Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758320 | XP_003612131.2 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 5.51e-149 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758320 | sp|Q9XI31|GLYI4_ARATH | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.49e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758320 | G7KGE7 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 2.63e-149 | 422 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012440 | Msa0758320 | 0.811635 | 6.343079e-51 | -8.615850e-47 |
| Msa0017510 | Msa0758320 | 0.822746 | 2.008537e-53 | -8.615850e-47 |
| Msa0029540 | Msa0758320 | -0.804989 | 1.657271e-49 | -8.615850e-47 |
| Msa0036430 | Msa0758320 | 0.831731 | 1.413509e-55 | -8.615850e-47 |
| Msa0036960 | Msa0758320 | 0.817743 | 2.815294e-52 | -8.615850e-47 |
| Msa0044020 | Msa0758320 | 0.806101 | 9.687097e-50 | -8.615850e-47 |
| Msa0044100 | Msa0758320 | 0.833675 | 4.654407e-56 | -8.615850e-47 |
| Msa0057240 | Msa0758320 | 0.801736 | 7.823720e-49 | -8.615850e-47 |
| Msa0072370 | Msa0758320 | 0.803896 | 2.801080e-49 | -8.615850e-47 |
| Msa0078430 | Msa0758320 | 0.814810 | 1.274607e-51 | -8.615850e-47 |
| Msa0084500 | Msa0758320 | 0.810665 | 1.029721e-50 | -8.615850e-47 |
| Msa0095540 | Msa0758320 | 0.830327 | 3.125813e-55 | -8.615850e-47 |
| Msa0096000 | Msa0758320 | 0.819129 | 1.365719e-52 | -8.615850e-47 |
| Msa0098440 | Msa0758320 | 0.806920 | 6.506298e-50 | -8.615850e-47 |
| Msa0105420 | Msa0758320 | 0.822710 | 2.048220e-53 | -8.615850e-47 |
| Msa0609430 | Msa0758320 | 0.810712 | 1.005712e-50 | -8.615850e-47 |
| Msa0611380 | Msa0758320 | 0.901823 | 1.814154e-78 | -8.615850e-47 |
| Msa0618180 | Msa0758320 | 0.862145 | 6.235891e-64 | -8.615850e-47 |
| Msa0618220 | Msa0758320 | 0.855406 | 6.445176e-62 | -8.615850e-47 |
| Msa0618290 | Msa0758320 | 0.823439 | 1.384541e-53 | -8.615850e-47 |
| Msa0619070 | Msa0758320 | 0.817331 | 3.485873e-52 | -8.615850e-47 |
| Msa0619990 | Msa0758320 | 0.851861 | 6.733370e-61 | -8.615850e-47 |
| Msa0621890 | Msa0758320 | 0.818670 | 1.736805e-52 | -8.615850e-47 |
| Msa0628640 | Msa0758320 | 0.903047 | 5.190682e-79 | -8.615850e-47 |
| Msa0631120 | Msa0758320 | 0.911310 | 7.029014e-83 | -8.615850e-47 |
| Msa0633840 | Msa0758320 | 0.807382 | 5.195300e-50 | -8.615850e-47 |
| Msa0650070 | Msa0758320 | 0.816601 | 5.083987e-52 | -8.615850e-47 |
| Msa0666030 | Msa0758320 | 0.882651 | 8.713731e-71 | -8.615850e-47 |
| Msa0669340 | Msa0758320 | 0.889561 | 2.170013e-73 | -8.615850e-47 |
| Msa0684500 | Msa0758320 | 0.854559 | 1.135747e-61 | -8.615850e-47 |
| Msa0692060 | Msa0758320 | 0.812068 | 5.104691e-51 | -8.615850e-47 |
| Msa0701970 | Msa0758320 | 0.866539 | 2.647422e-65 | -8.615850e-47 |
| Msa0706420 | Msa0758320 | 0.846359 | 2.281960e-59 | -8.615850e-47 |
| Msa0709500 | Msa0758320 | 0.812717 | 3.684556e-51 | -8.615850e-47 |
| Msa0716450 | Msa0758320 | 0.900287 | 8.520231e-78 | -8.615850e-47 |
| Msa0717260 | Msa0758320 | 0.963613 | 2.667765e-122 | -8.615850e-47 |
| Msa0734230 | Msa0758320 | 0.855125 | 7.779273e-62 | -8.615850e-47 |
| Msa0741900 | Msa0758320 | 0.808630 | 2.817800e-50 | -8.615850e-47 |
| Msa0754370 | Msa0758320 | 0.804697 | 1.907101e-49 | -8.615850e-47 |
| Msa0754720 | Msa0758320 | -0.808168 | 3.535225e-50 | -8.615850e-47 |
| Msa0758320 | Msa0775440 | 0.882819 | 7.565593e-71 | -8.615850e-47 |
| Msa0758320 | Msa0780740 | 0.804720 | 1.886840e-49 | -8.615850e-47 |
| Msa0758320 | Msa0787260 | 0.806501 | 7.978073e-50 | -8.615850e-47 |
| Msa0758320 | Msa0790850 | 0.815303 | 9.906140e-52 | -8.615850e-47 |
| Msa0758320 | Msa0795690 | 0.805105 | 1.567443e-49 | -8.615850e-47 |
| Msa0758320 | Msa0799030 | 0.890132 | 1.298535e-73 | -8.615850e-47 |
| Msa0758320 | Msa0799700 | 0.893054 | 8.984112e-75 | -8.615850e-47 |
| Msa0758320 | Msa0810020 | 0.826130 | 3.211418e-54 | -8.615850e-47 |
| Msa0758320 | Msa0812820 | 0.873143 | 1.847063e-67 | -8.615850e-47 |
| Msa0758320 | Msa0822990 | 0.832595 | 8.644471e-56 | -8.615850e-47 |
| Msa0758320 | Msa0837440 | 0.890191 | 1.231028e-73 | -8.615850e-47 |
| Msa0758320 | Msa0837980 | 0.986712 | 1.028377e-167 | -8.615850e-47 |
| Msa0758320 | Msa0853320 | 0.903184 | 4.506663e-79 | -8.615850e-47 |
| Msa0758320 | Msa0855310 | 0.800737 | 1.252348e-48 | -8.615850e-47 |
| Msa0758320 | Msa0862100 | 0.812848 | 3.447876e-51 | -8.615850e-47 |
