AlfalfaGEDB | Msa0628640

M. sativa cultivar zhongmu-4 / Msa0628640

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0628640	AES86643.1	96.447	197	7	0	1	197	1	197	5.33e-137	391

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0628640	G7JI77	96.447	197	7	0	1	197	1	197	2.55e-137	391

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0031050	Msa0628640	0.806779	6.969417e-50	-8.615850e-47
Msa0031090	Msa0628640	0.807002	6.252266e-50	-8.615850e-47
Msa0036430	Msa0628640	0.821731	3.455109e-53	-8.615850e-47
Msa0036960	Msa0628640	0.826343	2.857453e-54	-8.615850e-47
Msa0044100	Msa0628640	0.872556	2.905292e-67	-8.615850e-47
Msa0078430	Msa0628640	0.816247	6.102941e-52	-8.615850e-47
Msa0084500	Msa0628640	0.802311	5.959663e-49	-8.615850e-47
Msa0095540	Msa0628640	0.871248	7.896819e-67	-8.615850e-47
Msa0096000	Msa0628640	0.820790	5.693391e-53	-8.615850e-47
Msa0611380	Msa0628640	0.898984	3.104415e-77	-8.615850e-47
Msa0618180	Msa0628640	0.844040	9.668978e-59	-8.615850e-47
Msa0618220	Msa0628640	0.835791	1.365804e-56	-8.615850e-47
Msa0618290	Msa0628640	0.819227	1.297521e-52	-8.615850e-47
Msa0619990	Msa0628640	0.844420	7.646464e-59	-8.615850e-47
Msa0628640	Msa0631120	0.889605	2.086178e-73	-8.615850e-47
Msa0628640	Msa0666030	0.874769	5.213008e-68	-8.615850e-47
Msa0628640	Msa0669340	0.898294	6.110309e-77	-8.615850e-47
Msa0628640	Msa0684500	0.833086	6.527575e-56	-8.615850e-47
Msa0628640	Msa0701970	0.863114	3.135744e-64	-8.615850e-47
Msa0628640	Msa0706420	0.810545	1.093126e-50	-8.615850e-47
Msa0628640	Msa0709500	0.802933	4.433883e-49	-8.615850e-47
Msa0628640	Msa0716450	0.888015	8.581122e-73	-8.615850e-47
Msa0628640	Msa0717260	0.905959	2.471467e-80	-8.615850e-47
Msa0628640	Msa0734230	0.878615	2.433298e-69	-8.615850e-47
Msa0628640	Msa0734660	0.804571	2.026238e-49	-8.615850e-47
Msa0628640	Msa0741900	0.800971	1.121885e-48	-8.615850e-47
Msa0628640	Msa0754370	0.804695	1.908874e-49	-8.615850e-47
Msa0628640	Msa0758320	0.903047	5.190682e-79	-8.615850e-47
Msa0628640	Msa0773610	0.805985	1.024620e-49	-8.615850e-47
Msa0628640	Msa0775440	0.872762	2.478426e-67	-8.615850e-47
Msa0628640	Msa0790850	0.805945	1.044459e-49	-8.615850e-47
Msa0628640	Msa0795690	0.810302	1.233542e-50	-8.615850e-47
Msa0628640	Msa0799030	0.888954	3.733660e-73	-8.615850e-47
Msa0628640	Msa0799700	0.886832	2.425632e-72	-8.615850e-47
Msa0628640	Msa0810020	0.837407	5.293755e-57	-8.615850e-47
Msa0628640	Msa0812820	0.899445	1.968591e-77	-8.615850e-47
Msa0628640	Msa0813670	0.803337	3.657535e-49	-8.615850e-47
Msa0628640	Msa0822990	0.824433	8.091243e-54	-8.615850e-47
Msa0628640	Msa0837440	0.877853	4.501683e-69	-8.615850e-47
Msa0628640	Msa0837980	0.899687	1.548911e-77	-8.615850e-47
Msa0628640	Msa0837990	0.800195	1.615082e-48	-8.615850e-47
Msa0628640	Msa0853320	0.895849	6.477915e-76	-8.615850e-47
Msa0628640	Msa0862100	0.812232	4.701185e-51	-8.615850e-47
Msa0628640	Msa0880710	0.829631	4.620009e-55	-8.615850e-47
Msa0628640	Msa0885060	0.810810	9.580231e-51	-8.615850e-47
Msa0628640	Msa0936270	0.807058	6.084382e-50	-8.615850e-47
Msa0628640	Msa0944770	0.811738	6.023665e-51	-8.615850e-47
Msa0628640	Msa0951710	0.823960	1.045319e-53	-8.615850e-47
Msa0628640	Msa0966340	0.802794	4.737727e-49	-8.615850e-47
Msa0628640	Msa0966420	0.803384	3.576397e-49	-8.615850e-47
Msa0628640	Msa0966440	0.800867	1.178028e-48	-8.615850e-47
Msa0628640	Msa0981010	0.845443	4.048956e-59	-8.615850e-47
Msa0628640	Msa0988480	0.809923	1.488302e-50	-8.615850e-47
Msa0628640	Msa1001770	0.812391	4.341719e-51	-8.615850e-47
Msa0628640	Msa1002620	0.862133	6.286791e-64	-8.615850e-47
Msa0628640	Msa1010110	0.840733	7.279419e-58	-8.615850e-47
Msa0628640	Msa1033560	0.861025	1.370629e-63	-8.615850e-47
Msa0628640	Msa1073350	0.825201	5.333266e-54	-8.615850e-47
Msa0628640	Msa1083150	0.800987	1.113566e-48	-8.615850e-47
Msa0628640	Msa1113850	0.862357	5.365790e-64	-8.615850e-47
Msa0628640	Msa1125760	0.802965	4.367106e-49	-8.615850e-47
Msa0628640	Msa1160400	0.877183	7.706192e-69	-8.615850e-47
Msa0628640	Msa1171360	0.802415	5.670572e-49	-8.615850e-47
Msa0628640	Msa1172590	0.807727	4.388968e-50	-8.615850e-47
Msa0628640	Msa1179460	0.806139	9.511108e-50	-8.615850e-47
Msa0628640	Msa1190120	0.857327	1.759907e-62	-8.615850e-47
Msa0628640	Msa1197590	0.823027	1.727532e-53	-8.615850e-47
Msa0628640	Msa1201890	0.809398	1.930008e-50	-8.615850e-47
