Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241610 | XP_013463044.1 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241610 | sp|Q94C59|PATL4_ARATH | 68.713 | 342 | 100 | 3 | 122 | 463 | 200 | 534 | 2.65e-176 | 508 |
| Msa0241610 | sp|Q94C59|PATL4_ARATH | 45.283 | 106 | 51 | 2 | 1 | 100 | 1 | 105 | 3.30e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241610 | A0A072V4Y7 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000320 | Msa0241610 | 0.821029 | 5.015455e-53 | -8.615850e-47 |
| Msa0001940 | Msa0241610 | 0.821383 | 4.156325e-53 | -8.615850e-47 |
| Msa0005890 | Msa0241610 | 0.818676 | 1.730984e-52 | -8.615850e-47 |
| Msa0017930 | Msa0241610 | 0.803994 | 2.672315e-49 | -8.615850e-47 |
| Msa0017950 | Msa0241610 | 0.828921 | 6.871492e-55 | -8.615850e-47 |
| Msa0041850 | Msa0241610 | 0.833818 | 4.285671e-56 | -8.615850e-47 |
| Msa0048510 | Msa0241610 | 0.833749 | 4.458788e-56 | -8.615850e-47 |
| Msa0054690 | Msa0241610 | 0.808446 | 3.085457e-50 | -8.615850e-47 |
| Msa0077340 | Msa0241610 | 0.853333 | 2.560482e-61 | -8.615850e-47 |
| Msa0077560 | Msa0241610 | 0.858498 | 7.907552e-63 | -8.615850e-47 |
| Msa0081980 | Msa0241610 | 0.833016 | 6.794520e-56 | -8.615850e-47 |
| Msa0082020 | Msa0241610 | 0.831543 | 1.572873e-55 | -8.615850e-47 |
| Msa0089980 | Msa0241610 | 0.803862 | 2.846156e-49 | -8.615850e-47 |
| Msa0090010 | Msa0241610 | 0.804938 | 1.698376e-49 | -8.615850e-47 |
| Msa0094780 | Msa0241610 | 0.859900 | 3.002331e-63 | -8.615850e-47 |
| Msa0094790 | Msa0241610 | 0.814619 | 1.404615e-51 | -8.615850e-47 |
| Msa0123070 | Msa0241610 | 0.826638 | 2.430583e-54 | -8.615850e-47 |
| Msa0125360 | Msa0241610 | 0.833034 | 6.724204e-56 | -8.615850e-47 |
| Msa0128460 | Msa0241610 | 0.830392 | 3.013998e-55 | -8.615850e-47 |
| Msa0140280 | Msa0241610 | 0.802689 | 4.980486e-49 | -8.615850e-47 |
| Msa0174290 | Msa0241610 | 0.823520 | 1.325553e-53 | -8.615850e-47 |
| Msa0175930 | Msa0241610 | 0.803200 | 3.905465e-49 | -8.615850e-47 |
| Msa0179130 | Msa0241610 | 0.827176 | 1.807490e-54 | -8.615850e-47 |
| Msa0181650 | Msa0241610 | 0.811205 | 7.864108e-51 | -8.615850e-47 |
| Msa0190570 | Msa0241610 | 0.809736 | 1.633194e-50 | -8.615850e-47 |
| Msa0190730 | Msa0241610 | 0.811601 | 6.454028e-51 | -8.615850e-47 |
| Msa0198820 | Msa0241610 | 0.835328 | 1.788449e-56 | -8.615850e-47 |
| Msa0204950 | Msa0241610 | 0.804579 | 2.018451e-49 | -8.615850e-47 |
| Msa0225480 | Msa0241610 | 0.811176 | 7.979397e-51 | -8.615850e-47 |
| Msa0225860 | Msa0241610 | 0.819197 | 1.318070e-52 | -8.615850e-47 |
| Msa0241610 | Msa0242590 | 0.832054 | 1.176500e-55 | -8.615850e-47 |
| Msa0241610 | Msa0249850 | 0.820712 | 5.932540e-53 | -8.615850e-47 |
| Msa0241610 | Msa0260510 | 0.834408 | 3.048874e-56 | -8.615850e-47 |
| Msa0241610 | Msa0263230 | 0.814977 | 1.170341e-51 | -8.615850e-47 |
| Msa0241610 | Msa0269210 | 0.840578 | 7.993570e-58 | -8.615850e-47 |
| Msa0241610 | Msa0271880 | 0.801992 | 6.931761e-49 | -8.615850e-47 |
| Msa0241610 | Msa0279690 | 0.891733 | 3.032633e-74 | -8.615850e-47 |
| Msa0241610 | Msa0280790 | 0.814641 | 1.389048e-51 | -8.615850e-47 |
| Msa0241610 | Msa0281470 | 0.813492 | 2.490659e-51 | -8.615850e-47 |
| Msa0241610 | Msa0307270 | 0.831882 | 1.297194e-55 | -8.615850e-47 |
| Msa0241610 | Msa0307670 | 0.814535 | 1.466617e-51 | -8.615850e-47 |
| Msa0241610 | Msa0310850 | 0.802567 | 5.277990e-49 | -8.615850e-47 |
| Msa0241610 | Msa0317870 | 0.849377 | 3.362684e-60 | -8.615850e-47 |
| Msa0241610 | Msa0320600 | 0.805080 | 1.586805e-49 | -8.615850e-47 |
| Msa0241610 | Msa0327670 | 0.831279 | 1.827015e-55 | -8.615850e-47 |
| Msa0241610 | Msa0330380 | 0.816802 | 4.582339e-52 | -8.615850e-47 |
| Msa0241610 | Msa0361910 | 0.841863 | 3.670818e-58 | -8.615850e-47 |
| Msa0241610 | Msa0367690 | 0.810694 | 1.014986e-50 | -8.615850e-47 |
| Msa0241610 | Msa0369790 | 0.813420 | 2.582528e-51 | -8.615850e-47 |
| Msa0241610 | Msa0377710 | 0.801214 | 1.000453e-48 | -8.615850e-47 |
| Msa0241610 | Msa0409830 | 0.840740 | 7.250059e-58 | -8.615850e-47 |
| Msa0241610 | Msa0417970 | 0.805922 | 1.056204e-49 | -8.615850e-47 |
| Msa0241610 | Msa0419540 | 0.818768 | 1.649532e-52 | -8.615850e-47 |
| Msa0241610 | Msa0436330 | 0.800620 | 1.323203e-48 | -8.615850e-47 |
| Msa0241610 | Msa0464000 | 0.813257 | 2.805598e-51 | -8.615850e-47 |
| Msa0241610 | Msa0465530 | 0.814203 | 1.736493e-51 | -8.615850e-47 |
| Msa0241610 | Msa0481890 | 0.829299 | 5.562693e-55 | -8.615850e-47 |
| Msa0241610 | Msa0483100 | 0.828927 | 6.848626e-55 | -8.615850e-47 |
| Msa0241610 | Msa0500650 | 0.827126 | 1.857784e-54 | -8.615850e-47 |
| Msa0241610 | Msa0502510 | 0.814001 | 1.923948e-51 | -8.615850e-47 |
| Msa0241610 | Msa0508390 | 0.824827 | 6.537089e-54 | -8.615850e-47 |
| Msa0241610 | Msa0509550 | 0.814463 | 1.520772e-51 | -8.615850e-47 |
| Msa0241610 | Msa0519760 | 0.856379 | 3.347506e-62 | -8.615850e-47 |
