 0.873925 | 1.007580e-67 | -8.615850e-47 |
| Msa0385670 | Msa1203000 | 0.834729 | 2.532942e-56 | -8.615850e-47 |
| Msa0385670 | Msa1211550 | 0.838168 | 3.374889e-57 | -8.615850e-47 |
| Msa0385670 | Msa1219260 | 0.864942 | 8.454728e-65 | -8.615850e-47 |
| Msa0385670 | Msa1227950 | 0.864050 | 1.607197e-64 | -8.615850e-47 |
| Msa0385670 | Msa1227970 | 0.853037 | 3.113456e-61 | -8.615850e-47 |
| Msa0385670 | Msa1255280 | 0.837458 | 5.136838e-57 | -8.615850e-47 |
| Msa0385670 | Msa1266960 | 0.869358 | 3.286893e-66 | -8.615850e-47 |
| Msa0385670 | Msa1308130 | 0.877545 | 5.769328e-69 | -8.615850e-47 |
| Msa0385670 | Msa1339940 | 0.844183 | 8.849660e-59 | -8.615850e-47 |
| Msa0385670 | Msa1369700 | 0.818888 | 1.549334e-52 | -8.615850e-47 |
| Msa0385670 | Msa1381140 | 0.808700 | 2.722081e-50 | -8.615850e-47 |
| Msa0385670 | Msa1395870 | 0.832181 | 1.094584e-55 | -8.615850e-47 |
| Msa0385670 | Msa1399560 | 0.863552 | 2.294689e-64 | -8.615850e-47 |
| Msa0385670 | Msa1437190 | 0.828173 | 1.041461e-54 | -8.615850e-47 |
| Msa0385670 | Msa1443840 | 0.840612 | 7.830540e-58 | -8.615850e-47 |
| Msa0385670 | Msa1452060 | 0.840355 | 9.138848e-58 | -8.615850e-47 |
| Msa0385670 | Msa1460380 | 0.824776 | 6.721234e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385670 | MtrunA17_Chr3g0143461 | 99.735 | 377 | 1 | 0 | 63 | 439 | 1 | 377 | 0.0 | 762 |
| Msa0385670 | MtrunA17_Chr1g0211401 | 55.402 | 435 | 183 | 4 | 6 | 438 | 1 | 426 | 4.13e-171 | 487 |
| Msa0385670 | MtrunA17_Chr1g0198451 | 36.019 | 422 | 253 | 2 | 14 | 432 | 13 | 420 | 1.54e-90 | 281 |
| Msa0385670 | MtrunA17_Chr1g0198441 | 35.800 | 419 | 258 | 2 | 14 | 432 | 13 | 420 | 4.37e-90 | 280 |
| Msa0385670 | MtrunA17_Chr3g0143451 | 80.000 | 80 | 16 | 0 | 1 | 80 | 1 | 80 | 9.61e-38 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0385670 | AT5G42210.1 | 57.309 | 431 | 183 | 1 | 7 | 437 | 3 | 432 | 0.0 | 517 |
| Msa0385670 | AT5G42210.2 | 56.888 | 392 | 168 | 1 | 7 | 398 | 3 | 393 | 1.01e-163 | 467 |
| Msa0385670 | AT2G16980.3 | 44.662 | 459 | 220 | 3 | 3 | 437 | 13 | 461 | 1.73e-138 | 405 |
| Msa0385670 | AT2G16980.2 | 44.518 | 456 | 219 | 3 | 6 | 437 | 1 | 446 | 2.99e-137 | 402 |
| Msa0385670 | AT2G16990.7 | 48.936 | 423 | 201 | 4 | 13 | 422 | 7 | 427 | 8.74e-137 | 400 |
| Msa0385670 | AT2G16990.1 | 48.513 | 437 | 210 | 4 | 13 | 436 | 7 | 441 | 6.48e-136 | 398 |
| Msa0385670 | AT2G16990.2 | 48.513 | 437 | 210 | 4 | 13 | 436 | 7 | 441 | 6.48e-136 | 398 |
| Msa0385670 | AT2G16970.2 | 45.067 | 446 | 229 | 3 | 6 | 436 | 1 | 445 | 2.24e-135 | 397 |
| Msa0385670 | AT2G16980.4 | 44.444 | 459 | 220 | 4 | 3 | 437 | 13 | 460 | 1.11e-133 | 393 |
| Msa0385670 | AT2G16990.4 | 48.000 | 400 | 193 | 4 | 13 | 399 | 7 | 404 | 1.28e-124 | 367 |
| Msa0385670 | AT2G16990.6 | 48.000 | 400 | 193 | 4 | 13 | 399 | 7 | 404 | 1.28e-124 | 367 |
| Msa0385670 | AT2G16980.1 | 43.095 | 420 | 205 | 3 | 3 | 398 | 13 | 422 | 8.75e-120 | 356 |
| Msa0385670 | AT2G16990.8 | 45.538 | 437 | 196 | 5 | 13 | 436 | 7 | 414 | 2.82e-119 | 355 |
| Msa0385670 | AT2G16970.4 | 43.627 | 408 | 214 | 3 | 6 | 398 | 1 | 407 | 1.83e-117 | 349 |
| Msa0385670 | AT2G16970.7 | 43.627 | 408 | 214 | 3 | 6 | 398 | 1 | 407 | 1.83e-117 | 349 |
| Msa0385670 | AT2G16970.3 | 42.453 | 424 | 228 | 3 | 6 | 414 | 1 | 423 | 5.19e-117 | 350 |
| Msa0385670 | AT2G16980.5 | 41.071 | 448 | 202 | 5 | 3 | 398 | 13 | 450 | 1.99e-115 | 346 |
| Msa0385670 | AT2G16970.6 | 43.081 | 383 | 202 | 3 | 6 | 373 | 1 | 382 | 8.27e-106 | 319 |
| Msa0385670 | AT2G16990.3 | 46.556 | 363 | 171 | 5 | 13 | 354 | 7 | 367 | 1.68e-103 | 313 |
| Msa0385670 | AT2G16990.5 | 46.556 | 363 | 171 | 5 | 13 | 354 | 7 | 367 | 1.68e-103 | 313 |
| Msa0385670 | AT2G16970.1 | 41.282 | 390 | 208 | 4 | 6 | 380 | 1 | 384 | 2.30e-101 | 307 |
| Msa0385670 | AT2G16970.8 | 43.417 | 357 | 186 | 3 | 6 | 347 | 1 | 356 | 8.14e-100 | 303 |
| Msa0385670 | AT2G16980.6 | 41.124 | 338 | 165 | 3 | 123 | 437 | 1 | 327 | 1.45e-81 | 255 |
| Msa0385670 | AT2G16970.5 | 54.598 | 174 | 78 | 1 | 6 | 178 | 1 | 174 | 1.61e-57 | 193 |
| Msa0385670 | AT2G16970.5 | 49.390 | 164 | 83 | 0 | 273 | 436 | 175 | 338 | 4.18e-51 | 176 |
Find 108 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGACTTAATGATCATTTC+TGG | 0.173185 | 3_1:+89301556 | Msa0385670:CDS |
| TTGTGTGCAGTATTACTTAA+AGG | 0.198024 | 3_1:+89301504 | Msa0385670:intron |
| CTTGCAGATGTTGGCCTTCA+TGG | 0.200217 | 3_1:+89301384 | Msa0385670:CDS |
| ACTTTCCACTCACCCGTTAA+TGG | 0.208512 | 3_1:-89302649 | None:intergenic |
| GCTTGTGATGATGCCCATTT+TGG | 0.228414 | 3_1:+89298952 | Msa0385670:CDS |
| ATCAGAGAGATCACCCAAAA+TGG | 0.242550 | 3_1:-89298966 | None:intergenic |
| GCACTGCTTCTTCGACCTTC+TGG | 0.250970 | 3_1:-89300446 | None:intergenic |
| GGTGATCTCTCTGATAAGTA+TGG | 0.311306 | 3_1:+89298974 | Msa0385670:CDS |
| GGCTTTCCTTGTGAAATGAT+TGG | 0.315353 | 3_1:-89300733 | None:intergenic |
| CTGAAGCCAGGAAAATTAAA+AGG | 0.317779 | 3_1:-89302766 | None:intergenic |
| ATGATCATTTCTGGTATTGC+AGG | 0.320953 | 3_1:+89301565 | Msa0385670:CDS |
| GCTTTCCTTGTGAAATGATT+GGG | 0.321252 | 3_1:-89300732 | None:intergenic |
| GGGATAATCATGAGGGTCAT+AGG | 0.323838 | 3_1:-89299019 | None:intergenic |
| ATGGAGAAATTGAATATGTA+TGG | 0.326739 | 3_1:+89292523 | Msa0385670:CDS |
| AATCATGAGTGGGAGAATTA+TGG | 0.327479 | 3_1:+89292504 | Msa0385670:exon |
| CTTGGCTTTCTCTCCATTAA+CGG | 0.331892 | 3_1:+89302636 | Msa0385670:CDS |
| TCATAATTTATCGACATTCA+TGG | 0.337515 | 3_1:+89292576 | Msa0385670:CDS |
| AGTGCATTTGGAGTTCTTTC+AGG | 0.349547 | 3_1:+89300464 | Msa0385670:CDS |
| GGTCGAAGAAGCAGTGCATT+TGG | 0.349597 | 3_1:+89300452 | Msa0385670:CDS |
| TATGTCCATCTAACTCAAAA+TGG | 0.361400 | 3_1:-89302944 | None:intergenic |
| TGATAAGCCATGTACAAAAC+TGG | 0.382050 | 3_1:-89292424 | None:intergenic |
| AGGGCTCAAGGTTGCATCTC+AGG | 0.406266 | 3_1:+89302583 | Msa0385670:CDS |
| TTGGCTTTCTCTCCATTAAC+GGG | 0.411542 | 3_1:+89302637 | Msa0385670:CDS |
| AAGTGAGCATTCATCTTGTC+CGG | 0.414098 | 3_1:-89292641 | None:intergenic |
| ACAGCATAGCATGGTCCTCT+TGG | 0.414980 | 3_1:+89301915 | Msa0385670:CDS |
| AAAGGAGGTTATATCTCTTA+AGG | 0.419562 | 3_1:-89300818 | None:intergenic |
| TTCAGCAACCTTGCAGATGT+TGG | 0.424383 | 3_1:+89301375 | Msa0385670:CDS |
| GACCCTCATGATTATCCCCT+TGG | 0.424391 | 3_1:+89299024 | Msa0385670:CDS |
| GGCTTCAGTATAATGTGTAT+TGG | 0.431166 | 3_1:+89302781 | Msa0385670:CDS |
| TTATAAGTTATAGTACATAT+TGG | 0.434440 | 3_1:+89292364 | Msa0385670:five_prime_UTR |
| TGCACATATTGTATCTCCCT+TGG | 0.435532 | 3_1:+89302618 | Msa0385670:CDS |
| AGCTCTATTTCTATCTGAAA+AGG | 0.445760 | 3_1:+89302741 | Msa0385670:intron |
| GAGAACATTGCAGCAGCATA+AGG | 0.448056 | 3_1:-89302116 | None:intergenic |
| CAGCATAGCATGGTCCTCTT+GGG | 0.448466 | 3_1:+89301916 | Msa0385670:CDS |
| TGGATGATTCGCAGGCATAT+TGG | 0.454868 | 3_1:+89300160 | Msa0385670:intron |
| TTTGGAGTTCTTTCAGGGAT+AGG | 0.457164 | 3_1:+89300470 | Msa0385670:CDS |
| AAATGATTGGGGTATAAAGT+TGG | 0.469648 | 3_1:-89300720 | None:intergenic |
| CTCCTACTTTGGGCGAGGCA+AGG | 0.477680 | 3_1:+89301757 | Msa0385670:CDS |
| TTCTTTCAGGGAAGGGCTCA+AGG | 0.479698 | 3_1:+89302571 | Msa0385670:intron |
| TTGAAAACCAGTGAGATAGA+TGG | 0.487866 | 3_1:-89292665 | None:intergenic |
| TGCAGTATTACTTAAAGGCT+CGG | 0.491711 | 3_1:+89301509 | Msa0385670:intron |
| ATTGTTACATCGGTGATTGC+TGG | 0.492648 | 3_1:-89292604 | None:intergenic |
| GTGCATTTGGAGTTCTTTCA+GGG | 0.492657 | 3_1:+89300465 | Msa0385670:CDS |
| TCGTCAATATTTACTCATAG+TGG | 0.496771 | 3_1:+89302993 | Msa0385670:three_prime_UTR |
| ACAGTTTCTATAGATAAAGA+AGG | 0.497344 | 3_1:-89303019 | None:intergenic |
| ATCATTAACATGATTTGCGA+TGG | 0.498843 | 3_1:+89300233 | Msa0385670:CDS |
| GAGGCAAGGCTTCTTTCGAT+TGG | 0.501981 | 3_1:+89301771 | Msa0385670:CDS |
| TCACTTGCCATCTATCTCAC+TGG | 0.503898 | 3_1:+89292658 | Msa0385670:CDS |
| TGCTCTTGTGATTAACTCGA+AGG | 0.507438 | 3_1:+89292312 | Msa0385670:five_prime_UTR |
| TATTGCAGGGACTGTGTCAC+AGG | 0.508069 | 3_1:+89301579 | Msa0385670:CDS |
| ACTAAAATTAAGACAAAGAC+GGG | 0.508180 | 3_1:-89303171 | None:intergenic |
| TAACCTCCTTTCTCAATAGT+AGG | 0.508494 | 3_1:+89300830 | Msa0385670:CDS |