Msa0628640	Msa1203000	0.872613	2.780825e-67	-8.615850e-47
Msa0628640	Msa1211550	0.860958	1.436231e-63	-8.615850e-47
Msa0628640	Msa1217860	0.800481	1.412559e-48	-8.615850e-47
Msa0628640	Msa1217940	0.873210	1.754345e-67	-8.615850e-47
Msa0628640	Msa1218480	0.830381	3.032166e-55	-8.615850e-47
Msa0628640	Msa1219260	0.867140	1.704369e-65	-8.615850e-47
Msa0628640	Msa1227950	0.843456	1.386088e-58	-8.615850e-47
Msa0628640	Msa1227970	0.834361	3.133538e-56	-8.615850e-47
Msa0628640	Msa1254700	0.818825	1.601343e-52	-8.615850e-47
Msa0628640	Msa1255280	0.858782	6.505050e-63	-8.615850e-47
Msa0628640	Msa1258050	0.879036	1.728742e-69	-8.615850e-47
Msa0628640	Msa1266960	0.868950	4.459837e-66	-8.615850e-47
Msa0628640	Msa1291870	0.820875	5.443032e-53	-8.615850e-47
Msa0628640	Msa1308130	0.817412	3.341911e-52	-8.615850e-47
Msa0628640	Msa1329920	0.808045	3.755146e-50	-8.615850e-47
Msa0628640	Msa1339940	0.865367	6.217910e-65	-8.615850e-47
Msa0628640	Msa1342430	0.841562	4.408075e-58	-8.615850e-47
Msa0628640	Msa1343820	0.809691	1.669874e-50	-8.615850e-47
Msa0628640	Msa1369700	0.881609	2.081697e-70	-8.615850e-47
Msa0628640	Msa1379990	0.807608	4.651525e-50	-8.615850e-47
Msa0628640	Msa1381140	0.809560	1.781660e-50	-8.615850e-47
Msa0628640	Msa1395870	0.849068	4.098762e-60	-8.615850e-47
Msa0628640	Msa1397250	0.808846	2.534417e-50	-8.615850e-47
Msa0628640	Msa1399560	0.867557	1.253613e-65	-8.615850e-47
Msa0628640	Msa1401150	0.824539	7.640922e-54	-8.615850e-47
Msa0628640	Msa1423450	0.808829	2.555537e-50	-8.615850e-47
Msa0628640	Msa1437190	0.879439	1.244762e-69	-8.615850e-47
Msa0628640	Msa1439960	0.800525	1.383341e-48	-8.615850e-47
Msa0628640	Msa1440340	0.834330	3.189731e-56	-8.615850e-47
Msa0628640	Msa1443840	0.866941	1.972215e-65	-8.615850e-47
Msa0628640	Msa1449730	0.841472	4.655821e-58	-8.615850e-47
Msa0628640	Msa1452060	0.868234	7.596957e-66	-8.615850e-47
Msa0628640	Msa1460380	0.889390	2.527819e-73	-8.615850e-47
Msa0628640	Msa1460890	0.804088	2.554706e-49	-8.615850e-47
Msa0130570	Msa0628640	0.801741	7.802639e-49	-8.615850e-47
Msa0141100	Msa0628640	0.883369	4.756931e-71	-8.615850e-47
Msa0148340	Msa0628640	0.802603	5.187520e-49	-8.615850e-47
Msa0176470	Msa0628640	0.802581	5.242704e-49	-8.615850e-47
Msa0183750	Msa0628640	0.890063	1.381538e-73	-8.615850e-47
Msa0185380	Msa0628640	0.802887	4.532917e-49	-8.615850e-47
Msa0185480	Msa0628640	0.806965	6.366485e-50	-8.615850e-47
Msa0191040	Msa0628640	0.868983	4.350186e-66	-8.615850e-47
Msa0208520	Msa0628640	0.804851	1.771219e-49	-8.615850e-47
Msa0220300	Msa0628640	0.843459	1.383335e-58	-8.615850e-47
Msa0233340	Msa0628640	0.869107	3.966291e-66	-8.615850e-47
Msa0236440	Msa0628640	0.814489	1.500996e-51	-8.615850e-47
Msa0374850	Msa0628640	0.879405	1.280412e-69	-8.615850e-47
Msa0375090	Msa0628640	0.887945	9.129853e-73	-8.615850e-47
Msa0385670	Msa0628640	0.825505	4.519216e-54	-8.615850e-47
Msa0423360	Msa0628640	-0.812190	4.802047e-51	-8.615850e-47
Msa0435670	Msa0628640	0.802496	5.457873e-49	-8.615850e-47
Msa0436460	Msa0628640	0.803357	3.623051e-49	-8.615850e-47
Msa0470340	Msa0628640	0.889339	2.647363e-73	-8.615850e-47
Msa0470860	Msa0628640	0.864705	1.003069e-64	-8.615850e-47
Msa0480950	Msa0628640	0.878600	2.463748e-69	-8.615850e-47
Msa0481110	Msa0628640	0.857164	1.966291e-62	-8.615850e-47
Msa0251240	Msa0628640	0.838193	3.325811e-57	-8.615850e-47
Msa0266450	Msa0628640	0.817450	3.277454e-52	-8.615850e-47
Msa0288190	Msa0628640	0.803738	3.020975e-49	-8.615850e-47
Msa0309350	Msa0628640	0.800367	1.490344e-48	-8.615850e-47
Msa0311690	Msa0628640	0.865691	4.914361e-65	-8.615850e-47
Msa0315250	Msa0628640	0.807652	4.552853e-50	-8.615850e-47
Msa0326540	Msa0628640	0.810226	1.280396e-50	-8.615850e-47
Msa0520510	Msa0628640	0.813485	2.499667e-51	-8.615850e-47
Msa0531430	Msa0628640	0.898877	3.447139e-77	-8.615850e-47
Msa0534570	Msa0628640	0.890743	7.472912e-74	-8.615850e-47
Msa0534590	Msa0628640	0.897810	9.797688e-77	-8.615850e-47
Msa0557680	Msa0628640	0.807743	4.354215e-50	-8.615850e-47
Msa0565600	Msa0628640	0.877844	4.535989e-69	-8.615850e-47
Msa0590800	Msa0628640	0.908728	1.244994e-81	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0628640	MtrunA17_Chr4g0004451	95.808	167	7	0	1	167	1	167	2.60e-118	332
Msa0628640	MtrunA17_Chr2g0331861	39.744	156	91	2	34	188	48	201	1.07e-37	129
