Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185380 | XP_024641792.1 | 90.945 | 762 | 41 | 3 | 1 | 734 | 1 | 762 | 0.0 | 1420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185380 | sp|Q764T8|LUPS_GLYGL | 80.105 | 759 | 117 | 5 | 1 | 728 | 1 | 756 | 0.0 | 1230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185380 | A0A072UN62 | 90.945 | 762 | 41 | 3 | 1 | 734 | 1 | 762 | 0.0 | 1420 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0141100 | Msa0185380 | 0.824163 | 9.369102e-54 | -8.615850e-47 |
| Msa0183750 | Msa0185380 | 0.821054 | 4.950400e-53 | -8.615850e-47 |
| Msa0185380 | Msa0374850 | 0.817257 | 3.621338e-52 | -8.615850e-47 |
| Msa0185380 | Msa0375090 | 0.814984 | 1.165999e-51 | -8.615850e-47 |
| Msa0185380 | Msa0385670 | 0.806316 | 8.729675e-50 | -8.615850e-47 |
| Msa0185380 | Msa0470340 | 0.816435 | 5.539734e-52 | -8.615850e-47 |
| Msa0185380 | Msa0470860 | 0.815848 | 7.493094e-52 | -8.615850e-47 |
| Msa0185380 | Msa0480950 | 0.819071 | 1.407846e-52 | -8.615850e-47 |
| Msa0185380 | Msa0531430 | 0.803697 | 3.080008e-49 | -8.615850e-47 |
| Msa0185380 | Msa0565600 | 0.819603 | 1.065067e-52 | -8.615850e-47 |
| Msa0185380 | Msa0590800 | 0.815339 | 9.727616e-52 | -8.615850e-47 |
| Msa0185380 | Msa0618180 | 0.807819 | 4.196266e-50 | -8.615850e-47 |
| Msa0185380 | Msa0628640 | 0.802887 | 4.532917e-49 | -8.615850e-47 |
| Msa0185380 | Msa0669340 | 0.809024 | 2.321275e-50 | -8.615850e-47 |
| Msa0185380 | Msa0701970 | 0.801993 | 6.925623e-49 | -8.615850e-47 |
| Msa0185380 | Msa0716450 | 0.810075 | 1.380094e-50 | -8.615850e-47 |
| Msa0185380 | Msa0717260 | 0.807195 | 5.692148e-50 | -8.615850e-47 |
| Msa0185380 | Msa0758320 | 0.813076 | 3.074009e-51 | -8.615850e-47 |
| Msa0185380 | Msa0837980 | 0.829347 | 5.416295e-55 | -8.615850e-47 |
| Msa0185380 | Msa0853320 | 0.826896 | 2.108739e-54 | -8.615850e-47 |
| Msa0185380 | Msa0966340 | 0.960174 | 2.922560e-118 | -8.615850e-47 |
| Msa0185380 | Msa0966440 | 0.951078 | 4.353729e-109 | -8.615850e-47 |
| Msa0185380 | Msa1001770 | 0.970996 | 1.787853e-132 | -8.615850e-47 |
| Msa0185380 | Msa1190120 | 0.800533 | 1.378138e-48 | -8.615850e-47 |
| Msa0185380 | Msa1211550 | 0.820323 | 7.290009e-53 | -8.615850e-47 |
| Msa0185380 | Msa1219260 | 0.806189 | 9.283835e-50 | -8.615850e-47 |
| Msa0185380 | Msa1266960 | 0.808627 | 2.821887e-50 | -8.615850e-47 |
| Msa0185380 | Msa1339940 | 0.811774 | 5.916463e-51 | -8.615850e-47 |
| Msa0185380 | Msa1381140 | 0.967713 | 1.169362e-127 | -8.615850e-47 |
| Msa0185380 | Msa1395870 | 0.807750 | 4.338710e-50 | -8.615850e-47 |
| Msa0185380 | Msa1399560 | 0.805110 | 1.563969e-49 | -8.615850e-47 |
| Msa0185380 | Msa1437190 | 0.812281 | 4.588396e-51 | -8.615850e-47 |
| Msa0185380 | Msa1452060 | 0.817060 | 4.011282e-52 | -8.615850e-47 |
| Msa0185380 | Msa1460380 | 0.813812 | 2.117331e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185380 | MtrunA17_Chr6g0488881 | 89.836 | 669 | 40 | 3 | 1 | 641 | 1 | 669 | 0.0 | 1225 |
| Msa0185380 | MtrunA17_Chr4g0000131 | 56.785 | 759 | 289 | 5 | 1 | 724 | 1 | 755 | 0.0 | 899 |
| Msa0185380 | MtrunA17_Chr4g0020031 | 55.000 | 760 | 302 | 6 | 1 | 724 | 1 | 756 | 0.0 | 877 |
| Msa0185380 | MtrunA17_Chr7g0228111 | 54.737 | 760 | 304 | 6 | 1 | 724 | 1 | 756 | 0.0 | 867 |
| Msa0185380 | MtrunA17_Chr5g0396321 | 55.673 | 758 | 299 | 6 | 1 | 725 | 1 | 754 | 0.0 | 863 |
| Msa0185380 | MtrunA17_Chr6g0488821 | 53.048 | 771 | 311 | 10 | 1 | 725 | 1 | 766 | 0.0 | 822 |
| Msa0185380 | MtrunA17_Chr3g0090601 | 51.429 | 700 | 259 | 7 | 59 | 724 | 34 | 686 | 0.0 | 734 |
| Msa0185380 | MtrunA17_Chr8g0342291 | 52.874 | 609 | 242 | 5 | 154 | 729 | 7 | 603 | 0.0 | 686 |
| Msa0185380 | MtrunA17_Chr4g0000191 | 59.213 | 483 | 179 | 2 | 260 | 724 | 18 | 500 | 0.0 | 608 |
| Msa0185380 | MtrunA17_Chr8g0342311 | 56.148 | 488 | 196 | 2 | 260 | 729 | 33 | 520 | 0.0 | 593 |
| Msa0185380 | MtrunA17_Chr7g0238841 | 52.323 | 495 | 207 | 4 | 260 | 725 | 18 | 512 | 0.0 | 545 |
| Msa0185380 | MtrunA17_Chr6g0463651 | 71.084 | 249 | 55 | 1 | 477 | 708 | 1 | 249 | 3.33e-121 | 363 |
| Msa0185380 | MtrunA17_Chr6g0463701 | 74.074 | 216 | 56 | 0 | 296 | 511 | 12 | 227 | 5.63e-119 | 357 |
| Msa0185380 | MtrunA17_Chr6g0486411 | 59.233 | 287 | 112 | 3 | 441 | 725 | 2 | 285 | 5.65e-116 | 350 |
| Msa0185380 | MtrunA17_Chr8g0342271 | 52.159 | 301 | 124 | 3 | 154 | 438 | 15 | 311 | 1.21e-113 | 347 |
| Msa0185380 | MtrunA17_Chr6g0463661 | 75.294 | 170 | 42 | 0 | 309 | 478 | 1 | 170 | 1.10e-93 | 288 |
| Msa0185380 | MtrunA17_Chr6g0463721 | 82.166 | 157 | 28 | 0 | 1 | 157 | 1 | 157 | 1.97e-85 | 268 |
| Msa0185380 | MtrunA17_Chr7g0238831 | 51.779 | 253 | 109 | 3 | 1 | 241 | 1 | 252 | 1.81e-82 | 264 |
| Msa0185380 | MtrunA17_Chr4g0000181 | 55.056 | 178 | 80 | 0 | 64 | 241 | 1 | 178 | 2.49e-68 | 223 |
| Msa0185380 | MtrunA17_Chr6g0486401 | 52.083 | 192 | 90 | 2 | 260 | 449 | 18 | 209 | 8.67e-67 | 219 |
| Msa0185380 | MtrunA17_Chr8g0342321 | 51.149 | 174 | 85 | 0 | 68 | 241 | 6 | 179 | 7.87e-64 | 211 |
| Msa0185380 | MtrunA17_Chr6g0486391 | 53.846 | 169 | 75 | 2 | 90 | 258 | 4 | 169 | 4.34e-59 | 197 |
| Msa0185380 | MtrunA17_Chr8g0342251 | 45.854 | 205 | 88 | 2 | 510 | 691 | 1 | 205 | 2.46e-57 | 194 |
| Msa0185380 | MtrunA17_Chr6g0463691 | 77.391 | 115 | 26 | 0 | 586 | 700 | 16 | 130 | 3.38e-53 | 180 |
| Msa0185380 | MtrunA17_Chr8g0342301 | 50.314 | 159 | 77 | 1 | 1 | 157 | 1 | 159 | 2.05e-48 | 168 |
| Msa0185380 | MtrunA17_Chr8g0342241 | 43.820 | 178 | 78 | 2 | 477 | 637 | 2 | 174 | 4.14e-41 | 148 |
| Msa0185380 | MtrunA17_Chr6g0488871 | 96.667 | 60 | 2 | 0 | 675 | 734 | 1 | 60 | 5.42e-35 | 126 |
| Msa0185380 | MtrunA17_Chr8g0342281 | 47.015 | 134 | 69 | 1 | 1 | 132 | 1 | 134 | 1.29e-34 | 128 |
| Msa0185380 | MtrunA17_Chr8g0342261 | 63.793 | 58 | 21 | 0 | 437 | 494 | 31 | 88 | 5.46e-21 | 89.0 |
| Msa0185380 | MtrunA17_Chr8g0342331 | 57.353 | 68 | 27 | 1 | 1 | 66 | 1 | 68 | 5.78e-20 | 85.1 |
| Msa0185380 | MtrunA17_Chr6g0486381 | 56.944 | 72 | 27 | 2 | 1 | 68 | 1 | 72 | 2.01e-18 | 80.5 |
| Msa0185380 | MtrunA17_Chr3g0090611 | 45.679 | 81 | 42 | 1 | 1 | 79 | 1 | 81 | 1.54e-17 | 78.2 |
| Msa0185380 | MtrunA17_Chr6g0463671 | 78.571 | 42 | 9 | 0 | 260 | 301 | 18 | 59 | 4.13e-17 | 75.9 |
| Msa0185380 | MtrunA17_Chr6g0463711 | 86.486 | 37 | 5 | 0 | 260 | 296 | 18 | 54 | 2.93e-16 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185380 | AT2G07050.1 | 56.693 | 762 | 291 | 6 | 1 | 728 | 1 | 757 | 0.0 | 896 |
| Msa0185380 | AT1G78955.1 | 55.000 | 760 | 302 | 5 | 1 | 724 | 1 | 756 | 0.0 | 854 |
| Msa0185380 | AT1G78960.2 | 53.553 | 760 | 321 | 6 | 1 | 728 | 1 | 760 | 0.0 | 852 |
| Msa0185380 | AT1G78960.1 | 53.553 | 760 | 321 | 6 | 1 | 728 | 1 | 760 | 0.0 | 852 |
| Msa0185380 | AT1G78960.3 | 53.553 | 760 | 321 | 6 | 1 | 728 | 1 | 760 | 0.0 | 852 |
| Msa0185380 | AT1G78950.2 | 53.816 | 760 | 311 | 5 | 1 | 724 | 10 | 765 | 0.0 | 846 |
| Msa0185380 | AT1G78950.1 | 53.816 | 760 | 311 | 5 | 1 | 724 | 1 | 756 | 0.0 | 845 |
| Msa0185380 | AT1G66960.2 | 51.394 | 753 | 334 | 5 | 1 | 721 | 10 | 762 | 0.0 | 809 |
| Msa0185380 | AT1G66960.3 | 51.394 | 753 | 334 | 5 | 1 | 721 | 1 | 753 | 0.0 | 808 |
| Msa0185380 | AT1G66960.1 | 51.394 | 753 | 334 | 5 | 1 | 721 | 1 | 753 | 0.0 | 808 |
| Msa0185380 | AT1G66960.4 | 51.394 | 753 | 334 | 5 | 1 | 721 | 1 | 753 | 0.0 | 808 |
| Msa0185380 | AT1G78960.4 | 53.389 | 723 | 305 | 6 | 1 | 691 | 1 | 723 | 0.0 | 803 |
| Msa0185380 | AT1G78970.1 | 52.763 | 760 | 318 | 8 | 1 | 725 | 1 | 754 | 0.0 | 803 |
| Msa0185380 | AT1G78970.2 | 52.763 | 760 | 318 | 8 | 1 | 725 | 1 | 754 | 0.0 | 803 |
| Msa0185380 | AT1G78970.3 | 52.763 | 760 | 318 | 8 | 1 | 725 | 1 | 754 | 0.0 | 803 |
| Msa0185380 | AT2G07050.2 | 57.186 | 668 | 248 | 5 | 94 | 728 | 4 | 666 | 0.0 | 796 |
| Msa0185380 | AT1G78955.4 | 54.755 | 694 | 277 | 4 | 64 | 724 | 2 | 691 | 0.0 | 781 |
| Msa0185380 | AT3G45130.2 | 52.825 | 761 | 318 | 9 | 1 | 726 | 1 | 755 | 0.0 | 756 |
| Msa0185380 | AT3G45130.4 | 52.825 | 761 | 318 | 9 | 1 | 726 | 1 | 755 | 0.0 | 756 |
| Msa0185380 | AT3G45130.1 | 52.825 | 761 | 318 | 9 | 1 | 726 | 1 | 755 | 0.0 | 756 |
| Msa0185380 | AT3G45130.5 | 52.825 | 761 | 318 | 9 | 1 | 726 | 1 | 755 | 0.0 | 756 |
| Msa0185380 | AT3G45130.3 | 52.825 | 761 | 318 | 9 | 1 | 726 | 1 | 755 | 0.0 | 756 |
| Msa0185380 | AT1G78955.2 | 53.858 | 661 | 268 | 4 | 64 | 691 | 2 | 658 | 0.0 | 725 |
| Msa0185380 | AT5G36150.1 | 45.899 | 756 | 377 | 5 | 1 | 724 | 1 | 756 | 0.0 | 716 |
| Msa0185380 | AT5G36150.2 | 45.899 | 756 | 377 | 5 | 1 | 724 | 1 | 756 | 0.0 | 716 |
| Msa0185380 | AT1G78500.2 | 47.625 | 758 | 359 | 8 | 1 | 720 | 1 | 758 | 0.0 | 716 |
| Msa0185380 | AT1G78500.1 | 47.625 | 758 | 359 | 8 | 1 | 720 | 1 | 758 | 0.0 | 716 |
| Msa0185380 | AT1G78960.5 | 54.187 | 609 | 250 | 4 | 149 | 728 | 1 | 609 | 0.0 | 702 |
| Msa0185380 | AT5G48010.2 | 45.229 | 765 | 370 | 9 | 1 | 722 | 1 | 759 | 0.0 | 697 |
| Msa0185380 | AT4G15340.1 | 45.644 | 769 | 373 | 8 | 1 | 728 | 1 | 765 | 0.0 | 697 |
| Msa0185380 | AT4G15370.2 | 45.899 | 756 | 366 | 8 | 1 | 720 | 1 | 749 | 0.0 | 694 |
| Msa0185380 | AT4G15370.1 | 45.718 | 759 | 366 | 9 | 1 | 720 | 1 | 752 | 0.0 | 690 |
| Msa0185380 | AT5G48010.1 | 44.575 | 765 | 367 | 10 | 1 | 722 | 1 | 751 | 0.0 | 674 |
| Msa0185380 | AT5G42600.1 | 44.841 | 756 | 377 | 8 | 1 | 720 | 1 | 752 | 0.0 | 673 |
| Msa0185380 | AT1G78955.5 | 55.385 | 585 | 224 | 4 | 173 | 724 | 1 | 581 | 0.0 | 657 |
| Msa0185380 | AT1G78955.3 | 53.213 | 607 | 247 | 4 | 64 | 637 | 2 | 604 | 0.0 | 654 |
| Msa0185380 | AT3G29255.1 | 41.667 | 756 | 341 | 10 | 2 | 720 | 6 | 698 | 0.0 | 593 |
| Msa0185380 | AT4G15340.2 | 46.325 | 585 | 286 | 7 | 1 | 561 | 1 | 581 | 0.0 | 539 |
| Msa0185380 | AT1G78480.1 | 34.615 | 156 | 87 | 5 | 49 | 197 | 29 | 176 | 1.87e-18 | 84.7 |
Find 216 sgRNAs with CRISPR-Local
Find 626 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATATATGTTGAGATAATT+TGG | 0.169555 | 1_4:+75523725 | None:intergenic |
| AATTTGCACGGTTGTCTTCT+AGG | 0.195387 | 1_4:+75514308 | None:intergenic |
| TGGGCTTTGTTGTCCCTTAT+CGG | 0.261922 | 1_4:-75514271 | Msa0185380:CDS |
| ATCCACTTCCACCAGAATTC+TGG | 0.268631 | 1_4:-75516709 | Msa0185380:intron |
| CTCACTACCCAGGTGCTAAT+TGG | 0.269588 | 1_4:-75513806 | Msa0185380:three_prime_UTR |
| AGGTGTCGTTAATATTATTA+AGG | 0.272115 | 1_4:-75523764 | Msa0185380:five_prime_UTR |
| TTCCATCATGGGGAAAGTTC+TGG | 0.280761 | 1_4:-75516862 | Msa0185380:CDS |
| CCCGAATCCCTGATTACTTC+TGG | 0.281207 | 1_4:-75516014 | Msa0185380:CDS |
| CAACTACCTGTGAGGCCTTC+AGG | 0.291777 | 1_4:+75515510 | None:intergenic |
| GCCTTGTCTTCACCATCTTC+AGG | 0.293538 | 1_4:+75516935 | None:intergenic |
| CTTCTCTCAGTGATTTGATT+AGG | 0.298981 | 1_4:+75516477 | None:intergenic |
| AGTTTAACTGCTGGTGGAAT+GGG | 0.308591 | 1_4:+75518865 | None:intergenic |
| TTTGGTAGAAACCAGAATTC+TGG | 0.308766 | 1_4:+75516698 | None:intergenic |