| Msa0758320 | Msa0870620 | 0.812422 | 4.273818e-51 | -8.615850e-47 |
| Msa0758320 | Msa0870690 | 0.800669 | 1.293382e-48 | -8.615850e-47 |
| Msa0758320 | Msa0872310 | 0.811830 | 5.752988e-51 | -8.615850e-47 |
| Msa0758320 | Msa0880140 | 0.828932 | 6.830203e-55 | -8.615850e-47 |
| Msa0758320 | Msa0880710 | 0.822388 | 2.432648e-53 | -8.615850e-47 |
| Msa0758320 | Msa0885060 | 0.808061 | 3.726791e-50 | -8.615850e-47 |
| Msa0758320 | Msa0936270 | 0.824820 | 6.562771e-54 | -8.615850e-47 |
| Msa0758320 | Msa0944770 | 0.825207 | 5.317159e-54 | -8.615850e-47 |
| Msa0758320 | Msa0946320 | 0.803208 | 3.889632e-49 | -8.615850e-47 |
| Msa0758320 | Msa0951710 | 0.804976 | 1.667740e-49 | -8.615850e-47 |
| Msa0758320 | Msa0966340 | 0.804991 | 1.655672e-49 | -8.615850e-47 |
| Msa0758320 | Msa0966420 | 0.814954 | 1.183912e-51 | -8.615850e-47 |
| Msa0758320 | Msa0966440 | 0.801228 | 9.938775e-49 | -8.615850e-47 |
| Msa0758320 | Msa0981010 | 0.821091 | 4.853593e-53 | -8.615850e-47 |
| Msa0758320 | Msa1001770 | 0.813875 | 2.051097e-51 | -8.615850e-47 |
| Msa0758320 | Msa1002620 | 0.898710 | 4.061191e-77 | -8.615850e-47 |
| Msa0758320 | Msa1007610 | -0.808209 | 3.464953e-50 | -8.615850e-47 |
| Msa0758320 | Msa1010110 | 0.812936 | 3.299007e-51 | -8.615850e-47 |
| Msa0758320 | Msa1013400 | 0.801968 | 7.008019e-49 | -8.615850e-47 |
| Msa0758320 | Msa1019020 | 0.801183 | 1.015574e-48 | -8.615850e-47 |
| Msa0758320 | Msa1020720 | 0.833021 | 6.774562e-56 | -8.615850e-47 |
| Msa0758320 | Msa1033560 | 0.858277 | 9.200969e-63 | -8.615850e-47 |
| Msa0758320 | Msa1073340 | 0.817954 | 2.522031e-52 | -8.615850e-47 |
| Msa0758320 | Msa1073350 | 0.816470 | 5.438690e-52 | -8.615850e-47 |
| Msa0758320 | Msa1083150 | 0.805637 | 1.212420e-49 | -8.615850e-47 |
| Msa0758320 | Msa1104000 | 0.802680 | 5.001815e-49 | -8.615850e-47 |
| Msa0758320 | Msa1113850 | 0.857984 | 1.124128e-62 | -8.615850e-47 |
| Msa0758320 | Msa1125760 | 0.817019 | 4.096489e-52 | -8.615850e-47 |
| Msa0758320 | Msa1139410 | 0.812730 | 3.660667e-51 | -8.615850e-47 |
| Msa0758320 | Msa1139810 | 0.806492 | 8.014185e-50 | -8.615850e-47 |
| Msa0758320 | Msa1160400 | 0.866488 | 2.749158e-65 | -8.615850e-47 |
| Msa0758320 | Msa1171360 | 0.813205 | 2.879504e-51 | -8.615850e-47 |
| Msa0758320 | Msa1172450 | 0.807443 | 5.041580e-50 | -8.615850e-47 |
| Msa0758320 | Msa1172590 | 0.815568 | 8.648703e-52 | -8.615850e-47 |
| Msa0758320 | Msa1172670 | 0.823936 | 1.059009e-53 | -8.615850e-47 |
| Msa0758320 | Msa1179460 | 0.834596 | 2.736150e-56 | -8.615850e-47 |
| Msa0758320 | Msa1190120 | 0.864701 | 1.006252e-64 | -8.615850e-47 |
| Msa0758320 | Msa1197590 | 0.852299 | 5.055396e-61 | -8.615850e-47 |
| Msa0758320 | Msa1201890 | 0.827817 | 1.268776e-54 | -8.615850e-47 |
| Msa0758320 | Msa1203000 | 0.889561 | 2.168654e-73 | -8.615850e-47 |
| Msa0758320 | Msa1205960 | 0.805092 | 1.577102e-49 | -8.615850e-47 |
| Msa0758320 | Msa1211550 | 0.879603 | 1.088634e-69 | -8.615850e-47 |
| Msa0758320 | Msa1217860 | 0.821323 | 4.290970e-53 | -8.615850e-47 |
| Msa0758320 | Msa1217940 | 0.848608 | 5.499019e-60 | -8.615850e-47 |
| Msa0758320 | Msa1218480 | 0.820127 | 8.080391e-53 | -8.615850e-47 |
| Msa0758320 | Msa1219260 | 0.903131 | 4.759784e-79 | -8.615850e-47 |
| Msa0758320 | Msa1227950 | 0.851196 | 1.038543e-60 | -8.615850e-47 |
| Msa0758320 | Msa1227970 | 0.849452 | 3.204348e-60 | -8.615850e-47 |
| Msa0758320 | Msa1254700 | 0.848718 | 5.125394e-60 | -8.615850e-47 |
| Msa0758320 | Msa1255040 | -0.806065 | 9.855757e-50 | -8.615850e-47 |
| Msa0758320 | Msa1255280 | 0.881312 | 2.665411e-70 | -8.615850e-47 |
| Msa0758320 | Msa1258050 | 0.871861 | 4.949356e-67 | -8.615850e-47 |
| Msa0758320 | Msa1264020 | 0.801925 | 7.152691e-49 | -8.615850e-47 |
| Msa0758320 | Msa1265960 | 0.808206 | 3.469960e-50 | -8.615850e-47 |
| Msa0758320 | Msa1266960 | 0.899250 | 2.387815e-77 | -8.615850e-47 |
| Msa0758320 | Msa1291870 | 0.841643 | 4.194808e-58 | -8.615850e-47 |
| Msa0758320 | Msa1308130 | 0.814486 | 1.503671e-51 | -8.615850e-47 |
| Msa0758320 | Msa1321000 | 0.813760 | 2.174814e-51 | -8.615850e-47 |
| Msa0758320 | Msa1329920 | 0.822952 | 1.798995e-53 | -8.615850e-47 |
| Msa0758320 | Msa1339940 | 0.872799 | 2.409443e-67 | -8.615850e-47 |
| Msa0758320 | Msa1342430 | 0.815809 | 7.642858e-52 | -8.615850e-47 |
| Msa0758320 | Msa1343820 | 0.804332 | 2.273166e-49 | -8.615850e-47 |