Msa0628640	MtrunA17_Chr6g0485381	30.000	170	108	4	23	187	64	227	6.22e-19	82.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0628640	AT1G52330.1	37.870	169	102	2	20	187	45	211	1.61e-35	124
Msa0628640	AT4G13270.1	34.091	176	111	3	16	190	44	215	1.08e-28	107
Msa0628640	AT1G52330.2	36.242	149	94	1	15	162	40	188	1.43e-27	104

Find 66 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATAATACCTTGAAAATATT+AGG	0.209336	4_3:+9292176	None:intergenic
ATTTCAATTTCTGGGTTTAA+TGG	0.237479	4_3:+9292545	None:intergenic
TTCATTATACAAAAGATAAT+TGG	0.272762	4_3:-9290697	Msa0628640:three_prime_UTR
GGTTGGCACGTGAGGGGTTG+GGG	0.288499	4_3:-9292347	Msa0628640:CDS
GATGTTGTGTCTTCCTATTA+TGG	0.309006	4_3:-9292613	Msa0628640:CDS
AAAACTATCATGTGAGGTTT+TGG	0.312823	4_3:-9291076	Msa0628640:CDS
GGGTTGGCACGTGAGGGGTT+GGG	0.315800	4_3:-9292348	Msa0628640:CDS
AGGTCTTACAACAATCTATT+AGG	0.337777	4_3:-9290968	Msa0628640:three_prime_UTR
GTGGTATAACGAGGTAGTTT+TGG	0.338427	4_3:+9292636	None:intergenic
TTAGAAACACTATCCATAAT+AGG	0.345966	4_3:+9292600	None:intergenic
AATGACACATCAGCACTTAA+TGG	0.368827	4_3:+9292479	None:intergenic
TGGGGTTCAGAACATGTGTT+TGG	0.368897	4_3:-9292329	Msa0628640:CDS
TGCATCAAATGTGCCACATC+TGG	0.379209	4_3:+9292278	None:intergenic
GGGGTTGGCACGTGAGGGGT+TGG	0.386737	4_3:-9292349	Msa0628640:CDS
CACACTGCCGTTGGAGTTGT+GGG	0.405445	4_3:-9292227	Msa0628640:CDS
ATAATACCTTGAAAATATTA+GGG	0.407851	4_3:+9292177	None:intergenic
GTGTTTGGTGAACTTGAGTA+TGG	0.416180	4_3:-9292314	Msa0628640:CDS
GTTGGAGTTGTGGGAAATCT+TGG	0.428858	4_3:-9292218	Msa0628640:CDS
ATTAAACCCAGAAATTGAAA+TGG	0.437917	4_3:-9292543	Msa0628640:CDS
ACATCAACATTGTGTTGAAA+AGG	0.450143	4_3:-9291028	Msa0628640:CDS
GTTGCATTGCACAATATTTG+TGG	0.466918	4_3:+9290854	None:intergenic
GTTTCTAACATTGTGTATAA+CGG	0.469131	4_3:-9292585	Msa0628640:CDS
CAGCACTTAATGGTGGTAAC+GGG	0.484037	4_3:+9292489	None:intergenic
AAACGAGGGGTTGGCACGTG+AGG	0.485667	4_3:-9292355	Msa0628640:CDS
TCACACTGCCGTTGGAGTTG+TGG	0.488121	4_3:-9292228	Msa0628640:CDS
GGCACATTTGATGCAGGATC+TGG	0.501360	4_3:-9292270	Msa0628640:CDS
AAGTATCGTGGGCATAAACT+TGG	0.516870	4_3:-9292386	Msa0628640:CDS
AACGAGGGGTTGGCACGTGA+GGG	0.527288	4_3:-9292354	Msa0628640:CDS
CAACAAGGCCAGGTCTATAA+CGG	0.535511	4_3:+9290991	None:intergenic
TTAGATGAGATTTGAGTGTG+AGG	0.536553	4_3:+9292701	None:intergenic
AATATTGTGCAATGCAACCA+TGG	0.538833	4_3:-9290849	Msa0628640:three_prime_UTR
TTATAGACCTGGCCTTGTTG+AGG	0.553020	4_3:-9290988	Msa0628640:exon
AGATGTGGCACATTTGATGC+AGG	0.554904	4_3:-9292276	Msa0628640:CDS
TGGACTTCCTTCTCCAGATG+TGG	0.562139	4_3:-9292291	Msa0628640:CDS
ATGGGACGAAGCGCAAAAGA+TGG	0.562825	4_3:-9290830	Msa0628640:three_prime_UTR
TGTAAGACCTCAACAAGGCC+AGG	0.565531	4_3:+9290981	None:intergenic
TCAGCACTTAATGGTGGTAA+CGG	0.566066	4_3:+9292488	None:intergenic
AACACAATGTTGATGTACAA+TGG	0.566277	4_3:+9291035	None:intergenic
GTCATGTGGAAACGAGGGGT+TGG	0.567758	4_3:-9292364	Msa0628640:CDS
ACGAGGGGTTGGCACGTGAG+GGG	0.570453	4_3:-9292353	Msa0628640:CDS
GAAAATATTAGGGAAGTGAA+AGG	0.575571	4_3:+9292187	None:intergenic
TTGCGATATATTTGTATGTG+TGG	0.577110	4_3:+9290773	None:intergenic
AATGTTGATGTACAATGGTA+TGG	0.578412	4_3:+9291040	None:intergenic
TTTCTGGGTTTAATGGCCAT+AGG	0.582895	4_3:+9292552	None:intergenic
AACTTGGTCATGTGGAAACG+AGG	0.594284	4_3:-9292370	Msa0628640:CDS
AAATGTGCCACATCTGGAGA+AGG	0.599916	4_3:+9292284	None:intergenic
TTTGGTGAACTTGAGTATGG+TGG	0.601355	4_3:-9292311	Msa0628640:CDS
ATGTGGGCATCAAGTATCGT+GGG	0.601481	4_3:-9292397	Msa0628640:CDS
TGCAGGATCTGGCTAAGAAG+AGG	0.601918	4_3:-9292259	Msa0628640:CDS
GGAGCTAGCTGAAGTTGATG+TGG	0.609943	4_3:-9292414	Msa0628640:CDS
GCAGGATCTGGCTAAGAAGA+GGG	0.611571	4_3:-9292258	Msa0628640:CDS
TGGGCATAAACTTGGTCATG+TGG	0.622370	4_3:-9292378	Msa0628640:CDS
AACCGTTAAAATTCACAACA+AGG	0.623265	4_3:-9292450	Msa0628640:CDS
AAGATTTCCCACAACTCCAA+CGG	0.629032	4_3:+9292220	None:intergenic
ATATTGTGCAATGCAACCAT+GGG	0.629214	4_3:-9290848	Msa0628640:three_prime_UTR
ACTTGGTCATGTGGAAACGA+GGG	0.630428	4_3:-9292369	Msa0628640:CDS
GATGTGGGCATCAAGTATCG+TGG	0.631779	4_3:-9292398	Msa0628640:CDS
TTAAGAAACCGTTATAGACC+TGG	0.641032	4_3:-9290999	Msa0628640:exon
CACAACATCGTGGTATAACG+AGG	0.644266	4_3:+9292627	None:intergenic
ATAGGTAAAACTATCATGTG+AGG	0.648016	4_3:-9291082	Msa0628640:intron
GAGCTAGCTGAAGTTGATGT+GGG	0.670977	4_3:-9292413	Msa0628640:CDS
GACACATCAGCACTTAATGG+TGG	0.680325	4_3:+9292482	None:intergenic