| CAATGGAGAGATGCAGAAAT+TGG | 0.310238 | 1_4:-75516913 | Msa0185380:CDS |
| ATAATATATATACCTTGTTT+TGG | 0.312394 | 1_4:+75514401 | None:intergenic |
| AGAGAAGAAGATATCATAAC+AGG | 0.329769 | 1_4:-75518841 | Msa0185380:CDS |
| TTGTGCTATGACCCTCTATA+TGG | 0.332950 | 1_4:+75517008 | None:intergenic |
| TAACTTCATTCCACGGTGTA+TGG | 0.336068 | 1_4:+75514113 | None:intergenic |
| TCTTGTGGTGTTCCTGCATT+TGG | 0.337805 | 1_4:+75523587 | None:intergenic |
| TTCAATGAAATGAATTGCTT+TGG | 0.353217 | 1_4:+75514755 | None:intergenic |
| GTAATGGCCCTCTATGTTAC+AGG | 0.353508 | 1_4:-75518496 | Msa0185380:CDS |
| TTCGATATGATGAGTAGTTC+AGG | 0.355276 | 1_4:+75513916 | None:intergenic |
| GAGGTCAGAACTTTGTTTGA+TGG | 0.356213 | 1_4:+75523514 | None:intergenic |
| CATAACATATCTTGAATCAT+AGG | 0.357423 | 1_4:+75516246 | None:intergenic |
| ACAATTCAAGGTGCAGCATT+TGG | 0.361763 | 1_4:+75513834 | None:intergenic |
| CTATGATTCAAGATATGTTA+TGG | 0.368024 | 1_4:-75516245 | Msa0185380:CDS |
| AGTTTGTATGCCTCTGAGTT+CGG | 0.368801 | 1_4:+75516045 | None:intergenic |
| AAATTCTTACAGTTGGTTAG+AGG | 0.371127 | 1_4:-75515135 | Msa0185380:intron |
| GTTTGTATGCCTCTGAGTTC+GGG | 0.373213 | 1_4:+75516046 | None:intergenic |
| CCTTGACCATGGTGGTTTAG+TGG | 0.374435 | 1_4:-75516888 | Msa0185380:CDS |
| TTCCAGTTGATTTGATCATA+AGG | 0.375182 | 1_4:+75516440 | None:intergenic |
| AACCTTAGCAATAGTATTCC+GGG | 0.376806 | 1_4:+75516412 | None:intergenic |
| GGATCCCTTGATGAGGTTCT+AGG | 0.377958 | 1_4:-75518475 | Msa0185380:CDS |
| GCCAGAAGTAATCAGGGATT+CGG | 0.379265 | 1_4:+75516013 | None:intergenic |
| TCTGCAAGCCAGAAGTAATC+AGG | 0.379292 | 1_4:+75516006 | None:intergenic |
| CAGTTTAACTGCTGGTGGAA+TGG | 0.379805 | 1_4:+75518864 | None:intergenic |
| TTGTCAAAGCAGCTTCCTAA+TGG | 0.380943 | 1_4:-75514451 | Msa0185380:CDS |
| CTGCCAGAAAATACAAAATT+CGG | 0.382313 | 1_4:+75513739 | None:intergenic |
| ATGCCCATGTCATATCTATA+TGG | 0.382738 | 1_4:-75516526 | Msa0185380:CDS |
| ATTTCTGTGAATAACTTCAT+AGG | 0.384332 | 1_4:-75523632 | Msa0185380:CDS |
| ATCGAAACATCTTTCCCATA+TGG | 0.386037 | 1_4:-75513899 | Msa0185380:CDS |
| TTGTTGTCCCTTATCGGTGC+AGG | 0.386134 | 1_4:-75514265 | Msa0185380:CDS |
| TGTCAAAGCAGCTTCCTAAT+GGG | 0.387123 | 1_4:-75514450 | Msa0185380:CDS |
| AATAATGAATGCAGAGCTTT+GGG | 0.387482 | 1_4:-75515628 | Msa0185380:intron |
| TATATATTGCCTTTCTGAAA+AGG | 0.390011 | 1_4:+75513609 | None:intergenic |
| AACCTTATGATCAAATCAAC+TGG | 0.400633 | 1_4:-75516442 | Msa0185380:CDS |
| TTTCCTTAGCTCTATGAGTT+GGG | 0.400737 | 1_4:+75514793 | None:intergenic |
| TAATAATGAATGCAGAGCTT+TGG | 0.407402 | 1_4:-75515629 | Msa0185380:intron |
| TAATGGCGGGTTCCCTGCTT+GGG | 0.410324 | 1_4:-75515165 | Msa0185380:CDS |
| TATGATTCAAGATATGTTAT+GGG | 0.411393 | 1_4:-75516244 | Msa0185380:CDS |
| ATACTCTCCCAGAGCCCATA+TGG | 0.417018 | 1_4:+75513884 | None:intergenic |
| GAGGGTCATAGCACAATGTT+TGG | 0.419263 | 1_4:-75517001 | Msa0185380:CDS |
| CATCTTTCCCATATGGGCTC+TGG | 0.420694 | 1_4:-75513892 | Msa0185380:CDS |
| GTAGCTTTGTGAAGAGATAC+AGG | 0.421470 | 1_4:+75514817 | None:intergenic |
| GATTTGATTAGGTCAGTGAT+AGG | 0.421520 | 1_4:+75516488 | None:intergenic |
| CACTGGCCTGCAGAATCTGC+TGG | 0.422487 | 1_4:-75518751 | Msa0185380:CDS |
| TCTTCTCTCAGTTTAACTGC+TGG | 0.428487 | 1_4:+75518856 | None:intergenic |
| TACTTCTGGCTTGCAGAAGA+TGG | 0.431129 | 1_4:-75516000 | Msa0185380:CDS |
| AAACCTTAGCAATAGTATTC+CGG | 0.434367 | 1_4:+75516411 | None:intergenic |
| TCTCTCAGTTTAACTGCTGG+TGG | 0.434390 | 1_4:+75518859 | None:intergenic |
| ATTTCCTTAGCTCTATGAGT+TGG | 0.436325 | 1_4:+75514792 | None:intergenic |
| AACCTGCCCTGCACCGATAA+GGG | 0.436795 | 1_4:+75514258 | None:intergenic |
| TCCATCATGGGGAAAGTTCT+GGG | 0.438199 | 1_4:-75516861 | Msa0185380:CDS |
| TAACCTGCCCTGCACCGATA+AGG | 0.438248 | 1_4:+75514257 | None:intergenic |
| TTGAAGACACACTGATTGAG+AGG | 0.442774 | 1_4:-75514988 | Msa0185380:CDS |
| CCAGAAGTAATCAGGGATTC+GGG | 0.443793 | 1_4:+75516014 | None:intergenic |
| ATGCAACTACAGGAGATAAC+AGG | 0.444350 | 1_4:-75513960 | Msa0185380:intron |
| GTTTAGTGGCTATTCCATCA+TGG | 0.446920 | 1_4:-75516874 | Msa0185380:CDS |
| TAATGCCTTCTGTCTAAGCT+TGG | 0.447789 | 1_4:+75516173 | None:intergenic |
| AAGATAGCAGAAGGAGGAGA+AGG | 0.447791 | 1_4:-75523659 | Msa0185380:CDS |
| CAAATTTAGTTCAAACTTCG+TGG | 0.454847 | 1_4:-75514291 | Msa0185380:CDS |
| ATAGAATACCAGGATCCATC+AGG | 0.456520 | 1_4:+75514721 | None:intergenic |
| GTAATGGCGGGTTCCCTGCT+TGG | 0.457885 | 1_4:-75515166 | Msa0185380:CDS |
| AAAATGCCAACTGATCTTGT+TGG | 0.460164 | 1_4:-75515251 | Msa0185380:CDS |
| ATTATGTTTGATAGCGCGTT+GGG | 0.462799 | 1_4:-75516076 | Msa0185380:CDS |
| AGCCTCAAAATTCTTACAGT+TGG | 0.465115 | 1_4:-75515142 | Msa0185380:CDS |
| AACCAGAATTCTGGTGGAAG+TGG | 0.466445 | 1_4:+75516707 | None:intergenic |
| TCGAAACATCTTTCCCATAT+GGG | 0.466714 | 1_4:-75513898 | Msa0185380:CDS |
| AGATGGAGATTTCCCACAAC+AGG | 0.476470 | 1_4:-75514070 | Msa0185380:intron |
| CACAAAACCCTGATGGATCC+TGG | 0.477094 | 1_4:-75514729 | Msa0185380:intron |
| AACAGTAGATACCTTTGCAT+TGG | 0.479394 | 1_4:-75516114 | Msa0185380:CDS |
| AACATAAGAAGGAAATTGTT+CGG | 0.480544 | 1_4:-75518447 | Msa0185380:CDS |
| TCAATCTCAGCATGTTCTTG+TGG | 0.480961 | 1_4:+75523572 | None:intergenic |
| ATCAATTCACAGATGGAAGA+TGG | 0.483390 | 1_4:-75514087 | Msa0185380:CDS |
| ACCCAGAACTTTCCCCATGA+TGG | 0.487722 | 1_4:+75516860 | None:intergenic |
| ATCTTTCCCATATGGGCTCT+GGG | 0.491199 | 1_4:-75513891 | Msa0185380:CDS |
| ATGGGGATTTCTTTATCATG+TGG | 0.493396 | 1_4:-75516226 | Msa0185380:CDS |
| ACTTCATAGGACGTCAACAC+TGG | 0.494111 | 1_4:-75523619 | Msa0185380:CDS |
| GTCCCTTATCGGTGCAGGGC+AGG | 0.495376 | 1_4:-75514260 | Msa0185380:intron |
| ACAATTTCCTTCTTATGTTG+AGG | 0.498096 | 1_4:+75518451 | None:intergenic |
| AATAGGTATGTTGAGTGCAC+TGG | 0.502674 | 1_4:-75514855 | Msa0185380:intron |
| CGCTACAGAGCAGTAATGGC+GGG | 0.502708 | 1_4:-75515178 | Msa0185380:CDS |
| CTCTCGCTACAGAGCAGTAA+TGG | 0.505047 | 1_4:-75515182 | Msa0185380:CDS |
| CATTGATTACAACAATAAGA+AGG | 0.505283 | 1_4:-75518813 | Msa0185380:CDS |
| TCTAGGACCTCAACATAAGA+AGG | 0.512830 | 1_4:-75518458 | Msa0185380:CDS |
| TGAAATGAATTGCTTTGGAA+AGG | 0.513073 | 1_4:+75514760 | None:intergenic |
| TTTAGTGGCTATTCCATCAT+GGG | 0.514005 | 1_4:-75516873 | Msa0185380:CDS |
| TCACGCTATATATAGGTACT+TGG | 0.516796 | 1_4:-75516755 | Msa0185380:intron |
| TAGTGAGTAGTTACAATTCA+AGG | 0.517855 | 1_4:+75513822 | None:intergenic |
| GTGTCTTCAAAGAATTCAGT+TGG | 0.517960 | 1_4:+75515001 | None:intergenic |
| AGATAGCAGAAGGAGGAGAA+GGG | 0.517972 | 1_4:-75523658 | Msa0185380:CDS |
| GAATTTGTGCAGACAAGACT+CGG | 0.520633 | 1_4:+75513856 | None:intergenic |
| AAAGGCCAGCAATTCAGAAA+AGG | 0.520870 | 1_4:+75516198 | None:intergenic |
| ATCTATATGGAAGAAGTTTG+TGG | 0.522152 | 1_4:-75516513 | Msa0185380:CDS |
| GACAGAACGAAGATGGTGGA+TGG | 0.523858 | 1_4:-75517036 | Msa0185380:intron |
| TCTATATGGAAGAAGTTTGT+GGG | 0.523992 | 1_4:-75516512 | Msa0185380:CDS |
| ATATCTTGAATCATAGGATG+TGG | 0.524227 | 1_4:+75516252 | None:intergenic |
| TTCAAGCTCATGATGGCCAC+TGG | 0.530366 | 1_4:-75518768 | Msa0185380:CDS |
| GTCTCTGACTGCACCGCAGA+AGG | 0.530369 | 1_4:-75515401 | Msa0185380:CDS |
| CTACACTAATTACCTGTTGT+GGG | 0.532832 | 1_4:+75514058 | None:intergenic |
| ACAGAACGAAGATGGTGGAT+GGG | 0.533685 | 1_4:-75517035 | Msa0185380:intron |
| GCTACACTAATTACCTGTTG+TGG | 0.534062 | 1_4:+75514057 | None:intergenic |
| TATATTGCACTGAGGCTGCT+TGG | 0.534774 | 1_4:-75516965 | Msa0185380:CDS |
| AAATCAACTGGAACAAAGCC+CGG | 0.537569 | 1_4:-75516430 | Msa0185380:CDS |
| TCGATATGATGAGTAGTTCA+GGG | 0.538351 | 1_4:+75513917 | None:intergenic |
| TTTGCAAGGAAGGACTGTTA+CGG | 0.538358 | 1_4:+75514491 | None:intergenic |
| AACTTCATTCCACGGTGTAT+GGG | 0.539799 | 1_4:+75514114 | None:intergenic |
| AAGAACATGCTGAGATTGAA+AGG | 0.540342 | 1_4:-75523568 | Msa0185380:CDS |
| TACTCTCCCAGAGCCCATAT+GGG | 0.543860 | 1_4:+75513885 | None:intergenic |
| TGTTGTCCCTTATCGGTGCA+GGG | 0.544685 | 1_4:-75514264 | Msa0185380:CDS |
| AGATAACAGGAGTATTTATG+AGG | 0.545080 | 1_4:-75513947 | Msa0185380:CDS |
| GTTAATAATCAATTCACAGA+TGG | 0.545863 | 1_4:-75514094 | Msa0185380:CDS |
| TGTAACGTGAGTGAAGAGTA+TGG | 0.547729 | 1_4:-75515560 | Msa0185380:CDS |
| TGACTTCCTGAAGGCCTCAC+AGG | 0.548212 | 1_4:-75515516 | Msa0185380:CDS |
| TGGGGATTTCTTTATCATGT+GGG | 0.548896 | 1_4:-75516225 | Msa0185380:CDS |
| GCACTGAGGCTGCTTGGAGA+AGG | 0.550449 | 1_4:-75516959 | Msa0185380:CDS |
| CTTGGAGAAGGACCTGAAGA+TGG | 0.550707 | 1_4:-75516947 | Msa0185380:CDS |
| AAATTTAGTTCAAACTTCGT+GGG | 0.551738 | 1_4:-75514290 | Msa0185380:CDS |
| AGCCCGGAATACTATTGCTA+AGG | 0.551892 | 1_4:-75516414 | Msa0185380:intron |
| TCTCAATGCATGACCAAGGT+TGG | 0.552996 | 1_4:-75515427 | Msa0185380:CDS |
| CAGAACGAAGATGGTGGATG+GGG | 0.555253 | 1_4:-75517034 | Msa0185380:CDS |
| AGAAGATGGCTTGAAAATCC+AGG | 0.558427 | 1_4:-75515986 | Msa0185380:intron |
| ATTTGATTAGGTCAGTGATA+GGG | 0.563688 | 1_4:+75516489 | None:intergenic |
| TGGAAGTTGAAGATAGCAGA+AGG | 0.564446 | 1_4:-75523668 | Msa0185380:CDS |
| TGATTATTAACTTCATTCCA+CGG | 0.564716 | 1_4:+75514106 | None:intergenic |
| AAAGGGCCAGCAGATTCTGC+AGG | 0.566025 | 1_4:+75518745 | None:intergenic |
| TCCTCAATTCAAGCTCATGA+TGG | 0.566026 | 1_4:-75518775 | Msa0185380:CDS |
| CAGGTAGTTGAAAATCCATC+CGG | 0.568896 | 1_4:-75515497 | Msa0185380:CDS |
| AAGTTTGAACTAAATTTGCA+CGG | 0.573160 | 1_4:+75514296 | None:intergenic |
| ATTCCACGGTGTATGGGTGT+AGG | 0.573394 | 1_4:+75514120 | None:intergenic |
| GTACATTGCTTTGAACTCAC+CGG | 0.573832 | 1_4:+75515478 | None:intergenic |
| TGGATGGGGATTCCATATAG+AGG | 0.575350 | 1_4:-75517020 | Msa0185380:CDS |
| TGACCTCTTGATGAGAATGC+AGG | 0.575657 | 1_4:-75523498 | Msa0185380:intron |
| TTCTGTCTAAGCTTGGTGAA+AGG | 0.576271 | 1_4:+75516180 | None:intergenic |
| GCCATCATGAGCTTGAATTG+AGG | 0.576423 | 1_4:+75518774 | None:intergenic |
| ATTGATTACAACAATAAGAA+GGG | 0.576445 | 1_4:-75518812 | Msa0185380:CDS |
| CTTCATAGGACGTCAACACT+GGG | 0.580277 | 1_4:-75523618 | Msa0185380:CDS |
| TATTATGTTTGATAGCGCGT+TGG | 0.580947 | 1_4:-75516077 | Msa0185380:CDS |
| TGAAACACACAAAACCCTGA+TGG | 0.581560 | 1_4:-75514736 | Msa0185380:CDS |
| AGATGGTGAAGACAAGGCAA+TGG | 0.581885 | 1_4:-75516930 | Msa0185380:CDS |
| TGGGAATTTGATCCAAATGC+AGG | 0.583989 | 1_4:-75523599 | Msa0185380:CDS |
| GTGTACAACCAATTAGCACC+TGG | 0.583999 | 1_4:+75513798 | None:intergenic |
| CAAGGGATCCTGTAACATAG+AGG | 0.586621 | 1_4:+75518488 | None:intergenic |
| ATACCTGCATTCTCATCAAG+AGG | 0.587025 | 1_4:+75523495 | None:intergenic |
| TCATGTGCTTTCCGAAGTGT+AGG | 0.587144 | 1_4:+75515536 | None:intergenic |
| TTTCACCAAGCTTAGACAGA+AGG | 0.587774 | 1_4:-75516178 | Msa0185380:CDS |
| TCTTTCTTCAAGAATATCAT+CGG | 0.588040 | 1_4:-75513677 | Msa0185380:three_prime_UTR |
| ATTGCTTTGAACTCACCGGA+TGG | 0.590740 | 1_4:+75515482 | None:intergenic |
| GTCAAAGCAGCTTCCTAATG+GGG | 0.591159 | 1_4:-75514449 | Msa0185380:CDS |