| AATGTGTATTGGAATTGCTT+CGG | 0.510199 | 3_1:+89302792 | Msa0385670:CDS |
| GAGCTCAATGCTTTCAAAAG+TGG | 0.510207 | 3_1:-89300796 | None:intergenic |
| ACCCTCATGATTATCCCCTT+GGG | 0.512456 | 3_1:+89299025 | Msa0385670:CDS |
| GGATAATCATGAGGGTCATA+GGG | 0.513412 | 3_1:-89299018 | None:intergenic |
| TCAGAGAGATCACCCAAAAT+GGG | 0.513615 | 3_1:-89298965 | None:intergenic |
| GGTCATAGGGAGCGTAAGAA+TGG | 0.513622 | 3_1:-89299005 | None:intergenic |
| CTTTCCTTGTGAAATGATTG+GGG | 0.515488 | 3_1:-89300731 | None:intergenic |
| TAAACAAACAAAATGTCTAC+TGG | 0.523583 | 3_1:-89303138 | None:intergenic |
| ACAAGTTGATCCCCGTGAGC+AGG | 0.529631 | 3_1:+89302296 | Msa0385670:CDS |
| CTCTGATAAGTATGGGAGGA+AGG | 0.534368 | 3_1:+89298982 | Msa0385670:CDS |
| TTAACATGATACCTGCTCAC+GGG | 0.541820 | 3_1:-89302307 | None:intergenic |
| GTCACACCTACTATTGAGAA+AGG | 0.547596 | 3_1:-89300836 | None:intergenic |
| TGATCATTTCTGGTATTGCA+GGG | 0.548846 | 3_1:+89301566 | Msa0385670:CDS |
| ACAATGGCTGCTCTTTGTCC+CGG | 0.553213 | 3_1:+89292622 | Msa0385670:CDS |
| ACCAGAAATGATCATTAAGT+CGG | 0.565383 | 3_1:-89301557 | None:intergenic |
| GAAAGACGGTCATGAAGAGA+TGG | 0.572645 | 3_1:-89292552 | None:intergenic |
| AACTAAAATTAAGACAAAGA+CGG | 0.573749 | 3_1:-89303172 | None:intergenic |
| TCCATCTAACTCAAAATGGA+AGG | 0.576928 | 3_1:-89302940 | None:intergenic |
| TGGCCTTCATGGTTCAATGA+TGG | 0.579807 | 3_1:+89301395 | Msa0385670:CDS |
| AGTGAGCATTCATCTTGTCC+GGG | 0.580465 | 3_1:-89292640 | None:intergenic |
| GCTTATCATGTTATATAGAG+AGG | 0.581974 | 3_1:+89292439 | Msa0385670:five_prime_UTR |
| GTGATCTCTCTGATAAGTAT+GGG | 0.589147 | 3_1:+89298975 | Msa0385670:CDS |
| ATACCATCATTGAACCATGA+AGG | 0.590082 | 3_1:-89301398 | None:intergenic |
| CGATACCCTATGTGTGTGTG+TGG | 0.591869 | 3_1:-89292337 | None:intergenic |
| AGCCTTGCCTCGCCCAAAGT+AGG | 0.594097 | 3_1:-89301759 | None:intergenic |
| TCAGAGTATGATGCTTAGAG+TGG | 0.595054 | 3_1:+89302915 | Msa0385670:CDS |
| CTTATCATGTTATATAGAGA+GGG | 0.601967 | 3_1:+89292440 | Msa0385670:five_prime_UTR |
| ATACACATTATACTGAAGCC+AGG | 0.605025 | 3_1:-89302778 | None:intergenic |
| ATCTCTCTGATAAGTATGGG+AGG | 0.608663 | 3_1:+89298978 | Msa0385670:CDS |
| ATTAACATGATACCTGCTCA+CGG | 0.609111 | 3_1:-89302308 | None:intergenic |
| TGTTCATTTACAGCATAGCA+TGG | 0.610699 | 3_1:+89301906 | Msa0385670:CDS |
| TACCCAAGGGGATAATCATG+AGG | 0.613909 | 3_1:-89299027 | None:intergenic |
| CGATAAATTATGAAGAAAGA+CGG | 0.614156 | 3_1:-89292566 | None:intergenic |
| ATTAACTTATAATCATGAGT+GGG | 0.615387 | 3_1:+89292494 | Msa0385670:exon |
| TGGAGAAATTGAATATGTAT+GGG | 0.616448 | 3_1:+89292524 | Msa0385670:CDS |
| AATTAACTTATAATCATGAG+TGG | 0.618145 | 3_1:+89292493 | Msa0385670:exon |
| TATACCCCAATCATTTCACA+AGG | 0.622314 | 3_1:+89300727 | Msa0385670:CDS |
| AGCAATCACCGATGTAACAA+TGG | 0.634236 | 3_1:+89292606 | Msa0385670:CDS |
| AAGAGCAGCCATTGTTACAT+CGG | 0.640036 | 3_1:-89292614 | None:intergenic |
| CATCGGCGACTGAATCCCGA+AGG | 0.645898 | 3_1:-89300693 | None:intergenic |
| ATCATGTTATATAGAGAGGG+TGG | 0.646317 | 3_1:+89292443 | Msa0385670:five_prime_UTR |
| TAACATGATACCTGCTCACG+GGG | 0.648157 | 3_1:-89302306 | None:intergenic |
| CGTTAATGGAGAGAAAGCCA+AGG | 0.651353 | 3_1:-89302635 | None:intergenic |
| ACCCAAGGGGATAATCATGA+GGG | 0.653332 | 3_1:-89299026 | None:intergenic |
| TAGGCAGATAACGTTCCAGA+AGG | 0.656602 | 3_1:+89300431 | Msa0385670:intron |
| CATGAAGGCCAACATCTGCA+AGG | 0.659193 | 3_1:-89301383 | None:intergenic |
| ACGTAAGCTAGAGCGAGGCA+AGG | 0.659385 | 3_1:-89300263 | None:intergenic |
| AGATGTGTAGTACATGTATG+TGG | 0.668672 | 3_1:+89303305 | Msa0385670:three_prime_UTR |
| CACCTGAAAAGTTTGAGCAG+CGG | 0.670212 | 3_1:-89300537 | None:intergenic |
| GTTAATGGAGAGAAAGCCAA+GGG | 0.684337 | 3_1:-89302634 | None:intergenic |
| ACACCTACTATTGAGAAAGG+AGG | 0.685291 | 3_1:-89300833 | None:intergenic |
| CAGCAAAAGACATACCCAAG+AGG | 0.697205 | 3_1:-89301930 | None:intergenic |
| TAACAACGTAAGCTAGAGCG+AGG | 0.704711 | 3_1:-89300268 | None:intergenic |
| GATACCCTATGTGTGTGTGT+GGG | 0.725140 | 3_1:-89292336 | None:intergenic |
| TGTTGCACACACAAACGCTG+AGG | 0.726307 | 3_1:-89300495 | None:intergenic |
| AGTAGAAAGAAGTACCCAAG+GGG | 0.729323 | 3_1:-89299039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATCAATCAAATA+CGG | + | chr3_1:89293126-89293145 | Msa0385670:intron | 10.0% |
| !!! | TTTATCTTAATTTATTGTTT+TGG | + | chr3_1:89293346-89293365 | Msa0385670:intron | 10.0% |
| !! | NNNNNNTCAAAAAGATAATA+TGG | + | chr3_1:89294930-89294949 | Msa0385670:intron | 10.0% |
| !!! | ATAAAACACATTTATAATTT+TGG | - | chr3_1:89295761-89295780 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTGAATAAAAG+TGG | + | chr3_1:89295962-89295981 | Msa0385670:intron | 10.0% |
| !!! | TTTTTTTTTTGAATAAAAGT+GGG | + | chr3_1:89295963-89295982 | Msa0385670:intron | 10.0% |
| !!! | ATTTTTACTCATATTTAATA+CGG | - | chr3_1:89296747-89296766 | None:intergenic | 10.0% |
| !! | ATGTGTATAAATAAAAAAAT+CGG | + | chr3_1:89296773-89296792 | Msa0385670:intron | 10.0% |
| !! | CATGTATAAATTAAAAAATA+AGG | + | chr3_1:89296830-89296849 | Msa0385670:intron | 10.0% |
| !! | AAAAAAAAAAAGAAAAAAAG+GGG | + | chr3_1:89297026-89297045 | Msa0385670:intron | 10.0% |
| !!! | TTTTGCAAAAAAATTTAATA+AGG | + | chr3_1:89298361-89298380 | Msa0385670:intron | 10.0% |
| !!! | AAAAAGTTGATATATTTATA+AGG | - | chr3_1:89298405-89298424 | None:intergenic | 10.0% |
| !!! | AAGTTAAAGAAATTTTTTAA+AGG | + | chr3_1:89298595-89298614 | Msa0385670:intron | 10.0% |
| !!! | TCTTTTATAATTTTTTTTGT+AGG | - | chr3_1:89299119-89299138 | None:intergenic | 10.0% |
| !!! | TAAAAGAAAAAGTATTATTT+TGG | + | chr3_1:89299132-89299151 | Msa0385670:intron | 10.0% |
| !! | CAAAAAAAAAAAAAAAACTA+TGG | + | chr3_1:89299252-89299271 | Msa0385670:intron | 10.0% |
| !! | ATATTTGATATATTGTTTAT+TGG | - | chr3_1:89299589-89299608 | None:intergenic | 10.0% |
| !! | TTATGTTGTATTAATTATTA+AGG | + | chr3_1:89302075-89302094 | Msa0385670:intron | 10.0% |
| !!! | ATTATATTTTGAATAACAAA+GGG | - | chr3_1:89302225-89302244 | None:intergenic | 10.0% |
| !!! | AATTATATTTTGAATAACAA+AGG | - | chr3_1:89302226-89302245 | None:intergenic | 10.0% |
| !!! | AATATTTTTGTTAGAAAAAT+AGG | + | chr3_1:89302347-89302366 | Msa0385670:intron | 10.0% |
| !!! | ATACATAAAATATATTGATT+AGG | + | chr3_1:89302378-89302397 | Msa0385670:intron | 10.0% |
| !!! | AATGCTATTTATTTTATTTT+TGG | + | chr3_1:89302501-89302520 | Msa0385670:intron | 10.0% |
| !!! | CATTTGTATTTTTTTTTTTA+GGG | - | chr3_1:89303218-89303237 | None:intergenic | 10.0% |
| !!! | ACATTTGTATTTTTTTTTTT+AGG | - | chr3_1:89303219-89303238 | None:intergenic | 10.0% |
| !!! | ATAACTGTTTTTAAATTATT+AGG | - | chr3_1:89303284-89303303 | None:intergenic | 10.0% |
| !! | TTATAAGTTATAGTACATAT+TGG | + | chr3_1:89292364-89292383 | Msa0385670:five_prime_UTR | 15.0% |
| !! | AGATAAAAAGTAAAAACATA+AGG | - | chr3_1:89293333-89293352 | None:intergenic | 15.0% |
| !!! | ATAATTTGTATACATAAACA+AGG | + | chr3_1:89293425-89293444 | Msa0385670:intron | 15.0% |
| !! | TAATTATATCATTACATGTA+AGG | - | chr3_1:89293671-89293690 | None:intergenic | 15.0% |
| !!! | AAAACATCTATTTTTGAATT+AGG | + | chr3_1:89295043-89295062 | Msa0385670:intron | 15.0% |
| !!! | AAAAAATCGTAATTTTACAT+CGG | - | chr3_1:89295121-89295140 | None:intergenic | 15.0% |
| !!! | CGATTTTTTTAAAAAAAATC+AGG | + | chr3_1:89295132-89295151 | Msa0385670:intron | 15.0% |
| !!! | AAAACATCTATTTTTGAATT+AGG | + | chr3_1:89295043-89295062 | Msa0385670:intron | 15.0% |
| !!! | CGATTTTTTTTAAAAAAATC+AGG | + | chr3_1:89295317-89295336 | Msa0385670:intron | 15.0% |
| !! | CTTATTAAAAAAAATGTGTT+TGG | + | chr3_1:89295600-89295619 | Msa0385670:intron | 15.0% |
| !! | TACATATAAAATGACAAAAA+AGG | + | chr3_1:89295648-89295667 | Msa0385670:intron | 15.0% |
| !!! | TATTATATAAATTTAGAGCA+AGG | + | chr3_1:89295857-89295876 | Msa0385670:intron | 15.0% |
| !! | TAAATTAATGAGGTTAAAAT+TGG | + | chr3_1:89296036-89296055 | Msa0385670:intron | 15.0% |
| !! | TATTAGATTTAAAAAGAACT+AGG | + | chr3_1:89296457-89296476 | Msa0385670:intron | 15.0% |
| !!! | TTTAATTCATTTTCAACAAA+TGG | - | chr3_1:89296534-89296553 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGAAAAAAAGG+GGG | + | chr3_1:89297027-89297046 | Msa0385670:intron | 15.0% |