| Msa0241610 | Msa0519810 | 0.837149 | 6.162205e-57 | -8.615850e-47 |
| Msa0241610 | Msa0519840 | 0.856791 | 2.533002e-62 | -8.615850e-47 |
| Msa0241610 | Msa0529030 | 0.845498 | 3.911454e-59 | -8.615850e-47 |
| Msa0241610 | Msa0534720 | 0.819476 | 1.138163e-52 | -8.615850e-47 |
| Msa0241610 | Msa0555860 | -0.859487 | 3.997042e-63 | -8.615850e-47 |
| Msa0241610 | Msa0567170 | 0.826511 | 2.606135e-54 | -8.615850e-47 |
| Msa0241610 | Msa0571290 | 0.840452 | 8.623723e-58 | -8.615850e-47 |
| Msa0241610 | Msa0580370 | 0.835558 | 1.564885e-56 | -8.615850e-47 |
| Msa0241610 | Msa0581470 | 0.824580 | 7.472406e-54 | -8.615850e-47 |
| Msa0241610 | Msa0590640 | 0.807693 | 4.463266e-50 | -8.615850e-47 |
| Msa0241610 | Msa0609490 | -0.828218 | 1.015994e-54 | -8.615850e-47 |
| Msa0241610 | Msa0611210 | 0.802547 | 5.327020e-49 | -8.615850e-47 |
| Msa0241610 | Msa0624900 | 0.835412 | 1.703136e-56 | -8.615850e-47 |
| Msa0241610 | Msa0626460 | 0.812216 | 4.741000e-51 | -8.615850e-47 |
| Msa0241610 | Msa0630940 | 0.810096 | 1.365721e-50 | -8.615850e-47 |
| Msa0241610 | Msa0641990 | 0.812093 | 5.041717e-51 | -8.615850e-47 |
| Msa0241610 | Msa0652770 | 0.841787 | 3.844577e-58 | -8.615850e-47 |
| Msa0241610 | Msa0658640 | 0.832059 | 1.173130e-55 | -8.615850e-47 |
| Msa0241610 | Msa0666700 | 0.801443 | 8.982771e-49 | -8.615850e-47 |
| Msa0241610 | Msa0669170 | 0.809425 | 1.904428e-50 | -8.615850e-47 |
| Msa0241610 | Msa0693340 | -0.830494 | 2.844918e-55 | -8.615850e-47 |
| Msa0241610 | Msa0702720 | 0.802902 | 4.499415e-49 | -8.615850e-47 |
| Msa0241610 | Msa0703600 | 0.829532 | 4.883530e-55 | -8.615850e-47 |
| Msa0241610 | Msa0706760 | 0.809661 | 1.694940e-50 | -8.615850e-47 |
| Msa0241610 | Msa0709200 | 0.830033 | 3.688441e-55 | -8.615850e-47 |
| Msa0241610 | Msa0709440 | 0.834102 | 3.639157e-56 | -8.615850e-47 |
| Msa0241610 | Msa0716890 | 0.809508 | 1.827741e-50 | -8.615850e-47 |
| Msa0241610 | Msa0720410 | 0.805303 | 1.424571e-49 | -8.615850e-47 |
| Msa0241610 | Msa0721080 | 0.815482 | 9.037809e-52 | -8.615850e-47 |
| Msa0241610 | Msa0735780 | 0.833454 | 5.284534e-56 | -8.615850e-47 |
| Msa0241610 | Msa0754430 | 0.808837 | 2.545063e-50 | -8.615850e-47 |
| Msa0241610 | Msa0754450 | 0.819875 | 9.228613e-53 | -8.615850e-47 |
| Msa0241610 | Msa0792370 | 0.805963 | 1.035428e-49 | -8.615850e-47 |
| Msa0241610 | Msa0795870 | 0.839077 | 1.965709e-57 | -8.615850e-47 |
| Msa0241610 | Msa0815970 | 0.803774 | 2.969645e-49 | -8.615850e-47 |
| Msa0241610 | Msa0824450 | 0.816111 | 6.543890e-52 | -8.615850e-47 |
| Msa0241610 | Msa0828970 | 0.804801 | 1.814751e-49 | -8.615850e-47 |
| Msa0241610 | Msa0833650 | 0.838580 | 2.642460e-57 | -8.615850e-47 |
| Msa0241610 | Msa0878280 | 0.839169 | 1.860763e-57 | -8.615850e-47 |
| Msa0241610 | Msa0921000 | 0.801504 | 8.728375e-49 | -8.615850e-47 |
| Msa0241610 | Msa0945190 | 0.835346 | 1.769957e-56 | -8.615850e-47 |
| Msa0241610 | Msa0980290 | 0.800914 | 1.152268e-48 | -8.615850e-47 |
| Msa0241610 | Msa1051900 | 0.802868 | 4.572536e-49 | -8.615850e-47 |
| Msa0241610 | Msa1070150 | 0.804437 | 2.160916e-49 | -8.615850e-47 |
| Msa0241610 | Msa1072940 | 0.819334 | 1.226844e-52 | -8.615850e-47 |
| Msa0241610 | Msa1074900 | 0.815000 | 1.156944e-51 | -8.615850e-47 |
| Msa0241610 | Msa1084530 | 0.831501 | 1.611047e-55 | -8.615850e-47 |
| Msa0241610 | Msa1085330 | 0.853076 | 3.035400e-61 | -8.615850e-47 |
| Msa0241610 | Msa1116400 | 0.803099 | 4.097570e-49 | -8.615850e-47 |
| Msa0241610 | Msa1123210 | 0.817810 | 2.718971e-52 | -8.615850e-47 |
| Msa0241610 | Msa1125820 | 0.824286 | 8.764122e-54 | -8.615850e-47 |
| Msa0241610 | Msa1125990 | 0.829492 | 4.995763e-55 | -8.615850e-47 |
| Msa0241610 | Msa1132530 | 0.809166 | 2.164172e-50 | -8.615850e-47 |
| Msa0241610 | Msa1132840 | 0.836780 | 7.658675e-57 | -8.615850e-47 |
| Msa0241610 | Msa1158200 | 0.821443 | 4.025893e-53 | -8.615850e-47 |
| Msa0241610 | Msa1160920 | 0.825560 | 4.386351e-54 | -8.615850e-47 |
| Msa0241610 | Msa1162230 | 0.806389 | 8.423933e-50 | -8.615850e-47 |
| Msa0241610 | Msa1165090 | 0.827857 | 1.240630e-54 | -8.615850e-47 |
| Msa0241610 | Msa1171290 | 0.835716 | 1.426783e-56 | -8.615850e-47 |
| Msa0241610 | Msa1184890 | 0.817555 | 3.103191e-52 | -8.615850e-47 |
| Msa0241610 | Msa1190160 | 0.860915 | 1.480233e-63 | -8.615850e-47 |
| Msa0241610 | Msa1190180 | 0.861019 | 1.376288e-63 | -8.615850e-47 |
| Msa0241610 | Msa1192560 | 0.803707 | 3.065103e-49 | -8.615850e-47 |
| Msa0241610 | Msa1192570 | 0.828487 | 8.750221e-55 | -8.615850e-47 |
| Msa0241610 | Msa1192590 | 0.803976 | 2.695770e-49 | -8.615850e-47 |
| Msa0241610 | Msa1200890 | 0.804451 | 2.146429e-49 | -8.615850e-47 |
| Msa0241610 | Msa1208950 | 0.830363 | 3.062846e-55 | -8.615850e-47 |
| Msa0241610 | Msa1215870 | 0.800134 | 1.661964e-48 | -8.615850e-47 |
| Msa0241610 | Msa1226520 | 0.825536 | 4.443111e-54 | -8.615850e-47 |