| GGTAGAAACCAGAATTCTGG+TGG | 0.591415 | 1_4:+75516701 | None:intergenic |
| GAGGTCCTAGAACCTCATCA+AGG | 0.592674 | 1_4:+75518470 | None:intergenic |
| CCACTAAACCACCATGGTCA+AGG | 0.595228 | 1_4:+75516888 | None:intergenic |
| TTGCATTGGAAGTGTAGAGA+AGG | 0.596365 | 1_4:-75516100 | Msa0185380:CDS |
| CTGCAAGCCAGAAGTAATCA+GGG | 0.596867 | 1_4:+75516007 | None:intergenic |
| ATGATTCAAGATATGTTATG+GGG | 0.597243 | 1_4:-75516243 | Msa0185380:CDS |
| ACCTGAAGATGGTGAAGACA+AGG | 0.599140 | 1_4:-75516936 | Msa0185380:CDS |
| AAGAGTATGGTCCTACACTT+CGG | 0.599344 | 1_4:-75515547 | Msa0185380:CDS |
| CAGCAGATTCTGCAGGCCAG+TGG | 0.600116 | 1_4:+75518752 | None:intergenic |
| CTGCACCGCAGAAGGACTCA+AGG | 0.601671 | 1_4:-75515393 | Msa0185380:intron |
| ATGGGGAAAGTTCTGGGTCA+CGG | 0.605144 | 1_4:-75516855 | Msa0185380:intron |
| GTTTAACTGCTGGTGGAATG+GGG | 0.606958 | 1_4:+75518866 | None:intergenic |
| AGTCAGAGACTTGCCAACCT+TGG | 0.608423 | 1_4:+75515414 | None:intergenic |
| TCGGTATTTATATAATCACC+AGG | 0.608586 | 1_4:-75518428 | Msa0185380:intron |
| ACACCCAACTCATAGAGCTA+AGG | 0.609087 | 1_4:-75514796 | Msa0185380:CDS |
| TCTCTACACTTCCAATGCAA+AGG | 0.614361 | 1_4:+75516103 | None:intergenic |
| CTTGGAGTTTATGAGTGGCG+AGG | 0.615223 | 1_4:-75516737 | Msa0185380:CDS |
| TCAAAGCAGCTTCCTAATGG+GGG | 0.615650 | 1_4:-75514448 | Msa0185380:CDS |
| AAGGGATCCTGTAACATAGA+GGG | 0.615864 | 1_4:+75518489 | None:intergenic |
| GGAAAATGTTGTGCTACTGT+CGG | 0.617544 | 1_4:-75516558 | Msa0185380:CDS |
| TGAAGACACACTGATTGAGA+GGG | 0.617821 | 1_4:-75514987 | Msa0185380:CDS |
| TTATTTGTCAAGCCAAAACA+AGG | 0.619533 | 1_4:-75514413 | Msa0185380:intron |
| ATGAGGTGACAGAACGAAGA+TGG | 0.622105 | 1_4:-75517043 | Msa0185380:intron |
| AATTAATCATGTGCGTTACG+AGG | 0.622234 | 1_4:-75516142 | Msa0185380:CDS |
| GACACATATGCAAAGGATCG+TGG | 0.624587 | 1_4:-75515454 | Msa0185380:CDS |
| GAAAGCACATGACTTCCTGA+AGG | 0.625323 | 1_4:-75515525 | Msa0185380:CDS |
| GAGCTTTGGGTGTCAAATGT+GGG | 0.627157 | 1_4:-75515615 | Msa0185380:CDS |
| TATCTTGAATCATAGGATGT+GGG | 0.628079 | 1_4:+75516253 | None:intergenic |
| GAGAAGAAGATATCATAACA+GGG | 0.628365 | 1_4:-75518840 | Msa0185380:CDS |
| GTAGAGGGACTAACAACTTG+TGG | 0.629594 | 1_4:-75514523 | Msa0185380:intron |
| AGGTACTTGGAGTTTATGAG+TGG | 0.631997 | 1_4:-75516742 | Msa0185380:CDS |
| AAGTTGAAGATAGCAGAAGG+AGG | 0.632969 | 1_4:-75523665 | Msa0185380:CDS |
| AGAGCTTTGGGTGTCAAATG+TGG | 0.632997 | 1_4:-75515616 | Msa0185380:CDS |
| TCTTCCATATAGATATGACA+TGG | 0.638060 | 1_4:+75516522 | None:intergenic |
| AGGTCCTAGAACCTCATCAA+GGG | 0.639948 | 1_4:+75518471 | None:intergenic |
| ATGTACAGACACATATGCAA+AGG | 0.641280 | 1_4:-75515461 | Msa0185380:CDS |
| TAAAACCTTGAGTCCTTCTG+CGG | 0.644286 | 1_4:+75515388 | None:intergenic |
| TGTTACAGGATCCCTTGATG+AGG | 0.647790 | 1_4:-75518482 | Msa0185380:CDS |
| TCGCTACAGAGCAGTAATGG+CGG | 0.652702 | 1_4:-75515179 | Msa0185380:CDS |
| CATTACTGCTCTGTAGCGAG+AGG | 0.654544 | 1_4:+75515183 | None:intergenic |
| TAGAATACCAGGATCCATCA+GGG | 0.660292 | 1_4:+75514722 | None:intergenic |
| TTAGTGGCTATTCCATCATG+GGG | 0.661744 | 1_4:-75516872 | Msa0185380:CDS |
| CAAAGCAGCTTCCTAATGGG+GGG | 0.662526 | 1_4:-75514447 | Msa0185380:CDS |
| AATTGGATCCTTGACCATGG+TGG | 0.663800 | 1_4:-75516896 | Msa0185380:CDS |
| GGATGGGGATTCCATATAGA+GGG | 0.664160 | 1_4:-75517019 | Msa0185380:CDS |
| AGGTGACAGAACGAAGATGG+TGG | 0.664546 | 1_4:-75517040 | Msa0185380:intron |
| TGTACAACCAATTAGCACCT+GGG | 0.664652 | 1_4:+75513799 | None:intergenic |
| CTTCCATATAGATATGACAT+GGG | 0.667557 | 1_4:+75516523 | None:intergenic |
| AGAAGAAGATATCATAACAG+GGG | 0.679958 | 1_4:-75518839 | Msa0185380:CDS |
| TAGCTTTGTGAAGAGATACA+GGG | 0.686063 | 1_4:+75514818 | None:intergenic |
| GGTTGAAGACCCGAACTCAG+AGG | 0.694258 | 1_4:-75516055 | Msa0185380:CDS |
| ACATTCTCAATGCATGACCA+AGG | 0.704194 | 1_4:-75515431 | Msa0185380:CDS |
| ATTGTAACTACTCACTACCC+AGG | 0.711259 | 1_4:-75513816 | Msa0185380:three_prime_UTR |
| GAATAGCCACTAAACCACCA+TGG | 0.737768 | 1_4:+75516882 | None:intergenic |
| AGAAATTGGATCCTTGACCA+TGG | 0.742771 | 1_4:-75516899 | Msa0185380:CDS |
| GATCCTACACCCATACACCG+TGG | 0.761975 | 1_4:-75514123 | Msa0185380:CDS |
| CATTGAGCTATATTGCACTG+AGG | 0.768445 | 1_4:-75516973 | Msa0185380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTAACTTTATTTTACT+CGG | + | chr1_4:75515146-75515165 | None:intergenic | 10.0% |
| !! | TTTAATGTAACATTAATTAT+TGG | - | chr1_4:75515375-75515394 | Msa0185380:intron | 10.0% |
| !!! | AACTATTAGATTTTAAAATA+GGG | + | chr1_4:75515489-75515508 | None:intergenic | 10.0% |
| !!! | AAACTATTAGATTTTAAAAT+AGG | + | chr1_4:75515490-75515509 | None:intergenic | 10.0% |
| !!! | ATTTTAAAATCTAATAGTTT+TGG | - | chr1_4:75515490-75515509 | Msa0185380:CDS | 10.0% |
| !! | ACAAAATTATAGATATTTAT+AGG | - | chr1_4:75515925-75515944 | Msa0185380:intron | 10.0% |
| !!! | TATTTCGTTTTATTTTATTT+CGG | - | chr1_4:75516508-75516527 | Msa0185380:CDS | 10.0% |
| !!! | TATTTCGTTTTATTTTATTT+CGG | + | chr1_4:75516508-75516527 | None:intergenic | 10.0% |
| !!! | GTTAGAAAAAATTTATTTTA+TGG | + | chr1_4:75517391-75517410 | None:intergenic | 10.0% |
| !!! | TTATAAAAACTAGTTTTTTT+AGG | - | chr1_4:75518280-75518299 | Msa0185380:intron | 10.0% |
| !! | ATATATATGTTGAGATAATT+TGG | + | chr1_4:75513642-75513661 | None:intergenic | 15.0% |
| !! | ACTTGAAATTATATATCTAT+AGG | + | chr1_4:75513939-75513958 | None:intergenic | 15.0% |
| !!! | ATAAATGCTTTTTTTTTTGT+CGG | + | chr1_4:75514299-75514318 | None:intergenic | 15.0% |
| !!! | AAGAGCAATTTTATTTTTTT+TGG | - | chr1_4:75514689-75514708 | Msa0185380:intron | 15.0% |
| !!! | AAGTGAATAAATTTTTTGTA+GGG | + | chr1_4:75514954-75514973 | None:intergenic | 15.0% |
| !!! | AAAGTGAATAAATTTTTTGT+AGG | + | chr1_4:75514955-75514974 | None:intergenic | 15.0% |
| !!! | TATTATTTGCATTTTTTTAC+CGG | - | chr1_4:75514979-75514998 | Msa0185380:intron | 15.0% |
| !! | ATAAAATGCAAATATAATTC+CGG | + | chr1_4:75515001-75515020 | None:intergenic | 15.0% |
| !!! | TGAAAACTTTTTACAAAAAA+TGG | + | chr1_4:75515051-75515070 | None:intergenic | 15.0% |
| !! | TTAAGTCTATTGAAAAAAAA+AGG | + | chr1_4:75515420-75515439 | None:intergenic | 15.0% |
| !!! | ACCATATTTTAATCATTTTA+TGG | - | chr1_4:75515454-75515473 | Msa0185380:CDS | 15.0% |
| !! | TCCATAAAATGATTAAAATA+TGG | + | chr1_4:75515458-75515477 | None:intergenic | 15.0% |
| !!! | ACTATTAGATTTTAAAATAG+GGG | + | chr1_4:75515488-75515507 | None:intergenic | 15.0% |
| !!! | ATTAACCATTTAAAATTTGA+CGG | + | chr1_4:75515691-75515710 | None:intergenic | 15.0% |
| !! | TAAATGGTTAATTAAGTAAA+TGG | - | chr1_4:75515699-75515718 | Msa0185380:intron | 15.0% |
| !!! | AATGTTGATAGAAAATTTTA+CGG | - | chr1_4:75515833-75515852 | Msa0185380:intron | 15.0% |
| !!! | GATCACTATATTTTAAAATT+CGG | + | chr1_4:75515969-75515988 | None:intergenic | 15.0% |
| !!! | ACTATAGTTTTACATTTTTT+AGG | + | chr1_4:75515996-75516015 | None:intergenic | 15.0% |
| !!! | TCTAATTGTTTATACTTTTT+TGG | + | chr1_4:75516021-75516040 | None:intergenic | 15.0% |
| !! | AAAGTATAAACAATTAGAAT+AGG | - | chr1_4:75516023-75516042 | Msa0185380:CDS | 15.0% |
| !! | GTTTAGTTATAGAAAAAATT+TGG | - | chr1_4:75517741-75517760 | Msa0185380:intron | 15.0% |
| !!! | ATCTTTTTATATACGATTAA+AGG | - | chr1_4:75517965-75517984 | Msa0185380:intron | 15.0% |
| !!! | AAAAAAAGTATTTTACTACA+AGG | + | chr1_4:75518340-75518359 | None:intergenic | 15.0% |
| !! | TTTATACAAAAGAGAAAATT+TGG | - | chr1_4:75518705-75518724 | Msa0185380:intron | 15.0% |
| !!! | AGTTATTTGTTTTTTTTTCA+GGG | + | chr1_4:75519041-75519060 | None:intergenic | 15.0% |
| !! | ATATAAGTATATATATAGCA+AGG | + | chr1_4:75519280-75519299 | None:intergenic | 15.0% |
| !! | GTTATTACTGAATAATAAAA+TGG | + | chr1_4:75520051-75520070 | None:intergenic | 15.0% |
| !! | AAGATATAGATAATATAGAT+TGG | + | chr1_4:75520993-75521012 | None:intergenic | 15.0% |
| !! | ATAAAAATACAATATTAACC+TGG | + | chr1_4:75521399-75521418 | None:intergenic | 15.0% |
| !! | TAAATATGATTAGTATCTTT+AGG | - | chr1_4:75521471-75521490 | Msa0185380:intron | 15.0% |
| !! | AAAATCTGATTCTATTATAT+GGG | + | chr1_4:75521609-75521628 | None:intergenic | 15.0% |
| !!! | TAAATGTTAACTATTTTTGT+AGG | - | chr1_4:75522018-75522037 | Msa0185380:intron | 15.0% |
| !!! | ATAATATATATACCTTGTTT+TGG | + | chr1_4:75522966-75522985 | None:intergenic | 15.0% |
| !!! | TTTTCCTTGTTAATTTAAAT+AGG | - | chr1_4:75523023-75523042 | Msa0185380:intron | 15.0% |
| !! | TATACCTATTTAAATTAACA+AGG | + | chr1_4:75523030-75523049 | None:intergenic | 15.0% |
| !! | AGAATAGTATATAAAATTGA+TGG | + | chr1_4:75523345-75523364 | None:intergenic | 15.0% |
| !!! | TAAATGCTTTTTTTTTTGTC+GGG | + | chr1_4:75514298-75514317 | None:intergenic | 20.0% |
| !!! | TTAGCTTGTTTTTACTTATT+TGG | + | chr1_4:75514470-75514489 | None:intergenic | 20.0% |
| !!! | AGCAATTTTATTTTTTTTGG+TGG | - | chr1_4:75514692-75514711 | Msa0185380:intron | 20.0% |
| !!! | AATTTTATTTTTTTTGGTGG+TGG | - | chr1_4:75514695-75514714 | Msa0185380:intron | 20.0% |
| !! | ATATCTGCAATTAAATGAAT+TGG | + | chr1_4:75515229-75515248 | None:intergenic | 20.0% |
| !! | TGTAATTTACCTTAAATTTC+AGG | - | chr1_4:75515255-75515274 | Msa0185380:CDS | 20.0% |
| !! | AGATAATAACCTGAAATTTA+AGG | + | chr1_4:75515267-75515286 | None:intergenic | 20.0% |
| !!! | TTTCTAAATACTTGTACTTT+TGG | - | chr1_4:75515314-75515333 | Msa0185380:intron | 20.0% |
| !!! | AATAGACTTAATTGCAATTT+TGG | - | chr1_4:75515429-75515448 | Msa0185380:CDS | 20.0% |
| !!! | CTATTAGATTTTAAAATAGG+GGG | + | chr1_4:75515487-75515506 | None:intergenic | 20.0% |
| !!! | TAAAACCGTCAAATTTTAAA+TGG | - | chr1_4:75515683-75515702 | Msa0185380:intron | 20.0% |
| !!! | ATGTTGATAGAAAATTTTAC+GGG | - | chr1_4:75515834-75515853 | Msa0185380:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr1_4:75515894-75515913 | Msa0185380:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr1_4:75515895-75515914 | Msa0185380:intron | 20.0% |
| !! | AATTAACCATAAATCACTAA+AGG | + | chr1_4:75516232-75516251 | None:intergenic | 20.0% |
| !!! | AACATCTTGTTTTTATTGAA+AGG | - | chr1_4:75516358-75516377 | Msa0185380:intron | 20.0% |
| !! | TTTATTGAAAGGATTAGATT+AGG | - | chr1_4:75516369-75516388 | Msa0185380:intron | 20.0% |
| !! | TCTAGAAAATTACTAAGATT+TGG | + | chr1_4:75517046-75517065 | None:intergenic | 20.0% |
| !! | TCTAGAAAATTACTAAGATT+TGG | - | chr1_4:75517046-75517065 | Msa0185380:intron | 20.0% |
| !! | TTGCTTTCATTTACTTATTT+CGG | - | chr1_4:75517193-75517212 | Msa0185380:intron | 20.0% |
| !!! | TTTTCTAACCAAAAGTAATT+AGG | - | chr1_4:75517402-75517421 | Msa0185380:intron | 20.0% |
| !! | AAAACACTTCATAGTATATT+TGG | + | chr1_4:75517579-75517598 | None:intergenic | 20.0% |
| !!! | AATTTGGTGTACATTTTATA+TGG | - | chr1_4:75517757-75517776 | Msa0185380:intron | 20.0% |
| !! | GATGTAATTAATGTGATAAA+TGG | - | chr1_4:75517803-75517822 | Msa0185380:intron | 20.0% |
| !! | ATTAATATAACAGTTGTCAT+TGG | - | chr1_4:75518122-75518141 | Msa0185380:intron | 20.0% |