| !!! | TTTTTTTTTTGAGCAATAAT+TGG | - | chr3_1:89297116-89297135 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTCCAACTTTAT+CGG | + | chr3_1:89297420-89297439 | Msa0385670:intron | 15.0% |
| !!! | ATGGTAGTATATTTTTAATT+GGG | - | chr3_1:89298044-89298063 | None:intergenic | 15.0% |
| !!! | TATGGTAGTATATTTTTAAT+TGG | - | chr3_1:89298045-89298064 | None:intergenic | 15.0% |
| !!! | ATCTAAAAAAAAGTACAATA+TGG | - | chr3_1:89298063-89298082 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTAGATAAAAAG+AGG | + | chr3_1:89298069-89298088 | Msa0385670:intron | 15.0% |
| !!! | CTTTTTTTTAGATAAAAAGA+GGG | + | chr3_1:89298070-89298089 | Msa0385670:intron | 15.0% |
| !!! | TTTTTTTTTTGAAGTAGAAA+GGG | - | chr3_1:89298266-89298285 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGAAGTAGAA+AGG | - | chr3_1:89298267-89298286 | None:intergenic | 15.0% |
| !!! | AAACTCATTTATTTTAGAAA+GGG | - | chr3_1:89298299-89298318 | None:intergenic | 15.0% |
| !!! | AAAACTCATTTATTTTAGAA+AGG | - | chr3_1:89298300-89298319 | None:intergenic | 15.0% |
| !!! | AGTTGAATGAAAATTTTAAA+GGG | - | chr3_1:89298437-89298456 | None:intergenic | 15.0% |
| !!! | AAGTTGAATGAAAATTTTAA+AGG | - | chr3_1:89298438-89298457 | None:intergenic | 15.0% |
| !! | TAATATAAAACACAAATCTA+TGG | + | chr3_1:89299217-89299236 | Msa0385670:intron | 15.0% |
| !!! | AATTATCTAAAATTGATTGT+AGG | - | chr3_1:89299711-89299730 | None:intergenic | 15.0% |
| !!! | AAATGACAAAATAAAAGTTT+TGG | - | chr3_1:89299976-89299995 | None:intergenic | 15.0% |
| !! | TTGCTTTATAAATATAATGT+AGG | + | chr3_1:89300412-89300431 | Msa0385670:intron | 15.0% |
| !! | CACTATTAAATTTATTATCT+AGG | + | chr3_1:89300873-89300892 | Msa0385670:intron | 15.0% |
| !!! | TTTTAAAAATGTGGAATTTA+AGG | + | chr3_1:89300986-89301005 | Msa0385670:intron | 15.0% |
| !!! | ATATTTCTGTGATTAATAAT+TGG | + | chr3_1:89301141-89301160 | Msa0385670:intron | 15.0% |
| !!! | GTAGTAAATTATTTTATAAG+TGG | + | chr3_1:89301993-89302012 | Msa0385670:intron | 15.0% |
| !!! | TTATATTTTGAATAACAAAG+GGG | - | chr3_1:89302224-89302243 | None:intergenic | 15.0% |
| !! | ATGCTTATAATATATTAAGT+TGG | + | chr3_1:89302528-89302547 | Msa0385670:intron | 15.0% |
| !! | AATTAACTTATAATCATGAG+TGG | + | chr3_1:89292493-89292512 | Msa0385670:exon | 20.0% |
| !! | ATTAACTTATAATCATGAGT+GGG | + | chr3_1:89292494-89292513 | Msa0385670:exon | 20.0% |
| !! | GCAAAAATATTGATGTATAT+TGG | - | chr3_1:89292715-89292734 | None:intergenic | 20.0% |
| !!! | TTAATATCTTAGACTTTTGT+TGG | - | chr3_1:89293061-89293080 | None:intergenic | 20.0% |
| !!! | TAATATCACTTTTTTCAGAT+TGG | + | chr3_1:89293516-89293535 | Msa0385670:intron | 20.0% |
| !! | ATTGCCATAAAATAGATAAA+TGG | + | chr3_1:89293612-89293631 | Msa0385670:intron | 20.0% |
| !!! | ATGACCATTTATCTATTTTA+TGG | - | chr3_1:89293619-89293638 | None:intergenic | 20.0% |
| !! | ACTTTCTTGGTAAAAAAATT+GGG | - | chr3_1:89294354-89294373 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTCCAGAATGAA+GGG | - | chr3_1:89294659-89294678 | None:intergenic | 20.0% |
| !! | TCTTTCAAAATAAATAGTCA+CGG | - | chr3_1:89295159-89295178 | None:intergenic | 20.0% |
| !! | TCTTTCAAAATAAATAGTCA+CGG | - | chr3_1:89295159-89295178 | None:intergenic | 20.0% |
| !! | TTAACTTATATATTTACACG+AGG | - | chr3_1:89296800-89296819 | None:intergenic | 20.0% |
| !! | AAAAAAAAAGAAAAAAAGGG+GGG | + | chr3_1:89297028-89297047 | Msa0385670:intron | 20.0% |
| !! | CCAAATCTAATAACAATAAT+TGG | - | chr3_1:89297143-89297162 | None:intergenic | 20.0% |
| !!! | CCAATTATTGTTATTAGATT+TGG | + | chr3_1:89297140-89297159 | Msa0385670:intron | 20.0% |
| !!! | GGGGATATTTTTATTTTTTA+GGG | - | chr3_1:89297167-89297186 | None:intergenic | 20.0% |
| !!! | TGGGGATATTTTTATTTTTT+AGG | - | chr3_1:89297168-89297187 | None:intergenic | 20.0% |
| !!! | GCTTTTAAGTTAAAGAAAAA+CGG | - | chr3_1:89297320-89297339 | None:intergenic | 20.0% |
| !! | AACAAAATATTCACAAAGAT+TGG | + | chr3_1:89297537-89297556 | Msa0385670:intron | 20.0% |
| !! | TTTCTATAGTATTGCTATAA+AGG | - | chr3_1:89297597-89297616 | None:intergenic | 20.0% |
| !! | TTTCCAACTTATATTTCATT+GGG | + | chr3_1:89297950-89297969 | Msa0385670:intron | 20.0% |
| !!! | TGGTAGTATATTTTTAATTG+GGG | - | chr3_1:89298043-89298062 | None:intergenic | 20.0% |
| !!! | TTTTTTATTTTTCTACGTGT+AGG | - | chr3_1:89298096-89298115 | None:intergenic | 20.0% |
| !! | TAGTGATTGAAAATTCTATA+CGG | - | chr3_1:89298466-89298485 | None:intergenic | 20.0% |
| !! | TTTACATATGAGTTTACTTA+AGG | + | chr3_1:89298532-89298551 | Msa0385670:intron | 20.0% |
| !! | ATTTAATCCAATTAATAACC+TGG | + | chr3_1:89298661-89298680 | Msa0385670:intron | 20.0% |
| !! | AAAGAATTAAAGAATCAAGA+GGG | - | chr3_1:89298852-89298871 | None:intergenic | 20.0% |
| !! | TAAAGAATTAAAGAATCAAG+AGG | - | chr3_1:89298853-89298872 | None:intergenic | 20.0% |
| !!! | TTGAATTTGACATTGTTTTA+TGG | + | chr3_1:89299085-89299104 | Msa0385670:intron | 20.0% |
| !! | TTCACTCAATAATAAAAAGT+TGG | - | chr3_1:89299317-89299336 | None:intergenic | 20.0% |
| !!! | GATTCACATAAATTTTCATT+TGG | + | chr3_1:89299386-89299405 | Msa0385670:intron | 20.0% |
| !! | TCAAATATAATTATCTCTAG+TGG | + | chr3_1:89299601-89299620 | Msa0385670:intron | 20.0% |
| !!! | CAAATTTCTGAAATGTTATT+TGG | - | chr3_1:89300331-89300350 | None:intergenic | 20.0% |
| !!! | CATATTGTTCATTTTGAATT+TGG | - | chr3_1:89300357-89300376 | None:intergenic | 20.0% |
| !! | GAGAAAACATAATTGATATA+GGG | - | chr3_1:89300613-89300632 | None:intergenic | 20.0% |
| !! | AAATTTATTTCATAGCAACA+AGG | - | chr3_1:89301100-89301119 | None:intergenic | 20.0% |
| !! | AGAAACACATATTTATGAAT+AGG | + | chr3_1:89301266-89301285 | Msa0385670:intron | 20.0% |
| !! | TAATACAACATAAAATGAGA+AGG | - | chr3_1:89302068-89302087 | None:intergenic | 20.0% |
| !! | TGATTAGGAAAAAAATTGAA+TGG | + | chr3_1:89302393-89302412 | Msa0385670:intron | 20.0% |
| !! | TTCTTTCTTGTCTAATTATA+TGG | + | chr3_1:89302849-89302868 | Msa0385670:intron | 20.0% |
| !! | AACTAAAATTAAGACAAAGA+CGG | - | chr3_1:89303175-89303194 | None:intergenic | 20.0% |
| ! | CTTATCATGTTATATAGAGA+GGG | + | chr3_1:89292440-89292459 | Msa0385670:five_prime_UTR | 25.0% |
| ! | ATGGAGAAATTGAATATGTA+TGG | + | chr3_1:89292523-89292542 | Msa0385670:CDS | 25.0% |
| ! | TGGAGAAATTGAATATGTAT+GGG | + | chr3_1:89292524-89292543 | Msa0385670:CDS | 25.0% |
| ! | CGATAAATTATGAAGAAAGA+CGG | - | chr3_1:89292569-89292588 | None:intergenic | 25.0% |
| ! | TCATAATTTATCGACATTCA+TGG | + | chr3_1:89292576-89292595 | Msa0385670:CDS | 25.0% |
| ! | AGATTCTCCAGAATAATAAA+GGG | - | chr3_1:89292878-89292897 | None:intergenic | 25.0% |
| ! | AATTGTGGTGATTTGATATT+AGG | + | chr3_1:89293195-89293214 | Msa0385670:intron | 25.0% |
| ! | ATATCATTACATGTAAGGAA+AGG | - | chr3_1:89293666-89293685 | None:intergenic | 25.0% |
| ! | TTTGTTCTTCCAAGAATATA+TGG | + | chr3_1:89293704-89293723 | Msa0385670:intron | 25.0% |
| ! | AAGCATGAAAGATTGAAATT+TGG | - | chr3_1:89294166-89294185 | None:intergenic | 25.0% |
| ! | CACTTTCTTGGTAAAAAAAT+TGG | - | chr3_1:89294355-89294374 | None:intergenic | 25.0% |
| ! | TCTTAACTATAACACTTTCT+TGG | - | chr3_1:89294367-89294386 | None:intergenic | 25.0% |
| !!! | GTAAATTTTTTCCAGAATGA+AGG | - | chr3_1:89294660-89294679 | None:intergenic | 25.0% |
| !!! | TTTCACTTTTTTCTTCTTCA+TGG | + | chr3_1:89295074-89295093 | Msa0385670:intron | 25.0% |
| ! | CTTTCAAAATAAATAGTCAC+GGG | - | chr3_1:89295158-89295177 | None:intergenic | 25.0% |
| !!! | TTTCACTTTTTTCTTCTTCA+TGG | + | chr3_1:89295074-89295093 | Msa0385670:intron | 25.0% |
| ! | CTTTCAAAATAAATAGTCAC+GGG | - | chr3_1:89295158-89295177 | None:intergenic | 25.0% |
| ! | GTTGTGTTTAAATATGAACA+TGG | + | chr3_1:89295405-89295424 | Msa0385670:intron | 25.0% |
| ! | GATATGGTATGTATCAAATA+TGG | + | chr3_1:89295471-89295490 | Msa0385670:intron | 25.0% |
| ! | AATAATTGGTCATTTGGTAA+GGG | - | chr3_1:89297102-89297121 | None:intergenic | 25.0% |
| !!! | AAGCTAACAACTTATTTTGT+TGG | + | chr3_1:89297336-89297355 | Msa0385670:intron | 25.0% |
| !!! | TTTTCTTGTTGTATACATTG+TGG | + | chr3_1:89297443-89297462 | Msa0385670:intron | 25.0% |