| Msa0758320 | Msa1353060 | 0.802011 | 6.868922e-49 | -8.615850e-47 |
| Msa0758320 | Msa1369700 | 0.873594 | 1.303343e-67 | -8.615850e-47 |
| Msa0758320 | Msa1379990 | 0.807327 | 5.337392e-50 | -8.615850e-47 |
| Msa0758320 | Msa1381140 | 0.803521 | 3.351379e-49 | -8.615850e-47 |
| Msa0758320 | Msa1390310 | 0.801281 | 9.697201e-49 | -8.615850e-47 |
| Msa0758320 | Msa1395870 | 0.882343 | 1.128018e-70 | -8.615850e-47 |
| Msa0758320 | Msa1397250 | 0.855741 | 5.147947e-62 | -8.615850e-47 |
| Msa0758320 | Msa1397340 | 0.810962 | 8.877870e-51 | -8.615850e-47 |
| Msa0758320 | Msa1399560 | 0.895947 | 5.900967e-76 | -8.615850e-47 |
| Msa0758320 | Msa1401150 | 0.844548 | 7.063694e-59 | -8.615850e-47 |
| Msa0758320 | Msa1405180 | 0.802704 | 4.945450e-49 | -8.615850e-47 |
| Msa0758320 | Msa1420060 | 0.802375 | 5.780807e-49 | -8.615850e-47 |
| Msa0758320 | Msa1423450 | 0.824895 | 6.297710e-54 | -8.615850e-47 |
| Msa0758320 | Msa1429420 | 0.807264 | 5.502577e-50 | -8.615850e-47 |
| Msa0758320 | Msa1431000 | 0.810306 | 1.230888e-50 | -8.615850e-47 |
| Msa0758320 | Msa1437190 | 0.848585 | 5.581528e-60 | -8.615850e-47 |
| Msa0758320 | Msa1439960 | 0.815440 | 9.233198e-52 | -8.615850e-47 |
| Msa0758320 | Msa1440340 | 0.826981 | 2.012534e-54 | -8.615850e-47 |
| Msa0758320 | Msa1443840 | 0.880373 | 5.788952e-70 | -8.615850e-47 |
| Msa0758320 | Msa1449730 | 0.820515 | 6.585143e-53 | -8.615850e-47 |
| Msa0758320 | Msa1452060 | 0.874358 | 7.189064e-68 | -8.615850e-47 |
| Msa0758320 | Msa1460380 | 0.870197 | 1.750535e-66 | -8.615850e-47 |
| Msa0758320 | Msa1460890 | 0.815186 | 1.051961e-51 | -8.615850e-47 |
| Msa0120730 | Msa0758320 | 0.806646 | 7.434118e-50 | -8.615850e-47 |
| Msa0130570 | Msa0758320 | 0.808562 | 2.913309e-50 | -8.615850e-47 |
| Msa0141100 | Msa0758320 | 0.892429 | 1.600719e-74 | -8.615850e-47 |
| Msa0148340 | Msa0758320 | 0.809989 | 1.440422e-50 | -8.615850e-47 |
| Msa0149560 | Msa0758320 | 0.807525 | 4.843878e-50 | -8.615850e-47 |
| Msa0153420 | Msa0758320 | 0.817608 | 3.019507e-52 | -8.615850e-47 |
| Msa0156650 | Msa0758320 | -0.800943 | 1.137006e-48 | -8.615850e-47 |
| Msa0157290 | Msa0758320 | 0.822206 | 2.682262e-53 | -8.615850e-47 |
| Msa0172350 | Msa0758320 | 0.811486 | 6.834008e-51 | -8.615850e-47 |
| Msa0173990 | Msa0758320 | 0.807463 | 4.993976e-50 | -8.615850e-47 |
| Msa0183750 | Msa0758320 | 0.856144 | 3.923945e-62 | -8.615850e-47 |
| Msa0185380 | Msa0758320 | 0.813076 | 3.074009e-51 | -8.615850e-47 |
| Msa0185480 | Msa0758320 | 0.805659 | 1.199946e-49 | -8.615850e-47 |
| Msa0191040 | Msa0758320 | 0.857927 | 1.169393e-62 | -8.615850e-47 |
| Msa0206800 | Msa0758320 | 0.803762 | 2.986177e-49 | -8.615850e-47 |
| Msa0208520 | Msa0758320 | 0.811932 | 5.465907e-51 | -8.615850e-47 |
| Msa0220300 | Msa0758320 | 0.866114 | 3.613307e-65 | -8.615850e-47 |
| Msa0225600 | Msa0758320 | 0.845094 | 5.032390e-59 | -8.615850e-47 |
| Msa0233340 | Msa0758320 | 0.858038 | 1.083600e-62 | -8.615850e-47 |
| Msa0236440 | Msa0758320 | 0.821309 | 4.325157e-53 | -8.615850e-47 |
| Msa0371540 | Msa0758320 | 0.807037 | 6.146411e-50 | -8.615850e-47 |
| Msa0374850 | Msa0758320 | 0.895195 | 1.206588e-75 | -8.615850e-47 |
| Msa0375090 | Msa0758320 | 0.894824 | 1.713794e-75 | -8.615850e-47 |
| Msa0385670 | Msa0758320 | 0.834448 | 2.980468e-56 | -8.615850e-47 |
| Msa0419820 | Msa0758320 | 0.830056 | 3.641460e-55 | -8.615850e-47 |
| Msa0423360 | Msa0758320 | -0.822438 | 2.369139e-53 | -8.615850e-47 |
| Msa0435670 | Msa0758320 | 0.842855 | 2.003522e-58 | -8.615850e-47 |
| Msa0436460 | Msa0758320 | 0.809894 | 1.509775e-50 | -8.615850e-47 |
| Msa0466060 | Msa0758320 | 0.807433 | 5.065854e-50 | -8.615850e-47 |
| Msa0470340 | Msa0758320 | 0.898608 | 4.489769e-77 | -8.615850e-47 |
| Msa0470860 | Msa0758320 | 0.867103 | 1.750684e-65 | -8.615850e-47 |
| Msa0479680 | Msa0758320 | 0.825391 | 4.808548e-54 | -8.615850e-47 |
| Msa0479700 | Msa0758320 | 0.816643 | 4.974581e-52 | -8.615850e-47 |
| Msa0480950 | Msa0758320 | 0.886412 | 3.498123e-72 | -8.615850e-47 |
| Msa0481110 | Msa0758320 | 0.821052 | 4.956436e-53 | -8.615850e-47 |
| Msa0251240 | Msa0758320 | 0.854333 | 1.319990e-61 | -8.615850e-47 |
| Msa0257680 | Msa0758320 | 0.806325 | 8.691580e-50 | -8.615850e-47 |
| Msa0266450 | Msa0758320 | 0.845556 | 3.773288e-59 | -8.615850e-47 |
| Msa0267760 | Msa0758320 | 0.807046 | 6.119128e-50 | -8.615850e-47 |