CTTGGTCATGTGGAAACGAG+GGG	0.682725	4_3:-9292368	Msa0628640:CDS
TACATATTGATATATCGATG+AGG	0.688774	4_3:+9290803	None:intergenic
ATTGTTGTAAGACCTCAACA+AGG	0.745491	4_3:+9290976	None:intergenic
AATAGGAAGACACAACATCG+TGG	0.762664	4_3:+9292617	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CTTTTTTTTTTTTTTTTTGA+AGG	+	chr4_3:9291512-9291531	None:intergenic	10.0%
!!!	CTTTTTTTTTTTTTTTTTGA+AGG	+	chr4_3:9291512-9291531	None:intergenic	10.0%
!!	ATAATACCTTGAAAATATTA+GGG	+	chr4_3:9291218-9291237	None:intergenic	15.0%
!!	TATAATACCTTGAAAATATT+AGG	+	chr4_3:9291219-9291238	None:intergenic	15.0%
!!!	TCATTCTTTTATTATTAACA+TGG	-	chr4_3:9292215-9292234	Msa0628640:CDS	15.0%
!!	TTCATTATACAAAAGATAAT+TGG	-	chr4_3:9292695-9292714	Msa0628640:five_prime_UTR	15.0%
!!	ATAATACCTTGAAAATATTA+GGG	+	chr4_3:9291218-9291237	None:intergenic	15.0%
!!	TATAATACCTTGAAAATATT+AGG	+	chr4_3:9291219-9291238	None:intergenic	15.0%
!!!	TCATTCTTTTATTATTAACA+TGG	-	chr4_3:9292215-9292234	Msa0628640:CDS	15.0%
!!	TTCATTATACAAAAGATAAT+TGG	-	chr4_3:9292695-9292714	Msa0628640:five_prime_UTR	15.0%
!!!	AATTTTCCATTTCAATTTCT+GGG	+	chr4_3:9290858-9290877	None:intergenic	20.0%
!!!	AAATTTTCCATTTCAATTTC+TGG	+	chr4_3:9290859-9290878	None:intergenic	20.0%
!!!	TTTTAAATCAGTCTCTAAAT+CGG	+	chr4_3:9291567-9291586	None:intergenic	20.0%
!!!	TAGAGACTGATTTAAAAATT+CGG	-	chr4_3:9291570-9291589	Msa0628640:intron	20.0%
!!!	GTGATTTCTTTTTTTTTTTG+TGG	+	chr4_3:9292108-9292127	None:intergenic	20.0%
!!	TTTGTTTGTCATGTTATAAT+AGG	-	chr4_3:9292292-9292311	Msa0628640:CDS	20.0%
!!!	AATTTTCCATTTCAATTTCT+GGG	+	chr4_3:9290858-9290877	None:intergenic	20.0%
!!!	AAATTTTCCATTTCAATTTC+TGG	+	chr4_3:9290859-9290878	None:intergenic	20.0%
!!!	TTTTAAATCAGTCTCTAAAT+CGG	+	chr4_3:9291567-9291586	None:intergenic	20.0%
!!!	TAGAGACTGATTTAAAAATT+CGG	-	chr4_3:9291570-9291589	Msa0628640:intron	20.0%
!!!	GTGATTTCTTTTTTTTTTTG+TGG	+	chr4_3:9292108-9292127	None:intergenic	20.0%
!!	TTTGTTTGTCATGTTATAAT+AGG	-	chr4_3:9292292-9292311	Msa0628640:CDS	20.0%
!!!	TTTTGTTTTGAGTATGTCAT+TGG	+	chr4_3:9290733-9290752	None:intergenic	25.0%
!	TTAGAAACACTATCCATAAT+AGG	+	chr4_3:9290795-9290814	None:intergenic	25.0%
!	GTTTCTAACATTGTGTATAA+CGG	-	chr4_3:9290807-9290826	Msa0628640:three_prime_UTR	25.0%
!!	ATTTCAATTTCTGGGTTTAA+TGG	+	chr4_3:9290850-9290869	None:intergenic	25.0%
!	ATTAAACCCAGAAATTGAAA+TGG	-	chr4_3:9290849-9290868	Msa0628640:three_prime_UTR	25.0%
!!!	AACCTTGTTGTGAATTTTAA+CGG	+	chr4_3:9290947-9290966	None:intergenic	25.0%
!!	CTTTGGTCATTGAATTATTT+TGG	+	chr4_3:9291278-9291297	None:intergenic	25.0%
!	GTGATAATTAAGAGAAACTT+TGG	+	chr4_3:9291295-9291314	None:intergenic	25.0%
!	CTAGTTGCTAATAATGTTAA+CGG	+	chr4_3:9291449-9291468	None:intergenic	25.0%
!	TTAACATTATTAGCAACTAG+TGG	-	chr4_3:9291449-9291468	Msa0628640:intron	25.0%
!	AAAGTGAATTCTCATTTCAA+TGG	-	chr4_3:9291893-9291912	Msa0628640:intron	25.0%
!!	AATTCTCATTTCAATGGATT+TGG	-	chr4_3:9291899-9291918	Msa0628640:intron	25.0%
!	AAAAGAAAGAGACATTGAAT+AGG	-	chr4_3:9291972-9291991	Msa0628640:intron	25.0%
!	ACAATGGATAATATATGCAA+AGG	-	chr4_3:9292060-9292079	Msa0628640:intron	25.0%
!	AGAATGAAATTCGTCTATAA+AGG	+	chr4_3:9292202-9292221	None:intergenic	25.0%
!	AGTTATTTGGAAAGTGATAA+AGG	+	chr4_3:9292267-9292286	None:intergenic	25.0%
!	TTATCACTTTCCAAATAACT+TGG	-	chr4_3:9292267-9292286	Msa0628640:CDS	25.0%
!	CAAACAAAATCCAAGTTATT+TGG	+	chr4_3:9292280-9292299	None:intergenic	25.0%
!	CTTTCCAATGATAAAAATGA+AGG	-	chr4_3:9292508-9292527	Msa0628640:CDS	25.0%
!	TACATATTGATATATCGATG+AGG	+	chr4_3:9292592-9292611	None:intergenic	25.0%
!!!	TTTTGTTTTGAGTATGTCAT+TGG	+	chr4_3:9290733-9290752	None:intergenic	25.0%
!	TTAGAAACACTATCCATAAT+AGG	+	chr4_3:9290795-9290814	None:intergenic	25.0%
!	GTTTCTAACATTGTGTATAA+CGG	-	chr4_3:9290807-9290826	Msa0628640:three_prime_UTR	25.0%
!!	ATTTCAATTTCTGGGTTTAA+TGG	+	chr4_3:9290850-9290869	None:intergenic	25.0%
!	ATTAAACCCAGAAATTGAAA+TGG	-	chr4_3:9290849-9290868	Msa0628640:three_prime_UTR	25.0%
!!!	AACCTTGTTGTGAATTTTAA+CGG	+	chr4_3:9290947-9290966	None:intergenic	25.0%
!!	CTTTGGTCATTGAATTATTT+TGG	+	chr4_3:9291278-9291297	None:intergenic	25.0%
!	GTGATAATTAAGAGAAACTT+TGG	+	chr4_3:9291295-9291314	None:intergenic	25.0%
!	CTAGTTGCTAATAATGTTAA+CGG	+	chr4_3:9291449-9291468	None:intergenic	25.0%
!	TTAACATTATTAGCAACTAG+TGG	-	chr4_3:9291449-9291468	Msa0628640:intron	25.0%