| !!! | TGTGAATATTTTGTTTTTGC+TGG | - | chr3_1:89297532-89297551 | None:intergenic | 25.0% |
| ! | AAGTATAATAGGTTATAACC+TGG | + | chr3_1:89297744-89297763 | Msa0385670:intron | 25.0% |
| !! | TACCTATTTTATCAAAGCTT+AGG | + | chr3_1:89297924-89297943 | Msa0385670:intron | 25.0% |
| !! | TACCTAAGCTTTGATAAAAT+AGG | - | chr3_1:89297929-89297948 | None:intergenic | 25.0% |
| ! | GTTTCCAACTTATATTTCAT+TGG | + | chr3_1:89297949-89297968 | Msa0385670:intron | 25.0% |
| !! | GTACATTTATCTTGTGTTTT+TGG | - | chr3_1:89297993-89298012 | None:intergenic | 25.0% |
| !!! | GGTAGTATATTTTTAATTGG+GGG | - | chr3_1:89298042-89298061 | None:intergenic | 25.0% |
| ! | CAACTTAATTAAACAACGAA+TGG | + | chr3_1:89298121-89298140 | Msa0385670:intron | 25.0% |
| !! | GAATTTTCAATCACTACTAT+TGG | + | chr3_1:89298470-89298489 | Msa0385670:intron | 25.0% |
| !! | AAATTGATTTATCACATTCC+AGG | - | chr3_1:89298682-89298701 | None:intergenic | 25.0% |
| ! | AGTACATAATTCAAGTGTTT+AGG | + | chr3_1:89299281-89299300 | Msa0385670:intron | 25.0% |
| ! | AATTCTTAGATCATACTAGT+AGG | + | chr3_1:89299337-89299356 | Msa0385670:intron | 25.0% |
| ! | GAAAAACTTATTACTAGTCA+AGG | + | chr3_1:89299463-89299482 | Msa0385670:intron | 25.0% |
| ! | GTGAGAAATGTCTATATAAT+TGG | + | chr3_1:89299560-89299579 | Msa0385670:intron | 25.0% |
| ! | AATATAATTATCTCTAGTGG+AGG | + | chr3_1:89299604-89299623 | Msa0385670:intron | 25.0% |
| !! | TTTTCACAACTACTTTCAAA+TGG | + | chr3_1:89299729-89299748 | Msa0385670:intron | 25.0% |
| ! | GTTAATGTAGCTAAAATGTA+TGG | + | chr3_1:89299751-89299770 | Msa0385670:intron | 25.0% |
| ! | TTCAAATTTCACAATTGTGT+GGG | + | chr3_1:89300002-89300021 | Msa0385670:intron | 25.0% |
| ! | AAAAGAAAATGCAGAGAAAT+TGG | - | chr3_1:89300307-89300326 | None:intergenic | 25.0% |
| ! | ACATAATTGATATAGGGATT+TGG | - | chr3_1:89300607-89300626 | None:intergenic | 25.0% |
| ! | GGAGAAAACATAATTGATAT+AGG | - | chr3_1:89300614-89300633 | None:intergenic | 25.0% |
| !!! | TTCCGTTTATTTTAGCAATT+GGG | - | chr3_1:89300759-89300778 | None:intergenic | 25.0% |
| !!! | TTTCCGTTTATTTTAGCAAT+TGG | - | chr3_1:89300760-89300779 | None:intergenic | 25.0% |
| !! | AACATAAAATGAGAAGGTAT+TGG | - | chr3_1:89302062-89302081 | None:intergenic | 25.0% |
| ! | TTCCTCATTCTATATATCTT+TGG | + | chr3_1:89302177-89302196 | Msa0385670:intron | 25.0% |
| ! | AACCAAAGATATATAGAATG+AGG | - | chr3_1:89302182-89302201 | None:intergenic | 25.0% |
| !! | AAGGGGAAAGTATATTTAAA+AGG | - | chr3_1:89302207-89302226 | None:intergenic | 25.0% |
| ! | AGGTATCATGTTAATAGTAT+TGG | + | chr3_1:89302316-89302335 | Msa0385670:intron | 25.0% |
| !!! | ATGTTAATAGTATTGGTTAG+TGG | + | chr3_1:89302323-89302342 | Msa0385670:intron | 25.0% |
| !! | TTCCTTTTATTGTGTTCTTA+GGG | - | chr3_1:89302420-89302439 | None:intergenic | 25.0% |
| !!! | GATTAATTTTTGTTTGCAGA+TGG | + | chr3_1:89302882-89302901 | Msa0385670:intron | 25.0% |
| ! | ACAGTTTCTATAGATAAAGA+AGG | - | chr3_1:89303022-89303041 | None:intergenic | 25.0% |
| ! | TAAACAAACAAAATGTCTAC+TGG | - | chr3_1:89303141-89303160 | None:intergenic | 25.0% |
| ! | ACTAAAATTAAGACAAAGAC+GGG | - | chr3_1:89303174-89303193 | None:intergenic | 25.0% |
| GCTTATCATGTTATATAGAG+AGG | + | chr3_1:89292439-89292458 | Msa0385670:five_prime_UTR | 30.0% | |
| ! | ATTTTTGTGAGTGTTTTGCA+TGG | - | chr3_1:89292476-89292495 | None:intergenic | 30.0% |
| ! | TAAAGGGAAAAAGCTAGTTT+AGG | - | chr3_1:89292862-89292881 | None:intergenic | 30.0% |
| !! | GCTTTTTCCCTTTATTATTC+TGG | + | chr3_1:89292868-89292887 | Msa0385670:intron | 30.0% |
| CAGATTCTCCAGAATAATAA+AGG | - | chr3_1:89292879-89292898 | None:intergenic | 30.0% | |
| CCAATCAAACTCTAGATTAT+GGG | - | chr3_1:89292927-89292946 | None:intergenic | 30.0% | |
| TCCAATCAAACTCTAGATTA+TGG | - | chr3_1:89292928-89292947 | None:intergenic | 30.0% | |
| !! | CAAATCACCACAATTTTGAT+TGG | - | chr3_1:89293190-89293209 | None:intergenic | 30.0% |
| ACAAATTATGTGTACTCTTG+CGG | - | chr3_1:89293414-89293433 | None:intergenic | 30.0% | |
| TTCAATCAAATCACGAAAAG+TGG | - | chr3_1:89293566-89293585 | None:intergenic | 30.0% | |
| ATAGATAAATGGTCATGAGT+TGG | + | chr3_1:89293623-89293642 | Msa0385670:intron | 30.0% | |
| GAGGATTATCCATATATTCT+TGG | - | chr3_1:89293716-89293735 | None:intergenic | 30.0% | |
| TGGTTGCAAAATCAATTTAG+TGG | + | chr3_1:89294038-89294057 | Msa0385670:intron | 30.0% | |
| GGTTGCAAAATCAATTTAGT+GGG | + | chr3_1:89294039-89294058 | Msa0385670:intron | 30.0% | |
| GTTGCAAAATCAATTTAGTG+GGG | + | chr3_1:89294040-89294059 | Msa0385670:intron | 30.0% | |
| !! | GGACATCAGTTTTAACAATT+AGG | - | chr3_1:89294471-89294490 | None:intergenic | 30.0% |
| AATGTGTTTGGTAAAACTAG+CGG | + | chr3_1:89295612-89295631 | Msa0385670:intron | 30.0% | |
| TAGAGCAAGGTAATAAGAAA+AGG | + | chr3_1:89295870-89295889 | Msa0385670:intron | 30.0% | |
| ! | TGGGTTGTTACTTATAAATG+TGG | + | chr3_1:89295982-89296001 | Msa0385670:intron | 30.0% |
| ! | GGGTTGTTACTTATAAATGT+GGG | + | chr3_1:89295983-89296002 | Msa0385670:intron | 30.0% |
| TAGCTTATAACTGGTTGAAT+TGG | - | chr3_1:89296191-89296210 | None:intergenic | 30.0% | |
| TTAATTCTCCACCTAGTTAT+AGG | - | chr3_1:89296238-89296257 | None:intergenic | 30.0% | |
| ! | TAAAGCGCTTGTATTACAAT+GGG | - | chr3_1:89296338-89296357 | None:intergenic | 30.0% |
| ! | TTAAAGCGCTTGTATTACAA+TGG | - | chr3_1:89296339-89296358 | None:intergenic | 30.0% |
| AAATTTCCACTTCTTTCTTG+TGG | + | chr3_1:89296367-89296386 | Msa0385670:intron | 30.0% | |
| ATCTGGACTCAAAATATTAG+TGG | + | chr3_1:89296404-89296423 | Msa0385670:intron | 30.0% | |
| TCTGGACTCAAAATATTAGT+GGG | + | chr3_1:89296405-89296424 | Msa0385670:intron | 30.0% | |
| ATAATTGGTCATTTGGTAAG+GGG | - | chr3_1:89297101-89297120 | None:intergenic | 30.0% | |
| CAATAATTGGTCATTTGGTA+AGG | - | chr3_1:89297103-89297122 | None:intergenic | 30.0% | |
| TTGAGCAATAATTGGTCATT+TGG | - | chr3_1:89297108-89297127 | None:intergenic | 30.0% | |
| AAAAATATCCCCATTCATTG+AGG | + | chr3_1:89297175-89297194 | Msa0385670:intron | 30.0% | |
| AAAATATCCCCATTCATTGA+GGG | + | chr3_1:89297176-89297195 | Msa0385670:intron | 30.0% | |
| AAAATATCCACGAAAAATCG+AGG | - | chr3_1:89297406-89297425 | None:intergenic | 30.0% | |
| AACAAGAAAACCGATAAAGT+TGG | - | chr3_1:89297433-89297452 | None:intergenic | 30.0% | |
| ! | AAGACTCTTTTGTCTATTGA+CGG | - | chr3_1:89297501-89297520 | None:intergenic | 30.0% |
| !!! | ATATTTTGTTTTTGCTGGCT+TGG | - | chr3_1:89297527-89297546 | None:intergenic | 30.0% |
| ! | GTATTTTCGTCAGTTTGTAT+GGG | - | chr3_1:89297854-89297873 | None:intergenic | 30.0% |
| ! | AGTATTTTCGTCAGTTTGTA+TGG | + | chr3_1:89297853-89297872 | Msa0385670:intron | 30.0% |
| ! | GTATTTTCGTCAGTTTGTAT+GGG | + | chr3_1:89297854-89297873 | Msa0385670:intron | 30.0% |
| ! | AAGAGCAATTTCCATTTTGT+TGG | + | chr3_1:89297899-89297918 | Msa0385670:intron | 30.0% |
| ! | AGAGCAATTTCCATTTTGTT+GGG | + | chr3_1:89297900-89297919 | Msa0385670:intron | 30.0% |
| !! | TTTTGGTTGATATTTCCACT+GGG | - | chr3_1:89297976-89297995 | None:intergenic | 30.0% |
| !!! | TTTTTGGTTGATATTTCCAC+TGG | - | chr3_1:89297977-89297996 | None:intergenic | 30.0% |
| !! | AGTATATTTTTAATTGGGGG+TGG | - | chr3_1:89298039-89298058 | None:intergenic | 30.0% |
| !! | TCTAGTTAGACACTTGTTAT+CGG | - | chr3_1:89298161-89298180 | None:intergenic | 30.0% |
| TTGTAAAGAGAATTGTTGTG+CGG | - | chr3_1:89298223-89298242 | None:intergenic | 30.0% | |
| ! | TGAAGGTGGAAAACTTTTTA+AGG | + | chr3_1:89298567-89298586 | Msa0385670:intron | 30.0% |
| TCACATTCCAGGTTATTAAT+TGG | - | chr3_1:89298671-89298690 | None:intergenic | 30.0% | |
| CAGTTTGAAAATGAACCAAA+TGG | - | chr3_1:89299365-89299384 | None:intergenic | 30.0% | |
| AAACTTATTACTAGTCAAGG+AGG | + | chr3_1:89299466-89299485 | Msa0385670:intron | 30.0% | |
| CAACATAACTTCATTAACCA+CGG | + | chr3_1:89299828-89299847 | Msa0385670:intron | 30.0% | |
| ATTAATCACGTTTAAATCCG+TGG | - | chr3_1:89299848-89299867 | None:intergenic | 30.0% | |
| GTTCAAATTTCACAATTGTG+TGG | + | chr3_1:89300001-89300020 | Msa0385670:intron | 30.0% | |
| ! | ATCATTAACATGATTTGCGA+TGG | + | chr3_1:89300233-89300252 | Msa0385670:CDS | 30.0% |