| Msa0241610 | Msa1234710 | 0.800040 | 1.736759e-48 | -8.615850e-47 |
| Msa0241610 | Msa1240260 | 0.809530 | 1.808175e-50 | -8.615850e-47 |
| Msa0241610 | Msa1256350 | 0.829559 | 4.810420e-55 | -8.615850e-47 |
| Msa0241610 | Msa1258000 | 0.863816 | 1.899368e-64 | -8.615850e-47 |
| Msa0241610 | Msa1268240 | 0.803332 | 3.667252e-49 | -8.615850e-47 |
| Msa0241610 | Msa1296590 | 0.806219 | 9.148146e-50 | -8.615850e-47 |
| Msa0241610 | Msa1307630 | 0.804150 | 2.480222e-49 | -8.615850e-47 |
| Msa0241610 | Msa1320670 | 0.824541 | 7.634976e-54 | -8.615850e-47 |
| Msa0241610 | Msa1341840 | 0.824496 | 7.821983e-54 | -8.615850e-47 |
| Msa0241610 | Msa1348090 | 0.841805 | 3.803576e-58 | -8.615850e-47 |
| Msa0241610 | Msa1359690 | 0.817216 | 3.698722e-52 | -8.615850e-47 |
| Msa0241610 | Msa1366150 | 0.811809 | 5.815630e-51 | -8.615850e-47 |
| Msa0241610 | Msa1372040 | 0.804378 | 2.222988e-49 | -8.615850e-47 |
| Msa0241610 | Msa1382300 | 0.819499 | 1.124617e-52 | -8.615850e-47 |
| Msa0241610 | Msa1384150 | 0.817299 | 3.544669e-52 | -8.615850e-47 |
| Msa0241610 | Msa1387440 | 0.812152 | 4.894386e-51 | -8.615850e-47 |
| Msa0241610 | Msa1389900 | 0.808206 | 3.471482e-50 | -8.615850e-47 |
| Msa0241610 | Msa1392580 | 0.808101 | 3.654623e-50 | -8.615850e-47 |
| Msa0241610 | Msa1397400 | 0.828369 | 9.340853e-55 | -8.615850e-47 |
| Msa0241610 | Msa1398810 | 0.829371 | 5.344226e-55 | -8.615850e-47 |
| Msa0241610 | Msa1401670 | 0.860698 | 1.723013e-63 | -8.615850e-47 |
| Msa0241610 | Msa1405460 | 0.849963 | 2.307287e-60 | -8.615850e-47 |
| Msa0241610 | Msa1412000 | 0.830525 | 2.796869e-55 | -8.615850e-47 |
| Msa0241610 | Msa1420950 | 0.830779 | 2.423405e-55 | -8.615850e-47 |
| Msa0241610 | Msa1427110 | 0.851186 | 1.045685e-60 | -8.615850e-47 |
| Msa0241610 | Msa1429070 | 0.821740 | 3.437499e-53 | -8.615850e-47 |
| Msa0241610 | Msa1450520 | 0.801088 | 1.061808e-48 | -8.615850e-47 |
| Msa0241610 | Msa1461370 | 0.810570 | 1.079314e-50 | -8.615850e-47 |
| Msa0241610 | Msa1464090 | 0.802205 | 6.266452e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241610 | MtrunA17_Chr2g0293201 | 96.581 | 468 | 16 | 0 | 1 | 468 | 1 | 468 | 0.0 | 801 |
| Msa0241610 | MtrunA17_Chr8g0385291 | 50.254 | 394 | 181 | 6 | 81 | 467 | 116 | 501 | 2.70e-132 | 391 |
| Msa0241610 | MtrunA17_Chr3g0131071 | 51.482 | 371 | 167 | 8 | 88 | 452 | 193 | 556 | 3.49e-127 | 381 |
| Msa0241610 | MtrunA17_Chr1g0183881 | 44.444 | 405 | 198 | 5 | 64 | 468 | 91 | 468 | 2.91e-124 | 370 |
| Msa0241610 | MtrunA17_Chr4g0014901 | 49.347 | 383 | 182 | 7 | 88 | 463 | 213 | 590 | 1.85e-123 | 372 |
| Msa0241610 | MtrunA17_Chr4g0014911 | 43.617 | 470 | 207 | 8 | 6 | 462 | 35 | 459 | 1.25e-120 | 360 |
| Msa0241610 | MtrunA17_Chr4g0004981 | 49.708 | 342 | 162 | 5 | 124 | 461 | 107 | 442 | 1.35e-118 | 355 |
| Msa0241610 | MtrunA17_Chr7g0243541 | 36.682 | 428 | 175 | 9 | 47 | 468 | 62 | 399 | 1.61e-85 | 268 |
| Msa0241610 | MtrunA17_Chr3g0131581 | 29.048 | 210 | 133 | 6 | 142 | 349 | 67 | 262 | 1.30e-19 | 88.6 |
| Msa0241610 | MtrunA17_Chr8g0385681 | 29.524 | 210 | 132 | 8 | 142 | 349 | 50 | 245 | 7.23e-17 | 80.5 |
| Msa0241610 | MtrunA17_Chr8g0385691 | 29.524 | 210 | 132 | 8 | 142 | 349 | 47 | 242 | 5.85e-16 | 77.8 |
| Msa0241610 | MtrunA17_Chr4g0035381 | 27.434 | 226 | 151 | 6 | 132 | 349 | 74 | 294 | 7.79e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0241610 | AT1G30690.1 | 68.713 | 342 | 100 | 3 | 122 | 463 | 200 | 534 | 2.70e-177 | 508 |
| Msa0241610 | AT1G30690.1 | 45.283 | 106 | 51 | 2 | 1 | 100 | 1 | 105 | 3.35e-12 | 68.9 |
| Msa0241610 | AT1G30690.2 | 68.713 | 342 | 100 | 3 | 122 | 463 | 200 | 534 | 2.70e-177 | 508 |
| Msa0241610 | AT1G30690.2 | 45.283 | 106 | 51 | 2 | 1 | 100 | 1 | 105 | 3.35e-12 | 68.9 |
| Msa0241610 | AT1G72160.1 | 44.924 | 463 | 212 | 7 | 2 | 461 | 63 | 485 | 2.17e-127 | 379 |
| Msa0241610 | AT4G09160.2 | 43.187 | 433 | 195 | 7 | 34 | 462 | 251 | 636 | 1.57e-119 | 363 |
| Msa0241610 | AT4G09160.1 | 43.187 | 433 | 195 | 7 | 34 | 462 | 276 | 661 | 1.61e-119 | 364 |
| Msa0241610 | AT4G09160.3 | 43.187 | 433 | 195 | 7 | 34 | 462 | 251 | 636 | 1.62e-119 | 363 |
| Msa0241610 | AT3G51670.1 | 48.370 | 368 | 174 | 7 | 109 | 466 | 44 | 405 | 5.89e-117 | 349 |
| Msa0241610 | AT1G22530.2 | 43.832 | 381 | 193 | 9 | 87 | 464 | 286 | 648 | 1.11e-96 | 305 |
| Msa0241610 | AT1G22530.1 | 43.832 | 381 | 193 | 9 | 87 | 464 | 320 | 682 | 1.29e-96 | 305 |
| Msa0241610 | AT1G72150.1 | 43.149 | 343 | 179 | 9 | 126 | 464 | 243 | 573 | 3.94e-86 | 275 |
| Msa0241610 | AT1G01630.1 | 27.143 | 210 | 137 | 6 | 142 | 349 | 50 | 245 | 8.58e-15 | 74.7 |
| Msa0241610 | AT4G08690.2 | 27.626 | 257 | 154 | 10 | 108 | 358 | 14 | 244 | 2.77e-13 | 70.9 |
| Msa0241610 | AT4G08690.1 | 27.626 | 257 | 154 | 10 | 108 | 358 | 14 | 244 | 2.77e-13 | 70.9 |
| Msa0241610 | AT4G08690.3 | 27.626 | 257 | 154 | 10 | 108 | 358 | 14 | 244 | 2.77e-13 | 70.9 |