| Msa0271040 | Msa0758320 | 0.809969 | 1.454826e-50 | -8.615850e-47 |
| Msa0282210 | Msa0758320 | 0.807000 | 6.258196e-50 | -8.615850e-47 |
| Msa0288190 | Msa0758320 | 0.808134 | 3.594863e-50 | -8.615850e-47 |
| Msa0309350 | Msa0758320 | 0.816421 | 5.578455e-52 | -8.615850e-47 |
| Msa0311690 | Msa0758320 | 0.851623 | 7.869444e-61 | -8.615850e-47 |
| Msa0315250 | Msa0758320 | 0.842400 | 2.646213e-58 | -8.615850e-47 |
| Msa0326540 | Msa0758320 | 0.819438 | 1.161255e-52 | -8.615850e-47 |
| Msa0334500 | Msa0758320 | 0.803019 | 4.257123e-49 | -8.615850e-47 |
| Msa0335270 | Msa0758320 | 0.801031 | 1.090637e-48 | -8.615850e-47 |
| Msa0484780 | Msa0758320 | 0.809463 | 1.868827e-50 | -8.615850e-47 |
| Msa0508610 | Msa0758320 | 0.800847 | 1.189349e-48 | -8.615850e-47 |
| Msa0508650 | Msa0758320 | 0.804893 | 1.736088e-49 | -8.615850e-47 |
| Msa0517340 | Msa0758320 | 0.809037 | 2.305849e-50 | -8.615850e-47 |
| Msa0520510 | Msa0758320 | 0.802593 | 5.211992e-49 | -8.615850e-47 |
| Msa0526710 | Msa0758320 | 0.804783 | 1.829933e-49 | -8.615850e-47 |
| Msa0531430 | Msa0758320 | 0.908423 | 1.738624e-81 | -8.615850e-47 |
| Msa0534570 | Msa0758320 | 0.847103 | 1.428962e-59 | -8.615850e-47 |
| Msa0534590 | Msa0758320 | 0.905183 | 5.615132e-80 | -8.615850e-47 |
| Msa0548620 | Msa0758320 | 0.816305 | 5.923216e-52 | -8.615850e-47 |
| Msa0548660 | Msa0758320 | 0.812924 | 3.318721e-51 | -8.615850e-47 |
| Msa0557680 | Msa0758320 | 0.802267 | 6.084603e-49 | -8.615850e-47 |
| Msa0565600 | Msa0758320 | 0.870750 | 1.152270e-66 | -8.615850e-47 |
| Msa0568820 | Msa0758320 | 0.822242 | 2.630039e-53 | -8.615850e-47 |
| Msa0581760 | Msa0758320 | 0.800385 | 1.477176e-48 | -8.615850e-47 |
| Msa0590800 | Msa0758320 | 0.899810 | 1.369768e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758320 | MtrunA17_Chr5g0405171 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 5.07e-153 | 422 |
| Msa0758320 | MtrunA17_Chr8g0372141 | 76.410 | 195 | 43 | 3 | 14 | 207 | 1 | 193 | 2.38e-108 | 308 |
| Msa0758320 | MtrunA17_Chr2g0277151 | 53.846 | 182 | 80 | 1 | 25 | 206 | 3 | 180 | 1.81e-66 | 202 |
| Msa0758320 | MtrunA17_Chr4g0063501 | 58.571 | 140 | 54 | 1 | 25 | 164 | 5 | 140 | 1.09e-56 | 177 |
| Msa0758320 | MtrunA17_Chr4g0003581 | 55.479 | 146 | 57 | 2 | 25 | 168 | 9 | 148 | 2.08e-55 | 174 |
| Msa0758320 | MtrunA17_Chr2g0332851 | 54.225 | 142 | 60 | 2 | 25 | 165 | 9 | 146 | 3.24e-51 | 163 |
| Msa0758320 | MtrunA17_Chr2g0332841 | 52.817 | 142 | 62 | 2 | 25 | 165 | 9 | 146 | 3.76e-49 | 157 |
| Msa0758320 | MtrunA17_Chr4g0020201 | 47.333 | 150 | 77 | 2 | 17 | 165 | 26 | 174 | 8.11e-48 | 155 |
| Msa0758320 | MtrunA17_Chr1g0212241 | 46.617 | 133 | 66 | 2 | 42 | 173 | 3 | 131 | 1.79e-39 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758320 | AT1G15380.2 | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.52e-58 | 182 |
| Msa0758320 | AT1G15380.1 | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.52e-58 | 182 |
| Msa0758320 | AT1G80160.1 | 57.639 | 144 | 57 | 2 | 25 | 168 | 9 | 148 | 2.88e-58 | 181 |
| Msa0758320 | AT1G80160.3 | 57.447 | 141 | 56 | 2 | 25 | 165 | 50 | 186 | 1.14e-57 | 181 |
| Msa0758320 | AT2G28420.1 | 52.083 | 144 | 65 | 2 | 26 | 168 | 17 | 157 | 1.39e-52 | 167 |
| Msa0758320 | AT1G80160.2 | 53.000 | 100 | 43 | 2 | 69 | 168 | 27 | 122 | 5.27e-33 | 116 |
Find 44 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTTCTTTCAAATTTAC+TGG | 0.206523 | 5_2:-13530226 | Msa0758320:CDS |
| CATATGGTGTTTAAAATATA+TGG | 0.250719 | 5_2:-13529155 | Msa0758320:three_prime_UTR |
| TGGTTATCCTTGGGATTAAT+AGG | 0.256572 | 5_2:+13530004 | None:intergenic |
| CTCTTAAAGCTATGGCTTCT+AGG | 0.268260 | 5_2:+13529457 | None:intergenic |
| AAGATATGTTGGAGGATATT+AGG | 0.278431 | 5_2:-13529255 | Msa0758320:three_prime_UTR |
| GGTAGAAGATGAAGGAATTA+AGG | 0.296959 | 5_2:-13529584 | Msa0758320:CDS |
| GAGAGAACAAAAGTGGAAAA+TGG | 0.331776 | 5_2:-13530380 | Msa0758320:CDS |
| AAATTTACAATCAATACTTT+TGG | 0.332571 | 5_2:-13529048 | Msa0758320:three_prime_UTR |
| TAAGAAGAGATTAGAAGAAA+AGG | 0.341886 | 5_2:-13529629 | Msa0758320:CDS |
| GAAGCAGTGCATGAAGAAAT+AGG | 0.352827 | 5_2:+13529487 | None:intergenic |
| GAATCCTCCACACTTGGAAT+TGG | 0.363613 | 5_2:+13529426 | None:intergenic |
| CATGAAGAAATAGGAATGAT+TGG | 0.374847 | 5_2:+13529496 | None:intergenic |
| AAGAAGAGATTAGAAGAAAA+GGG | 0.385631 | 5_2:-13529628 | Msa0758320:CDS |