| TAATTGATATAGGGATTTGG+TGG | - | chr3_1:89300604-89300623 | None:intergenic | 30.0% | |
| ! | TGTTTTCTCCTTCAACATTA+AGG | + | chr3_1:89300624-89300643 | Msa0385670:intron | 30.0% |
| AGTTGAAACCTTAATGTTGA+AGG | - | chr3_1:89300635-89300654 | None:intergenic | 30.0% | |
| ! | TAAGGTTTCAACTTTTGTTG+CGG | + | chr3_1:89300642-89300661 | Msa0385670:intron | 30.0% |
| ! | TGTACATGCAAATTTTCCTT+CGG | + | chr3_1:89300677-89300696 | Msa0385670:CDS | 30.0% |
| !!! | GGTATAAAGTTGGTTTTCAT+CGG | - | chr3_1:89300713-89300732 | None:intergenic | 30.0% |
| AAATGATTGGGGTATAAAGT+TGG | - | chr3_1:89300723-89300742 | None:intergenic | 30.0% | |
| !!! | TCCGTTTATTTTAGCAATTG+GGG | - | chr3_1:89300758-89300777 | None:intergenic | 30.0% |
| AAAGGAGGTTATATCTCTTA+AGG | - | chr3_1:89300821-89300840 | None:intergenic | 30.0% | |
| TCTTGCTGCAAATTAGAATA+TGG | - | chr3_1:89301326-89301345 | None:intergenic | 30.0% | |
| TGTCATCACAAACTAAGTTA+AGG | - | chr3_1:89301475-89301494 | None:intergenic | 30.0% | |
| TTGTGTGCAGTATTACTTAA+AGG | + | chr3_1:89301504-89301523 | Msa0385670:intron | 30.0% | |
| ACCAGAAATGATCATTAAGT+CGG | - | chr3_1:89301560-89301579 | None:intergenic | 30.0% | |
| ATTAAGGTATACGTGTTTAC+AGG | + | chr3_1:89302091-89302110 | Msa0385670:intron | 30.0% | |
| ! | TCCTTTTATTGTGTTCTTAG+GGG | - | chr3_1:89302419-89302438 | None:intergenic | 30.0% |
| ! | CTTCCTTTTATTGTGTTCTT+AGG | - | chr3_1:89302421-89302440 | None:intergenic | 30.0% |
| CAATAAAAGGAAGACATGAT+TGG | + | chr3_1:89302428-89302447 | Msa0385670:intron | 30.0% | |
| TTTCTCACTTATCTTCTTTC+AGG | + | chr3_1:89302558-89302577 | Msa0385670:intron | 30.0% | |
| TTCTCACTTATCTTCTTTCA+GGG | + | chr3_1:89302559-89302578 | Msa0385670:intron | 30.0% | |
| GTAATATGAACATGCATGAT+GGG | - | chr3_1:89302683-89302702 | None:intergenic | 30.0% | |
| AGTAATATGAACATGCATGA+TGG | - | chr3_1:89302684-89302703 | None:intergenic | 30.0% | |
| TAGAGCTGAAAAAAGAGAAT+AGG | - | chr3_1:89302728-89302747 | None:intergenic | 30.0% | |
| !! | AGCTCTATTTCTATCTGAAA+AGG | + | chr3_1:89302741-89302760 | Msa0385670:intron | 30.0% |
| AATGTGTATTGGAATTGCTT+CGG | + | chr3_1:89302792-89302811 | Msa0385670:CDS | 30.0% | |
| TATGTCCATCTAACTCAAAA+TGG | - | chr3_1:89302947-89302966 | None:intergenic | 30.0% | |
| TCGTCAATATTTACTCATAG+TGG | + | chr3_1:89302993-89303012 | Msa0385670:three_prime_UTR | 30.0% | |
| !! | TTGCATTCCAGTTTTGTACA+TGG | + | chr3_1:89292417-89292436 | Msa0385670:five_prime_UTR | 35.0% |
| TGATAAGCCATGTACAAAAC+TGG | - | chr3_1:89292427-89292446 | None:intergenic | 35.0% | |
| ATCATGTTATATAGAGAGGG+TGG | + | chr3_1:89292443-89292462 | Msa0385670:five_prime_UTR | 35.0% | |
| AATCATGAGTGGGAGAATTA+TGG | + | chr3_1:89292504-89292523 | Msa0385670:exon | 35.0% | |
| TTGAAAACCAGTGAGATAGA+TGG | - | chr3_1:89292668-89292687 | None:intergenic | 35.0% | |
| ACAATCGTCTTCATCGTTTA+TGG | + | chr3_1:89292760-89292779 | Msa0385670:intron | 35.0% | |
| ! | CCCATAATCTAGAGTTTGAT+TGG | + | chr3_1:89292924-89292943 | Msa0385670:intron | 35.0% |
| ! | AGACTTTTGTTGGATACGAA+TGG | - | chr3_1:89293051-89293070 | None:intergenic | 35.0% |
| CTGCAAACCAATCAAAATTG+TGG | + | chr3_1:89293180-89293199 | Msa0385670:intron | 35.0% | |
| GTGGTGATTTGATATTAGGT+TGG | + | chr3_1:89293199-89293218 | Msa0385670:intron | 35.0% | |
| CAAATTATGTGTACTCTTGC+GGG | - | chr3_1:89293413-89293432 | None:intergenic | 35.0% | |
| TTGTAACCTGTAGTTGAAAG+AGG | - | chr3_1:89293934-89293953 | None:intergenic | 35.0% | |
| ! | GTTCAAACTTGAGTTGTGTT+AGG | + | chr3_1:89293990-89294009 | Msa0385670:intron | 35.0% |
| ! | CTAGCAATTTAAAGTACACG+TGG | + | chr3_1:89294018-89294037 | Msa0385670:intron | 35.0% |
| TAGTATTTGATGCTCAAGAG+TGG | - | chr3_1:89294305-89294324 | None:intergenic | 35.0% | |
| AGACACGAAGAGAATGAAAA+AGG | - | chr3_1:89294627-89294646 | None:intergenic | 35.0% | |
| AGACACGAAGAGAATGAAAA+AGG | - | chr3_1:89294627-89294646 | None:intergenic | 35.0% | |
| ! | CATGGATTTTCCAGAATGAA+GGG | - | chr3_1:89294756-89294775 | None:intergenic | 35.0% |
| ! | ACATGGATTTTCCAGAATGA+AGG | - | chr3_1:89294757-89294776 | None:intergenic | 35.0% |
| ! | TTCATTCTGGAAAATCCATG+TGG | + | chr3_1:89294756-89294775 | Msa0385670:intron | 35.0% |
| ! | GTTTAAGATCGATTACCACA+TGG | - | chr3_1:89294774-89294793 | None:intergenic | 35.0% |
| GTGGTAATCGATCTTAAACA+TGG | + | chr3_1:89294775-89294794 | Msa0385670:intron | 35.0% | |
| AATCGATCTTAAACATGGCA+AGG | + | chr3_1:89294780-89294799 | Msa0385670:intron | 35.0% | |
| ATCGATCTTAAACATGGCAA+GGG | + | chr3_1:89294781-89294800 | Msa0385670:intron | 35.0% | |
| TAGAAAAACTACCACATGAG+CGG | + | chr3_1:89295906-89295925 | Msa0385670:intron | 35.0% | |
| !! | TTTCAAGTAGCTTTTGAGCT+TGG | - | chr3_1:89296087-89296106 | None:intergenic | 35.0% |
| ! | GAATTGGCTTAAAAGCTTGT+TGG | - | chr3_1:89296175-89296194 | None:intergenic | 35.0% |
| ! | ACAAGAAGCTAGCTTATAAC+TGG | - | chr3_1:89296200-89296219 | None:intergenic | 35.0% |
| CTAGGTGGAGAATTAAAGAA+CGG | + | chr3_1:89296242-89296261 | Msa0385670:intron | 35.0% | |
| TTCTTTCTTGTGGTACCATA+GGG | + | chr3_1:89296377-89296396 | Msa0385670:intron | 35.0% | |
| CTGGACTCAAAATATTAGTG+GGG | + | chr3_1:89296406-89296425 | Msa0385670:intron | 35.0% | |
| AAATATCCCCATTCATTGAG+GGG | + | chr3_1:89297177-89297196 | Msa0385670:intron | 35.0% | |
| !!! | TTTTTTCCCCTCAATGAATG+GGG | - | chr3_1:89297186-89297205 | None:intergenic | 35.0% |
| !!! | CTTTTTTCCCCTCAATGAAT+GGG | - | chr3_1:89297187-89297206 | None:intergenic | 35.0% |
| AACTTACCAACACAGACAAA+CGG | - | chr3_1:89297234-89297253 | None:intergenic | 35.0% | |
| AACAAAGCAATGAATCACAC+TGG | - | chr3_1:89297379-89297398 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCCTCGATTTTTCG+TGG | + | chr3_1:89297396-89297415 | Msa0385670:intron | 35.0% |
| !! | ACATTGTGGTTTTACGTTGA+TGG | + | chr3_1:89297457-89297476 | Msa0385670:intron | 35.0% |
| GCAATACTATAGAAAGAGCA+TGG | + | chr3_1:89297602-89297621 | Msa0385670:intron | 35.0% | |
| ! | GGTATTTTCGTCAGTTTGTA+TGG | - | chr3_1:89297674-89297693 | None:intergenic | 35.0% |
| AACTCACGCTGAAGTATAAT+AGG | + | chr3_1:89297733-89297752 | Msa0385670:intron | 35.0% | |
| ! | TTAAGTCACGTTTGCTACAT+TGG | - | chr3_1:89297794-89297813 | None:intergenic | 35.0% |
| AAATAGGTAGCCCAACAAAA+TGG | - | chr3_1:89297913-89297932 | None:intergenic | 35.0% | |
| !! | ATATTTTTAATTGGGGGTGG+AGG | - | chr3_1:89298036-89298055 | None:intergenic | 35.0% |
| ! | AAGTTTTCCACCTTCACTTT+TGG | - | chr3_1:89298563-89298582 | None:intergenic | 35.0% |
| ATTGTCTAGAAGTTCGATCA+TGG | - | chr3_1:89298716-89298735 | None:intergenic | 35.0% | |
| ! | TGTGAAGTTTTGCAGATGAT+AGG | + | chr3_1:89298920-89298939 | Msa0385670:intron | 35.0% |
| ! | AGTTTTGCAGATGATAGGAA+TGG | + | chr3_1:89298925-89298944 | Msa0385670:intron | 35.0% |
| ! | GTTTTGCAGATGATAGGAAT+GGG | + | chr3_1:89298926-89298945 | Msa0385670:intron | 35.0% |
| GTGATCTCTCTGATAAGTAT+GGG | + | chr3_1:89298975-89298994 | Msa0385670:CDS | 35.0% | |
| !! | AAGTAGAAAGAAGTACCCAA+GGG | - | chr3_1:89299043-89299062 | None:intergenic | 35.0% |
| !! | AAAGTAGAAAGAAGTACCCA+AGG | - | chr3_1:89299044-89299063 | None:intergenic | 35.0% |
| TCATACTAGTAGGTTCCATT+TGG | + | chr3_1:89299347-89299366 | Msa0385670:intron | 35.0% | |
| GTTTGAGAATCTAGCATTCA+TGG | + | chr3_1:89299657-89299676 | Msa0385670:intron | 35.0% | |
| GGTTAATGAAGTTATGTTGG+TGG | - | chr3_1:89299827-89299846 | None:intergenic | 35.0% | |
| CGTGGTTAATGAAGTTATGT+TGG | - | chr3_1:89299830-89299849 | None:intergenic | 35.0% | |
| AAATTTCACAATTGTGTGGG+TGG | + | chr3_1:89300005-89300024 | Msa0385670:intron | 35.0% | |
| AATTTCACAATTGTGTGGGT+GGG | + | chr3_1:89300006-89300025 | Msa0385670:intron | 35.0% | |
| TACTGCGCAACATATACAAA+AGG | - | chr3_1:89300066-89300085 | None:intergenic | 35.0% | |
| TATGTTGCGCAGTAATCAAA+TGG | + | chr3_1:89300072-89300091 | Msa0385670:intron | 35.0% | |
| TGTTTGTAATGTACTGCTTC+TGG | + | chr3_1:89300140-89300159 | Msa0385670:intron | 35.0% | |
| AGAGGAAGTAGCATTAAAAG+AGG | - | chr3_1:89300571-89300590 | None:intergenic | 35.0% | |
| ! | GTACATGCAAATTTTCCTTC+GGG | + | chr3_1:89300678-89300697 | Msa0385670:CDS | 35.0% |
| TATACCCCAATCATTTCACA+AGG | + | chr3_1:89300727-89300746 | Msa0385670:CDS | 35.0% | |