| Msa0241610 | AT2G21540.6 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 5.87e-11 | 65.1 |
| Msa0241610 | AT2G21540.2 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 5.87e-11 | 65.1 |
| Msa0241610 | AT2G21540.1 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 5.87e-11 | 65.1 |
| Msa0241610 | AT2G21540.4 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 5.87e-11 | 65.1 |
| Msa0241610 | AT2G21540.3 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 6.25e-11 | 65.1 |
| Msa0241610 | AT2G21540.5 | 26.724 | 232 | 145 | 8 | 132 | 349 | 85 | 305 | 6.25e-11 | 65.1 |
Find 106 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATAATTCAATTCTTTA+AGG | 0.059255 | 2_2:+17318946 | None:intergenic |
| TTTGAGGGCAAGAGAGTTTA+AGG | 0.103122 | 2_2:-17320887 | Msa0241610:CDS |
| GTGCTGGGACTTGGCTGTTT+TGG | 0.168500 | 2_2:-17319181 | Msa0241610:CDS |
| TCTCAAAGAGTTTGAGAAAA+AGG | 0.202003 | 2_2:-17321157 | Msa0241610:CDS |
| GAGATTTATCAAAAGACTTT+TGG | 0.206251 | 2_2:-17320688 | Msa0241610:CDS |
| TACACAATCATTGTTCAAAA+AGG | 0.217177 | 2_2:-17319108 | Msa0241610:CDS |
| AGGAAAAGGATTTGTCTTTA+TGG | 0.230619 | 2_2:-17320969 | Msa0241610:CDS |
| TTTGTTCCATTGTGTGTATT+TGG | 0.253649 | 2_2:-17318915 | Msa0241610:three_prime_UTR |
| TGAGAAATGTTCTTCTTATA+AGG | 0.258619 | 2_2:-17321202 | Msa0241610:CDS |
| CAACAACAACCTCAACCTTC+TGG | 0.270747 | 2_2:+17321298 | None:intergenic |
| AATGAAGATTGATTCGGTTT+TGG | 0.277922 | 2_2:-17320815 | Msa0241610:CDS |
| ATTCTAAGCTCTTTCTTAGA+AGG | 0.296077 | 2_2:+17320532 | None:intergenic |
| AAGAATGATTCTGAGTTCTT+TGG | 0.307280 | 2_2:-17319880 | Msa0241610:CDS |
| GGAAAAGGATTTGTCTTTAT+GGG | 0.314477 | 2_2:-17320968 | Msa0241610:CDS |
| TTGAAACCACCATAGTTAAC+AGG | 0.330603 | 2_2:+17319907 | None:intergenic |
| TGTTGAAGAAGACACTTAAA+TGG | 0.342376 | 2_2:-17320846 | Msa0241610:CDS |
| GTTCACAAGAAGGACCTATT+AGG | 0.377937 | 2_2:-17319074 | Msa0241610:CDS |
| GGTTGAAGAGGTTGAGGAAA+AGG | 0.389487 | 2_2:-17320983 | Msa0241610:CDS |
| AAGGACCAGGTGAATTCTTA+AGG | 0.391707 | 2_2:+17320551 | None:intergenic |
| AACAACAACCTCAACCTTCT+GGG | 0.397542 | 2_2:+17321299 | None:intergenic |
| GAGATGGAGGTGTTCTGTTA+TGG | 0.398108 | 2_2:-17320638 | Msa0241610:CDS |
| TTCTTGAAAGTGTTCCTAAT+AGG | 0.405231 | 2_2:+17319060 | None:intergenic |
| AAACACTTTGTGCTGGGACT+TGG | 0.406964 | 2_2:-17319190 | Msa0241610:CDS |
| TGAAGGAAGAAGAAGAGAAA+AGG | 0.407319 | 2_2:-17321005 | Msa0241610:CDS |
| GAAGGAAGAAGAAGAGAAAA+GGG | 0.413453 | 2_2:-17321004 | Msa0241610:CDS |
| TTTGTTCTTTGAGTTAAGAA+TGG | 0.417407 | 2_2:+17320088 | None:intergenic |
| ACTCCTTCATTTCCTTTGCT+TGG | 0.417448 | 2_2:+17320931 | None:intergenic |
| GTTGAAGCTTTGAAAGAAGA+AGG | 0.427026 | 2_2:-17321051 | Msa0241610:CDS |
| GGTTTATATGAAGTTTGAAA+AGG | 0.433761 | 2_2:+17321564 | None:intergenic |
| GTTGAGGTTGTTGTTGAAGA+AGG | 0.435417 | 2_2:-17321291 | Msa0241610:CDS |
| GCAAACTGTTACAATGTTGC+AGG | 0.436211 | 2_2:-17320500 | Msa0241610:CDS |
| GAAGGAAATGAAGATTGATT+CGG | 0.437171 | 2_2:-17320821 | Msa0241610:CDS |
| AAGAACAAAGAGCAAATTTG+TGG | 0.438490 | 2_2:-17320074 | Msa0241610:CDS |
| AAAGGAAGAAGAGACCAAAA+AGG | 0.439180 | 2_2:-17321073 | Msa0241610:CDS |
| GAAAAGGGTTGAAGAGGTTG+AGG | 0.440546 | 2_2:-17320989 | Msa0241610:CDS |
| TCAGAACTCATTCTCAAGGC+TGG | 0.441816 | 2_2:-17319841 | Msa0241610:CDS |
| TTAACAGGGATCTCCTCAAT+TGG | 0.446328 | 2_2:+17319922 | None:intergenic |
| AACATCTATAGTGTGTTTGA+TGG | 0.447007 | 2_2:-17320715 | Msa0241610:CDS |
| GCAGGACAATTACCCTGAAT+TGG | 0.448528 | 2_2:-17320482 | Msa0241610:CDS |
| CGTTGAAGCTAAGGAATCAA+TGG | 0.450052 | 2_2:-17321250 | Msa0241610:CDS |
| GAGGAGATCCCTGTTAACTA+TGG | 0.464053 | 2_2:-17319916 | Msa0241610:CDS |
| GGTGTTCTGTTATGGAGAAA+TGG | 0.464992 | 2_2:-17320630 | Msa0241610:CDS |
| ACTTTCAAGAACAATGAACT+TGG | 0.467179 | 2_2:-17319048 | Msa0241610:CDS |
| GAAGTTTGAAAAGGGAAGAA+AGG | 0.470868 | 2_2:+17321573 | None:intergenic |
| AAAGAAGAAGGTGGTGAAGA+GGG | 0.471661 | 2_2:-17321039 | Msa0241610:CDS |
| GTGTATGAGCCCTCATCATT+GGG | 0.473892 | 2_2:+17319126 | None:intergenic |
| AGTGTTTCAGTGACCTTAGC+GGG | 0.483761 | 2_2:+17320043 | None:intergenic |
| TGTGTATGAGCCCTCATCAT+TGG | 0.484245 | 2_2:+17319125 | None:intergenic |
| TTCTCTCACACTTTCCTCAA+AGG | 0.486409 | 2_2:-17321473 | Msa0241610:intron |
| TGAAGAAAACGTTGAAGCTA+AGG | 0.490839 | 2_2:-17321259 | Msa0241610:CDS |
| AGGTTGGAAACACTTTGTGC+TGG | 0.495437 | 2_2:-17319197 | Msa0241610:CDS |
| TATAGAGATTCCTGCATTGG+AGG | 0.495571 | 2_2:-17319806 | Msa0241610:intron |
| TTGCCAAGCAAAGGAAATGA+AGG | 0.497177 | 2_2:-17320934 | Msa0241610:CDS |
| TGAAAAGGGAAGAAAGGAAA+AGG | 0.498364 | 2_2:+17321579 | None:intergenic |
| AGAAGAGAAAAGGGTTGAAG+AGG | 0.500355 | 2_2:-17320995 | Msa0241610:CDS |
| AGACATAGTTTCAGCAGTCA+TGG | 0.508382 | 2_2:+17321332 | None:intergenic |
| GTTTATATGAAGTTTGAAAA+GGG | 0.509563 | 2_2:+17321565 | None:intergenic |