!	AAAGTGAATTCTCATTTCAA+TGG	-	chr4_3:9291893-9291912	Msa0628640:intron	25.0%
!!	AATTCTCATTTCAATGGATT+TGG	-	chr4_3:9291899-9291918	Msa0628640:intron	25.0%
!	AAAAGAAAGAGACATTGAAT+AGG	-	chr4_3:9291972-9291991	Msa0628640:intron	25.0%
!	ACAATGGATAATATATGCAA+AGG	-	chr4_3:9292060-9292079	Msa0628640:intron	25.0%
!	AGAATGAAATTCGTCTATAA+AGG	+	chr4_3:9292202-9292221	None:intergenic	25.0%
!	AGTTATTTGGAAAGTGATAA+AGG	+	chr4_3:9292267-9292286	None:intergenic	25.0%
!	TTATCACTTTCCAAATAACT+TGG	-	chr4_3:9292267-9292286	Msa0628640:CDS	25.0%
!	CAAACAAAATCCAAGTTATT+TGG	+	chr4_3:9292280-9292299	None:intergenic	25.0%
!	CTTTCCAATGATAAAAATGA+AGG	-	chr4_3:9292508-9292527	Msa0628640:CDS	25.0%
!	TACATATTGATATATCGATG+AGG	+	chr4_3:9292592-9292611	None:intergenic	25.0%
	AACCGTTAAAATTCACAACA+AGG	-	chr4_3:9290942-9290961	Msa0628640:three_prime_UTR	30.0%
!!	TTCACAACAAGGTTTTGTAT+TGG	-	chr4_3:9290953-9290972	Msa0628640:three_prime_UTR	30.0%
	GAAAATATTAGGGAAGTGAA+AGG	+	chr4_3:9291208-9291227	None:intergenic	30.0%
!	TCACTTCCCTAATATTTTCA+AGG	-	chr4_3:9291209-9291228	Msa0628640:intron	30.0%
	TGTTTAACCGGTCTATAAAT+CGG	+	chr4_3:9291359-9291378	None:intergenic	30.0%
	AATTATTTCAGTCACCATAG+CGG	+	chr4_3:9291614-9291633	None:intergenic	30.0%
	CTATGGTGACTGAAATAATT+TGG	-	chr4_3:9291614-9291633	Msa0628640:intron	30.0%
	TAATCATCTCCCATTTCTTA+TGG	+	chr4_3:9291952-9291971	None:intergenic	30.0%
	GGATAATATATGCAAAGGTT+CGG	-	chr4_3:9292065-9292084	Msa0628640:intron	30.0%
	GATAATATATGCAAAGGTTC+GGG	-	chr4_3:9292066-9292085	Msa0628640:intron	30.0%
	ATAATATATGCAAAGGTTCG+GGG	-	chr4_3:9292067-9292086	Msa0628640:intron	30.0%
!!!	TTTTTTTTTTGTGGTGTCTG+AGG	+	chr4_3:9292099-9292118	None:intergenic	30.0%
	GTGATAAAGGAAAAAACTGA+AGG	+	chr4_3:9292254-9292273	None:intergenic	30.0%
	ATAGGTAAAACTATCATGTG+AGG	-	chr4_3:9292310-9292329	Msa0628640:CDS	30.0%
!	AAAACTATCATGTGAGGTTT+TGG	-	chr4_3:9292316-9292335	Msa0628640:CDS	30.0%
	AATGTTGATGTACAATGGTA+TGG	+	chr4_3:9292355-9292374	None:intergenic	30.0%
	AACACAATGTTGATGTACAA+TGG	+	chr4_3:9292360-9292379	None:intergenic	30.0%
	ACATCAACATTGTGTTGAAA+AGG	-	chr4_3:9292364-9292383	Msa0628640:CDS	30.0%
	AGGTCTTACAACAATCTATT+AGG	-	chr4_3:9292424-9292443	Msa0628640:CDS	30.0%
!!	CAGTCCTTCATTTTTATCAT+TGG	+	chr4_3:9292515-9292534	None:intergenic	30.0%
	TTGCGATATATTTGTATGTG+TGG	+	chr4_3:9292622-9292641	None:intergenic	30.0%
	AACCGTTAAAATTCACAACA+AGG	-	chr4_3:9290942-9290961	Msa0628640:three_prime_UTR	30.0%
!!	TTCACAACAAGGTTTTGTAT+TGG	-	chr4_3:9290953-9290972	Msa0628640:three_prime_UTR	30.0%
	GAAAATATTAGGGAAGTGAA+AGG	+	chr4_3:9291208-9291227	None:intergenic	30.0%
!	TCACTTCCCTAATATTTTCA+AGG	-	chr4_3:9291209-9291228	Msa0628640:intron	30.0%
	TGTTTAACCGGTCTATAAAT+CGG	+	chr4_3:9291359-9291378	None:intergenic	30.0%
	AATTATTTCAGTCACCATAG+CGG	+	chr4_3:9291614-9291633	None:intergenic	30.0%
	CTATGGTGACTGAAATAATT+TGG	-	chr4_3:9291614-9291633	Msa0628640:intron	30.0%
	TAATCATCTCCCATTTCTTA+TGG	+	chr4_3:9291952-9291971	None:intergenic	30.0%
	GGATAATATATGCAAAGGTT+CGG	-	chr4_3:9292065-9292084	Msa0628640:intron	30.0%
	GATAATATATGCAAAGGTTC+GGG	-	chr4_3:9292066-9292085	Msa0628640:intron	30.0%
	ATAATATATGCAAAGGTTCG+GGG	-	chr4_3:9292067-9292086	Msa0628640:intron	30.0%
!!!	TTTTTTTTTTGTGGTGTCTG+AGG	+	chr4_3:9292099-9292118	None:intergenic	30.0%
	GTGATAAAGGAAAAAACTGA+AGG	+	chr4_3:9292254-9292273	None:intergenic	30.0%
	ATAGGTAAAACTATCATGTG+AGG	-	chr4_3:9292310-9292329	Msa0628640:CDS	30.0%
!	AAAACTATCATGTGAGGTTT+TGG	-	chr4_3:9292316-9292335	Msa0628640:CDS	30.0%
	AATGTTGATGTACAATGGTA+TGG	+	chr4_3:9292355-9292374	None:intergenic	30.0%
	AACACAATGTTGATGTACAA+TGG	+	chr4_3:9292360-9292379	None:intergenic	30.0%
	ACATCAACATTGTGTTGAAA+AGG	-	chr4_3:9292364-9292383	Msa0628640:CDS	30.0%
	AGGTCTTACAACAATCTATT+AGG	-	chr4_3:9292424-9292443	Msa0628640:CDS	30.0%
!!	CAGTCCTTCATTTTTATCAT+TGG	+	chr4_3:9292515-9292534	None:intergenic	30.0%
	TTGCGATATATTTGTATGTG+TGG	+	chr4_3:9292622-9292641	None:intergenic	30.0%
	TTAGATGAGATTTGAGTGTG+AGG	+	chr4_3:9290694-9290713	None:intergenic	35.0%
!	TGGTATAACGAGGTAGTTTT+GGG	+	chr4_3:9290758-9290777	None:intergenic	35.0%
	GATGTTGTGTCTTCCTATTA+TGG	-	chr4_3:9290779-9290798	Msa0628640:three_prime_UTR	35.0%
	AATGACACATCAGCACTTAA+TGG	+	chr4_3:9290916-9290935	None:intergenic	35.0%
!!	CAACAAGGTTTTGTATTGGA+TGG	-	chr4_3:9290957-9290976	Msa0628640:three_prime_UTR	35.0%
!	ATATCGACCGATTTATAGAC+CGG	-	chr4_3:9291349-9291368	Msa0628640:intron	35.0%