| GAAAGAAGATGGTCGTTTGA+TGG | 0.396618 | 5_2:+13530237 | None:intergenic |
| TGAATTGTATTTGTAACATA+TGG | 0.409819 | 5_2:-13529171 | Msa0758320:three_prime_UTR |
| AGCTCAATCATGTAGCCATC+AGG | 0.416541 | 5_2:+13529538 | None:intergenic |
| GAATGAGATATGGTTATCCT+TGG | 0.430947 | 5_2:+13529994 | None:intergenic |
| GGATAACCATATCTCATTCC+AGG | 0.432811 | 5_2:-13529990 | Msa0758320:intron |
| ATTCATTGAGAGAACAAAAG+TGG | 0.461029 | 5_2:-13530387 | Msa0758320:CDS |
| GTATCAAATTCATCAATGTC+TGG | 0.469039 | 5_2:+13530046 | None:intergenic |
| GAATGTAAAATTGTTAGTCT+TGG | 0.473770 | 5_2:-13529233 | Msa0758320:three_prime_UTR |
| AAAGAAGATGGTCGTTTGAT+GGG | 0.476824 | 5_2:+13530238 | None:intergenic |
| CCAGTAAATTTGAAAGAAGA+TGG | 0.495096 | 5_2:+13530226 | None:intergenic |
| ATGAAGAAATAGGAATGATT+GGG | 0.499317 | 5_2:+13529497 | None:intergenic |
| CTGCATGAATCCTCCACACT+TGG | 0.500461 | 5_2:+13529420 | None:intergenic |
| AATGAGATATGGTTATCCTT+GGG | 0.506176 | 5_2:+13529995 | None:intergenic |
| CTTTCAAATTTACTGGAGCA+TGG | 0.508696 | 5_2:-13530219 | Msa0758320:intron |
| AAGTAGATCTCTTAAAGCTA+TGG | 0.522280 | 5_2:+13529449 | None:intergenic |
| ATTCATGCAGAATGTTATGA+TGG | 0.532345 | 5_2:-13529407 | Msa0758320:CDS |
| AGAGCAGAGTGGTGGGTCCA+AGG | 0.539966 | 5_2:-13529200 | Msa0758320:three_prime_UTR |
| TCATGTAGCCATCAGGGTCA+TGG | 0.545015 | 5_2:+13529545 | None:intergenic |
| AATGAGATATGTTACAGCAT+TGG | 0.548154 | 5_2:-13529605 | Msa0758320:CDS |
| TAATTGTGAGAGCAGAGTGG+TGG | 0.567120 | 5_2:-13529208 | Msa0758320:three_prime_UTR |
| ACAGCATTGGTAGAAGATGA+AGG | 0.580373 | 5_2:-13529592 | Msa0758320:CDS |
| GTGTTCTTCCATGACCCTGA+TGG | 0.589307 | 5_2:-13529553 | Msa0758320:CDS |
| ACATGATTCAATGAGAGCAA+TGG | 0.593307 | 5_2:+13530325 | None:intergenic |
| AACGAGGCCTATTAATCCCA+AGG | 0.600112 | 5_2:-13530011 | Msa0758320:CDS |
| GCTCAATCATGTAGCCATCA+GGG | 0.602960 | 5_2:+13529539 | None:intergenic |
| TCTACTTCCAATTCCAAGTG+TGG | 0.614729 | 5_2:-13529433 | Msa0758320:CDS |
| AATTGTGAGAGCAGAGTGGT+GGG | 0.617021 | 5_2:-13529207 | Msa0758320:three_prime_UTR |
| ACTTCCAATTCCAAGTGTGG+AGG | 0.621587 | 5_2:-13529430 | Msa0758320:CDS |
| TATGATGGAAAGCTTGAGCA+TGG | 0.636263 | 5_2:-13529392 | Msa0758320:CDS |
| GTTTAATTGTGAGAGCAGAG+TGG | 0.701131 | 5_2:-13529211 | Msa0758320:three_prime_UTR |
| ATACTTACATGAATGAAACG+AGG | 0.744566 | 5_2:-13530027 | Msa0758320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTATTTTTTTATATTTT+TGG | - | chr5_2:13529236-13529255 | Msa0758320:three_prime_UTR | 10.0% |
| !! | TATCTTATATAACAAAAAAA+AGG | + | chr5_2:13530120-13530139 | None:intergenic | 10.0% |
| !! | AAAAAGTTAGTATATTTATA+AGG | + | chr5_2:13530318-13530337 | None:intergenic | 10.0% |
| !!! | AGCTTATTTTTTTATATTTT+TGG | - | chr5_2:13529236-13529255 | Msa0758320:three_prime_UTR | 10.0% |
| !! | TATCTTATATAACAAAAAAA+AGG | + | chr5_2:13530120-13530139 | None:intergenic | 10.0% |
| !! | AAAAAGTTAGTATATTTATA+AGG | + | chr5_2:13530318-13530337 | None:intergenic | 10.0% |
| !!! | TATAAATCTTTATTTTTACC+TGG | + | chr5_2:13529461-13529480 | None:intergenic | 15.0% |
| !!! | AATATAGTCATTTTTTGAAA+TGG | - | chr5_2:13529490-13529509 | Msa0758320:CDS | 15.0% |
| !!! | CCATATTGTATATAAATTTT+TGG | + | chr5_2:13529751-13529770 | None:intergenic | 15.0% |
| !! | CCAAAAATTTATATACAATA+TGG | - | chr5_2:13529748-13529767 | Msa0758320:intron | 15.0% |
| !! | AACAAAAAAAAAAGATATGT+TGG | - | chr5_2:13530164-13530183 | Msa0758320:intron | 15.0% |
| !!! | TATATGGTTAAATATGTTTT+TGG | - | chr5_2:13530291-13530310 | Msa0758320:CDS | 15.0% |
| !!! | TATTGATTGTAAATTTTACA+TGG | + | chr5_2:13530378-13530397 | None:intergenic | 15.0% |
| !!! | AAATTTACAATCAATACTTT+TGG | - | chr5_2:13530382-13530401 | Msa0758320:CDS | 15.0% |
| !!! | TATAAATCTTTATTTTTACC+TGG | + | chr5_2:13529461-13529480 | None:intergenic | 15.0% |
| !!! | AATATAGTCATTTTTTGAAA+TGG | - | chr5_2:13529490-13529509 | Msa0758320:CDS | 15.0% |
| !!! | CCATATTGTATATAAATTTT+TGG | + | chr5_2:13529751-13529770 | None:intergenic | 15.0% |
| !! | CCAAAAATTTATATACAATA+TGG | - | chr5_2:13529748-13529767 | Msa0758320:intron | 15.0% |
| !! | AACAAAAAAAAAAGATATGT+TGG | - | chr5_2:13530164-13530183 | Msa0758320:intron | 15.0% |
| !!! | TATATGGTTAAATATGTTTT+TGG | - | chr5_2:13530291-13530310 | Msa0758320:CDS | 15.0% |
| !!! | TATTGATTGTAAATTTTACA+TGG | + | chr5_2:13530378-13530397 | None:intergenic | 15.0% |