| !! | ATTGATTACAACAATAAGAA+GGG | - | chr1_4:75518552-75518571 | Msa0185380:intron | 20.0% |
| !!! | TCTTTTGTATAAAGATCAAA+GGG | + | chr1_4:75518698-75518717 | None:intergenic | 20.0% |
| !!! | TTTTATATATAAGAAAAGGC+TGG | + | chr1_4:75518766-75518785 | None:intergenic | 20.0% |
| !!! | CCAGTTTTATATATAAGAAA+AGG | + | chr1_4:75518770-75518789 | None:intergenic | 20.0% |
| !!! | CCTTTTCTTATATATAAAAC+TGG | - | chr1_4:75518767-75518786 | Msa0185380:CDS | 20.0% |
| !!! | CAGTTATTTGTTTTTTTTTC+AGG | + | chr1_4:75519042-75519061 | None:intergenic | 20.0% |
| !!! | ACAATTATAGTTTTTTGAGA+GGG | + | chr1_4:75519148-75519167 | None:intergenic | 20.0% |
| !!! | AACAATTATAGTTTTTTGAG+AGG | + | chr1_4:75519149-75519168 | None:intergenic | 20.0% |
| !!! | TTCATCTTATTAGTTTTTCA+GGG | - | chr1_4:75519607-75519626 | Msa0185380:intron | 20.0% |
| !! | TCAAATGCAATTAAGAAAAA+GGG | + | chr1_4:75520115-75520134 | None:intergenic | 20.0% |
| !! | TTCAAATGCAATTAAGAAAA+AGG | + | chr1_4:75520116-75520135 | None:intergenic | 20.0% |
| !! | TAATACTTACTAGACAAAAA+GGG | + | chr1_4:75520188-75520207 | None:intergenic | 20.0% |
| !! | ATAATACTTACTAGACAAAA+AGG | + | chr1_4:75520189-75520208 | None:intergenic | 20.0% |
| !! | TCAAATTAAATATGCATTCA+GGG | - | chr1_4:75520785-75520804 | Msa0185380:intron | 20.0% |
| !! | TAGATATATGAAACTGAAAA+TGG | - | chr1_4:75521061-75521080 | Msa0185380:intron | 20.0% |
| !! | TATGATTCAAGATATGTTAT+GGG | - | chr1_4:75521120-75521139 | Msa0185380:intron | 20.0% |
| !! | AAAATTAAATGAAATGTTGC+AGG | + | chr1_4:75521440-75521459 | None:intergenic | 20.0% |
| !! | AAGCTAAAGAAATATAATCA+AGG | + | chr1_4:75521513-75521532 | None:intergenic | 20.0% |
| !! | TTGATTCTTTCTCTAATTAT+TGG | - | chr1_4:75521544-75521563 | Msa0185380:intron | 20.0% |
| !! | AAATCTGATTCTATTATATG+GGG | + | chr1_4:75521608-75521627 | None:intergenic | 20.0% |
| !! | GAAAATCTGATTCTATTATA+TGG | + | chr1_4:75521610-75521629 | None:intergenic | 20.0% |
| !! | TCCTTCAAAAAAAAAAATCA+TGG | - | chr1_4:75521673-75521692 | Msa0185380:intron | 20.0% |
| !!! | ACCATGATTTTTTTTTTTGA+AGG | + | chr1_4:75521677-75521696 | None:intergenic | 20.0% |
| !!! | TTAACAACTGTTAATTTTAG+TGG | + | chr1_4:75521711-75521730 | None:intergenic | 20.0% |
| !!! | TTTTTCAAAATATACATGCA+TGG | - | chr1_4:75522041-75522060 | Msa0185380:intron | 20.0% |
| !!! | GACTTTCTTTAATTTTTGTT+TGG | - | chr1_4:75522722-75522741 | Msa0185380:intron | 20.0% |
| !! | CATAATTTATAATTACCAAG+AGG | + | chr1_4:75523166-75523185 | None:intergenic | 20.0% |
| !!! | TGAATGTTTTTGTTACAAAA+AGG | - | chr1_4:75523210-75523229 | Msa0185380:intron | 20.0% |
| !! | TAGTATATAAAATTGATGGA+AGG | + | chr1_4:75523341-75523360 | None:intergenic | 20.0% |
| !! | AAATTAAAAAATGCAACTAC+AGG | - | chr1_4:75523394-75523413 | Msa0185380:intron | 20.0% |
| !!! | AGGTGTCGTTAATATTATTA+AGG | - | chr1_4:75513600-75513619 | Msa0185380:three_prime_UTR | 25.0% |
| ! | AGAGAATAAAGAAAAAGATG+TGG | - | chr1_4:75513676-75513695 | Msa0185380:three_prime_UTR | 25.0% |
| ! | ATTTCTGTGAATAACTTCAT+AGG | - | chr1_4:75513732-75513751 | Msa0185380:three_prime_UTR | 25.0% |
| !! | TTTGATGGAGAATCTATTTT+TGG | + | chr1_4:75513838-75513857 | None:intergenic | 25.0% |
| !!! | TCTGGATTTTCTAGTTATTT+AGG | + | chr1_4:75514029-75514048 | None:intergenic | 25.0% |
| ! | ACAATGCATTAATATATGCA+AGG | - | chr1_4:75514258-75514277 | Msa0185380:intron | 25.0% |
| !!! | AAATGCTTTTTTTTTTGTCG+GGG | + | chr1_4:75514297-75514316 | None:intergenic | 25.0% |
| ! | TAATCAAAGTAATTAGCTAG+TGG | - | chr1_4:75514345-75514364 | Msa0185380:intron | 25.0% |
| !!! | TTGTTTCTGTTTTGGATATA+GGG | + | chr1_4:75514824-75514843 | None:intergenic | 25.0% |
| !!! | TGTAAAAAGTTTTCAAGTCA+TGG | - | chr1_4:75515056-75515075 | Msa0185380:intron | 25.0% |
| ! | AATGTGATATATTTACCTGA+TGG | - | chr1_4:75515564-75515583 | Msa0185380:CDS | 25.0% |
| !!! | TGTTGATAGAAAATTTTACG+GGG | - | chr1_4:75515835-75515854 | Msa0185380:intron | 25.0% |
| !! | ACAAGATGTTAAGTGTTTTA+TGG | + | chr1_4:75516348-75516367 | None:intergenic | 25.0% |
| !!! | TTTTATTTTATTTCGGTCCA+CGG | - | chr1_4:75516515-75516534 | Msa0185380:CDS | 25.0% |
| !!! | AAACTTGTTCTTTTCTATCT+AGG | - | chr1_4:75516706-75516725 | Msa0185380:intron | 25.0% |
| !!! | AAACTTGTTCTTTTCTATCT+AGG | + | chr1_4:75516706-75516725 | None:intergenic | 25.0% |
| ! | ATATAACTTCTGTAACATCA+AGG | + | chr1_4:75517252-75517271 | None:intergenic | 25.0% |
| ! | AACACATATATCTAACTCTA+AGG | + | chr1_4:75517524-75517543 | None:intergenic | 25.0% |
| ! | AATTACATCATTCTCTCTTA+AGG | + | chr1_4:75517792-75517811 | None:intergenic | 25.0% |
| ! | AGAGAGAAATAGAGATAAAA+TGG | - | chr1_4:75517883-75517902 | Msa0185380:intron | 25.0% |
| ! | AATGGAATGTTGAATATATG+TGG | - | chr1_4:75517901-75517920 | Msa0185380:intron | 25.0% |
| ! | ATGGAATGTTGAATATATGT+GGG | - | chr1_4:75517902-75517921 | Msa0185380:intron | 25.0% |
| ! | TGAATTTATGGTTAAAGAGA+TGG | - | chr1_4:75518046-75518065 | Msa0185380:intron | 25.0% |
| !!! | ATTAGTTTTTTCTCTTTGTC+AGG | + | chr1_4:75518089-75518108 | None:intergenic | 25.0% |
| !! | TCCAATGTCATTTCTAAATA+TGG | - | chr1_4:75518427-75518446 | Msa0185380:intron | 25.0% |
| ! | ACCATATTTAGAAATGACAT+TGG | + | chr1_4:75518431-75518450 | None:intergenic | 25.0% |
| !! | CATTGATTACAACAATAAGA+AGG | - | chr1_4:75518551-75518570 | Msa0185380:intron | 25.0% |
| ! | ATGGTTGAACAAAAAACAAA+GGG | + | chr1_4:75518639-75518658 | None:intergenic | 25.0% |
| ! | AATGGTTGAACAAAAAACAA+AGG | + | chr1_4:75518640-75518659 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGTTCAACCAT+TGG | - | chr1_4:75518639-75518658 | Msa0185380:intron | 25.0% |
| ! | AGTTTCAATCGAATATCAAA+GGG | + | chr1_4:75518675-75518694 | None:intergenic | 25.0% |
| !! | CTCTTTTGTATAAAGATCAA+AGG | + | chr1_4:75518699-75518718 | None:intergenic | 25.0% |
| ! | ACTAATTACTATATGCATAC+AGG | - | chr1_4:75518846-75518865 | Msa0185380:CDS | 25.0% |
| ! | AACATAAGAAGGAAATTGTT+CGG | - | chr1_4:75518917-75518936 | Msa0185380:intron | 25.0% |
| ! | ATTTGATCTCAATTATTCTG+AGG | + | chr1_4:75519013-75519032 | None:intergenic | 25.0% |
| ! | TAACTGTAATCCTAACAAAT+TGG | - | chr1_4:75519056-75519075 | Msa0185380:intron | 25.0% |
| ! | AACTGTAATCCTAACAAATT+GGG | - | chr1_4:75519057-75519076 | Msa0185380:intron | 25.0% |
| !! | TATGATTATCCCAATTTGTT+AGG | + | chr1_4:75519069-75519088 | None:intergenic | 25.0% |
| ! | TTAACATAACTGAATGAGTT+AGG | - | chr1_4:75519092-75519111 | Msa0185380:intron | 25.0% |
| !!! | CAATTATAGTTTTTTGAGAG+GGG | + | chr1_4:75519147-75519166 | None:intergenic | 25.0% |
| ! | TATATATATAGCAAGGAGTA+GGG | + | chr1_4:75519273-75519292 | None:intergenic | 25.0% |
| ! | TATATATAAGCACTTCATTG+AGG | - | chr1_4:75519295-75519314 | Msa0185380:intron | 25.0% |
| ! | TTCATTGATACCATGTTATA+TGG | + | chr1_4:75519468-75519487 | None:intergenic | 25.0% |
| !!! | GTTCATCTTATTAGTTTTTC+AGG | - | chr1_4:75519606-75519625 | Msa0185380:intron | 25.0% |
| ! | AGTAATTGCTAAAAACTACA+AGG | - | chr1_4:75519645-75519664 | Msa0185380:intron | 25.0% |
| !! | AAGGATGTTTATTTAGGTTT+AGG | + | chr1_4:75519679-75519698 | None:intergenic | 25.0% |
| ! | AGTGTAAAGGATGTTTATTT+AGG | + | chr1_4:75519685-75519704 | None:intergenic | 25.0% |
| ! | CAATGTTTGAATTTGATGAA+TGG | - | chr1_4:75519820-75519839 | Msa0185380:intron | 25.0% |
| !!! | AATTTGATGAATGGTGTTAT+AGG | - | chr1_4:75519829-75519848 | Msa0185380:intron | 25.0% |
| ! | AATTAAATAGCACACTAACT+AGG | - | chr1_4:75519908-75519927 | Msa0185380:intron | 25.0% |
| !! | ACTAGGATCAATTTAAGTTT+AGG | - | chr1_4:75519925-75519944 | Msa0185380:intron | 25.0% |
| !!! | GGTGAAATAATCTTTTTTTG+CGG | - | chr1_4:75519986-75520005 | Msa0185380:intron | 25.0% |
| ! | AATAACTTATATGCGAATTG+TGG | - | chr1_4:75520065-75520084 | Msa0185380:intron | 25.0% |
| ! | CAAATGCAATTAAGAAAAAG+GGG | + | chr1_4:75520114-75520133 | None:intergenic | 25.0% |
| !!! | ATGCATATTTAATTTGACCA+AGG | + | chr1_4:75520782-75520801 | None:intergenic | 25.0% |
| ! | GTCAAATTAAATATGCATTC+AGG | - | chr1_4:75520784-75520803 | Msa0185380:intron | 25.0% |
| ! | CATAACATATCTTGAATCAT+AGG | + | chr1_4:75521121-75521140 | None:intergenic | 25.0% |
| ! | CTATGATTCAAGATATGTTA+TGG | - | chr1_4:75521119-75521138 | Msa0185380:intron | 25.0% |
| ! | ATGATTCAAGATATGTTATG+GGG | - | chr1_4:75521121-75521140 | Msa0185380:intron | 25.0% |
| ! | TTTATTCATTCAACCAACTA+AGG | - | chr1_4:75521414-75521433 | Msa0185380:intron | 25.0% |
| ! | GTGTTCATTGTGAAATTAAT+AGG | - | chr1_4:75522492-75522511 | Msa0185380:intron | 25.0% |
| ! | TTCAATGAAATGAATTGCTT+TGG | + | chr1_4:75522612-75522631 | None:intergenic | 25.0% |
| ! | GTTTAACACAATAGATCATT+AGG | + | chr1_4:75522698-75522717 | None:intergenic | 25.0% |
| ! | AAGTTTGAACTAAATTTGCA+CGG | + | chr1_4:75523071-75523090 | None:intergenic | 25.0% |
| !! | AAATTTAGTTCAAACTTCGT+GGG | - | chr1_4:75523074-75523093 | Msa0185380:intron | 25.0% |
| ! | TGATTATTAACTTCATTCCA+CGG | + | chr1_4:75523261-75523280 | None:intergenic | 25.0% |
| ! | GTTAATAATCAATTCACAGA+TGG | - | chr1_4:75523270-75523289 | Msa0185380:intron | 25.0% |
| !! | TTTCCGAATTTTGTATTTTC+TGG | - | chr1_4:75523622-75523641 | Msa0185380:CDS | 25.0% |
| ! | TTTGTAAAAAAACTGTCGAT+TGG | - | chr1_4:75523648-75523667 | Msa0185380:CDS | 25.0% |
| ! | TCTTTCTTCAAGAATATCAT+CGG | - | chr1_4:75523687-75523706 | Msa0185380:exon | 25.0% |
| !! | TAACTTATTCCTTTTCAGAA+AGG | - | chr1_4:75523746-75523765 | Msa0185380:five_prime_UTR | 25.0% |
| !! | TATATATTGCCTTTCTGAAA+AGG | + | chr1_4:75523758-75523777 | None:intergenic | 25.0% |
| AGAAAATCCAGAGTTCAAAA+TGG | - | chr1_4:75514037-75514056 | Msa0185380:intron | 30.0% | |
| GAAAATCCAGAGTTCAAAAT+GGG | - | chr1_4:75514038-75514057 | Msa0185380:intron | 30.0% | |
| CATTAATATATGCAAGGTCT+GGG | - | chr1_4:75514264-75514283 | Msa0185380:CDS | 30.0% | |
| ATTAATATATGCAAGGTCTG+GGG | - | chr1_4:75514265-75514284 | Msa0185380:CDS | 30.0% | |
| !!! | GCTTGTTTTTACTTATTTGG+TGG | + | chr1_4:75514467-75514486 | None:intergenic | 30.0% |
| TTATCGTATGCTACTATCAT+AGG | + | chr1_4:75514511-75514530 | None:intergenic | 30.0% | |
| AAAATTGCTCTTCTTTCATC+TGG | + | chr1_4:75514681-75514700 | None:intergenic | 30.0% | |
| GACAATGCATTAAATATGCA+AGG | + | chr1_4:75514740-75514759 | None:intergenic | 30.0% | |
| !!! | GTTGTTTCTGTTTTGGATAT+AGG | + | chr1_4:75514825-75514844 | None:intergenic | 30.0% |
| !! | TGAAGGAGAACACTTTATTT+TGG | + | chr1_4:75515188-75515207 | None:intergenic | 30.0% |
| ! | GTTGATATTTTTCTACCATC+AGG | + | chr1_4:75515582-75515601 | None:intergenic | 30.0% |
| !!! | CTAAAAAGTGTGGTTTTGTA+AGG | + | chr1_4:75515757-75515776 | None:intergenic | 30.0% |
| TTTGGTCTCAAAATGTTTGA+AGG | + | chr1_4:75515781-75515800 | None:intergenic | 30.0% | |
| ! | AAAATTTCCGTCTGAAACTT+TGG | + | chr1_4:75515799-75515818 | None:intergenic | 30.0% |
| TATGTACTCATCTTAACGTA+CGG | + | chr1_4:75516063-75516082 | None:intergenic | 30.0% | |