	GGCAAATTTAGTGACCAATT+TGG	+	chr4_3:9291392-9291411	None:intergenic	35.0%
!	TTTTGCTGAGCCATAAGAAA+TGG	-	chr4_3:9291939-9291958	Msa0628640:intron	35.0%
	TTTGCTGAGCCATAAGAAAT+GGG	-	chr4_3:9291940-9291959	Msa0628640:intron	35.0%
	TTAAGAAACCGTTATAGACC+TGG	-	chr4_3:9292393-9292412	Msa0628640:CDS	35.0%
	ATTGTTGTAAGACCTCAACA+AGG	+	chr4_3:9292419-9292438	None:intergenic	35.0%
	GTTGCATTGCACAATATTTG+TGG	+	chr4_3:9292541-9292560	None:intergenic	35.0%
	AATATTGTGCAATGCAACCA+TGG	-	chr4_3:9292543-9292562	Msa0628640:CDS	35.0%
	ATATTGTGCAATGCAACCAT+GGG	-	chr4_3:9292544-9292563	Msa0628640:CDS	35.0%
	TTAGATGAGATTTGAGTGTG+AGG	+	chr4_3:9290694-9290713	None:intergenic	35.0%
!	TGGTATAACGAGGTAGTTTT+GGG	+	chr4_3:9290758-9290777	None:intergenic	35.0%
	GATGTTGTGTCTTCCTATTA+TGG	-	chr4_3:9290779-9290798	Msa0628640:three_prime_UTR	35.0%
	AATGACACATCAGCACTTAA+TGG	+	chr4_3:9290916-9290935	None:intergenic	35.0%
!!	CAACAAGGTTTTGTATTGGA+TGG	-	chr4_3:9290957-9290976	Msa0628640:three_prime_UTR	35.0%
!	ATATCGACCGATTTATAGAC+CGG	-	chr4_3:9291349-9291368	Msa0628640:intron	35.0%
	GGCAAATTTAGTGACCAATT+TGG	+	chr4_3:9291392-9291411	None:intergenic	35.0%
!	TTTTGCTGAGCCATAAGAAA+TGG	-	chr4_3:9291939-9291958	Msa0628640:intron	35.0%
	TTTGCTGAGCCATAAGAAAT+GGG	-	chr4_3:9291940-9291959	Msa0628640:intron	35.0%
	TTAAGAAACCGTTATAGACC+TGG	-	chr4_3:9292393-9292412	Msa0628640:CDS	35.0%
	ATTGTTGTAAGACCTCAACA+AGG	+	chr4_3:9292419-9292438	None:intergenic	35.0%
	GTTGCATTGCACAATATTTG+TGG	+	chr4_3:9292541-9292560	None:intergenic	35.0%
	AATATTGTGCAATGCAACCA+TGG	-	chr4_3:9292543-9292562	Msa0628640:CDS	35.0%
	ATATTGTGCAATGCAACCAT+GGG	-	chr4_3:9292544-9292563	Msa0628640:CDS	35.0%
!	GTGGTATAACGAGGTAGTTT+TGG	+	chr4_3:9290759-9290778	None:intergenic	40.0%
	AATAGGAAGACACAACATCG+TGG	+	chr4_3:9290778-9290797	None:intergenic	40.0%
!!!	TAACGGCGTTGTTTTTCCTA+TGG	-	chr4_3:9290824-9290843	Msa0628640:three_prime_UTR	40.0%
	TTTCTGGGTTTAATGGCCAT+AGG	+	chr4_3:9290843-9290862	None:intergenic	40.0%
	TCAGCACTTAATGGTGGTAA+CGG	+	chr4_3:9290907-9290926	None:intergenic	40.0%
!	AAGTATCGTGGGCATAAACT+TGG	-	chr4_3:9291006-9291025	Msa0628640:CDS	40.0%
!	GTGTTTGGTGAACTTGAGTA+TGG	-	chr4_3:9291078-9291097	Msa0628640:CDS	40.0%
	TTTGGTGAACTTGAGTATGG+TGG	-	chr4_3:9291081-9291100	Msa0628640:CDS	40.0%
	AAGATTTCCCACAACTCCAA+CGG	+	chr4_3:9291175-9291194	None:intergenic	40.0%
	GGTCTATAAATCGGTCGATA+TGG	+	chr4_3:9291350-9291369	None:intergenic	40.0%
	AACAAGCGAAAAGGCCAAAT+TGG	-	chr4_3:9291375-9291394	Msa0628640:intron	40.0%
	TGAATCAACATCAACCGCTA+TGG	-	chr4_3:9291597-9291616	Msa0628640:intron	40.0%
	ATTGCTGTACCATCGTTTGT+CGG	-	chr4_3:9291658-9291677	Msa0628640:intron	40.0%
!	TCATTTGTACCGACAAACGA+TGG	+	chr4_3:9291670-9291689	None:intergenic	40.0%
	CTCAGCAAAACTATTGAAGG+TGG	+	chr4_3:9291929-9291948	None:intergenic	40.0%
	TGGCTCAGCAAAACTATTGA+AGG	+	chr4_3:9291932-9291951	None:intergenic	40.0%
	GCACAATGTAGCGACTATAA+AGG	+	chr4_3:9292158-9292177	None:intergenic	40.0%
	ATGAGATTTGAGTGTGAGGA+GGG	+	chr4_3:9290690-9290709	None:intergenic	40.0%
!	GTGGTATAACGAGGTAGTTT+TGG	+	chr4_3:9290759-9290778	None:intergenic	40.0%
	AATAGGAAGACACAACATCG+TGG	+	chr4_3:9290778-9290797	None:intergenic	40.0%
!!!	TAACGGCGTTGTTTTTCCTA+TGG	-	chr4_3:9290824-9290843	Msa0628640:three_prime_UTR	40.0%
	TTTCTGGGTTTAATGGCCAT+AGG	+	chr4_3:9290843-9290862	None:intergenic	40.0%
	TCAGCACTTAATGGTGGTAA+CGG	+	chr4_3:9290907-9290926	None:intergenic	40.0%
!	AAGTATCGTGGGCATAAACT+TGG	-	chr4_3:9291006-9291025	Msa0628640:CDS	40.0%
!	GTGTTTGGTGAACTTGAGTA+TGG	-	chr4_3:9291078-9291097	Msa0628640:CDS	40.0%
	TTTGGTGAACTTGAGTATGG+TGG	-	chr4_3:9291081-9291100	Msa0628640:CDS	40.0%
	AAGATTTCCCACAACTCCAA+CGG	+	chr4_3:9291175-9291194	None:intergenic	40.0%
	GGTCTATAAATCGGTCGATA+TGG	+	chr4_3:9291350-9291369	None:intergenic	40.0%
	AACAAGCGAAAAGGCCAAAT+TGG	-	chr4_3:9291375-9291394	Msa0628640:intron	40.0%
	TGAATCAACATCAACCGCTA+TGG	-	chr4_3:9291597-9291616	Msa0628640:intron	40.0%
	ATTGCTGTACCATCGTTTGT+CGG	-	chr4_3:9291658-9291677	Msa0628640:intron	40.0%
!	TCATTTGTACCGACAAACGA+TGG	+	chr4_3:9291670-9291689	None:intergenic	40.0%
	CTCAGCAAAACTATTGAAGG+TGG	+	chr4_3:9291929-9291948	None:intergenic	40.0%
	TGGCTCAGCAAAACTATTGA+AGG	+	chr4_3:9291932-9291951	None:intergenic	40.0%
	GCACAATGTAGCGACTATAA+AGG	+	chr4_3:9292158-9292177	None:intergenic	40.0%