| !!! | AAATTTACAATCAATACTTT+TGG | - | chr5_2:13530382-13530401 | Msa0758320:CDS | 15.0% |
| !!! | TTTTGCAGGTTTTATAATTA+TGG | - | chr5_2:13529336-13529355 | Msa0758320:three_prime_UTR | 20.0% |
| !!! | AGGTTTTATAATTATGGTAT+TGG | - | chr5_2:13529342-13529361 | Msa0758320:three_prime_UTR | 20.0% |
| !! | GCACATAATAATTATAACAA+AGG | + | chr5_2:13529652-13529671 | None:intergenic | 20.0% |
| !! | TGTTATAATTATTATGTGCA+TGG | - | chr5_2:13529653-13529672 | Msa0758320:intron | 20.0% |
| !! | AAAAAAAAAAGATATGTTGG+AGG | - | chr5_2:13530167-13530186 | Msa0758320:intron | 20.0% |
| !! | TGAATTGTATTTGTAACATA+TGG | - | chr5_2:13530259-13530278 | Msa0758320:CDS | 20.0% |
| !!! | CATATGGTGTTTAAAATATA+TGG | - | chr5_2:13530275-13530294 | Msa0758320:CDS | 20.0% |
| !!! | TTTTGCAGGTTTTATAATTA+TGG | - | chr5_2:13529336-13529355 | Msa0758320:three_prime_UTR | 20.0% |
| !!! | AGGTTTTATAATTATGGTAT+TGG | - | chr5_2:13529342-13529361 | Msa0758320:three_prime_UTR | 20.0% |
| !! | GCACATAATAATTATAACAA+AGG | + | chr5_2:13529652-13529671 | None:intergenic | 20.0% |
| !! | TGTTATAATTATTATGTGCA+TGG | - | chr5_2:13529653-13529672 | Msa0758320:intron | 20.0% |
| !! | AAAAAAAAAAGATATGTTGG+AGG | - | chr5_2:13530167-13530186 | Msa0758320:intron | 20.0% |
| !! | TGAATTGTATTTGTAACATA+TGG | - | chr5_2:13530259-13530278 | Msa0758320:CDS | 20.0% |
| !!! | CATATGGTGTTTAAAATATA+TGG | - | chr5_2:13530275-13530294 | Msa0758320:CDS | 20.0% |
| !! | CAATTTTATGAGGATGTTTT+GGG | - | chr5_2:13529162-13529181 | Msa0758320:three_prime_UTR | 25.0% |
| !!! | GCTTTTAACTTTTTTTTTGC+AGG | - | chr5_2:13529322-13529341 | Msa0758320:three_prime_UTR | 25.0% |
| !!! | GTCATTTTTTGAAATGGTTA+TGG | - | chr5_2:13529496-13529515 | Msa0758320:CDS | 25.0% |
| ! | TAAGTAAATAATTAACCGCA+TGG | - | chr5_2:13529685-13529704 | Msa0758320:intron | 25.0% |
| ! | TAAGAAGAGATTAGAAGAAA+AGG | - | chr5_2:13529801-13529820 | Msa0758320:intron | 25.0% |
| ! | AAGAAGAGATTAGAAGAAAA+GGG | - | chr5_2:13529802-13529821 | Msa0758320:intron | 25.0% |
| ! | ATGAAGAAATAGGAATGATT+GGG | + | chr5_2:13529936-13529955 | None:intergenic | 25.0% |
| !! | GAATGTAAAATTGTTAGTCT+TGG | - | chr5_2:13530197-13530216 | Msa0758320:intron | 25.0% |
| !! | AATACAATTCAACTTTTCCT+TGG | + | chr5_2:13530250-13530269 | None:intergenic | 25.0% |
| !! | CAATTTTATGAGGATGTTTT+GGG | - | chr5_2:13529162-13529181 | Msa0758320:three_prime_UTR | 25.0% |
| !!! | GCTTTTAACTTTTTTTTTGC+AGG | - | chr5_2:13529322-13529341 | Msa0758320:three_prime_UTR | 25.0% |
| !!! | GTCATTTTTTGAAATGGTTA+TGG | - | chr5_2:13529496-13529515 | Msa0758320:CDS | 25.0% |
| ! | TAAGTAAATAATTAACCGCA+TGG | - | chr5_2:13529685-13529704 | Msa0758320:intron | 25.0% |
| ! | TAAGAAGAGATTAGAAGAAA+AGG | - | chr5_2:13529801-13529820 | Msa0758320:intron | 25.0% |
| ! | AAGAAGAGATTAGAAGAAAA+GGG | - | chr5_2:13529802-13529821 | Msa0758320:intron | 25.0% |
| ! | ATGAAGAAATAGGAATGATT+GGG | + | chr5_2:13529936-13529955 | None:intergenic | 25.0% |
| !! | GAATGTAAAATTGTTAGTCT+TGG | - | chr5_2:13530197-13530216 | Msa0758320:intron | 25.0% |
| !! | AATACAATTCAACTTTTCCT+TGG | + | chr5_2:13530250-13530269 | None:intergenic | 25.0% |
| ATTCATTGAGAGAACAAAAG+TGG | - | chr5_2:13529043-13529062 | Msa0758320:three_prime_UTR | 30.0% | |
| ! | GGAATCTATGCAATTTTATG+AGG | - | chr5_2:13529152-13529171 | Msa0758320:three_prime_UTR | 30.0% |
| ! | GCAATTTTATGAGGATGTTT+TGG | - | chr5_2:13529161-13529180 | Msa0758320:three_prime_UTR | 30.0% |
| CCAGTAAATTTGAAAGAAGA+TGG | + | chr5_2:13529207-13529226 | None:intergenic | 30.0% | |
| CCATCTTCTTTCAAATTTAC+TGG | - | chr5_2:13529204-13529223 | Msa0758320:three_prime_UTR | 30.0% | |
| GTATCAAATTCATCAATGTC+TGG | + | chr5_2:13529387-13529406 | None:intergenic | 30.0% | |
| ATACTTACATGAATGAAACG+AGG | - | chr5_2:13529403-13529422 | Msa0758320:CDS | 30.0% | |
| AATGAGATATGGTTATCCTT+GGG | + | chr5_2:13529438-13529457 | None:intergenic | 30.0% | |
| ! | TTTTTACCTGGAATGAGATA+TGG | + | chr5_2:13529449-13529468 | None:intergenic | 30.0% |
| ATGGAAATCTATGCATATGT+AGG | - | chr5_2:13529550-13529569 | Msa0758320:CDS | 30.0% | |
| TGGAAATCTATGCATATGTA+GGG | - | chr5_2:13529551-13529570 | Msa0758320:CDS | 30.0% | |
| !!! | ATATGGTTTTTTGCAGTGTA+CGG | - | chr5_2:13529765-13529784 | Msa0758320:intron | 30.0% |
| AATGAGATATGTTACAGCAT+TGG | - | chr5_2:13529825-13529844 | Msa0758320:intron | 30.0% | |