| ! | AAAAAAGACCTGCATGTTTT+TGG | + | chr1_4:75516272-75516291 | None:intergenic | 30.0% |
| !!! | GTCTTTTTTCTCACCATTTT+TGG | - | chr1_4:75516283-75516302 | Msa0185380:intron | 30.0% |
| AGATTAGGTTTGAAGAATTG+TGG | - | chr1_4:75516384-75516403 | Msa0185380:intron | 30.0% | |
| !!! | TTTATTTTATTTCGGTCCAC+GGG | - | chr1_4:75516516-75516535 | Msa0185380:CDS | 30.0% |
| TAAAAGAAATAACAAACCCG+TGG | + | chr1_4:75516535-75516554 | None:intergenic | 30.0% | |
| CGACAAACCTATCAAAATAA+GGG | + | chr1_4:75516870-75516889 | None:intergenic | 30.0% | |
| CCAACAAACTTGTGAAAATA+GGG | + | chr1_4:75516840-75516859 | None:intergenic | 30.0% | |
| ACCAACAAACTTGTGAAAAT+AGG | + | chr1_4:75516839-75516858 | None:intergenic | 30.0% | |
| ACCAACAAACTTGTGAAAAT+AGG | - | chr1_4:75516839-75516858 | Msa0185380:intron | 30.0% | |
| CCAACAAACTTGTGAAAATA+GGG | - | chr1_4:75516840-75516859 | Msa0185380:intron | 30.0% | |
| CGACAAACCTATCAAAATAA+GGG | - | chr1_4:75516870-75516889 | Msa0185380:CDS | 30.0% | |
| CTACATAAGTTCTGCTTATA+TGG | - | chr1_4:75516964-75516983 | Msa0185380:CDS | 30.0% | |
| !!! | TTTTATTTTATTTCGGCCCA+CGG | + | chr1_4:75517007-75517026 | None:intergenic | 30.0% |
| CAACTTTCATTGCATTCATT+CGG | - | chr1_4:75517164-75517183 | Msa0185380:intron | 30.0% | |
| ! | GTCATAGTCCTAATTACTTT+TGG | + | chr1_4:75517413-75517432 | None:intergenic | 30.0% |
| ! | AAACCGTATTGGATACTTTT+GGG | + | chr1_4:75517448-75517467 | None:intergenic | 30.0% |
| ! | TAAACCGTATTGGATACTTT+TGG | + | chr1_4:75517449-75517468 | None:intergenic | 30.0% |
| ATGTGTTACGTTCATTTACT+TGG | - | chr1_4:75517537-75517556 | Msa0185380:intron | 30.0% | |
| TGGAATGTTGAATATATGTG+GGG | - | chr1_4:75517903-75517922 | Msa0185380:intron | 30.0% | |
| ATTTATGGTTAAAGAGATGG+AGG | - | chr1_4:75518049-75518068 | Msa0185380:intron | 30.0% | |
| ATATAACAGTTGTCATTGGA+AGG | - | chr1_4:75518126-75518145 | Msa0185380:intron | 30.0% | |
| AGAGAAGAAGATATCATAAC+AGG | - | chr1_4:75518523-75518542 | Msa0185380:intron | 30.0% | |
| GAGAAGAAGATATCATAACA+GGG | - | chr1_4:75518524-75518543 | Msa0185380:intron | 30.0% | |
| AGAAGAAGATATCATAACAG+GGG | - | chr1_4:75518525-75518544 | Msa0185380:intron | 30.0% | |
| GAGTTTCAATCGAATATCAA+AGG | + | chr1_4:75518676-75518695 | None:intergenic | 30.0% | |
| TACTATATGCATACAGGTAA+TGG | - | chr1_4:75518852-75518871 | Msa0185380:CDS | 30.0% | |
| ACAATTTCCTTCTTATGTTG+AGG | + | chr1_4:75518916-75518935 | None:intergenic | 30.0% | |
| TCGGTATTTATATAATCACC+AGG | - | chr1_4:75518936-75518955 | Msa0185380:intron | 30.0% | |
| TGCATGATTTACATAATACC+TGG | + | chr1_4:75518957-75518976 | None:intergenic | 30.0% | |
| ! | ACATTGTCTGAAGCAAAATA+GGG | + | chr1_4:75519238-75519257 | None:intergenic | 30.0% |
| ! | AACATTGTCTGAAGCAAAAT+AGG | + | chr1_4:75519239-75519258 | None:intergenic | 30.0% |
| ATATATATAGCAAGGAGTAG+GGG | + | chr1_4:75519272-75519291 | None:intergenic | 30.0% | |
| GTATATATATAGCAAGGAGT+AGG | + | chr1_4:75519274-75519293 | None:intergenic | 30.0% | |
| TGTCTATTGTTTAGTGAAGA+TGG | + | chr1_4:75519382-75519401 | None:intergenic | 30.0% | |
| ACTATCTCTTCCATATAACA+TGG | - | chr1_4:75519455-75519474 | Msa0185380:intron | 30.0% | |
| !!! | ATTAGTTTTTCAGGGAGAAT+AGG | - | chr1_4:75519615-75519634 | Msa0185380:intron | 30.0% |
| TTCTTTGTGATAGAGTGTAA+AGG | + | chr1_4:75519698-75519717 | None:intergenic | 30.0% | |
| !! | CACAAAGAAAGCATCATAAT+AGG | - | chr1_4:75519709-75519728 | Msa0185380:intron | 30.0% |
| CACAAACATTGCAAAACTTT+GGG | + | chr1_4:75519740-75519759 | None:intergenic | 30.0% | |
| TCACAAACATTGCAAAACTT+TGG | + | chr1_4:75519741-75519760 | None:intergenic | 30.0% | |
| AGGATTAAGCTAATTGTGTA+AGG | - | chr1_4:75519945-75519964 | Msa0185380:intron | 30.0% | |
| TAAGCTAATTGTGTAAGGTT+TGG | - | chr1_4:75519950-75519969 | Msa0185380:intron | 30.0% | |
| AATTAATGCAAGGAAGTCTT+AGG | + | chr1_4:75520141-75520160 | None:intergenic | 30.0% | |
| TCAACTCATCGATAAAATGA+TGG | - | chr1_4:75520220-75520239 | Msa0185380:intron | 30.0% | |
| TTGACAGTATATGACTTTCT+TGG | + | chr1_4:75520255-75520274 | None:intergenic | 30.0% | |
| TTTCAATACCATTTGTGATG+AGG | - | chr1_4:75520304-75520323 | Msa0185380:intron | 30.0% | |
| TAAGCAATCACGCTATATAT+AGG | - | chr1_4:75520602-75520621 | Msa0185380:intron | 30.0% | |
| ATGGTTGCATATAGAAGTTA+AGG | + | chr1_4:75520745-75520764 | None:intergenic | 30.0% | |
| CTTCCATATAGATATGACAT+GGG | + | chr1_4:75520844-75520863 | None:intergenic | 30.0% | |
| TCTTCCATATAGATATGACA+TGG | + | chr1_4:75520845-75520864 | None:intergenic | 30.0% | |
| ATCTATATGGAAGAAGTTTG+TGG | - | chr1_4:75520851-75520870 | Msa0185380:intron | 30.0% | |
| TCTATATGGAAGAAGTTTGT+GGG | - | chr1_4:75520852-75520871 | Msa0185380:intron | 30.0% | |
| ATTTGATTAGGTCAGTGATA+GGG | + | chr1_4:75520878-75520897 | None:intergenic | 30.0% | |
| AACCTTATGATCAAATCAAC+TGG | - | chr1_4:75520922-75520941 | Msa0185380:intron | 30.0% | |
| !! | TTCCAGTTGATTTGATCATA+AGG | + | chr1_4:75520927-75520946 | None:intergenic | 30.0% |
| AAACCTTAGCAATAGTATTC+CGG | + | chr1_4:75520956-75520975 | None:intergenic | 30.0% | |
| TATCTTGAATCATAGGATGT+GGG | + | chr1_4:75521114-75521133 | None:intergenic | 30.0% | |
| ATATCTTGAATCATAGGATG+TGG | + | chr1_4:75521115-75521134 | None:intergenic | 30.0% | |
| GAGAAAGAATCAACTAAGAA+AGG | + | chr1_4:75521537-75521556 | None:intergenic | 30.0% | |
| TCTAATTATTGGAACTGACT+AGG | - | chr1_4:75521555-75521574 | Msa0185380:intron | 30.0% | |
| TAATAATGAATGCAGAGCTT+TGG | - | chr1_4:75521735-75521754 | Msa0185380:intron | 30.0% | |
| AATAATGAATGCAGAGCTTT+GGG | - | chr1_4:75521736-75521755 | Msa0185380:intron | 30.0% | |
| ATATTCATGAAAACACATGC+AGG | - | chr1_4:75522073-75522092 | Msa0185380:intron | 30.0% | |
| TGATCTTGTTGGAGAAAAAT+TGG | - | chr1_4:75522124-75522143 | Msa0185380:intron | 30.0% | |
| ! | AACCAACTGTAAGAATTTTG+AGG | + | chr1_4:75522227-75522246 | None:intergenic | 30.0% |
| AAATTCTTACAGTTGGTTAG+AGG | - | chr1_4:75522229-75522248 | Msa0185380:intron | 30.0% | |
| !! | TGAAATGAATTGCTTTGGAA+AGG | + | chr1_4:75522607-75522626 | None:intergenic | 30.0% |
| TAACACAATAGATCATTAGG+TGG | + | chr1_4:75522695-75522714 | None:intergenic | 30.0% | |
| ! | AAATTGACAAGCTTTTTGCA+AGG | + | chr1_4:75522890-75522909 | None:intergenic | 30.0% |
| TTATTTGTCAAGCCAAAACA+AGG | - | chr1_4:75522951-75522970 | Msa0185380:intron | 30.0% | |
| ! | CAAATTTAGTTCAAACTTCG+TGG | - | chr1_4:75523073-75523092 | Msa0185380:intron | 30.0% |
| ATTTATAATTACCAAGAGGC+AGG | + | chr1_4:75523162-75523181 | None:intergenic | 30.0% | |
| !! | AGATAACAGGAGTATTTATG+AGG | - | chr1_4:75523417-75523436 | Msa0185380:intron | 30.0% |
| TAGTGAGTAGTTACAATTCA+AGG | + | chr1_4:75523545-75523564 | None:intergenic | 30.0% | |
| CTGCCAGAAAATACAAAATT+CGG | + | chr1_4:75523628-75523647 | None:intergenic | 30.0% | |
| AAGAACATGCTGAGATTGAA+AGG | - | chr1_4:75513796-75513815 | Msa0185380:three_prime_UTR | 35.0% | |
| ! | CATTTTTAACAAGTGCCCTT+AGG | + | chr1_4:75514083-75514102 | None:intergenic | 35.0% |
| GCATTAATATATGCAAGGTC+TGG | - | chr1_4:75514263-75514282 | Msa0185380:CDS | 35.0% | |
| AAGAGTCCTGTGATACAAAA+TGG | - | chr1_4:75514435-75514454 | Msa0185380:CDS | 35.0% | |
| ! | ATAGGCTTTTGTTAGATGAG+TGG | + | chr1_4:75514493-75514512 | None:intergenic | 35.0% |
| GGAAATGAGCAAAATCAGAT+GGG | + | chr1_4:75514544-75514563 | None:intergenic | 35.0% | |
| TGGAAATGAGCAAAATCAGA+TGG | + | chr1_4:75514545-75514564 | None:intergenic | 35.0% | |
| GTCAATTAACTCACGTTAAG+TGG | + | chr1_4:75514565-75514584 | None:intergenic | 35.0% | |
| !!! | TTATTTTTTTTGGTGGTGGC+CGG | - | chr1_4:75514699-75514718 | Msa0185380:intron | 35.0% |
| CATTAAATATGCAAGGTACG+AGG | + | chr1_4:75514733-75514752 | None:intergenic | 35.0% | |
| !!! | GTGTTGTGTTGTTTCTGTTT+TGG | + | chr1_4:75514832-75514851 | None:intergenic | 35.0% |
| ACACCAGACAGAATAAAAAG+CGG | - | chr1_4:75514848-75514867 | Msa0185380:CDS | 35.0% | |
| TGAATTGGATACCAAGTATG+AGG | + | chr1_4:75515214-75515233 | None:intergenic | 35.0% | |
| GTTTGAAGGACTAAAAAGTG+TGG | + | chr1_4:75515767-75515786 | None:intergenic | 35.0% | |
| ! | TTTGAGACCAAAGTTTCAGA+CGG | - | chr1_4:75515789-75515808 | Msa0185380:intron | 35.0% |
| CATAACTAGATTGCGTTACT+TGG | - | chr1_4:75516084-75516103 | Msa0185380:CDS | 35.0% | |
| TCTTTATCCTATGAAGTCGA+TGG | + | chr1_4:75516171-75516190 | None:intergenic | 35.0% | |
| ACACGATCTAGTTAATCTAG+GGG | + | chr1_4:75516209-75516228 | None:intergenic | 35.0% | |
| GACACGATCTAGTTAATCTA+GGG | + | chr1_4:75516210-75516229 | None:intergenic | 35.0% | |
| TCGTGTCCTTTAGTGATTTA+TGG | - | chr1_4:75516223-75516242 | Msa0185380:CDS | 35.0% | |
| ATCATTCTCCAAAAACATGC+AGG | - | chr1_4:75516261-75516280 | Msa0185380:CDS | 35.0% | |
| GTAACTTTACGTGCCAAAAA+TGG | + | chr1_4:75516299-75516318 | None:intergenic | 35.0% | |
| ATTGTGGAAGAGATATAGCA+AGG | - | chr1_4:75516400-75516419 | Msa0185380:intron | 35.0% | |
| TTGTGGAAGAGATATAGCAA+GGG | - | chr1_4:75516401-75516420 | Msa0185380:intron | 35.0% | |
| ! | AATCAAAAAGTGTGCCTCTT+AGG | + | chr1_4:75516941-75516960 | None:intergenic | 35.0% |
| ! | AGATTTTCTCTCAATTCTCG+TGG | - | chr1_4:75516616-75516635 | Msa0185380:intron | 35.0% |
| CCTATCAAAATAAGGGTTTC+CGG | + | chr1_4:75516877-75516896 | None:intergenic | 35.0% | |
| GCGACAAACCTATCAAAATA+AGG | + | chr1_4:75516869-75516888 | None:intergenic | 35.0% | |
| ! | CCCTATTTTCACAAGTTTGT+TGG | - | chr1_4:75516679-75516698 | Msa0185380:intron | 35.0% |
| ! | CCCTATTTTCACAAGTTTGT+TGG | + | chr1_4:75516679-75516698 | None:intergenic | 35.0% |
| GCGACAAACCTATCAAAATA+AGG | - | chr1_4:75516869-75516888 | Msa0185380:CDS | 35.0% | |
| !!! | CTGGAAACCCTTATTTTGAT+AGG | + | chr1_4:75516880-75516899 | None:intergenic | 35.0% |
| ! | AGATTTTCTCTCAATTCTGG+TGG | + | chr1_4:75516906-75516925 | None:intergenic | 35.0% |
| ! | TCGAGATTTTCTCTCAATTC+TGG | + | chr1_4:75516613-75516632 | None:intergenic | 35.0% |
| ! | AATCAAAAAGTGTGCCTCTT+AGG | - | chr1_4:75516941-75516960 | Msa0185380:CDS | 35.0% |
| TGAAAGAAATAACAAACCCG+TGG | - | chr1_4:75516987-75517006 | Msa0185380:CDS | 35.0% | |
| GAAAGAAATAACAAACCCGT+GGG | - | chr1_4:75516988-75517007 | Msa0185380:CDS | 35.0% | |
| !!! | TTTATTTTATTTCGGCCCAC+GGG | + | chr1_4:75517006-75517025 | None:intergenic | 35.0% |
| TAATAAAACCCTCTTGCATC+AGG | - | chr1_4:75517095-75517114 | Msa0185380:intron | 35.0% | |
| AATAAAACCCTCTTGCATCA+GGG | - | chr1_4:75517096-75517115 | Msa0185380:intron | 35.0% | |
| !! | GTTGAATTGATAGTGCAACA+TGG | + | chr1_4:75517148-75517167 | None:intergenic | 35.0% |
| TACTTATTTCGGTATCACAG+TGG | - | chr1_4:75517204-75517223 | Msa0185380:intron | 35.0% | |
| TAACTTCTGTAACATCAAGG+TGG | + | chr1_4:75517249-75517268 | None:intergenic | 35.0% | |
| !! | TACTTTTGGGAGTCTATTGT+GGG | + | chr1_4:75517435-75517454 | None:intergenic | 35.0% |
| !! | ATACTTTTGGGAGTCTATTG+TGG | + | chr1_4:75517436-75517455 | None:intergenic | 35.0% |