| AGCTCTTGTTGTTCTTGTAA+CGG | 0.509938 | 2_2:+17318971 | None:intergenic |
| TTTGATTGAATTTAGATCAA+AGG | 0.509973 | 2_2:-17321133 | Msa0241610:CDS |
| TGTTTCAGAACTCATTCTCA+AGG | 0.510830 | 2_2:-17319845 | Msa0241610:CDS |
| AGAAGAAGCCCAGAAGGTTG+AGG | 0.511990 | 2_2:-17321307 | Msa0241610:CDS |
| CAAGAACAATGAACTTGGGA+AGG | 0.514037 | 2_2:-17319043 | Msa0241610:CDS |
| TGAATTTAGATCAAAGGTTG+AGG | 0.516018 | 2_2:-17321127 | Msa0241610:CDS |
| GCTTCTGCTGCTTATATGAA+CGG | 0.524197 | 2_2:-17320769 | Msa0241610:CDS |
| GAGAACAAGACATACCTTTG+AGG | 0.524295 | 2_2:+17321459 | None:intergenic |
| AACTATAGAGATTCCTGCAT+TGG | 0.526873 | 2_2:-17319809 | Msa0241610:CDS |
| GTTCTGAAACAGAAGCATCT+TGG | 0.530758 | 2_2:+17319857 | None:intergenic |
| GGGTTGGGAGGTAAGTTACA+AGG | 0.531439 | 2_2:-17319160 | Msa0241610:CDS |
| TGTGGTTGCTCGTCCCGCTA+AGG | 0.534020 | 2_2:-17320056 | Msa0241610:CDS |
| GTAGTTGTTGTGTTTGTGAA+AGG | 0.539709 | 2_2:+17321525 | None:intergenic |
| AAATAGGTACATTCCAATTG+AGG | 0.545143 | 2_2:-17319935 | Msa0241610:intron |
| GAAAAGGATTTGTCTTTATG+GGG | 0.548785 | 2_2:-17320967 | Msa0241610:CDS |
| GGTTGGAAACACTTTGTGCT+GGG | 0.556295 | 2_2:-17319196 | Msa0241610:CDS |
| AGCTCTTTCTTAGAAGGACC+AGG | 0.558232 | 2_2:+17320538 | None:intergenic |
| GAAAGTGTGAGAGAAAATTG+AGG | 0.560804 | 2_2:+17321481 | None:intergenic |
| GAAAGAAGAAGGTGGTGAAG+AGG | 0.561752 | 2_2:-17321040 | Msa0241610:CDS |
| AAGAAGATAGGTTCACAAGA+AGG | 0.566410 | 2_2:-17319084 | Msa0241610:CDS |
| AAAGGTCGTGTGAGTTGTGA+GGG | 0.566683 | 2_2:+17321543 | None:intergenic |
| AGAGGGTGATAAAGTTGTGA+AGG | 0.574412 | 2_2:-17321022 | Msa0241610:CDS |
| GAAAGGTCGTGTGAGTTGTG+AGG | 0.578358 | 2_2:+17321542 | None:intergenic |
| GGACAATTACCCTGAATTGG+TGG | 0.580178 | 2_2:-17320479 | Msa0241610:CDS |
| CAGAAGCTGAATTTGAAACC+AGG | 0.580201 | 2_2:-17320604 | Msa0241610:CDS |
| ATGAAACCAAATACACACAA+TGG | 0.580373 | 2_2:+17318909 | None:intergenic |
| CTTTCAAGAACAATGAACTT+GGG | 0.580721 | 2_2:-17319047 | Msa0241610:CDS |
| GTCTCAAGAAGAAGCCCAGA+AGG | 0.581073 | 2_2:-17321313 | Msa0241610:CDS |
| GGAGTTTGTTCCCAATGATG+AGG | 0.582127 | 2_2:-17319136 | Msa0241610:CDS |
| TTAACTATGGTGGTTTCAAG+AGG | 0.582409 | 2_2:-17319903 | Msa0241610:CDS |
| GAGTTTGTTCCCAATGATGA+GGG | 0.586133 | 2_2:-17319135 | Msa0241610:CDS |
| AAAGGGAAGAAAGGAAAAGG+TGG | 0.590992 | 2_2:+17321582 | None:intergenic |
| GAGATCCCTGTTAACTATGG+TGG | 0.591967 | 2_2:-17319913 | Msa0241610:CDS |
| CAGTGTTTCAGTGACCTTAG+CGG | 0.595987 | 2_2:+17320042 | None:intergenic |
| AGATGAGATAGATACATCAC+TGG | 0.598675 | 2_2:+17318781 | None:intergenic |
| GAAGACACTTAAATGGAGGA+AGG | 0.599488 | 2_2:-17320839 | Msa0241610:CDS |
| AGGAAATGAAGGAGTTGATG+TGG | 0.611522 | 2_2:-17320923 | Msa0241610:CDS |
| TTGAGAGCATAGTACCAGAA+AGG | 0.611651 | 2_2:+17320124 | None:intergenic |
| AATGACCTTAAGAATTCACC+TGG | 0.635865 | 2_2:-17320556 | Msa0241610:CDS |
| CTATAGATGTTGTAACACAC+AGG | 0.639890 | 2_2:+17320727 | None:intergenic |
| AGCAAAGAAGAAACACCACC+TGG | 0.660485 | 2_2:+17320586 | None:intergenic |
| AAGGGAAGAAAGGAAAAGGT+GGG | 0.660659 | 2_2:+17321583 | None:intergenic |
| TGAAACCACCATAGTTAACA+GGG | 0.661394 | 2_2:+17319908 | None:intergenic |
| GAAGCTTTGAAAGAAGAAGG+TGG | 0.663635 | 2_2:-17321048 | Msa0241610:CDS |
| TTGGGAGGTAAGTTACAAGG+AGG | 0.664002 | 2_2:-17319157 | Msa0241610:CDS |
| TGAAGAAGACACTTAAATGG+AGG | 0.668116 | 2_2:-17320843 | Msa0241610:CDS |
| ATGAACGGTGTTGATCGTGA+AGG | 0.679355 | 2_2:-17320754 | Msa0241610:CDS |
| TATAGATGTTGTAACACACA+GGG | 0.704028 | 2_2:+17320728 | None:intergenic |
| AAGCTGAATTTGAAACCAGG+TGG | 0.704521 | 2_2:-17320601 | Msa0241610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAACAATATAATGT+CGG | + | chr2_2:17319987-17320006 | None:intergenic | 15.0% |
| !! | GTTTATATGAAGTTTGAAAA+GGG | + | chr2_2:17318727-17318746 | None:intergenic | 20.0% |
| !! | TTTGATTGAATTTAGATCAA+AGG | - | chr2_2:17319156-17319175 | Msa0241610:CDS | 20.0% |
| !!! | AGATTTATCAAAAGACTTTT+GGG | - | chr2_2:17319602-17319621 | Msa0241610:intron | 20.0% |
| !!! | TCTAAAATCAAATGCAAAAT+TGG | - | chr2_2:17321038-17321057 | Msa0241610:CDS | 20.0% |
| !!! | AAGGTTTTTTGTCTTTTAAT+AGG | - | chr2_2:17321072-17321091 | Msa0241610:CDS | 20.0% |
| !!! | TTTTTTGTCTTTTAATAGGT+TGG | - | chr2_2:17321076-17321095 | Msa0241610:CDS | 20.0% |
| !! | CTTCATAATTCAATTCTTTA+AGG | + | chr2_2:17321346-17321365 | None:intergenic | 20.0% |
| !!! | TTCATTTAGATTTTGAAAGT+AGG | - | chr2_2:17321398-17321417 | Msa0241610:intron | 20.0% |
| !!! | TTTTTTAGTTTAAGTCTTCA+AGG | + | chr2_2:17321566-17321585 | None:intergenic | 20.0% |
| !! | GAAGACTTAAACTAAAAAAT+TGG | - | chr2_2:17321567-17321586 | Msa0241610:five_prime_UTR | 20.0% |
| ! | GGTTTATATGAAGTTTGAAA+AGG | + | chr2_2:17318728-17318747 | None:intergenic | 25.0% |
| !! | TTCTCATTGCTTTAAATTTC+TGG | - | chr2_2:17318855-17318874 | Msa0241610:three_prime_UTR | 25.0% |