	CACAACATCGTGGTATAACG+AGG	+	chr4_3:9290768-9290787	None:intergenic	45.0%
	CAGCACTTAATGGTGGTAAC+GGG	+	chr4_3:9290906-9290925	None:intergenic	45.0%
	GACACATCAGCACTTAATGG+TGG	+	chr4_3:9290913-9290932	None:intergenic	45.0%
!!	GAGCTAGCTGAAGTTGATGT+GGG	-	chr4_3:9290979-9290998	Msa0628640:three_prime_UTR	45.0%
!	ATGTGGGCATCAAGTATCGT+GGG	-	chr4_3:9290995-9291014	Msa0628640:exon	45.0%
	TGGGCATAAACTTGGTCATG+TGG	-	chr4_3:9291014-9291033	Msa0628640:CDS	45.0%
	AACTTGGTCATGTGGAAACG+AGG	-	chr4_3:9291022-9291041	Msa0628640:CDS	45.0%
	ACTTGGTCATGTGGAAACGA+GGG	-	chr4_3:9291023-9291042	Msa0628640:CDS	45.0%
	TGGGGTTCAGAACATGTGTT+TGG	-	chr4_3:9291063-9291082	Msa0628640:CDS	45.0%
	AAATGTGCCACATCTGGAGA+AGG	+	chr4_3:9291111-9291130	None:intergenic	45.0%
	TGCATCAAATGTGCCACATC+TGG	+	chr4_3:9291117-9291136	None:intergenic	45.0%
	AGATGTGGCACATTTGATGC+AGG	-	chr4_3:9291116-9291135	Msa0628640:intron	45.0%
!	GTTCATTTTCACACTGCCGT+TGG	-	chr4_3:9291156-9291175	Msa0628640:intron	45.0%
	GTTGGAGTTGTGGGAAATCT+TGG	-	chr4_3:9291174-9291193	Msa0628640:intron	45.0%
	GACCGGTTAAACAAGCGAAA+AGG	-	chr4_3:9291366-9291385	Msa0628640:intron	45.0%
!	GGCCTTTTCGCTTGTTTAAC+CGG	+	chr4_3:9291371-9291390	None:intergenic	45.0%
	AGCCAACTGAATTAAGCTCG+CGG	+	chr4_3:9292037-9292056	None:intergenic	45.0%
	CGAGCTTAATTCAGTTGGCT+GGG	-	chr4_3:9292037-9292056	Msa0628640:intron	45.0%
	AATTCAGTTGGCTGGGACAA+TGG	-	chr4_3:9292044-9292063	Msa0628640:intron	45.0%
	CAACAAGGCCAGGTCTATAA+CGG	+	chr4_3:9292404-9292423	None:intergenic	45.0%
!!	TTATAGACCTGGCCTTGTTG+AGG	-	chr4_3:9292404-9292423	Msa0628640:CDS	45.0%
	GATGAGATTTGAGTGTGAGG+AGG	+	chr4_3:9290691-9290710	None:intergenic	45.0%
	CACAACATCGTGGTATAACG+AGG	+	chr4_3:9290768-9290787	None:intergenic	45.0%
	CAGCACTTAATGGTGGTAAC+GGG	+	chr4_3:9290906-9290925	None:intergenic	45.0%
	GACACATCAGCACTTAATGG+TGG	+	chr4_3:9290913-9290932	None:intergenic	45.0%
!!	GAGCTAGCTGAAGTTGATGT+GGG	-	chr4_3:9290979-9290998	Msa0628640:three_prime_UTR	45.0%
!	ATGTGGGCATCAAGTATCGT+GGG	-	chr4_3:9290995-9291014	Msa0628640:exon	45.0%
	TGGGCATAAACTTGGTCATG+TGG	-	chr4_3:9291014-9291033	Msa0628640:CDS	45.0%
	AACTTGGTCATGTGGAAACG+AGG	-	chr4_3:9291022-9291041	Msa0628640:CDS	45.0%
	ACTTGGTCATGTGGAAACGA+GGG	-	chr4_3:9291023-9291042	Msa0628640:CDS	45.0%
	TGGGGTTCAGAACATGTGTT+TGG	-	chr4_3:9291063-9291082	Msa0628640:CDS	45.0%
	AAATGTGCCACATCTGGAGA+AGG	+	chr4_3:9291111-9291130	None:intergenic	45.0%
	TGCATCAAATGTGCCACATC+TGG	+	chr4_3:9291117-9291136	None:intergenic	45.0%
	AGATGTGGCACATTTGATGC+AGG	-	chr4_3:9291116-9291135	Msa0628640:intron	45.0%
!	GTTCATTTTCACACTGCCGT+TGG	-	chr4_3:9291156-9291175	Msa0628640:intron	45.0%
	GTTGGAGTTGTGGGAAATCT+TGG	-	chr4_3:9291174-9291193	Msa0628640:intron	45.0%
	GACCGGTTAAACAAGCGAAA+AGG	-	chr4_3:9291366-9291385	Msa0628640:intron	45.0%
!	GGCCTTTTCGCTTGTTTAAC+CGG	+	chr4_3:9291371-9291390	None:intergenic	45.0%
	AGCCAACTGAATTAAGCTCG+CGG	+	chr4_3:9292037-9292056	None:intergenic	45.0%
	CGAGCTTAATTCAGTTGGCT+GGG	-	chr4_3:9292037-9292056	Msa0628640:intron	45.0%
	AATTCAGTTGGCTGGGACAA+TGG	-	chr4_3:9292044-9292063	Msa0628640:intron	45.0%
	CAACAAGGCCAGGTCTATAA+CGG	+	chr4_3:9292404-9292423	None:intergenic	45.0%
!!	TTATAGACCTGGCCTTGTTG+AGG	-	chr4_3:9292404-9292423	Msa0628640:CDS	45.0%
!!	AAAAAAAAAATTAATGTTAA+CGG	+	chr4_3:9291413-9291432	None:intergenic	5.0%
!!	AAAAAAAAAATTAATGTTAA+CGG	+	chr4_3:9291413-9291432	None:intergenic	5.0%
!!	GGAGCTAGCTGAAGTTGATG+TGG	-	chr4_3:9290978-9290997	Msa0628640:three_prime_UTR	50.0%
!	GATGTGGGCATCAAGTATCG+TGG	-	chr4_3:9290994-9291013	Msa0628640:exon	50.0%
	CTTGGTCATGTGGAAACGAG+GGG	-	chr4_3:9291024-9291043	Msa0628640:CDS	50.0%
	TGGACTTCCTTCTCCAGATG+TGG	-	chr4_3:9291101-9291120	Msa0628640:intron	50.0%
	GGCACATTTGATGCAGGATC+TGG	-	chr4_3:9291122-9291141	Msa0628640:intron	50.0%
	TGCAGGATCTGGCTAAGAAG+AGG	-	chr4_3:9291133-9291152	Msa0628640:intron	50.0%
	GCAGGATCTGGCTAAGAAGA+GGG	-	chr4_3:9291134-9291153	Msa0628640:intron	50.0%
	TCCCGCGAGCTTAATTCAGT+TGG	-	chr4_3:9292032-9292051	Msa0628640:intron	50.0%
	GCCAACTGAATTAAGCTCGC+GGG	+	chr4_3:9292036-9292055	None:intergenic	50.0%
	GCGAGCTTAATTCAGTTGGC+TGG	-	chr4_3:9292036-9292055	Msa0628640:intron	50.0%
	TGTAAGACCTCAACAAGGCC+AGG	+	chr4_3:9292414-9292433	None:intergenic	50.0%
!	ATCTTTTGCGCTTCGTCCCA+TGG	+	chr4_3:9292563-9292582	None:intergenic	50.0%
	ATGGGACGAAGCGCAAAAGA+TGG	-	chr4_3:9292562-9292581	Msa0628640:CDS	50.0%