| !! | ACTCCCAAAAGTATCCAATA+CGG | - | chr1_4:75517442-75517461 | Msa0185380:intron | 35.0% |
| CCAAAAAGCTTAAACCGTAT+TGG | + | chr1_4:75517459-75517478 | None:intergenic | 35.0% | |
| ! | CCAATACGGTTTAAGCTTTT+TGG | - | chr1_4:75517456-75517475 | Msa0185380:intron | 35.0% |
| GGAATGTTGAATATATGTGG+GGG | - | chr1_4:75517904-75517923 | Msa0185380:intron | 35.0% | |
| TGAATATATGTGGGGGAAAA+TGG | - | chr1_4:75517911-75517930 | Msa0185380:intron | 35.0% | |
| GAATATATGTGGGGGAAAAT+GGG | - | chr1_4:75517912-75517931 | Msa0185380:intron | 35.0% | |
| ACCAAACACATTAGTATTCG+AGG | - | chr1_4:75518001-75518020 | Msa0185380:intron | 35.0% | |
| TCCTCGAATACTAATGTGTT+TGG | + | chr1_4:75518005-75518024 | None:intergenic | 35.0% | |
| AAACACATTAGTATTCGAGG+AGG | - | chr1_4:75518004-75518023 | Msa0185380:intron | 35.0% | |
| ! | TCTCAACTGGGTTGAATTTA+TGG | - | chr1_4:75518034-75518053 | Msa0185380:intron | 35.0% |
| ACAAATATCAATACGTCCAG+TGG | + | chr1_4:75518825-75518844 | None:intergenic | 35.0% | |
| CTATAATTGTTTGTCGACAC+TGG | - | chr1_4:75519158-75519177 | Msa0185380:intron | 35.0% | |
| ! | ATTGTCTGAAGCAAAATAGG+GGG | + | chr1_4:75519236-75519255 | None:intergenic | 35.0% |
| ! | CATTGTCTGAAGCAAAATAG+GGG | + | chr1_4:75519237-75519256 | None:intergenic | 35.0% |
| AACATCTTTGATTCTGAGCA+GGG | + | chr1_4:75519350-75519369 | None:intergenic | 35.0% | |
| TATCTATGTTACCGATGTGA+AGG | + | chr1_4:75519436-75519455 | None:intergenic | 35.0% | |
| ! | AACTATATGTGTTTCTGCCA+AGG | - | chr1_4:75519545-75519564 | Msa0185380:intron | 35.0% |
| ! | TGTCTTGAATTTTGAGCTGT+GGG | + | chr1_4:75519790-75519809 | None:intergenic | 35.0% |
| ! | ATGTCTTGAATTTTGAGCTG+TGG | + | chr1_4:75519791-75519810 | None:intergenic | 35.0% |
| ACTTATATGCGAATTGTGGT+CGG | - | chr1_4:75520069-75520088 | Msa0185380:intron | 35.0% | |
| CATGTGTGGAAATTAATGCA+AGG | + | chr1_4:75520151-75520170 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTGAATCATGTG+TGG | + | chr1_4:75520165-75520184 | None:intergenic | 35.0% |
| ! | CTCATCGATAAAATGATGGA+AGG | - | chr1_4:75520224-75520243 | Msa0185380:intron | 35.0% |
| TTTAGTGGCTATTCCATCAT+GGG | - | chr1_4:75520491-75520510 | Msa0185380:intron | 35.0% | |
| TCACGCTATATATAGGTACT+TGG | - | chr1_4:75520609-75520628 | Msa0185380:intron | 35.0% | |
| TTTGGTAGAAACCAGAATTC+TGG | + | chr1_4:75520669-75520688 | None:intergenic | 35.0% | |
| ACCTAGGTCCTACATTAATT+TGG | - | chr1_4:75520715-75520734 | Msa0185380:intron | 35.0% | |
| CCTAGGTCCTACATTAATTT+GGG | - | chr1_4:75520716-75520735 | Msa0185380:intron | 35.0% | |
| ! | CTAGGTCCTACATTAATTTG+GGG | - | chr1_4:75520717-75520736 | Msa0185380:intron | 35.0% |
| AAGGAACCCCAAATTAATGT+AGG | + | chr1_4:75520726-75520745 | None:intergenic | 35.0% | |
| ! | CAAGGCATTAGACAAGATAA+TGG | + | chr1_4:75520764-75520783 | None:intergenic | 35.0% |
| CATTATCTTGTCTAATGCCT+TGG | - | chr1_4:75520762-75520781 | Msa0185380:intron | 35.0% | |
| ATGCCCATGTCATATCTATA+TGG | - | chr1_4:75520838-75520857 | Msa0185380:intron | 35.0% | |
| GATTTGATTAGGTCAGTGAT+AGG | + | chr1_4:75520879-75520898 | None:intergenic | 35.0% | |
| CTTCTCTCAGTGATTTGATT+AGG | + | chr1_4:75520890-75520909 | None:intergenic | 35.0% | |
| AACCTTAGCAATAGTATTCC+GGG | + | chr1_4:75520955-75520974 | None:intergenic | 35.0% | |
| TGAAAATGGCATGCAATTTC+AGG | - | chr1_4:75521075-75521094 | Msa0185380:intron | 35.0% | |
| ATGGGGATTTCTTTATCATG+TGG | - | chr1_4:75521138-75521157 | Msa0185380:intron | 35.0% | |
| TGGGGATTTCTTTATCATGT+GGG | - | chr1_4:75521139-75521158 | Msa0185380:intron | 35.0% | |
| AATTAATCATGTGCGTTACG+AGG | - | chr1_4:75521222-75521241 | Msa0185380:intron | 35.0% | |
| AACAGTAGATACCTTTGCAT+TGG | - | chr1_4:75521250-75521269 | Msa0185380:intron | 35.0% | |
| !! | TATTATGTTTGATAGCGCGT+TGG | - | chr1_4:75521287-75521306 | Msa0185380:intron | 35.0% |
| !! | ATTATGTTTGATAGCGCGTT+GGG | - | chr1_4:75521288-75521307 | Msa0185380:intron | 35.0% |
| ATGTACAGACACATATGCAA+AGG | - | chr1_4:75521903-75521922 | Msa0185380:intron | 35.0% | |
| AAAATGCCAACTGATCTTGT+TGG | - | chr1_4:75522113-75522132 | Msa0185380:intron | 35.0% | |
| ! | TTTTCTCCAACAAGATCAGT+TGG | + | chr1_4:75522122-75522141 | None:intergenic | 35.0% |
| AGCCTCAAAATTCTTACAGT+TGG | - | chr1_4:75522222-75522241 | Msa0185380:intron | 35.0% | |
| CATGCATGCATAGAATTAGT+TGG | + | chr1_4:75522324-75522343 | None:intergenic | 35.0% | |
| GTGTCTTCAAAGAATTCAGT+TGG | + | chr1_4:75522366-75522385 | None:intergenic | 35.0% | |
| !! | TAGCTTTGTGAAGAGATACA+GGG | + | chr1_4:75522549-75522568 | None:intergenic | 35.0% |
| !! | TTTCCTTAGCTCTATGAGTT+GGG | + | chr1_4:75522574-75522593 | None:intergenic | 35.0% |
| !! | ATTTCCTTAGCTCTATGAGT+TGG | + | chr1_4:75522575-75522594 | None:intergenic | 35.0% |
| AGAGTAGAAGATAGAATACC+AGG | + | chr1_4:75522656-75522675 | None:intergenic | 35.0% | |
| ATCAATTCACAGATGGAAGA+TGG | - | chr1_4:75523277-75523296 | Msa0185380:intron | 35.0% | |
| CTACACTAATTACCTGTTGT+GGG | + | chr1_4:75523309-75523328 | None:intergenic | 35.0% | |
| TCGATATGATGAGTAGTTCA+GGG | + | chr1_4:75523450-75523469 | None:intergenic | 35.0% | |
| TTCGATATGATGAGTAGTTC+AGG | + | chr1_4:75523451-75523470 | None:intergenic | 35.0% | |
| ATCGAAACATCTTTCCCATA+TGG | - | chr1_4:75523465-75523484 | Msa0185380:intron | 35.0% | |
| TCGAAACATCTTTCCCATAT+GGG | - | chr1_4:75523466-75523485 | Msa0185380:intron | 35.0% | |
| TGGAAGTTGAAGATAGCAGA+AGG | - | chr1_4:75513696-75513715 | Msa0185380:three_prime_UTR | 40.0% | |
| AAGTTGAAGATAGCAGAAGG+AGG | - | chr1_4:75513699-75513718 | Msa0185380:three_prime_UTR | 40.0% | |
| TGGGAATTTGATCCAAATGC+AGG | - | chr1_4:75513765-75513784 | Msa0185380:three_prime_UTR | 40.0% | |
| TCAATCTCAGCATGTTCTTG+TGG | + | chr1_4:75513795-75513814 | None:intergenic | 40.0% | |
| ! | GAGGTCAGAACTTTGTTTGA+TGG | + | chr1_4:75513853-75513872 | None:intergenic | 40.0% |
| ATACCTGCATTCTCATCAAG+AGG | + | chr1_4:75513872-75513891 | None:intergenic | 40.0% | |
| ! | GCATAACCCATTTTGAACTC+TGG | + | chr1_4:75514047-75514066 | None:intergenic | 40.0% |
| TGCTATCAAGAGATGACCTA+AGG | - | chr1_4:75514064-75514083 | Msa0185380:intron | 40.0% | |
| GCTATCAAGAGATGACCTAA+GGG | - | chr1_4:75514065-75514084 | Msa0185380:intron | 40.0% | |
| !! | TCTGCTCTCATTGAGTTGAT+TGG | + | chr1_4:75514407-75514426 | None:intergenic | 40.0% |
| ATCAACTCAATGAGAGCAGA+CGG | - | chr1_4:75514407-75514426 | Msa0185380:intron | 40.0% | |
| !!! | CTTCTGCCATTTTGTATCAC+AGG | + | chr1_4:75514444-75514463 | None:intergenic | 40.0% |
| !! | CTCATGCTCAGCTATTTTGA+TGG | - | chr1_4:75514643-75514662 | Msa0185380:intron | 40.0% |
| !!! | TATTTTTTTTGGTGGTGGCC+GGG | - | chr1_4:75514700-75514719 | Msa0185380:intron | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | + | chr1_4:75514762-75514781 | None:intergenic | 40.0% |
| TTCACAAGCCACTGTTATGT+AGG | + | chr1_4:75514874-75514893 | None:intergenic | 40.0% | |
| TACCAAGTATGAGGCAATGA+AGG | + | chr1_4:75515205-75515224 | None:intergenic | 40.0% | |
| ACGGGGACTTAAAATGCTAA+CGG | - | chr1_4:75515852-75515871 | Msa0185380:intron | 40.0% | |
| CATCTTAACGTACGGTATTG+AGG | + | chr1_4:75516055-75516074 | None:intergenic | 40.0% | |
| !! | GTACTTACCATCGACTTCAT+AGG | - | chr1_4:75516161-75516180 | Msa0185380:CDS | 40.0% |
| GGACACGATCTAGTTAATCT+AGG | + | chr1_4:75516211-75516230 | None:intergenic | 40.0% | |
| TTGGCACGTAAAGTTACGTA+TGG | - | chr1_4:75516302-75516321 | Msa0185380:intron | 40.0% | |
| TGTGGAAGAGATATAGCAAG+GGG | - | chr1_4:75516402-75516421 | Msa0185380:intron | 40.0% | |
| CTCTTAGGCTACATAAGTTC+TGG | + | chr1_4:75516956-75516975 | None:intergenic | 40.0% | |
| CAGAACTTATGTAGCCTAAG+AGG | - | chr1_4:75516564-75516583 | Msa0185380:intron | 40.0% | |
| !!! | CCGGAAACCCTTATTTTGAT+AGG | - | chr1_4:75516642-75516661 | Msa0185380:intron | 40.0% |
| CAGAACTTATGTAGCCTAAG+AGG | + | chr1_4:75516564-75516583 | None:intergenic | 40.0% | |
| ATAAAACCCTCTTGCATCAG+GGG | - | chr1_4:75517097-75517116 | Msa0185380:intron | 40.0% | |
| CAGTGGATATGTCAGAATCA+CGG | - | chr1_4:75517221-75517240 | Msa0185380:intron | 40.0% | |
| GTTAAAGAGATGGAGGTTCA+AGG | - | chr1_4:75518056-75518075 | Msa0185380:intron | 40.0% | |
| AGTTTAACTGCTGGTGGAAT+GGG | + | chr1_4:75518502-75518521 | None:intergenic | 40.0% | |
| TCTTCTCTCAGTTTAACTGC+TGG | + | chr1_4:75518511-75518530 | None:intergenic | 40.0% | |
| TCCTCAATTCAAGCTCATGA+TGG | - | chr1_4:75518589-75518608 | Msa0185380:intron | 40.0% | |
| ! | TTGCTGATATTGATGACCAC+TGG | - | chr1_4:75518806-75518825 | Msa0185380:CDS | 40.0% |
| ! | TCTAGGACCTCAACATAAGA+AGG | - | chr1_4:75518906-75518925 | Msa0185380:intron | 40.0% |
| !!! | GTTTTTTGAGAGGGGATGAA+TGG | + | chr1_4:75519139-75519158 | None:intergenic | 40.0% |
| AGGAATGCAAATGTGAGTGA+TGG | + | chr1_4:75519195-75519214 | None:intergenic | 40.0% | |
| GGAAGGAGTCAAAGTAGAAA+AGG | + | chr1_4:75519215-75519234 | None:intergenic | 40.0% | |
| GGCAAAAATCCCTTTAGATG+AGG | - | chr1_4:75519316-75519335 | Msa0185380:intron | 40.0% | |
| ACATCTTTGATTCTGAGCAG+GGG | + | chr1_4:75519349-75519368 | None:intergenic | 40.0% | |
| CAACATCTTTGATTCTGAGC+AGG | + | chr1_4:75519351-75519370 | None:intergenic | 40.0% | |
| TAAAGCTGCTGCATAGACAT+AGG | + | chr1_4:75519574-75519593 | None:intergenic | 40.0% | |
| !! | AGCAGCTTTAGAGTATACAG+AGG | - | chr1_4:75519584-75519603 | Msa0185380:intron | 40.0% |
| GATCTGATATCAACTTCCTC+TGG | - | chr1_4:75519759-75519778 | Msa0185380:intron | 40.0% | |
| AGGTTTGGATAGACTAAGTG+AGG | - | chr1_4:75519965-75519984 | Msa0185380:intron | 40.0% | |
| TTCTGTCACCTCATCACAAA+TGG | + | chr1_4:75520315-75520334 | None:intergenic | 40.0% | |
| TTGTGCTATGACCCTCTATA+TGG | + | chr1_4:75520359-75520378 | None:intergenic | 40.0% | |
| CATTGAGCTATATTGCACTG+AGG | - | chr1_4:75520391-75520410 | Msa0185380:intron | 40.0% | |
| CAATGGAGAGATGCAGAAAT+TGG | - | chr1_4:75520451-75520470 | Msa0185380:intron | 40.0% | |
| AGAAATTGGATCCTTGACCA+TGG | - | chr1_4:75520465-75520484 | Msa0185380:intron | 40.0% | |
| GTTTAGTGGCTATTCCATCA+TGG | - | chr1_4:75520490-75520509 | Msa0185380:intron | 40.0% | |
| TTAGTGGCTATTCCATCATG+GGG | - | chr1_4:75520492-75520511 | Msa0185380:intron | 40.0% | |
| AGGTACTTGGAGTTTATGAG+TGG | - | chr1_4:75520622-75520641 | Msa0185380:intron | 40.0% | |
| ! | GGATGAATAGGGGTGAATTT+TGG | + | chr1_4:75520687-75520706 | None:intergenic | 40.0% |
| AAATTCACCCCTATTCATCC+AGG | - | chr1_4:75520687-75520706 | Msa0185380:intron | 40.0% | |
| CCCAAATTAATGTAGGACCT+AGG | + | chr1_4:75520719-75520738 | None:intergenic | 40.0% | |
| ! | GGAAAATGTTGTGCTACTGT+CGG | - | chr1_4:75520806-75520825 | Msa0185380:intron | 40.0% |
| AAATCAACTGGAACAAAGCC+CGG | - | chr1_4:75520934-75520953 | Msa0185380:intron | 40.0% | |
| AAATGGCATGCAATTTCAGG+AGG | - | chr1_4:75521078-75521097 | Msa0185380:intron | 40.0% | |
| AAAGGCCAGCAATTCAGAAA+AGG | + | chr1_4:75521169-75521188 | None:intergenic | 40.0% | |