| !! | TCTCATTGCTTTAAATTTCT+GGG | - | chr2_2:17318856-17318875 | Msa0241610:three_prime_UTR | 25.0% |
| ! | TGAGAAATGTTCTTCTTATA+AGG | - | chr2_2:17319087-17319106 | Msa0241610:CDS | 25.0% |
| !! | TTCTTCCTTTTTCTCAAAAA+GGG | + | chr2_2:17319206-17319225 | None:intergenic | 25.0% |
| !! | GAGATTTATCAAAAGACTTT+TGG | - | chr2_2:17319601-17319620 | Msa0241610:intron | 25.0% |
| ! | AAAAAACCTGAAGGAATTTA+AGG | + | chr2_2:17319865-17319884 | None:intergenic | 25.0% |
| !! | TATTTATGTTGTATTGGTGT+TGG | - | chr2_2:17320018-17320037 | Msa0241610:intron | 25.0% |
| !! | TTTGTTCTTTGAGTTAAGAA+TGG | + | chr2_2:17320204-17320223 | None:intergenic | 25.0% |
| !!! | GAAATGATCAATTGATTTTG+AGG | + | chr2_2:17320284-17320303 | None:intergenic | 25.0% |
| !! | TTTGAGATGGAAAGTAAATA+AGG | + | chr2_2:17320337-17320356 | None:intergenic | 25.0% |
| ! | ATTTACTTTCCATCTCAAAT+AGG | - | chr2_2:17320338-17320357 | Msa0241610:intron | 25.0% |
| ! | AAAATTGGACACATTCTAAA+AGG | - | chr2_2:17321053-17321072 | Msa0241610:CDS | 25.0% |
| ! | TACACAATCATTGTTCAAAA+AGG | - | chr2_2:17321181-17321200 | Msa0241610:CDS | 25.0% |
| ! | ACACAATCATTGTTCAAAAA+GGG | - | chr2_2:17321182-17321201 | Msa0241610:CDS | 25.0% |
| !!! | ATTTAGATTTTGAAAGTAGG+TGG | - | chr2_2:17321401-17321420 | Msa0241610:intron | 25.0% |
| !! | AAATGAAAGAATGCCTTTTT+CGG | + | chr2_2:17321456-17321475 | None:intergenic | 25.0% |
| !!! | CATTTCTCAACTGTTTTTGT+GGG | + | chr2_2:17319076-17319095 | None:intergenic | 30.0% |
| !!! | ACATTTCTCAACTGTTTTTG+TGG | + | chr2_2:17319077-17319096 | None:intergenic | 30.0% |
| TCTCAAAGAGTTTGAGAAAA+AGG | - | chr2_2:17319132-17319151 | Msa0241610:CDS | 30.0% | |
| TGAATTTAGATCAAAGGTTG+AGG | - | chr2_2:17319162-17319181 | Msa0241610:CDS | 30.0% | |
| ! | CTTCTTCCTTTTTCTCAAAA+AGG | + | chr2_2:17319207-17319226 | None:intergenic | 30.0% |
| ! | TTTCAAAGCTTCAACCTTTT+TGG | + | chr2_2:17319233-17319252 | None:intergenic | 30.0% |
| AGGAAAAGGATTTGTCTTTA+TGG | - | chr2_2:17319320-17319339 | Msa0241610:intron | 30.0% | |
| GGAAAAGGATTTGTCTTTAT+GGG | - | chr2_2:17319321-17319340 | Msa0241610:intron | 30.0% | |
| GAAAAGGATTTGTCTTTATG+GGG | - | chr2_2:17319322-17319341 | Msa0241610:intron | 30.0% | |
| !!! | TGGTTTTGTTGAAGTTTTTG+AGG | - | chr2_2:17319386-17319405 | Msa0241610:intron | 30.0% |
| !!! | GGTTTTGTTGAAGTTTTTGA+GGG | - | chr2_2:17319387-17319406 | Msa0241610:intron | 30.0% |
| TGTTGAAGAAGACACTTAAA+TGG | - | chr2_2:17319443-17319462 | Msa0241610:intron | 30.0% | |
| GAAGGAAATGAAGATTGATT+CGG | - | chr2_2:17319468-17319487 | Msa0241610:intron | 30.0% | |
| !!! | AATGAAGATTGATTCGGTTT+TGG | - | chr2_2:17319474-17319493 | Msa0241610:intron | 30.0% |
| TATAGATGTTGTAACACACA+GGG | + | chr2_2:17319564-17319583 | None:intergenic | 30.0% | |
| AACATCTATAGTGTGTTTGA+TGG | - | chr2_2:17319574-17319593 | Msa0241610:intron | 30.0% | |
| !! | AGAGAAAAGAGTTTTTGAGA+TGG | - | chr2_2:17319635-17319654 | Msa0241610:intron | 30.0% |
| ATTCTAAGCTCTTTCTTAGA+AGG | + | chr2_2:17319760-17319779 | None:intergenic | 30.0% | |
| TGAGAAAGAAAAAAACCTGA+AGG | + | chr2_2:17319874-17319893 | None:intergenic | 30.0% | |
| TTCGCGTATTTATGTTGTAT+TGG | - | chr2_2:17320012-17320031 | Msa0241610:intron | 30.0% | |
| TACTATAAACCTATCTAGCA+AGG | + | chr2_2:17320091-17320110 | None:intergenic | 30.0% | |
| ! | TTTTCATCAATGTTCCTTTC+TGG | - | chr2_2:17320151-17320170 | Msa0241610:intron | 30.0% |
| AAGAACAAAGAGCAAATTTG+TGG | - | chr2_2:17320215-17320234 | Msa0241610:intron | 30.0% | |
| AAATAGGTACATTCCAATTG+AGG | - | chr2_2:17320354-17320373 | Msa0241610:intron | 30.0% | |
| AAGAATGATTCTGAGTTCTT+TGG | - | chr2_2:17320409-17320428 | Msa0241610:intron | 30.0% | |
| TGTGTATACATAAAAGCTTG+TGG | + | chr2_2:17320515-17320534 | None:intergenic | 30.0% | |
| ATAGTAGCTGTGAGATTATT+TGG | - | chr2_2:17320801-17320820 | Msa0241610:CDS | 30.0% | |
| TAGTAGCTGTGAGATTATTT+GGG | - | chr2_2:17320802-17320821 | Msa0241610:CDS | 30.0% | |
| CTTATGCATAAGAACTGATA+TGG | - | chr2_2:17320914-17320933 | Msa0241610:CDS | 30.0% | |
| TATGGTGTGAATTCTTAACT+TGG | - | chr2_2:17320932-17320951 | Msa0241610:CDS | 30.0% | |
| !! | GCATTTGATTTTAGAAGAAC+TGG | + | chr2_2:17321033-17321052 | None:intergenic | 30.0% |
| !! | TTCTTGAAAGTGTTCCTAAT+AGG | + | chr2_2:17321232-17321251 | None:intergenic | 30.0% |
| ACTTTCAAGAACAATGAACT+TGG | - | chr2_2:17321241-17321260 | Msa0241610:CDS | 30.0% | |
| CTTTCAAGAACAATGAACTT+GGG | - | chr2_2:17321242-17321261 | Msa0241610:CDS | 30.0% | |
| ACACATCAAACAAAAAGAAG+AGG | - | chr2_2:17321287-17321306 | Msa0241610:CDS | 30.0% | |
| CACATCAAACAAAAAGAAGA+GGG | - | chr2_2:17321288-17321307 | Msa0241610:CDS | 30.0% | |
| TTTGTTCCATTGTGTGTATT+TGG | - | chr2_2:17321374-17321393 | Msa0241610:intron | 30.0% | |
| ATGAAACCAAATACACACAA+TGG | + | chr2_2:17321383-17321402 | None:intergenic | 30.0% | |