| CTTTCCTTGTGAAATGATTG+GGG | - | chr3_1:89300734-89300753 | None:intergenic | 35.0% | |
| GCTTTCCTTGTGAAATGATT+GGG | - | chr3_1:89300735-89300754 | None:intergenic | 35.0% | |
| !!! | CCGTTTATTTTAGCAATTGG+GGG | - | chr3_1:89300757-89300776 | None:intergenic | 35.0% |
| CCCCCAATTGCTAAAATAAA+CGG | + | chr3_1:89300754-89300773 | Msa0385670:CDS | 35.0% | |
| TAACCTCCTTTCTCAATAGT+AGG | + | chr3_1:89300830-89300849 | Msa0385670:CDS | 35.0% | |
| !!! | GCTTGTTTTGCACTGTAAAT+TGG | + | chr3_1:89300909-89300928 | Msa0385670:intron | 35.0% |
| TGTGGAATTTAAGGATAACC+TGG | + | chr3_1:89300995-89301014 | Msa0385670:intron | 35.0% | |
| TTTCATAGCAACAAGGTAGA+TGG | - | chr3_1:89301093-89301112 | None:intergenic | 35.0% | |
| ACGTGTGATATGCTTTGATA+TGG | + | chr3_1:89301174-89301193 | Msa0385670:intron | 35.0% | |
| GCTGCAAATTAGAATATGGA+TGG | - | chr3_1:89301322-89301341 | None:intergenic | 35.0% | |
| ATACCATCATTGAACCATGA+AGG | - | chr3_1:89301401-89301420 | None:intergenic | 35.0% | |
| TGCAGTATTACTTAAAGGCT+CGG | + | chr3_1:89301509-89301528 | Msa0385670:intron | 35.0% | |
| !! | ATGATCATTTCTGGTATTGC+AGG | + | chr3_1:89301565-89301584 | Msa0385670:CDS | 35.0% |
| !! | TGATCATTTCTGGTATTGCA+GGG | + | chr3_1:89301566-89301585 | Msa0385670:CDS | 35.0% |
| !!! | CCTATTTTTGCTCCTACTTT+GGG | + | chr3_1:89301747-89301766 | Msa0385670:CDS | 35.0% |
| TGTTCATTTACAGCATAGCA+TGG | + | chr3_1:89301906-89301925 | Msa0385670:CDS | 35.0% | |
| TGAGGAATAAAACTCACACA+CGG | - | chr3_1:89302164-89302183 | None:intergenic | 35.0% | |
| ATTAACATGATACCTGCTCA+CGG | - | chr3_1:89302311-89302330 | None:intergenic | 35.0% | |
| ACTTATCTTCTTTCAGGGAA+GGG | + | chr3_1:89302564-89302583 | Msa0385670:intron | 35.0% | |
| !!! | AAGGCACCTTTTAATTTTCC+TGG | + | chr3_1:89302760-89302779 | Msa0385670:CDS | 35.0% |
| CTGAAGCCAGGAAAATTAAA+AGG | - | chr3_1:89302769-89302788 | None:intergenic | 35.0% | |
| ATACACATTATACTGAAGCC+AGG | - | chr3_1:89302781-89302800 | None:intergenic | 35.0% | |
| GGCTTCAGTATAATGTGTAT+TGG | + | chr3_1:89302781-89302800 | Msa0385670:CDS | 35.0% | |
| !!! | TCCTTCCATTTTGAGTTAGA+TGG | + | chr3_1:89302939-89302958 | Msa0385670:exon | 35.0% |
| TCCATCTAACTCAAAATGGA+AGG | - | chr3_1:89302943-89302962 | None:intergenic | 35.0% | |
| ! | TAGAAACTGTGCTTTTGATG+AGG | + | chr3_1:89303032-89303051 | Msa0385670:three_prime_UTR | 35.0% |
| AGATGTGTAGTACATGTATG+TGG | + | chr3_1:89303305-89303324 | Msa0385670:three_prime_UTR | 35.0% | |
| TGCTCTTGTGATTAACTCGA+AGG | + | chr3_1:89292312-89292331 | Msa0385670:five_prime_UTR | 40.0% | |
| ATTGTTACATCGGTGATTGC+TGG | - | chr3_1:89292607-89292626 | None:intergenic | 40.0% | |
| AGCAATCACCGATGTAACAA+TGG | + | chr3_1:89292606-89292625 | Msa0385670:CDS | 40.0% | |
| AAGAGCAGCCATTGTTACAT+CGG | - | chr3_1:89292617-89292636 | None:intergenic | 40.0% | |
| AAGTGAGCATTCATCTTGTC+CGG | - | chr3_1:89292644-89292663 | None:intergenic | 40.0% | |
| !!! | TCTCACTGGTTTTCAACAAG+CGG | + | chr3_1:89292672-89292691 | Msa0385670:CDS | 40.0% |
| !! | CTAGATTATGGGAGTGCTTA+TGG | - | chr3_1:89292916-89292935 | None:intergenic | 40.0% |
| GTGTCCAAACCTTTCACTAA+TGG | + | chr3_1:89294212-89294231 | Msa0385670:intron | 40.0% | |
| ACTGCCATTAGTGAAAGGTT+TGG | - | chr3_1:89294219-89294238 | None:intergenic | 40.0% | |
| AACCTTTCACTAATGGCAGT+TGG | + | chr3_1:89294219-89294238 | Msa0385670:intron | 40.0% | |
| ACCTTTCACTAATGGCAGTT+GGG | + | chr3_1:89294220-89294239 | Msa0385670:intron | 40.0% | |
| ATTTGATGCTCAAGAGTGGA+GGG | - | chr3_1:89294301-89294320 | None:intergenic | 40.0% | |
| TATTTGATGCTCAAGAGTGG+AGG | - | chr3_1:89294302-89294321 | None:intergenic | 40.0% | |
| TAAGCTTAGCTCAGTTGGTT+GGG | + | chr3_1:89294494-89294513 | Msa0385670:intron | 40.0% | |
| TCAACAAAAGCCCTTCATTC+TGG | + | chr3_1:89294646-89294665 | Msa0385670:intron | 40.0% | |
| TCAACAAAAGCCCTTCATTC+TGG | + | chr3_1:89294646-89294665 | Msa0385670:intron | 40.0% | |
| ATCTTAAACATGGCAAGGGA+GGG | + | chr3_1:89294785-89294804 | Msa0385670:intron | 40.0% | |
| TGGTAACAGTGTACTAACGT+GGG | + | chr3_1:89295929-89295948 | Msa0385670:intron | 40.0% | |
| ACCAAACACAGCCTATAACT+AGG | + | chr3_1:89296224-89296243 | Msa0385670:intron | 40.0% | |
| ACCTAGTTATAGGCTGTGTT+TGG | - | chr3_1:89296228-89296247 | None:intergenic | 40.0% | |
| AAACACAGCCTATAACTAGG+TGG | + | chr3_1:89296227-89296246 | Msa0385670:intron | 40.0% | |
| ATGGTACCACAAGAAAGAAG+TGG | - | chr3_1:89296376-89296395 | None:intergenic | 40.0% | |
| CTTCTTTCTTGTGGTACCAT+AGG | + | chr3_1:89296376-89296395 | Msa0385670:intron | 40.0% | |
| TCTTTCTTGTGGTACCATAG+GGG | + | chr3_1:89296378-89296397 | Msa0385670:intron | 40.0% | |
| !!! | GCTTTTTTCCCCTCAATGAA+TGG | - | chr3_1:89297188-89297207 | None:intergenic | 40.0% |
| TAACATCCGTTTGTCTGTGT+TGG | + | chr3_1:89297225-89297244 | Msa0385670:intron | 40.0% | |
| GAAAGTTCTTTGGTTGAGTG+GGG | - | chr3_1:89297260-89297279 | None:intergenic | 40.0% | |
| GGAAAGTTCTTTGGTTGAGT+GGG | - | chr3_1:89297261-89297280 | None:intergenic | 40.0% | |
| AGGAAAGTTCTTTGGTTGAG+TGG | - | chr3_1:89297262-89297281 | None:intergenic | 40.0% | |
| AACCAAAGAACTTTCCTGCT+AGG | + | chr3_1:89297265-89297284 | Msa0385670:intron | 40.0% | |
| AACCTAGCAGGAAAGTTCTT+TGG | - | chr3_1:89297270-89297289 | None:intergenic | 40.0% | |
| !!! | TTTTGTTTTTGCTGGCTTGG+AGG | - | chr3_1:89297524-89297543 | None:intergenic | 40.0% |
| ACGTGACTTAACTCACATGA+GGG | - | chr3_1:89297696-89297715 | None:intergenic | 40.0% | |
| AACGTGACTTAACTCACATG+AGG | - | chr3_1:89297697-89297716 | None:intergenic | 40.0% | |
| TGGATGAGTTAACTTACGCT+GGG | + | chr3_1:89297764-89297783 | Msa0385670:intron | 40.0% | |
| AGCAAACGTGACTTAAGTTC+TGG | + | chr3_1:89297798-89297817 | Msa0385670:intron | 40.0% | |
| GCAAACGTGACTTAAGTTCT+GGG | + | chr3_1:89297799-89297818 | Msa0385670:intron | 40.0% | |
| ! | TTTTCGTCAGTTTGTATGGG+AGG | + | chr3_1:89297857-89297876 | Msa0385670:intron | 40.0% |
| TTTCGTCAGTTTGTATGGGA+GGG | + | chr3_1:89297858-89297877 | Msa0385670:intron | 40.0% | |
| GGGCCCAATGAAATATAAGT+TGG | - | chr3_1:89297956-89297975 | None:intergenic | 40.0% | |
| TTATATTTCATTGGGCCCAG+TGG | + | chr3_1:89297958-89297977 | Msa0385670:intron | 40.0% | |
| AACAAGTGTCTAACTAGAGC+TGG | + | chr3_1:89298163-89298182 | Msa0385670:intron | 40.0% | |
| ACAAGTGTCTAACTAGAGCT+GGG | + | chr3_1:89298164-89298183 | Msa0385670:intron | 40.0% | |
| ! | GAATTGTTGTGCGGATGTTT+TGG | - | chr3_1:89298214-89298233 | None:intergenic | 40.0% |
| TAAGGAGAGACCAAAAGTGA+AGG | + | chr3_1:89298550-89298569 | Msa0385670:intron | 40.0% | |
| TGGTGATCTTTCTTCAATGC+TGG | - | chr3_1:89298785-89298804 | None:intergenic | 40.0% | |
| AGAAAGATCACCAACTCCAT+TGG | + | chr3_1:89298792-89298811 | Msa0385670:intron | 40.0% | |
| !! | CTTGTGATGATGCCCATTTT+GGG | + | chr3_1:89298953-89298972 | Msa0385670:CDS | 40.0% |
| TCAGAGAGATCACCCAAAAT+GGG | - | chr3_1:89298968-89298987 | None:intergenic | 40.0% | |
| ATCAGAGAGATCACCCAAAA+TGG | - | chr3_1:89298969-89298988 | None:intergenic | 40.0% | |
| GGTGATCTCTCTGATAAGTA+TGG | + | chr3_1:89298974-89298993 | Msa0385670:CDS | 40.0% | |
| ATCTCTCTGATAAGTATGGG+AGG | + | chr3_1:89298978-89298997 | Msa0385670:CDS | 40.0% | |
| GGATAATCATGAGGGTCATA+GGG | - | chr3_1:89299021-89299040 | None:intergenic | 40.0% | |
| !! | AGTAGAAAGAAGTACCCAAG+GGG | - | chr3_1:89299042-89299061 | None:intergenic | 40.0% |
| ! | TCTCTAGTGGAGGTATACAA+TGG | + | chr3_1:89299614-89299633 | Msa0385670:intron | 40.0% |
| AATGGCATCGCACACATTAA+TGG | + | chr3_1:89300090-89300109 | Msa0385670:intron | 40.0% | |
| ! | AGTGCATTTGGAGTTCTTTC+AGG | + | chr3_1:89300464-89300483 | Msa0385670:CDS | 40.0% |
| ! | GTGCATTTGGAGTTCTTTCA+GGG | + | chr3_1:89300465-89300484 | Msa0385670:CDS | 40.0% |
| ! | TTTGGAGTTCTTTCAGGGAT+AGG | + | chr3_1:89300470-89300489 | Msa0385670:CDS | 40.0% |
| ! | TTTGGTGGCAAGTAAACTAG+AGG | - | chr3_1:89300589-89300608 | None:intergenic | 40.0% |
| GGCTTTCCTTGTGAAATGAT+TGG | - | chr3_1:89300736-89300755 | None:intergenic | 40.0% | |
| GAGCTCAATGCTTTCAAAAG+TGG | - | chr3_1:89300799-89300818 | None:intergenic | 40.0% | |