!!	GGAGCTAGCTGAAGTTGATG+TGG	-	chr4_3:9290978-9290997	Msa0628640:three_prime_UTR	50.0%
!	GATGTGGGCATCAAGTATCG+TGG	-	chr4_3:9290994-9291013	Msa0628640:exon	50.0%
	CTTGGTCATGTGGAAACGAG+GGG	-	chr4_3:9291024-9291043	Msa0628640:CDS	50.0%
	TGGACTTCCTTCTCCAGATG+TGG	-	chr4_3:9291101-9291120	Msa0628640:intron	50.0%
	GGCACATTTGATGCAGGATC+TGG	-	chr4_3:9291122-9291141	Msa0628640:intron	50.0%
	TGCAGGATCTGGCTAAGAAG+AGG	-	chr4_3:9291133-9291152	Msa0628640:intron	50.0%
	GCAGGATCTGGCTAAGAAGA+GGG	-	chr4_3:9291134-9291153	Msa0628640:intron	50.0%
	TCCCGCGAGCTTAATTCAGT+TGG	-	chr4_3:9292032-9292051	Msa0628640:intron	50.0%
	GCCAACTGAATTAAGCTCGC+GGG	+	chr4_3:9292036-9292055	None:intergenic	50.0%
	GCGAGCTTAATTCAGTTGGC+TGG	-	chr4_3:9292036-9292055	Msa0628640:intron	50.0%
	TGTAAGACCTCAACAAGGCC+AGG	+	chr4_3:9292414-9292433	None:intergenic	50.0%
!	ATCTTTTGCGCTTCGTCCCA+TGG	+	chr4_3:9292563-9292582	None:intergenic	50.0%
	ATGGGACGAAGCGCAAAAGA+TGG	-	chr4_3:9292562-9292581	Msa0628640:CDS	50.0%
	GTCATGTGGAAACGAGGGGT+TGG	-	chr4_3:9291028-9291047	Msa0628640:CDS	55.0%
	TCACACTGCCGTTGGAGTTG+TGG	-	chr4_3:9291164-9291183	Msa0628640:intron	55.0%
	CACACTGCCGTTGGAGTTGT+GGG	-	chr4_3:9291165-9291184	Msa0628640:intron	55.0%
	TAAGCTCGCGGGACAGTTGT+GGG	+	chr4_3:9292025-9292044	None:intergenic	55.0%
	TTAAGCTCGCGGGACAGTTG+TGG	+	chr4_3:9292026-9292045	None:intergenic	55.0%
	GTCATGTGGAAACGAGGGGT+TGG	-	chr4_3:9291028-9291047	Msa0628640:CDS	55.0%
	TCACACTGCCGTTGGAGTTG+TGG	-	chr4_3:9291164-9291183	Msa0628640:intron	55.0%
	CACACTGCCGTTGGAGTTGT+GGG	-	chr4_3:9291165-9291184	Msa0628640:intron	55.0%
	TAAGCTCGCGGGACAGTTGT+GGG	+	chr4_3:9292025-9292044	None:intergenic	55.0%
	TTAAGCTCGCGGGACAGTTG+TGG	+	chr4_3:9292026-9292045	None:intergenic	55.0%
!	AAACGAGGGGTTGGCACGTG+AGG	-	chr4_3:9291037-9291056	Msa0628640:CDS	60.0%
!	AACGAGGGGTTGGCACGTGA+GGG	-	chr4_3:9291038-9291057	Msa0628640:CDS	60.0%
!	AAACGAGGGGTTGGCACGTG+AGG	-	chr4_3:9291037-9291056	Msa0628640:CDS	60.0%
!	AACGAGGGGTTGGCACGTGA+GGG	-	chr4_3:9291038-9291057	Msa0628640:CDS	60.0%
!	ACGAGGGGTTGGCACGTGAG+GGG	-	chr4_3:9291039-9291058	Msa0628640:CDS	65.0%
!	GGGTTGGCACGTGAGGGGTT+GGG	-	chr4_3:9291044-9291063	Msa0628640:CDS	65.0%
	GGTTGGCACGTGAGGGGTTG+GGG	-	chr4_3:9291045-9291064	Msa0628640:CDS	65.0%
!	ACGAGGGGTTGGCACGTGAG+GGG	-	chr4_3:9291039-9291058	Msa0628640:CDS	65.0%
!	GGGTTGGCACGTGAGGGGTT+GGG	-	chr4_3:9291044-9291063	Msa0628640:CDS	65.0%
	GGTTGGCACGTGAGGGGTTG+GGG	-	chr4_3:9291045-9291064	Msa0628640:CDS	65.0%
!	GGGGTTGGCACGTGAGGGGT+TGG	-	chr4_3:9291043-9291062	Msa0628640:CDS	70.0%
!	GGGGTTGGCACGTGAGGGGT+TGG	-	chr4_3:9291043-9291062	Msa0628640:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	9290690	9292724	9290690	ID=Msa0628640;Name=Msa0628640
chr4_3	mRNA	9290690	9292724	9290690	ID=Msa0628640-mRNA-1;Parent=Msa0628640;Name=Msa0628640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=43\|1\|1\|1\|0\|0\|2\|315\|197
chr4_3	exon	9290690	9291100	9290690	ID=Msa0628640-mRNA-1:exon:2808;Parent=Msa0628640-mRNA-1
chr4_3	exon	9292184	9292724	9292184	ID=Msa0628640-mRNA-1:exon:2807;Parent=Msa0628640-mRNA-1
chr4_3	five_prime_UTR	9292682	9292724	9292682	ID=Msa0628640-mRNA-1:five_prime_utr;Parent=Msa0628640-mRNA-1
chr4_3	CDS	9292184	9292681	9292184	ID=Msa0628640-mRNA-1:cds;Parent=Msa0628640-mRNA-1
chr4_3	CDS	9291005	9291100	9291005	ID=Msa0628640-mRNA-1:cds;Parent=Msa0628640-mRNA-1
chr4_3	three_prime_UTR	9290690	9291004	9290690	ID=Msa0628640-mRNA-1:three_prime_utr;Parent=Msa0628640-mRNA-1

Gene Sequence

>Msa0628640

ATGACATACTCAAAACAAAACACCCAAAACTACCTCGTTATACCACGATGTTGTGTCTTCCTATTATGGATAGTGTTTCTAACATTGTGTATAACGGCGTTGTTTTTCCTATGGCCATTAAACCCAGAAATTGAAATGGAAAATTTAATAGTAAAACGAGCAAAAGTTCACCCGTTACCACCATTAAGTGCTGATGTGTCATTATCAGTAACCGTTAAAATTCACAACAAGGTTTTGTATTGGATGGAGCTAGCTGAAGTTGATGTGGGCATCAAGTATCGTGGGCATAAACTTGGTCATGTGGAAACGAGGGGTTGGCACGTGAGGGGTTGGGGTTCAGAACATGTGTTTGGTGAACTTGAGTATGGTGGACTTCCTTCTCCAGATGTGGCACATTTGATGCAGGATCTGGCTAAGAAGAGGGTTCATTTTCACACTGCCGTTGGAGTTGTGGGAAATCTTGGACTCTTTGCCTTTCACTTCCCTAATATTTTCAAGGTAAAACTATCATGTGAGGTTTTGGTGAATACAAAGAACCATACCATTGTACATCAACATTGTGTTGAAAAGGTAAAGCTTAAGAAACCGTTATAG

Protein sequence

>Msa0628640

MTYSKQNTQNYLVIPRCCVFLLWIVFLTLCITALFFLWPLNPEIEMENLIVKRAKVHPLPPLSADVSLSVTVKIHNKVLYWMELAEVDVGIKYRGHKLGHVETRGWHVRGWGSEHVFGELEYGGLPSPDVAHLMQDLAKKRVHFHTAVGVVGNLGLFAFHFPNIFKVKLSCEVLVNTKNHTIVHQHCVEKVKLKKPL*