| CATGAAGAAATAGGAATGAT+TGG | + | chr5_2:13529937-13529956 | None:intergenic | 30.0% | |
| AAGTAGATCTCTTAAAGCTA+TGG | + | chr5_2:13529984-13530003 | None:intergenic | 30.0% | |
| ATTCATGCAGAATGTTATGA+TGG | - | chr5_2:13530023-13530042 | Msa0758320:CDS | 30.0% | |
| AAGATATGTTGGAGGATATT+AGG | - | chr5_2:13530175-13530194 | Msa0758320:intron | 30.0% | |
| ATTCATTGAGAGAACAAAAG+TGG | - | chr5_2:13529043-13529062 | Msa0758320:three_prime_UTR | 30.0% | |
| ! | GGAATCTATGCAATTTTATG+AGG | - | chr5_2:13529152-13529171 | Msa0758320:three_prime_UTR | 30.0% |
| ! | GCAATTTTATGAGGATGTTT+TGG | - | chr5_2:13529161-13529180 | Msa0758320:three_prime_UTR | 30.0% |
| CCAGTAAATTTGAAAGAAGA+TGG | + | chr5_2:13529207-13529226 | None:intergenic | 30.0% | |
| CCATCTTCTTTCAAATTTAC+TGG | - | chr5_2:13529204-13529223 | Msa0758320:three_prime_UTR | 30.0% | |
| GTATCAAATTCATCAATGTC+TGG | + | chr5_2:13529387-13529406 | None:intergenic | 30.0% | |
| ATACTTACATGAATGAAACG+AGG | - | chr5_2:13529403-13529422 | Msa0758320:CDS | 30.0% | |
| AATGAGATATGGTTATCCTT+GGG | + | chr5_2:13529438-13529457 | None:intergenic | 30.0% | |
| ! | TTTTTACCTGGAATGAGATA+TGG | + | chr5_2:13529449-13529468 | None:intergenic | 30.0% |
| ATGGAAATCTATGCATATGT+AGG | - | chr5_2:13529550-13529569 | Msa0758320:CDS | 30.0% | |
| TGGAAATCTATGCATATGTA+GGG | - | chr5_2:13529551-13529570 | Msa0758320:CDS | 30.0% | |
| !!! | ATATGGTTTTTTGCAGTGTA+CGG | - | chr5_2:13529765-13529784 | Msa0758320:intron | 30.0% |
| AATGAGATATGTTACAGCAT+TGG | - | chr5_2:13529825-13529844 | Msa0758320:intron | 30.0% | |
| CATGAAGAAATAGGAATGAT+TGG | + | chr5_2:13529937-13529956 | None:intergenic | 30.0% | |
| AAGTAGATCTCTTAAAGCTA+TGG | + | chr5_2:13529984-13530003 | None:intergenic | 30.0% | |
| ATTCATGCAGAATGTTATGA+TGG | - | chr5_2:13530023-13530042 | Msa0758320:CDS | 30.0% | |
| AAGATATGTTGGAGGATATT+AGG | - | chr5_2:13530175-13530194 | Msa0758320:intron | 30.0% | |
| GAGAGAACAAAAGTGGAAAA+TGG | - | chr5_2:13529050-13529069 | Msa0758320:three_prime_UTR | 35.0% | |
| ACATGATTCAATGAGAGCAA+TGG | + | chr5_2:13529108-13529127 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTAGATCAGTGT+TGG | - | chr5_2:13529131-13529150 | Msa0758320:three_prime_UTR | 35.0% |
| AAAGAAGATGGTCGTTTGAT+GGG | + | chr5_2:13529195-13529214 | None:intergenic | 35.0% | |
| CTTTCAAATTTACTGGAGCA+TGG | - | chr5_2:13529211-13529230 | Msa0758320:three_prime_UTR | 35.0% | |
| TGGTTATCCTTGGGATTAAT+AGG | + | chr5_2:13529429-13529448 | None:intergenic | 35.0% | |
| GAATGAGATATGGTTATCCT+TGG | + | chr5_2:13529439-13529458 | None:intergenic | 35.0% | |
| AGCTAAATTTGTGATCCATG+CGG | + | chr5_2:13529703-13529722 | None:intergenic | 35.0% | |
| GGTAGAAGATGAAGGAATTA+AGG | - | chr5_2:13529846-13529865 | Msa0758320:intron | 35.0% | |
| GAGAGAACAAAAGTGGAAAA+TGG | - | chr5_2:13529050-13529069 | Msa0758320:three_prime_UTR | 35.0% | |
| ACATGATTCAATGAGAGCAA+TGG | + | chr5_2:13529108-13529127 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTAGATCAGTGT+TGG | - | chr5_2:13529131-13529150 | Msa0758320:three_prime_UTR | 35.0% |
| AAAGAAGATGGTCGTTTGAT+GGG | + | chr5_2:13529195-13529214 | None:intergenic | 35.0% | |
| CTTTCAAATTTACTGGAGCA+TGG | - | chr5_2:13529211-13529230 | Msa0758320:three_prime_UTR | 35.0% | |
| TGGTTATCCTTGGGATTAAT+AGG | + | chr5_2:13529429-13529448 | None:intergenic | 35.0% | |
| GAATGAGATATGGTTATCCT+TGG | + | chr5_2:13529439-13529458 | None:intergenic | 35.0% | |
| AGCTAAATTTGTGATCCATG+CGG | + | chr5_2:13529703-13529722 | None:intergenic | 35.0% | |
| GGTAGAAGATGAAGGAATTA+AGG | - | chr5_2:13529846-13529865 | Msa0758320:intron | 35.0% | |
| GAAAGAAGATGGTCGTTTGA+TGG | + | chr5_2:13529196-13529215 | None:intergenic | 40.0% | |
| GGATAACCATATCTCATTCC+AGG | - | chr5_2:13529440-13529459 | Msa0758320:CDS | 40.0% | |
| !! | ACAGCATTGGTAGAAGATGA+AGG | - | chr5_2:13529838-13529857 | Msa0758320:intron | 40.0% |
| GAAGCAGTGCATGAAGAAAT+AGG | + | chr5_2:13529946-13529965 | None:intergenic | 40.0% | |
| CTCTTAAAGCTATGGCTTCT+AGG | + | chr5_2:13529976-13529995 | None:intergenic | 40.0% | |
| TCTACTTCCAATTCCAAGTG+TGG | - | chr5_2:13529997-13530016 | Msa0758320:CDS | 40.0% | |
| ! | TATGATGGAAAGCTTGAGCA+TGG | - | chr5_2:13530038-13530057 | Msa0758320:CDS | 40.0% |
| GTTTAATTGTGAGAGCAGAG+TGG | - | chr5_2:13530219-13530238 | Msa0758320:intron | 40.0% | |
| GAAAGAAGATGGTCGTTTGA+TGG | + | chr5_2:13529196-13529215 | None:intergenic | 40.0% | |