| ACACCTACTATTGAGAAAGG+AGG | - | chr3_1:89300836-89300855 | None:intergenic | 40.0% | |
| GTCACACCTACTATTGAGAA+AGG | - | chr3_1:89300839-89300858 | None:intergenic | 40.0% | |
| GTTAACATGCATGATAGTCC+AGG | - | chr3_1:89301016-89301035 | None:intergenic | 40.0% | |
| ! | GCCGACTTAATGATCATTTC+TGG | + | chr3_1:89301556-89301575 | Msa0385670:CDS | 40.0% |
| !!! | GCCTATTTTTGCTCCTACTT+TGG | + | chr3_1:89301746-89301765 | Msa0385670:CDS | 40.0% |
| CCCAAAGTAGGAGCAAAAAT+AGG | - | chr3_1:89301750-89301769 | None:intergenic | 40.0% | |
| TTAACATGATACCTGCTCAC+GGG | - | chr3_1:89302310-89302329 | None:intergenic | 40.0% | |
| GCCCCTAAGAACACAATAAA+AGG | + | chr3_1:89302415-89302434 | Msa0385670:intron | 40.0% | |
| GGAACACAGTCAACTTCTAA+TGG | + | chr3_1:89302449-89302468 | Msa0385670:intron | 40.0% | |
| CACTTATCTTCTTTCAGGGA+AGG | + | chr3_1:89302563-89302582 | Msa0385670:intron | 40.0% | |
| TGCACATATTGTATCTCCCT+TGG | + | chr3_1:89302618-89302637 | Msa0385670:CDS | 40.0% | |
| GTTAATGGAGAGAAAGCCAA+GGG | - | chr3_1:89302637-89302656 | None:intergenic | 40.0% | |
| ! | CTTGGCTTTCTCTCCATTAA+CGG | + | chr3_1:89302636-89302655 | Msa0385670:CDS | 40.0% |
| ! | TTGGCTTTCTCTCCATTAAC+GGG | + | chr3_1:89302637-89302656 | Msa0385670:CDS | 40.0% |
| TCAGAGTATGATGCTTAGAG+TGG | + | chr3_1:89302915-89302934 | Msa0385670:CDS | 40.0% | |
| GATACCCTATGTGTGTGTGT+GGG | - | chr3_1:89292339-89292358 | None:intergenic | 45.0% | |
| GAAAGACGGTCATGAAGAGA+TGG | - | chr3_1:89292555-89292574 | None:intergenic | 45.0% | |
| AGTGAGCATTCATCTTGTCC+GGG | - | chr3_1:89292643-89292662 | None:intergenic | 45.0% | |
| TCACTTGCCATCTATCTCAC+TGG | + | chr3_1:89292658-89292677 | Msa0385670:CDS | 45.0% | |
| AAAGAGGCGAACTTTGCAGT+TGG | - | chr3_1:89293918-89293937 | None:intergenic | 45.0% | |
| AGTTCGCCTCTTTCAACTAC+AGG | + | chr3_1:89293925-89293944 | Msa0385670:intron | 45.0% | |
| CAATTTAGTGGGGTGCAGAA+AGG | + | chr3_1:89294050-89294069 | Msa0385670:intron | 45.0% | |
| TGGATTGCTTGTCTCATAGC+TGG | + | chr3_1:89294081-89294100 | Msa0385670:intron | 45.0% | |
| GGATTGCTTGTCTCATAGCT+GGG | + | chr3_1:89294082-89294101 | Msa0385670:intron | 45.0% | |
| CCTTTCACTAATGGCAGTTG+GGG | + | chr3_1:89294221-89294240 | Msa0385670:intron | 45.0% | |
| ! | GGGATTCAGTGACTCGTTTT+AGG | + | chr3_1:89294241-89294260 | Msa0385670:intron | 45.0% |
| GTAAGCTTAGCTCAGTTGGT+TGG | + | chr3_1:89294493-89294512 | Msa0385670:intron | 45.0% | |
| GATCTTAAACATGGCAAGGG+AGG | + | chr3_1:89294784-89294803 | Msa0385670:intron | 45.0% | |
| ! | GCTTGCTAGTGACTGTGATA+TGG | + | chr3_1:89295455-89295474 | Msa0385670:intron | 45.0% |
| AAAAACTACCACATGAGCGG+TGG | + | chr3_1:89295909-89295928 | Msa0385670:intron | 45.0% | |
| GTGGTAACAGTGTACTAACG+TGG | + | chr3_1:89295928-89295947 | Msa0385670:intron | 45.0% | |
| TAACAGTGTACTAACGTGGG+TGG | + | chr3_1:89295932-89295951 | Msa0385670:intron | 45.0% | |
| TTACAATGGGAGAGGAGAGT+GGG | - | chr3_1:89296325-89296344 | None:intergenic | 45.0% | |
| ATTACAATGGGAGAGGAGAG+TGG | - | chr3_1:89296326-89296345 | None:intergenic | 45.0% | |
| CGCTTGTATTACAATGGGAG+AGG | - | chr3_1:89296333-89296352 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | + | chr3_1:89296624-89296643 | Msa0385670:intron | 45.0% | |
| AAGAAAAAAAGGGGGGACCT+AGG | + | chr3_1:89297035-89297054 | Msa0385670:intron | 45.0% | |
| ATTGGTCATTTGGTAAGGGG+CGG | - | chr3_1:89297098-89297117 | None:intergenic | 45.0% | |
| ! | TATTTTGTTGGCCCACTGCT+TGG | + | chr3_1:89297348-89297367 | Msa0385670:intron | 45.0% |
| !!! | GGGAGTGAGCGTTTTTTGTT+GGG | - | chr3_1:89297653-89297672 | None:intergenic | 45.0% |
| !!! | TGGGAGTGAGCGTTTTTTGT+TGG | - | chr3_1:89297654-89297673 | None:intergenic | 45.0% |
| CGTGACTTAACTCACATGAG+GGG | - | chr3_1:89297695-89297714 | None:intergenic | 45.0% | |
| CAGCGTAAGTTAACTCATCC+AGG | - | chr3_1:89297765-89297784 | None:intergenic | 45.0% | |
| CTGGATGAGTTAACTTACGC+TGG | + | chr3_1:89297763-89297782 | Msa0385670:intron | 45.0% | |
| GGATGAGTTAACTTACGCTG+GGG | + | chr3_1:89297765-89297784 | Msa0385670:intron | 45.0% | |
| ! | TGTATGGGAGGGAGCAATTT+TGG | + | chr3_1:89297869-89297888 | Msa0385670:intron | 45.0% |
| GAGAAATGGACCAATGGAGT+TGG | - | chr3_1:89298805-89298824 | None:intergenic | 45.0% | |
| ATCGAGGAGAAATGGACCAA+TGG | - | chr3_1:89298811-89298830 | None:intergenic | 45.0% | |
| ATGCCTCAATCGAGGAGAAA+TGG | - | chr3_1:89298819-89298838 | None:intergenic | 45.0% | |
| ATTTCTCCTCGATTGAGGCA+TGG | + | chr3_1:89298818-89298837 | Msa0385670:intron | 45.0% | |
| !! | GCTTGTGATGATGCCCATTT+TGG | + | chr3_1:89298952-89298971 | Msa0385670:CDS | 45.0% |
| CTCTGATAAGTATGGGAGGA+AGG | + | chr3_1:89298982-89299001 | Msa0385670:CDS | 45.0% | |
| GGGATAATCATGAGGGTCAT+AGG | - | chr3_1:89299022-89299041 | None:intergenic | 45.0% | |
| ACCCTCATGATTATCCCCTT+GGG | + | chr3_1:89299025-89299044 | Msa0385670:CDS | 45.0% | |
| ACCCAAGGGGATAATCATGA+GGG | - | chr3_1:89299029-89299048 | None:intergenic | 45.0% | |
| TACCCAAGGGGATAATCATG+AGG | - | chr3_1:89299030-89299049 | None:intergenic | 45.0% | |
| ATGTGAACACCTTACGCTAG+TGG | + | chr3_1:89299898-89299917 | Msa0385670:intron | 45.0% | |
| TGGATGATTCGCAGGCATAT+TGG | + | chr3_1:89300160-89300179 | Msa0385670:intron | 45.0% | |
| TAACAACGTAAGCTAGAGCG+AGG | - | chr3_1:89300271-89300290 | None:intergenic | 45.0% | |
| TAGGCAGATAACGTTCCAGA+AGG | + | chr3_1:89300431-89300450 | Msa0385670:intron | 45.0% | |
| ! | ATCCGCTGCTCAAACTTTTC+AGG | + | chr3_1:89300535-89300554 | Msa0385670:CDS | 45.0% |
| CACCTGAAAAGTTTGAGCAG+CGG | - | chr3_1:89300540-89300559 | None:intergenic | 45.0% | |
| ! | TCAACTTTTGTTGCGGTGCT+CGG | + | chr3_1:89300649-89300668 | Msa0385670:CDS | 45.0% |
| CAAGGTAGATGGCACTGTAA+TGG | - | chr3_1:89301082-89301101 | None:intergenic | 45.0% | |
| TTCAGCAACCTTGCAGATGT+TGG | + | chr3_1:89301375-89301394 | Msa0385670:CDS | 45.0% | |
| TGGCCTTCATGGTTCAATGA+TGG | + | chr3_1:89301395-89301414 | Msa0385670:CDS | 45.0% | |
| CAGCAAAAGACATACCCAAG+AGG | - | chr3_1:89301933-89301952 | None:intergenic | 45.0% | |
| GAGAACATTGCAGCAGCATA+AGG | - | chr3_1:89302119-89302138 | None:intergenic | 45.0% | |
| TAACATGATACCTGCTCACG+GGG | - | chr3_1:89302309-89302328 | None:intergenic | 45.0% | |
| CGTTAATGGAGAGAAAGCCA+AGG | - | chr3_1:89302638-89302657 | None:intergenic | 45.0% | |
| ACTTTCCACTCACCCGTTAA+TGG | - | chr3_1:89302652-89302671 | None:intergenic | 45.0% | |
| !! | ATATTATAACATAATTTAAT+TGG | - | chr3_1:89293475-89293494 | None:intergenic | 5.0% |
| !! | TAAATAAAATTAAATTAATG+AGG | + | chr3_1:89296026-89296045 | Msa0385670:intron | 5.0% |
| !! | AAAATTATTATAAAGTTAAT+AGG | + | chr3_1:89296988-89297007 | Msa0385670:intron | 5.0% |
| !! | AAAAAAAAAAAAAGAAAAAA+AGG | + | chr3_1:89297024-89297043 | Msa0385670:intron | 5.0% |
| !! | AAAAAAAAAAAAGAAAAAAA+GGG | + | chr3_1:89297025-89297044 | Msa0385670:intron | 5.0% |
| !! | ATATTAATTTATAATATTGT+GGG | - | chr3_1:89299518-89299537 | None:intergenic | 5.0% |
| !! | AATATTAATTTATAATATTG+TGG | - | chr3_1:89299519-89299538 | None:intergenic | 5.0% |
| !! | AATATTATAAATTAATATTG+TGG | + | chr3_1:89299520-89299539 | Msa0385670:intron | 5.0% |
| !!! | TTATTAAATTTTTAAAAATG+TGG | + | chr3_1:89300977-89300996 | Msa0385670:intron | 5.0% |
| !!! | TTTTAATAGAAATAAAAATT+TGG | - | chr3_1:89301038-89301057 | None:intergenic | 5.0% |
| AAGGTCCCACACACACACAT+AGG | + | chr3_1:89292331-89292350 | Msa0385670:five_prime_UTR | 50.0% | |
| AGGTCCCACACACACACATA+GGG | + | chr3_1:89292332-89292351 | Msa0385670:five_prime_UTR | 50.0% | |
| CGATACCCTATGTGTGTGTG+TGG | - | chr3_1:89292340-89292359 | None:intergenic | 50.0% | |
| ACAATGGCTGCTCTTTGTCC+CGG | + | chr3_1:89292622-89292641 | Msa0385670:CDS | 50.0% | |
| !! | TTGGTTTGCAGTGCGTGTGT+GGG | - | chr3_1:89293171-89293190 | None:intergenic | 50.0% |
| !! | ATTGGTTTGCAGTGCGTGTG+TGG | - | chr3_1:89293172-89293191 | None:intergenic | 50.0% |
| CCCCAACTGCCATTAGTGAA+AGG | - | chr3_1:89294224-89294243 | None:intergenic | 50.0% | |
| CCAACTGAGCTAAGCTTACG+AGG | - | chr3_1:89294492-89294511 | None:intergenic | 50.0% | |
| CCTCGTAAGCTTAGCTCAGT+TGG | + | chr3_1:89294489-89294508 | Msa0385670:intron | 50.0% | |