| ! | TTCTGTCTAAGCTTGGTGAA+AGG | + | chr1_4:75521187-75521206 | None:intergenic | 40.0% |
| TTTCACCAAGCTTAGACAGA+AGG | - | chr1_4:75521186-75521205 | Msa0185380:intron | 40.0% | |
| TAATGCCTTCTGTCTAAGCT+TGG | + | chr1_4:75521194-75521213 | None:intergenic | 40.0% | |
| TCTCTACACTTCCAATGCAA+AGG | + | chr1_4:75521264-75521283 | None:intergenic | 40.0% | |
| ! | TTGCATTGGAAGTGTAGAGA+AGG | - | chr1_4:75521264-75521283 | Msa0185380:intron | 40.0% |
| AGTTTGTATGCCTCTGAGTT+CGG | + | chr1_4:75521322-75521341 | None:intergenic | 40.0% | |
| AGAAGATGGCTTGAAAATCC+AGG | - | chr1_4:75521378-75521397 | Msa0185380:intron | 40.0% | |
| TGTAACGTGAGTGAAGAGTA+TGG | - | chr1_4:75521804-75521823 | Msa0185380:intron | 40.0% | |
| ! | AAGAGTATGGTCCTACACTT+CGG | - | chr1_4:75521817-75521836 | Msa0185380:intron | 40.0% |
| ! | TGGATTTTCAACTACCTGTG+AGG | + | chr1_4:75521865-75521884 | None:intergenic | 40.0% |
| CAGGTAGTTGAAAATCCATC+CGG | - | chr1_4:75521867-75521886 | Msa0185380:intron | 40.0% | |
| ! | GTACATTGCTTTGAACTCAC+CGG | + | chr1_4:75521889-75521908 | None:intergenic | 40.0% |
| ACATTCTCAATGCATGACCA+AGG | - | chr1_4:75521933-75521952 | Msa0185380:intron | 40.0% | |
| TAAAACCTTGAGTCCTTCTG+CGG | + | chr1_4:75521979-75521998 | None:intergenic | 40.0% | |
| ! | CATTTTTGACAACAGGAGTG+CGG | + | chr1_4:75522099-75522118 | None:intergenic | 40.0% |
| ! | CAGTTGGCATTTTTGACAAC+AGG | + | chr1_4:75522106-75522125 | None:intergenic | 40.0% |
| ! | TTGAAGACACACTGATTGAG+AGG | - | chr1_4:75522376-75522395 | Msa0185380:intron | 40.0% |
| ! | TGAAGACACACTGATTGAGA+GGG | - | chr1_4:75522377-75522396 | Msa0185380:intron | 40.0% |
| AATAGGTATGTTGAGTGCAC+TGG | - | chr1_4:75522509-75522528 | Msa0185380:intron | 40.0% | |
| !! | GTAGCTTTGTGAAGAGATAC+AGG | + | chr1_4:75522550-75522569 | None:intergenic | 40.0% |
| TGAAACACACAAAACCCTGA+TGG | - | chr1_4:75522628-75522647 | Msa0185380:intron | 40.0% | |
| TAGAATACCAGGATCCATCA+GGG | + | chr1_4:75522645-75522664 | None:intergenic | 40.0% | |
| ATAGAATACCAGGATCCATC+AGG | + | chr1_4:75522646-75522665 | None:intergenic | 40.0% | |
| TAGTACATACACTACTCCAC+AGG | - | chr1_4:75522773-75522792 | Msa0185380:intron | 40.0% | |
| !! | TGGGGAATTTGCTATACGTA+TGG | - | chr1_4:75522805-75522824 | Msa0185380:intron | 40.0% |
| ! | TTTGCTATACGTATGGCACT+TGG | - | chr1_4:75522812-75522831 | Msa0185380:intron | 40.0% |
| TTTGCAAGGAAGGACTGTTA+CGG | + | chr1_4:75522876-75522895 | None:intergenic | 40.0% | |
| ! | TGACAAGCTTTTTGCAAGGA+AGG | + | chr1_4:75522886-75522905 | None:intergenic | 40.0% |
| TTGTCAAAGCAGCTTCCTAA+TGG | - | chr1_4:75522913-75522932 | Msa0185380:intron | 40.0% | |
| TGTCAAAGCAGCTTCCTAAT+GGG | - | chr1_4:75522914-75522933 | Msa0185380:intron | 40.0% | |
| AATTTGCACGGTTGTCTTCT+AGG | + | chr1_4:75523059-75523078 | None:intergenic | 40.0% | |
| AACTTCATTCCACGGTGTAT+GGG | + | chr1_4:75523253-75523272 | None:intergenic | 40.0% | |
| TAACTTCATTCCACGGTGTA+TGG | + | chr1_4:75523254-75523273 | None:intergenic | 40.0% | |
| GCTACACTAATTACCTGTTG+TGG | + | chr1_4:75523310-75523329 | None:intergenic | 40.0% | |
| ATGCAACTACAGGAGATAAC+AGG | - | chr1_4:75523404-75523423 | Msa0185380:intron | 40.0% | |
| GAATTTGTGCAGACAAGACT+CGG | + | chr1_4:75523511-75523530 | None:intergenic | 40.0% | |
| ACAATTCAAGGTGCAGCATT+TGG | + | chr1_4:75523533-75523552 | None:intergenic | 40.0% | |
| ATTGTAACTACTCACTACCC+AGG | - | chr1_4:75523548-75523567 | Msa0185380:CDS | 40.0% | |
| TGTACAACCAATTAGCACCT+GGG | + | chr1_4:75523568-75523587 | None:intergenic | 40.0% | |
| AAGATAGCAGAAGGAGGAGA+AGG | - | chr1_4:75513705-75513724 | Msa0185380:three_prime_UTR | 45.0% | |
| AGATAGCAGAAGGAGGAGAA+GGG | - | chr1_4:75513706-75513725 | Msa0185380:three_prime_UTR | 45.0% | |
| ACTTCATAGGACGTCAACAC+TGG | - | chr1_4:75513745-75513764 | Msa0185380:three_prime_UTR | 45.0% | |
| CTTCATAGGACGTCAACACT+GGG | - | chr1_4:75513746-75513765 | Msa0185380:three_prime_UTR | 45.0% | |
| TCTTGTGGTGTTCCTGCATT+TGG | + | chr1_4:75513780-75513799 | None:intergenic | 45.0% | |
| TGACCTCTTGATGAGAATGC+AGG | - | chr1_4:75513866-75513885 | Msa0185380:CDS | 45.0% | |
| ! | CGAGCTTAACTCAGTTGGTA+AGG | - | chr1_4:75514235-75514254 | Msa0185380:intron | 45.0% |
| TCAACTCAATGAGAGCAGAC+GGG | - | chr1_4:75514408-75514427 | Msa0185380:intron | 45.0% | |
| !!! | ATTTTTTTTGGTGGTGGCCG+GGG | - | chr1_4:75514701-75514720 | Msa0185380:intron | 45.0% |
| !!! | AGGCCGCTTTTTATTCTGTC+TGG | + | chr1_4:75514854-75514873 | None:intergenic | 45.0% |
| AAAAGCGGCCTACATAACAG+TGG | - | chr1_4:75514863-75514882 | Msa0185380:intron | 45.0% | |
| CTCCTTCATTGCCTCATACT+TGG | - | chr1_4:75515200-75515219 | Msa0185380:CDS | 45.0% | |
| !! | ATATAGCAAGGGGTTGATGC+AGG | - | chr1_4:75516412-75516431 | Msa0185380:intron | 45.0% |
| CTCTCAATTCTCGTGGATTC+CGG | - | chr1_4:75516623-75516642 | Msa0185380:intron | 45.0% | |
| ! | CAGTTGGTATCAGAGCAGTA+CGG | + | chr1_4:75516757-75516776 | None:intergenic | 45.0% |
| TGATACCAACTGACGCAGTA+CGG | - | chr1_4:75516765-75516784 | Msa0185380:intron | 45.0% | |
| !! | CTCTCAATTCTGGTGGATTC+TGG | + | chr1_4:75516899-75516918 | None:intergenic | 45.0% |
| ! | GGTTGTAGCATTTCGAGTCT+GGG | + | chr1_4:75517127-75517146 | None:intergenic | 45.0% |
| ! | TGGTTGTAGCATTTCGAGTC+TGG | + | chr1_4:75517128-75517147 | None:intergenic | 45.0% |
| AGGAGGTTGAGTATCTCAAC+TGG | - | chr1_4:75518021-75518040 | Msa0185380:intron | 45.0% | |
| GGAGGTTGAGTATCTCAACT+GGG | - | chr1_4:75518022-75518041 | Msa0185380:intron | 45.0% | |
| GTTTAACTGCTGGTGGAATG+GGG | + | chr1_4:75518501-75518520 | None:intergenic | 45.0% | |
| CAGTTTAACTGCTGGTGGAA+TGG | + | chr1_4:75518503-75518522 | None:intergenic | 45.0% | |
| TCTCTCAGTTTAACTGCTGG+TGG | + | chr1_4:75518508-75518527 | None:intergenic | 45.0% | |
| GCCATCATGAGCTTGAATTG+AGG | + | chr1_4:75518593-75518612 | None:intergenic | 45.0% | |
| AAAGGGACTTCACTCACCAA+TGG | + | chr1_4:75518658-75518677 | None:intergenic | 45.0% | |
| GTAATGGCCCTCTATGTTAC+AGG | - | chr1_4:75518868-75518887 | Msa0185380:CDS | 45.0% | |
| ! | TGCAAATGTGAGTGATGGTG+AGG | + | chr1_4:75519190-75519209 | None:intergenic | 45.0% |
| ! | TCTGAAGCAAAATAGGGGGA+AGG | + | chr1_4:75519232-75519251 | None:intergenic | 45.0% |
| GGAAGGGATCCTCATCTAAA+GGG | + | chr1_4:75519328-75519347 | None:intergenic | 45.0% | |
| TTTGATTCTGAGCAGGGGAA+GGG | + | chr1_4:75519344-75519363 | None:intergenic | 45.0% | |
| TACCGATGTGAAGGAGGATA+CGG | + | chr1_4:75519427-75519446 | None:intergenic | 45.0% | |
| CTATGTTACCGATGTGAAGG+AGG | + | chr1_4:75519433-75519452 | None:intergenic | 45.0% | |
| TGCATAGACATAGGCTACCT+TGG | + | chr1_4:75519565-75519584 | None:intergenic | 45.0% | |
| ATGAGGTGACAGAACGAAGA+TGG | - | chr1_4:75520321-75520340 | Msa0185380:intron | 45.0% | |
| !! | ACAGAACGAAGATGGTGGAT+GGG | - | chr1_4:75520329-75520348 | Msa0185380:intron | 45.0% |
| TGGATGGGGATTCCATATAG+AGG | - | chr1_4:75520344-75520363 | Msa0185380:intron | 45.0% | |
| GGATGGGGATTCCATATAGA+GGG | - | chr1_4:75520345-75520364 | Msa0185380:intron | 45.0% | |
| GAGGGTCATAGCACAATGTT+TGG | - | chr1_4:75520363-75520382 | Msa0185380:intron | 45.0% | |
| TATATTGCACTGAGGCTGCT+TGG | - | chr1_4:75520399-75520418 | Msa0185380:intron | 45.0% | |
| ACCTGAAGATGGTGAAGACA+AGG | - | chr1_4:75520428-75520447 | Msa0185380:intron | 45.0% | |
| AGATGGTGAAGACAAGGCAA+TGG | - | chr1_4:75520434-75520453 | Msa0185380:intron | 45.0% | |
| AATTGGATCCTTGACCATGG+TGG | - | chr1_4:75520468-75520487 | Msa0185380:intron | 45.0% | |
| GAATAGCCACTAAACCACCA+TGG | + | chr1_4:75520485-75520504 | None:intergenic | 45.0% | |
| TTCCATCATGGGGAAAGTTC+TGG | - | chr1_4:75520502-75520521 | Msa0185380:intron | 45.0% | |
| TCCATCATGGGGAAAGTTCT+GGG | - | chr1_4:75520503-75520522 | Msa0185380:intron | 45.0% | |
| ATCCACTTCCACCAGAATTC+TGG | - | chr1_4:75520655-75520674 | Msa0185380:intron | 45.0% | |
| AACCAGAATTCTGGTGGAAG+TGG | + | chr1_4:75520660-75520679 | None:intergenic | 45.0% | |
| GGTAGAAACCAGAATTCTGG+TGG | + | chr1_4:75520666-75520685 | None:intergenic | 45.0% | |
| GTATGCACCTGGATGAATAG+GGG | + | chr1_4:75520697-75520716 | None:intergenic | 45.0% | |
| GGTATGCACCTGGATGAATA+GGG | + | chr1_4:75520698-75520717 | None:intergenic | 45.0% | |
| AGGTATGCACCTGGATGAAT+AGG | + | chr1_4:75520699-75520718 | None:intergenic | 45.0% | |
| ATTCATCCAGGTGCATACCT+AGG | - | chr1_4:75520699-75520718 | Msa0185380:intron | 45.0% | |
| AGCCCGGAATACTATTGCTA+AGG | - | chr1_4:75520950-75520969 | Msa0185380:intron | 45.0% | |
| TGCTAAGGTTTGTACGTGTG+TGG | - | chr1_4:75520965-75520984 | Msa0185380:intron | 45.0% | |
| ! | GAGAGCCTTTTCTGAATTGC+TGG | - | chr1_4:75521161-75521180 | Msa0185380:intron | 45.0% |
| GTTTGTATGCCTCTGAGTTC+GGG | + | chr1_4:75521321-75521340 | None:intergenic | 45.0% | |
| CCAGAAGTAATCAGGGATTC+GGG | + | chr1_4:75521353-75521372 | None:intergenic | 45.0% | |
| GCCAGAAGTAATCAGGGATT+CGG | + | chr1_4:75521354-75521373 | None:intergenic | 45.0% | |
| CTGCAAGCCAGAAGTAATCA+GGG | + | chr1_4:75521360-75521379 | None:intergenic | 45.0% | |
| TCTGCAAGCCAGAAGTAATC+AGG | + | chr1_4:75521361-75521380 | None:intergenic | 45.0% | |
| !! | TACTTCTGGCTTGCAGAAGA+TGG | - | chr1_4:75521364-75521383 | Msa0185380:intron | 45.0% |
| GAAATGTTGCAGGCCTTAGT+TGG | + | chr1_4:75521430-75521449 | None:intergenic | 45.0% | |
| !! | AGAGCTTTGGGTGTCAAATG+TGG | - | chr1_4:75521748-75521767 | Msa0185380:intron | 45.0% |
| !! | GAGCTTTGGGTGTCAAATGT+GGG | - | chr1_4:75521749-75521768 | Msa0185380:intron | 45.0% |
| TCATGTGCTTTCCGAAGTGT+AGG | + | chr1_4:75521831-75521850 | None:intergenic | 45.0% | |
| ! | GAAAGCACATGACTTCCTGA+AGG | - | chr1_4:75521839-75521858 | Msa0185380:intron | 45.0% |
| ! | ATTGCTTTGAACTCACCGGA+TGG | + | chr1_4:75521885-75521904 | None:intergenic | 45.0% |
| GACACATATGCAAAGGATCG+TGG | - | chr1_4:75521910-75521929 | Msa0185380:intron | 45.0% | |
| TCTCAATGCATGACCAAGGT+TGG | - | chr1_4:75521937-75521956 | Msa0185380:intron | 45.0% | |
| !!! | AATTTTGAGGCTCCCAAGCA+GGG | + | chr1_4:75522214-75522233 | None:intergenic | 45.0% |
| ACACCCAACTCATAGAGCTA+AGG | - | chr1_4:75522568-75522587 | Msa0185380:intron | 45.0% | |
| CATACACTACTCCACAGGTA+CGG | - | chr1_4:75522778-75522797 | Msa0185380:intron | 45.0% | |
| GTAGAGGGACTAACAACTTG+TGG | - | chr1_4:75522841-75522860 | Msa0185380:intron | 45.0% | |
| GTCAAAGCAGCTTCCTAATG+GGG | - | chr1_4:75522915-75522934 | Msa0185380:intron | 45.0% | |
| TCAAAGCAGCTTCCTAATGG+GGG | - | chr1_4:75522916-75522935 | Msa0185380:intron | 45.0% | |
| !! | TGGGCTTTGTTGTCCCTTAT+CGG | - | chr1_4:75523093-75523112 | Msa0185380:intron | 45.0% |
| AGATGGAGATTTCCCACAAC+AGG | - | chr1_4:75523294-75523313 | Msa0185380:intron | 45.0% | |
| ATCTTTCCCATATGGGCTCT+GGG | - | chr1_4:75523473-75523492 | Msa0185380:intron | 45.0% | |
| GTGTACAACCAATTAGCACC+TGG | + | chr1_4:75523569-75523588 | None:intergenic | 45.0% | |
| !!! | TTAAAATTTGTAATTTTTTA+TGG | + | chr1_4:75514924-75514943 | None:intergenic | 5.0% |