| TGAAAAGGGAAGAAAGGAAA+AGG | + | chr2_2:17318713-17318732 | None:intergenic | 35.0% | |
| GAAGTTTGAAAAGGGAAGAA+AGG | + | chr2_2:17318719-17318738 | None:intergenic | 35.0% | |
| GTAGTTGTTGTGTTTGTGAA+AGG | + | chr2_2:17318767-17318786 | None:intergenic | 35.0% | |
| ! | GAAAGTGTGAGAGAAAATTG+AGG | + | chr2_2:17318811-17318830 | None:intergenic | 35.0% |
| TGAAGAAAACGTTGAAGCTA+AGG | - | chr2_2:17319030-17319049 | Msa0241610:CDS | 35.0% | |
| !! | GAACACCCTTTTTGAGAAAA+AGG | - | chr2_2:17319198-17319217 | Msa0241610:CDS | 35.0% |
| AAAGGAAGAAGAGACCAAAA+AGG | - | chr2_2:17319216-17319235 | Msa0241610:intron | 35.0% | |
| !! | GTTGAAGCTTTGAAAGAAGA+AGG | - | chr2_2:17319238-17319257 | Msa0241610:intron | 35.0% |
| TGAAGGAAGAAGAAGAGAAA+AGG | - | chr2_2:17319284-17319303 | Msa0241610:intron | 35.0% | |
| GAAGGAAGAAGAAGAGAAAA+GGG | - | chr2_2:17319285-17319304 | Msa0241610:intron | 35.0% | |
| TGAAGAAGACACTTAAATGG+AGG | - | chr2_2:17319446-17319465 | Msa0241610:intron | 35.0% | |
| !!! | GGAAGATTTTGGTTCTGATT+TGG | - | chr2_2:17319498-17319517 | Msa0241610:intron | 35.0% |
| CTATAGATGTTGTAACACAC+AGG | + | chr2_2:17319565-17319584 | None:intergenic | 35.0% | |
| !!! | GAAAAGAGTTTTTGAGATGG+AGG | - | chr2_2:17319638-17319657 | Msa0241610:intron | 35.0% |
| AATGACCTTAAGAATTCACC+TGG | - | chr2_2:17319733-17319752 | Msa0241610:intron | 35.0% | |
| !!! | CATTTTTTGCCACCAATTCA+GGG | + | chr2_2:17319822-17319841 | None:intergenic | 35.0% |
| !!! | ACATTTTTTGCCACCAATTC+AGG | + | chr2_2:17319823-17319842 | None:intergenic | 35.0% |
| TTCATGAAATGTCTAGTGTC+CGG | + | chr2_2:17320059-17320078 | None:intergenic | 35.0% | |
| TGGAATGTACCTATTTGAGA+TGG | + | chr2_2:17320350-17320369 | None:intergenic | 35.0% | |
| TGAAACCACCATAGTTAACA+GGG | + | chr2_2:17320384-17320403 | None:intergenic | 35.0% | |
| TTGAAACCACCATAGTTAAC+AGG | + | chr2_2:17320385-17320404 | None:intergenic | 35.0% | |
| TTAACTATGGTGGTTTCAAG+AGG | - | chr2_2:17320386-17320405 | Msa0241610:intron | 35.0% | |
| TGTTTCAGAACTCATTCTCA+AGG | - | chr2_2:17320444-17320463 | Msa0241610:intron | 35.0% | |
| AACTATAGAGATTCCTGCAT+TGG | - | chr2_2:17320480-17320499 | Msa0241610:CDS | 35.0% | |
| TCTACTCTATAGTGTGCTTT+AGG | - | chr2_2:17320536-17320555 | Msa0241610:CDS | 35.0% | |
| AGGAATATGTAGTGCATGTT+AGG | - | chr2_2:17320556-17320575 | Msa0241610:CDS | 35.0% | |
| GTTCAAAAAGGGAAGAAGAT+AGG | - | chr2_2:17321193-17321212 | Msa0241610:CDS | 35.0% | |
| AAGAAGATAGGTTCACAAGA+AGG | - | chr2_2:17321205-17321224 | Msa0241610:CDS | 35.0% | |
| !! | AGCTCTTGTTGTTCTTGTAA+CGG | + | chr2_2:17321321-17321340 | None:intergenic | 35.0% |
| !!! | AGAGTTTTGAAGACCGAAAA+AGG | - | chr2_2:17321440-17321459 | Msa0241610:intron | 35.0% |
| AGATGAGATAGATACATCAC+TGG | + | chr2_2:17321511-17321530 | None:intergenic | 35.0% | |
| TTCTCTCACACTTTCCTCAA+AGG | - | chr2_2:17318816-17318835 | Msa0241610:three_prime_UTR | 40.0% | |
| GAGAACAAGACATACCTTTG+AGG | + | chr2_2:17318833-17318852 | None:intergenic | 40.0% | |
| AGACATAGTTTCAGCAGTCA+TGG | + | chr2_2:17318960-17318979 | None:intergenic | 40.0% | |
| AACAACAACCTCAACCTTCT+GGG | + | chr2_2:17318993-17319012 | None:intergenic | 40.0% | |
| ! | GTTGAGGTTGTTGTTGAAGA+AGG | - | chr2_2:17318998-17319017 | Msa0241610:CDS | 40.0% |
| CGTTGAAGCTAAGGAATCAA+TGG | - | chr2_2:17319039-17319058 | Msa0241610:CDS | 40.0% | |
| !! | AAGGTTGAGGAAGCTGTTTT+AGG | - | chr2_2:17319175-17319194 | Msa0241610:CDS | 40.0% |
| !! | AGGTTGAGGAAGCTGTTTTA+GGG | - | chr2_2:17319176-17319195 | Msa0241610:CDS | 40.0% |
| !! | GAAGCTTTGAAAGAAGAAGG+TGG | - | chr2_2:17319241-17319260 | Msa0241610:intron | 40.0% |
| AAAGAAGAAGGTGGTGAAGA+GGG | - | chr2_2:17319250-17319269 | Msa0241610:intron | 40.0% | |
| AGAGGGTGATAAAGTTGTGA+AGG | - | chr2_2:17319267-17319286 | Msa0241610:intron | 40.0% | |
| AGAAGAGAAAAGGGTTGAAG+AGG | - | chr2_2:17319294-17319313 | Msa0241610:intron | 40.0% | |
| TTGCCAAGCAAAGGAAATGA+AGG | - | chr2_2:17319355-17319374 | Msa0241610:intron | 40.0% | |
| ACTCCTTCATTTCCTTTGCT+TGG | + | chr2_2:17319361-17319380 | None:intergenic | 40.0% | |
| !! | AGGAAATGAAGGAGTTGATG+TGG | - | chr2_2:17319366-17319385 | Msa0241610:intron | 40.0% |
| TTTGAGGGCAAGAGAGTTTA+AGG | - | chr2_2:17319402-17319421 | Msa0241610:intron | 40.0% | |
| GAAGACACTTAAATGGAGGA+AGG | - | chr2_2:17319450-17319469 | Msa0241610:intron | 40.0% | |
| !!! | GAAGATTGATTCGGTTTTGG+AGG | - | chr2_2:17319477-17319496 | Msa0241610:intron | 40.0% |
| !!! | TCGGTTTTGGAGGAAGATTT+TGG | - | chr2_2:17319487-17319506 | Msa0241610:intron | 40.0% |
| ! | GCTTCTGCTGCTTATATGAA+CGG | - | chr2_2:17319520-17319539 | Msa0241610:intron | 40.0% |
| !! | TCAAAAGACTTTTGGGAGTG+AGG | - | chr2_2:17319609-17319628 | Msa0241610:intron | 40.0% |
| GGTGTTCTGTTATGGAGAAA+TGG | - | chr2_2:17319659-17319678 | Msa0241610:intron | 40.0% | |
| ! | CAGAAGCTGAATTTGAAACC+AGG | - | chr2_2:17319685-17319704 | Msa0241610:intron | 40.0% |