| TACAATGGGAGAGGAGAGTG+GGG | - | chr3_1:89296324-89296343 | None:intergenic | 50.0% | |
| TTCTTGTGGTACCATAGGGG+CGG | + | chr3_1:89296381-89296400 | Msa0385670:intron | 50.0% | |
| AGCATGATACCCGTGCATAC+GGG | + | chr3_1:89296625-89296644 | Msa0385670:intron | 50.0% | |
| CCACATGACTTAAGTCACGC+AGG | - | chr3_1:89297832-89297851 | None:intergenic | 50.0% | |
| CCTGCGTGACTTAAGTCATG+TGG | + | chr3_1:89297829-89297848 | Msa0385670:intron | 50.0% | |
| ! | TGGGAGGGAGCAATTTTGGA+TGG | + | chr3_1:89297873-89297892 | Msa0385670:intron | 50.0% |
| ! | GGGAGGGAGCAATTTTGGAT+GGG | + | chr3_1:89297874-89297893 | Msa0385670:intron | 50.0% |
| GAGGAATAAGTGTGGGGGTA+TGG | - | chr3_1:89298017-89298036 | None:intergenic | 50.0% | |
| GGAGAGACCAAAAGTGAAGG+TGG | + | chr3_1:89298553-89298572 | Msa0385670:intron | 50.0% | |
| GGTCCATTTCTCCTCGATTG+AGG | + | chr3_1:89298813-89298832 | Msa0385670:intron | 50.0% | |
| TCCTCGATTGAGGCATGGAA+TGG | + | chr3_1:89298823-89298842 | Msa0385670:intron | 50.0% | |
| TCCATTCCATGCCTCAATCG+AGG | - | chr3_1:89298827-89298846 | None:intergenic | 50.0% | |
| ! | GGTCATAGGGAGCGTAAGAA+TGG | - | chr3_1:89299008-89299027 | None:intergenic | 50.0% |
| GACCCTCATGATTATCCCCT+TGG | + | chr3_1:89299024-89299043 | Msa0385670:CDS | 50.0% | |
| ACTCGTCAACCACTAGCGTA+AGG | - | chr3_1:89299910-89299929 | None:intergenic | 50.0% | |
| ACTGCTTCTGGATGATTCGC+AGG | + | chr3_1:89300152-89300171 | Msa0385670:intron | 50.0% | |
| GGTCGAAGAAGCAGTGCATT+TGG | + | chr3_1:89300452-89300471 | Msa0385670:CDS | 50.0% | |
| TGTTGCACACACAAACGCTG+AGG | - | chr3_1:89300498-89300517 | None:intergenic | 50.0% | |
| CATGAAGGCCAACATCTGCA+AGG | - | chr3_1:89301386-89301405 | None:intergenic | 50.0% | |
| !! | CTTGCAGATGTTGGCCTTCA+TGG | + | chr3_1:89301384-89301403 | Msa0385670:CDS | 50.0% |
| TATTGCAGGGACTGTGTCAC+AGG | + | chr3_1:89301579-89301598 | Msa0385670:CDS | 50.0% | |
| ! | TTTTGCTCCTACTTTGGGCG+AGG | + | chr3_1:89301752-89301771 | Msa0385670:CDS | 50.0% |
| GAGGCAAGGCTTCTTTCGAT+TGG | + | chr3_1:89301771-89301790 | Msa0385670:CDS | 50.0% | |
| ACAGCATAGCATGGTCCTCT+TGG | + | chr3_1:89301915-89301934 | Msa0385670:CDS | 50.0% | |
| CAGCATAGCATGGTCCTCTT+GGG | + | chr3_1:89301916-89301935 | Msa0385670:CDS | 50.0% | |
| TTCTTTCAGGGAAGGGCTCA+AGG | + | chr3_1:89302571-89302590 | Msa0385670:intron | 50.0% | |
| ! | TCTCTCCATTAACGGGTGAG+TGG | + | chr3_1:89302644-89302663 | Msa0385670:intron | 50.0% |
| GGTGCAGAAAGGACGAGTCT+TGG | + | chr3_1:89294061-89294080 | Msa0385670:intron | 55.0% | |
| CACTGTTACCACCGCTCATG+TGG | - | chr3_1:89295920-89295939 | None:intergenic | 55.0% | |
| AAAAAAGGGGGGACCTAGGC+TGG | + | chr3_1:89297039-89297058 | Msa0385670:intron | 55.0% | |
| TGCCACACTGTGCCTAGAAG+AGG | + | chr3_1:89297071-89297090 | Msa0385670:intron | 55.0% | |
| GACCTCTTCTAGGCACAGTG+TGG | - | chr3_1:89297076-89297095 | None:intergenic | 55.0% | |
| CACTGGAACGTCCAAGCAGT+GGG | - | chr3_1:89297362-89297381 | None:intergenic | 55.0% | |
| ACACTGGAACGTCCAAGCAG+TGG | - | chr3_1:89297363-89297382 | None:intergenic | 55.0% | |
| GGGTGGAGGAATAAGTGTGG+GGG | - | chr3_1:89298022-89298041 | None:intergenic | 55.0% | |
| GGGGTGGAGGAATAAGTGTG+GGG | - | chr3_1:89298023-89298042 | None:intergenic | 55.0% | |
| GGGGGTGGAGGAATAAGTGT+GGG | - | chr3_1:89298024-89298043 | None:intergenic | 55.0% | |
| TGGGGGTGGAGGAATAAGTG+TGG | - | chr3_1:89298025-89298044 | None:intergenic | 55.0% | |
| ACGTAAGCTAGAGCGAGGCA+AGG | - | chr3_1:89300266-89300285 | None:intergenic | 55.0% | |
| GCACTGCTTCTTCGACCTTC+TGG | - | chr3_1:89300449-89300468 | None:intergenic | 55.0% | |
| AGGGCTCAAGGTTGCATCTC+AGG | + | chr3_1:89302583-89302602 | Msa0385670:CDS | 55.0% | |
| TGGTACCATAGGGGCGGATC+TGG | + | chr3_1:89296387-89296406 | Msa0385670:intron | 60.0% | |
| TGAGTCCAGATCCGCCCCTA+TGG | - | chr3_1:89296395-89296414 | None:intergenic | 60.0% | |
| TGATACCCGTGCATACGGGC+AGG | + | chr3_1:89296629-89296648 | Msa0385670:intron | 60.0% | |
| GTAAGGGGCGGACCTCTTCT+AGG | - | chr3_1:89297086-89297105 | None:intergenic | 60.0% | |
| CATCGGCGACTGAATCCCGA+AGG | - | chr3_1:89300696-89300715 | None:intergenic | 60.0% | |
| CTCCTACTTTGGGCGAGGCA+AGG | + | chr3_1:89301757-89301776 | Msa0385670:CDS | 60.0% | |
| AGCCTTGCCTCGCCCAAAGT+AGG | - | chr3_1:89301762-89301781 | None:intergenic | 60.0% | |
| GCTCACCTGCCCGTATGCAC+GGG | - | chr3_1:89296637-89296656 | None:intergenic | 65.0% | |
| CGCTCACCTGCCCGTATGCA+CGG | - | chr3_1:89296638-89296657 | None:intergenic | 65.0% | |
| GGCAAGTGCCACACCAGCCT+AGG | - | chr3_1:89297055-89297074 | None:intergenic | 65.0% | |
| AGGGGGGACCTAGGCTGGTG+TGG | + | chr3_1:89297044-89297063 | Msa0385670:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 89292300 | 89303348 | 89292300 | ID=Msa0385670;Name=Msa0385670 |
| chr3_1 | mRNA | 89292300 | 89303348 | 89292300 | ID=Msa0385670-mRNA-1;Parent=Msa0385670;Name=Msa0385670-mRNA-1;_AED=0.14;_eAED=0.14;_QI=208|1|1|1|1|1|14|391|439 |
| chr3_1 | exon | 89292300 | 89292693 | 89292300 | ID=Msa0385670-mRNA-1:exon:24303;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89298935 | 89299046 | 89298935 | ID=Msa0385670-mRNA-1:exon:24304;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89300174 | 89300286 | 89300174 | ID=Msa0385670-mRNA-1:exon:24305;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89300434 | 89300556 | 89300434 | ID=Msa0385670-mRNA-1:exon:24306;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89300646 | 89300851 | 89300646 | ID=Msa0385670-mRNA-1:exon:24307;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89301341 | 89301416 | 89301341 | ID=Msa0385670-mRNA-1:exon:24308;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89301514 | 89301600 | 89301514 | ID=Msa0385670-mRNA-1:exon:24309;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89301735 | 89301815 | 89301735 | ID=Msa0385670-mRNA-1:exon:24310;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89301905 | 89301937 | 89301905 | ID=Msa0385670-mRNA-1:exon:24311;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89302113 | 89302166 | 89302113 | ID=Msa0385670-mRNA-1:exon:24312;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89302276 | 89302317 | 89302276 | ID=Msa0385670-mRNA-1:exon:24313;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89302580 | 89302658 | 89302580 | ID=Msa0385670-mRNA-1:exon:24314;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89302743 | 89302813 | 89302743 | ID=Msa0385670-mRNA-1:exon:24315;Parent=Msa0385670-mRNA-1 |
| chr3_1 | exon | 89302901 | 89303348 | 89302901 | ID=Msa0385670-mRNA-1:exon:24316;Parent=Msa0385670-mRNA-1 |
| chr3_1 | five_prime_UTR | 89292300 | 89292507 | 89292300 | ID=Msa0385670-mRNA-1:five_prime_utr;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89292508 | 89292693 | 89292508 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89298935 | 89299046 | 89298935 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89300174 | 89300286 | 89300174 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89300434 | 89300556 | 89300434 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89300646 | 89300851 | 89300646 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89301341 | 89301416 | 89301341 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89301514 | 89301600 | 89301514 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89301735 | 89301815 | 89301735 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89301905 | 89301937 | 89301905 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89302113 | 89302166 | 89302113 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89302276 | 89302317 | 89302276 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89302580 | 89302658 | 89302580 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89302743 | 89302813 | 89302743 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | CDS | 89302901 | 89302957 | 89302901 | ID=Msa0385670-mRNA-1:cds;Parent=Msa0385670-mRNA-1 |
| chr3_1 | three_prime_UTR | 89302958 | 89303348 | 89302958 | ID=Msa0385670-mRNA-1:three_prime_utr;Parent=Msa0385670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