| !!! | TTAGAAAAAATTTATTTTAT+GGG | + | chr1_4:75517390-75517409 | None:intergenic | 5.0% |
| !!! | ATTTCAAATTTTAAAAAATA+GGG | + | chr1_4:75517709-75517728 | None:intergenic | 5.0% |
| !!! | AATTTCAAATTTTAAAAAAT+AGG | + | chr1_4:75517710-75517729 | None:intergenic | 5.0% |
| !!! | AAAATTTGAAATTTATTAAA+AGG | - | chr1_4:75517717-75517736 | Msa0185380:intron | 5.0% |
| !! | AATTTAATATAAATTAATCA+TGG | - | chr1_4:75521640-75521659 | Msa0185380:intron | 5.0% |
| AAGGTACGAGGTTGAAACCC+CGG | + | chr1_4:75514721-75514740 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAACTCAGT+TGG | + | chr1_4:75514767-75514786 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGCTCACG+AGG | - | chr1_4:75514764-75514783 | Msa0185380:CDS | 50.0% | |
| GTTAGTGTTCGTCTGAACGC+TGG | - | chr1_4:75518160-75518179 | Msa0185380:intron | 50.0% | |
| TTCAAGCTCATGATGGCCAC+TGG | - | chr1_4:75518596-75518615 | Msa0185380:intron | 50.0% | |
| GGGAAGGGATCCTCATCTAA+AGG | + | chr1_4:75519329-75519348 | None:intergenic | 50.0% | |
| CTTTGATTCTGAGCAGGGGA+AGG | + | chr1_4:75519345-75519364 | None:intergenic | 50.0% | |
| CTCCGTATCCTCCTTCACAT+CGG | - | chr1_4:75519422-75519441 | Msa0185380:intron | 50.0% | |
| ! | TGAGCTGTGGGTTATTCCAG+AGG | + | chr1_4:75519778-75519797 | None:intergenic | 50.0% |
| TGCGGTCATCATTGTGCACA+AGG | - | chr1_4:75520004-75520023 | Msa0185380:intron | 50.0% | |
| AGGTGACAGAACGAAGATGG+TGG | - | chr1_4:75520324-75520343 | Msa0185380:intron | 50.0% | |
| !! | GACAGAACGAAGATGGTGGA+TGG | - | chr1_4:75520328-75520347 | Msa0185380:intron | 50.0% |
| !! | CAGAACGAAGATGGTGGATG+GGG | - | chr1_4:75520330-75520349 | Msa0185380:intron | 50.0% |
| CTTGGAGAAGGACCTGAAGA+TGG | - | chr1_4:75520417-75520436 | Msa0185380:intron | 50.0% | |
| GCCTTGTCTTCACCATCTTC+AGG | + | chr1_4:75520432-75520451 | None:intergenic | 50.0% | |
| CCACTAAACCACCATGGTCA+AGG | + | chr1_4:75520479-75520498 | None:intergenic | 50.0% | |
| CCTTGACCATGGTGGTTTAG+TGG | - | chr1_4:75520476-75520495 | Msa0185380:intron | 50.0% | |
| ACCCAGAACTTTCCCCATGA+TGG | + | chr1_4:75520507-75520526 | None:intergenic | 50.0% | |
| !! | ATGGGGAAAGTTCTGGGTCA+CGG | - | chr1_4:75520509-75520528 | Msa0185380:intron | 50.0% |
| CTTGGAGTTTATGAGTGGCG+AGG | - | chr1_4:75520627-75520646 | Msa0185380:intron | 50.0% | |
| CCCGAATCCCTGATTACTTC+TGG | - | chr1_4:75521350-75521369 | Msa0185380:intron | 50.0% | |
| AGTCAGAGACTTGCCAACCT+TGG | + | chr1_4:75521953-75521972 | None:intergenic | 50.0% | |
| CATTACTGCTCTGTAGCGAG+AGG | + | chr1_4:75522184-75522203 | None:intergenic | 50.0% | |
| CTCTCGCTACAGAGCAGTAA+TGG | - | chr1_4:75522182-75522201 | Msa0185380:intron | 50.0% | |
| TCGCTACAGAGCAGTAATGG+CGG | - | chr1_4:75522185-75522204 | Msa0185380:intron | 50.0% | |
| !!! | GAATTTTGAGGCTCCCAAGC+AGG | + | chr1_4:75522215-75522234 | None:intergenic | 50.0% |
| ! | CACAAAACCCTGATGGATCC+TGG | - | chr1_4:75522635-75522654 | Msa0185380:intron | 50.0% |
| !! | TGGCACTTGGTTTGCTGTAG+AGG | - | chr1_4:75522825-75522844 | Msa0185380:intron | 50.0% |
| !! | GGCACTTGGTTTGCTGTAGA+GGG | - | chr1_4:75522826-75522845 | Msa0185380:intron | 50.0% |
| CAAAGCAGCTTCCTAATGGG+GGG | - | chr1_4:75522917-75522936 | Msa0185380:intron | 50.0% | |
| TTGTTGTCCCTTATCGGTGC+AGG | - | chr1_4:75523099-75523118 | Msa0185380:intron | 50.0% | |
| TGTTGTCCCTTATCGGTGCA+GGG | - | chr1_4:75523100-75523119 | Msa0185380:intron | 50.0% | |
| ATTCCACGGTGTATGGGTGT+AGG | + | chr1_4:75523247-75523266 | None:intergenic | 50.0% | |
| CATCTTTCCCATATGGGCTC+TGG | - | chr1_4:75523472-75523491 | Msa0185380:intron | 50.0% | |
| TACTCTCCCAGAGCCCATAT+GGG | + | chr1_4:75523482-75523501 | None:intergenic | 50.0% | |
| ATACTCTCCCAGAGCCCATA+TGG | + | chr1_4:75523483-75523502 | None:intergenic | 50.0% | |
| CTCACTACCCAGGTGCTAAT+TGG | - | chr1_4:75523558-75523577 | Msa0185380:CDS | 50.0% | |
| CCAACTGAGTTAAGCTCGCG+AGG | + | chr1_4:75514233-75514252 | None:intergenic | 55.0% | |
| CCTCGCGAGCTTAACTCAGT+TGG | - | chr1_4:75514230-75514249 | Msa0185380:intron | 55.0% | |
| ! | CAGAGCAGTACGGAAGCGTA+GGG | + | chr1_4:75516747-75516766 | None:intergenic | 55.0% |
| ! | TCAGAGCAGTACGGAAGCGT+AGG | + | chr1_4:75516748-75516767 | None:intergenic | 55.0% |
| ! | TGACGCAGTACGGAAGCGTA+GGG | - | chr1_4:75516775-75516794 | Msa0185380:intron | 55.0% |
| AAACCCTCTTGCATCAGGGG+TGG | - | chr1_4:75517100-75517119 | Msa0185380:intron | 55.0% | |
| AAAGGGCCAGCAGATTCTGC+AGG | + | chr1_4:75518622-75518641 | None:intergenic | 55.0% | |
| TATGCGAATTGTGGTCGGCG+AGG | - | chr1_4:75520074-75520093 | Msa0185380:intron | 55.0% | |
| GTAGGACCTAGGTATGCACC+TGG | + | chr1_4:75520708-75520727 | None:intergenic | 55.0% | |
| GGTTGAAGACCCGAACTCAG+AGG | - | chr1_4:75521309-75521328 | Msa0185380:intron | 55.0% | |
| TGACTTCCTGAAGGCCTCAC+AGG | - | chr1_4:75521848-75521867 | Msa0185380:intron | 55.0% | |
| CAACTACCTGTGAGGCCTTC+AGG | + | chr1_4:75521857-75521876 | None:intergenic | 55.0% | |
| CGCTACAGAGCAGTAATGGC+GGG | - | chr1_4:75522186-75522205 | Msa0185380:intron | 55.0% | |
| !! | TAATGGCGGGTTCCCTGCTT+GGG | - | chr1_4:75522199-75522218 | Msa0185380:intron | 55.0% |
| TACTCCACAGGTACGGCTGT+TGG | - | chr1_4:75522785-75522804 | Msa0185380:intron | 55.0% | |
| ACTCCACAGGTACGGCTGTT+GGG | - | chr1_4:75522786-75522805 | Msa0185380:intron | 55.0% | |
| ! | AACCTGCCCTGCACCGATAA+GGG | + | chr1_4:75523109-75523128 | None:intergenic | 55.0% |
| ! | TAACCTGCCCTGCACCGATA+AGG | + | chr1_4:75523110-75523129 | None:intergenic | 55.0% |
| CTAGCTTAGCTCCTGCCTCT+TGG | - | chr1_4:75523148-75523167 | Msa0185380:intron | 55.0% | |
| GATCCTACACCCATACACCG+TGG | - | chr1_4:75523241-75523260 | Msa0185380:intron | 55.0% | |
| CGCTTCCGTACTGCGTCAGT+TGG | + | chr1_4:75516773-75516792 | None:intergenic | 60.0% | |
| ! | CTGACGCAGTACGGAAGCGT+AGG | - | chr1_4:75516774-75516793 | Msa0185380:intron | 60.0% |
| GGTCCACCCCTGATGCAAGA+GGG | + | chr1_4:75517106-75517125 | None:intergenic | 60.0% | |
| CAGCAGATTCTGCAGGCCAG+TGG | + | chr1_4:75518615-75518634 | None:intergenic | 60.0% | |
| ! | CACTGGCCTGCAGAATCTGC+TGG | - | chr1_4:75518613-75518632 | Msa0185380:intron | 60.0% |
| GCACTGAGGCTGCTTGGAGA+AGG | - | chr1_4:75520405-75520424 | Msa0185380:intron | 60.0% | |
| GTCTCTGACTGCACCGCAGA+AGG | - | chr1_4:75521963-75521982 | Msa0185380:intron | 60.0% | |
| CTGCACCGCAGAAGGACTCA+AGG | - | chr1_4:75521971-75521990 | Msa0185380:intron | 60.0% | |
| !! | GTAATGGCGGGTTCCCTGCT+TGG | - | chr1_4:75522198-75522217 | Msa0185380:intron | 60.0% |
| CTCCACAGGTACGGCTGTTG+GGG | - | chr1_4:75522787-75522806 | Msa0185380:intron | 60.0% | |
| TTCCCCAACAGCCGTACCTG+TGG | + | chr1_4:75522792-75522811 | None:intergenic | 60.0% | |
| AGCAGCTTCCTAATGGGGGG+TGG | - | chr1_4:75522920-75522939 | Msa0185380:intron | 60.0% | |
| GCAGCTTCCTAATGGGGGGT+GGG | - | chr1_4:75522921-75522940 | Msa0185380:intron | 60.0% | |
| CAGCTTCCTAATGGGGGGTG+GGG | - | chr1_4:75522922-75522941 | Msa0185380:intron | 60.0% | |
| CTTTCTCCCCACCCCCCATT+AGG | + | chr1_4:75522931-75522950 | None:intergenic | 60.0% | |
| GGGTCCACCCCTGATGCAAG+AGG | + | chr1_4:75517107-75517126 | None:intergenic | 65.0% | |
| GTCCCTTATCGGTGCAGGGC+AGG | - | chr1_4:75523104-75523123 | Msa0185380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 75513596 | 75523790 | 75513596 | ID=Msa0185380;Name=Msa0185380 |
| chr1_4 | mRNA | 75513596 | 75523790 | 75513596 | ID=Msa0185380-mRNA-1;Parent=Msa0185380;Name=Msa0185380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=97|0.85|0.86|1|1|1|15|243|734 |
| chr1_4 | exon | 75513596 | 75513970 | 75513596 | ID=Msa0185380-mRNA-1:exon:25749;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75514071 | 75514154 | 75514071 | ID=Msa0185380-mRNA-1:exon:25748;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75514261 | 75514341 | 75514261 | ID=Msa0185380-mRNA-1:exon:25747;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75514414 | 75514541 | 75514414 | ID=Msa0185380-mRNA-1:exon:25746;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75514730 | 75514872 | 75514730 | ID=Msa0185380-mRNA-1:exon:25745;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75514986 | 75515032 | 75514986 | ID=Msa0185380-mRNA-1:exon:25744;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75515136 | 75515291 | 75515136 | ID=Msa0185380-mRNA-1:exon:25743;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75515394 | 75515636 | 75515394 | ID=Msa0185380-mRNA-1:exon:25742;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75515987 | 75516289 | 75515987 | ID=Msa0185380-mRNA-1:exon:25741;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75516415 | 75516580 | 75516415 | ID=Msa0185380-mRNA-1:exon:25740;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75516710 | 75516762 | 75516710 | ID=Msa0185380-mRNA-1:exon:25739;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75516856 | 75517053 | 75516856 | ID=Msa0185380-mRNA-1:exon:25738;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75518429 | 75518518 | 75518429 | ID=Msa0185380-mRNA-1:exon:25737;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75518726 | 75518911 | 75518726 | ID=Msa0185380-mRNA-1:exon:25736;Parent=Msa0185380-mRNA-1 |
| chr1_4 | exon | 75523499 | 75523790 | 75523499 | ID=Msa0185380-mRNA-1:exon:25735;Parent=Msa0185380-mRNA-1 |
| chr1_4 | five_prime_UTR | 75523694 | 75523790 | 75523694 | ID=Msa0185380-mRNA-1:five_prime_utr;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75523499 | 75523693 | 75523499 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75518726 | 75518911 | 75518726 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75518429 | 75518518 | 75518429 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75516856 | 75517053 | 75516856 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75516710 | 75516762 | 75516710 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75516415 | 75516580 | 75516415 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75515987 | 75516289 | 75515987 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75515394 | 75515636 | 75515394 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75515136 | 75515291 | 75515136 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75514986 | 75515032 | 75514986 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75514730 | 75514872 | 75514730 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75514414 | 75514541 | 75514414 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75514261 | 75514341 | 75514261 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75514071 | 75514154 | 75514071 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | CDS | 75513839 | 75513970 | 75513839 | ID=Msa0185380-mRNA-1:cds;Parent=Msa0185380-mRNA-1 |
| chr1_4 | three_prime_UTR | 75513596 | 75513838 | 75513596 | ID=Msa0185380-mRNA-1:three_prime_utr;Parent=Msa0185380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