| GGATAACCATATCTCATTCC+AGG | - | chr5_2:13529440-13529459 | Msa0758320:CDS | 40.0% | |
| !! | ACAGCATTGGTAGAAGATGA+AGG | - | chr5_2:13529838-13529857 | Msa0758320:intron | 40.0% |
| GAAGCAGTGCATGAAGAAAT+AGG | + | chr5_2:13529946-13529965 | None:intergenic | 40.0% | |
| CTCTTAAAGCTATGGCTTCT+AGG | + | chr5_2:13529976-13529995 | None:intergenic | 40.0% | |
| TCTACTTCCAATTCCAAGTG+TGG | - | chr5_2:13529997-13530016 | Msa0758320:CDS | 40.0% | |
| ! | TATGATGGAAAGCTTGAGCA+TGG | - | chr5_2:13530038-13530057 | Msa0758320:CDS | 40.0% |
| GTTTAATTGTGAGAGCAGAG+TGG | - | chr5_2:13530219-13530238 | Msa0758320:intron | 40.0% | |
| AACGAGGCCTATTAATCCCA+AGG | - | chr5_2:13529419-13529438 | Msa0758320:CDS | 45.0% | |
| GCTCAATCATGTAGCCATCA+GGG | + | chr5_2:13529894-13529913 | None:intergenic | 45.0% | |
| AGCTCAATCATGTAGCCATC+AGG | + | chr5_2:13529895-13529914 | None:intergenic | 45.0% | |
| ACTTCCAATTCCAAGTGTGG+AGG | - | chr5_2:13530000-13530019 | Msa0758320:CDS | 45.0% | |
| GAATCCTCCACACTTGGAAT+TGG | + | chr5_2:13530007-13530026 | None:intergenic | 45.0% | |
| TAATTGTGAGAGCAGAGTGG+TGG | - | chr5_2:13530222-13530241 | Msa0758320:CDS | 45.0% | |
| AATTGTGAGAGCAGAGTGGT+GGG | - | chr5_2:13530223-13530242 | Msa0758320:CDS | 45.0% | |
| AACGAGGCCTATTAATCCCA+AGG | - | chr5_2:13529419-13529438 | Msa0758320:CDS | 45.0% | |
| GCTCAATCATGTAGCCATCA+GGG | + | chr5_2:13529894-13529913 | None:intergenic | 45.0% | |
| AGCTCAATCATGTAGCCATC+AGG | + | chr5_2:13529895-13529914 | None:intergenic | 45.0% | |
| ACTTCCAATTCCAAGTGTGG+AGG | - | chr5_2:13530000-13530019 | Msa0758320:CDS | 45.0% | |
| GAATCCTCCACACTTGGAAT+TGG | + | chr5_2:13530007-13530026 | None:intergenic | 45.0% | |
| TAATTGTGAGAGCAGAGTGG+TGG | - | chr5_2:13530222-13530241 | Msa0758320:CDS | 45.0% | |
| AATTGTGAGAGCAGAGTGGT+GGG | - | chr5_2:13530223-13530242 | Msa0758320:CDS | 45.0% | |
| !! | ATAAATTTATATACTAAAAA+TGG | - | chr5_2:13529531-13529550 | Msa0758320:CDS | 5.0% |
| !! | AAAAAATATAGTTAAAAATA+GGG | + | chr5_2:13530409-13530428 | None:intergenic | 5.0% |
| !! | AAAAAAATATAGTTAAAAAT+AGG | + | chr5_2:13530410-13530429 | None:intergenic | 5.0% |
| !! | ATAAATTTATATACTAAAAA+TGG | - | chr5_2:13529531-13529550 | Msa0758320:CDS | 5.0% |
| !! | AAAAAATATAGTTAAAAATA+GGG | + | chr5_2:13530409-13530428 | None:intergenic | 5.0% |
| !! | AAAAAAATATAGTTAAAAAT+AGG | + | chr5_2:13530410-13530429 | None:intergenic | 5.0% |
| GTGTTCTTCCATGACCCTGA+TGG | - | chr5_2:13529877-13529896 | Msa0758320:intron | 50.0% | |
| TCATGTAGCCATCAGGGTCA+TGG | + | chr5_2:13529888-13529907 | None:intergenic | 50.0% | |
| CTGCATGAATCCTCCACACT+TGG | + | chr5_2:13530013-13530032 | None:intergenic | 50.0% | |
| GTGTTCTTCCATGACCCTGA+TGG | - | chr5_2:13529877-13529896 | Msa0758320:intron | 50.0% | |
| TCATGTAGCCATCAGGGTCA+TGG | + | chr5_2:13529888-13529907 | None:intergenic | 50.0% | |
| CTGCATGAATCCTCCACACT+TGG | + | chr5_2:13530013-13530032 | None:intergenic | 50.0% | |
| !! | AGAGCAGAGTGGTGGGTCCA+AGG | - | chr5_2:13530230-13530249 | Msa0758320:CDS | 60.0% |
| !! | AGAGCAGAGTGGTGGGTCCA+AGG | - | chr5_2:13530230-13530249 | Msa0758320:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 13529004 | 13530448 | 13529004 | ID=Msa0758320;Name=Msa0758320 |
| chr5_2 | mRNA | 13529004 | 13530448 | 13529004 | ID=Msa0758320-mRNA-1;Parent=Msa0758320;Name=Msa0758320-mRNA-1;_AED=0.10;_eAED=0.10;_QI=26|1|1|1|1|1|3|365|207 |
| chr5_2 | exon | 13529004 | 13529671 | 13529004 | ID=Msa0758320-mRNA-1:exon:6074;Parent=Msa0758320-mRNA-1 |
| chr5_2 | exon | 13529991 | 13530108 | 13529991 | ID=Msa0758320-mRNA-1:exon:6073;Parent=Msa0758320-mRNA-1 |
| chr5_2 | exon | 13530220 | 13530448 | 13530220 | ID=Msa0758320-mRNA-1:exon:6072;Parent=Msa0758320-mRNA-1 |
| chr5_2 | five_prime_UTR | 13530423 | 13530448 | 13530423 | ID=Msa0758320-mRNA-1:five_prime_utr;Parent=Msa0758320-mRNA-1 |
| chr5_2 | CDS | 13530220 | 13530422 | 13530220 | ID=Msa0758320-mRNA-1:cds;Parent=Msa0758320-mRNA-1 |
| chr5_2 | CDS | 13529991 | 13530108 | 13529991 | ID=Msa0758320-mRNA-1:cds;Parent=Msa0758320-mRNA-1 |
| chr5_2 | CDS | 13529369 | 13529671 | 13529369 | ID=Msa0758320-mRNA-1:cds;Parent=Msa0758320-mRNA-1 |
| chr5_2 | three_prime_UTR | 13529004 | 13529368 | 13529004 | ID=Msa0758320-mRNA-1:three_prime_utr;Parent=Msa0758320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