| ! | AAGCTGAATTTGAAACCAGG+TGG | - | chr2_2:17319688-17319707 | Msa0241610:intron | 40.0% |
| AAGGACCAGGTGAATTCTTA+AGG | + | chr2_2:17319741-17319760 | None:intergenic | 40.0% | |
| GCAAACTGTTACAATGTTGC+AGG | - | chr2_2:17319789-17319808 | Msa0241610:intron | 40.0% | |
| CACACTCCTTAAATTCCTTC+AGG | - | chr2_2:17319856-17319875 | Msa0241610:CDS | 40.0% | |
| TCATGAAATGTCTAGTGTCC+GGG | + | chr2_2:17320058-17320077 | None:intergenic | 40.0% | |
| TCTGTAATGCCTTGCTAGAT+AGG | - | chr2_2:17320079-17320098 | Msa0241610:CDS | 40.0% | |
| ! | TTGAGAGCATAGTACCAGAA+AGG | + | chr2_2:17320168-17320187 | None:intergenic | 40.0% |
| TTAACAGGGATCTCCTCAAT+TGG | + | chr2_2:17320370-17320389 | None:intergenic | 40.0% | |
| !! | GTTCTGAAACAGAAGCATCT+TGG | + | chr2_2:17320435-17320454 | None:intergenic | 40.0% |
| TATAGAGATTCCTGCATTGG+AGG | - | chr2_2:17320483-17320502 | Msa0241610:CDS | 40.0% | |
| ! | TTTTGGACAAGTGCATGTGA+GGG | - | chr2_2:17320741-17320760 | Msa0241610:CDS | 40.0% |
| CTTGTAGAGCTCATGCATAA+AGG | + | chr2_2:17320845-17320864 | None:intergenic | 40.0% | |
| ! | GAGTTTGTTCCCAATGATGA+GGG | - | chr2_2:17321154-17321173 | Msa0241610:CDS | 40.0% |
| GTTCACAAGAAGGACCTATT+AGG | - | chr2_2:17321215-17321234 | Msa0241610:CDS | 40.0% | |
| CAAGAACAATGAACTTGGGA+AGG | - | chr2_2:17321246-17321265 | Msa0241610:CDS | 40.0% | |
| AAAGGTCGTGTGAGTTGTGA+GGG | + | chr2_2:17318749-17318768 | None:intergenic | 45.0% | |
| CAACAACAACCTCAACCTTC+TGG | + | chr2_2:17318994-17319013 | None:intergenic | 45.0% | |
| GAAAGAAGAAGGTGGTGAAG+AGG | - | chr2_2:17319249-17319268 | Msa0241610:intron | 45.0% | |
| GAAAAGGGTTGAAGAGGTTG+AGG | - | chr2_2:17319300-17319319 | Msa0241610:intron | 45.0% | |
| GGTTGAAGAGGTTGAGGAAA+AGG | - | chr2_2:17319306-17319325 | Msa0241610:intron | 45.0% | |
| !!! | GTGTCACTTTTGCCAAGCAA+AGG | - | chr2_2:17319346-17319365 | Msa0241610:intron | 45.0% |
| !! | ATGAACGGTGTTGATCGTGA+AGG | - | chr2_2:17319535-17319554 | Msa0241610:intron | 45.0% |
| !! | GAGATGGAGGTGTTCTGTTA+TGG | - | chr2_2:17319651-17319670 | Msa0241610:intron | 45.0% |
| AGCAAAGAAGAAACACCACC+TGG | + | chr2_2:17319706-17319725 | None:intergenic | 45.0% | |
| AGCTCTTTCTTAGAAGGACC+AGG | + | chr2_2:17319754-17319773 | None:intergenic | 45.0% | |
| GCAGGACAATTACCCTGAAT+TGG | - | chr2_2:17319807-17319826 | Msa0241610:CDS | 45.0% | |
| GGACAATTACCCTGAATTGG+TGG | - | chr2_2:17319810-17319829 | Msa0241610:CDS | 45.0% | |
| CCACATATCAGTGTCATGTC+CGG | + | chr2_2:17319937-17319956 | None:intergenic | 45.0% | |
| AGTGTTTCAGTGACCTTAGC+GGG | + | chr2_2:17320249-17320268 | None:intergenic | 45.0% | |
| CAGTGTTTCAGTGACCTTAG+CGG | + | chr2_2:17320250-17320269 | None:intergenic | 45.0% | |
| GAGGAGATCCCTGTTAACTA+TGG | - | chr2_2:17320373-17320392 | Msa0241610:intron | 45.0% | |
| GAGATCCCTGTTAACTATGG+TGG | - | chr2_2:17320376-17320395 | Msa0241610:intron | 45.0% | |
| TCAGAACTCATTCTCAAGGC+TGG | - | chr2_2:17320448-17320467 | Msa0241610:intron | 45.0% | |
| ! | GTGGTTTTTACCTCCAATGC+AGG | + | chr2_2:17320496-17320515 | None:intergenic | 45.0% |
| TGTGAGAAAGACTCTGAGCT+AGG | - | chr2_2:17320710-17320729 | Msa0241610:CDS | 45.0% | |
| !!! | TGAGCTAGGCTGGTTTGTTT+TGG | - | chr2_2:17320724-17320743 | Msa0241610:CDS | 45.0% |
| !! | GTTTTGGACAAGTGCATGTG+AGG | - | chr2_2:17320740-17320759 | Msa0241610:CDS | 45.0% |
| AGGTTGGAAACACTTTGTGC+TGG | - | chr2_2:17321092-17321111 | Msa0241610:CDS | 45.0% | |
| GGTTGGAAACACTTTGTGCT+GGG | - | chr2_2:17321093-17321112 | Msa0241610:CDS | 45.0% | |
| AAACACTTTGTGCTGGGACT+TGG | - | chr2_2:17321099-17321118 | Msa0241610:CDS | 45.0% | |
| TTGGGAGGTAAGTTACAAGG+AGG | - | chr2_2:17321132-17321151 | Msa0241610:CDS | 45.0% | |
| ! | GGAGTTTGTTCCCAATGATG+AGG | - | chr2_2:17321153-17321172 | Msa0241610:CDS | 45.0% |
| GTGTATGAGCCCTCATCATT+GGG | + | chr2_2:17321166-17321185 | None:intergenic | 45.0% | |
| TGTGTATGAGCCCTCATCAT+TGG | + | chr2_2:17321167-17321186 | None:intergenic | 45.0% | |
| GAAAGGTCGTGTGAGTTGTG+AGG | + | chr2_2:17318750-17318769 | None:intergenic | 50.0% | |
| GTCTCAAGAAGAAGCCCAGA+AGG | - | chr2_2:17318976-17318995 | Msa0241610:CDS | 50.0% | |
| AGAAGAAGCCCAGAAGGTTG+AGG | - | chr2_2:17318982-17319001 | Msa0241610:CDS | 50.0% | |
| GTTGACACTGACACTGACAC+CGG | - | chr2_2:17319915-17319934 | Msa0241610:CDS | 50.0% | |
| CCGGACATGACACTGATATG+TGG | - | chr2_2:17319934-17319953 | Msa0241610:intron | 50.0% | |
| TTGGACACTAGCATGTGTCC+CGG | - | chr2_2:17320037-17320056 | Msa0241610:CDS | 50.0% | |
| AGAAAGACTCTGAGCTAGGC+TGG | - | chr2_2:17320714-17320733 | Msa0241610:CDS | 50.0% | |
| !! | TGCTGGGACTTGGCTGTTTT+GGG | - | chr2_2:17321109-17321128 | Msa0241610:CDS | 50.0% |
| !!! | GGACTTGGCTGTTTTGGGTT+GGG | - | chr2_2:17321114-17321133 | Msa0241610:CDS | 50.0% |
| GGGTTGGGAGGTAAGTTACA+AGG | - | chr2_2:17321129-17321148 | Msa0241610:CDS | 50.0% | |
| ! | GTGCTGGGACTTGGCTGTTT+TGG | - | chr2_2:17321108-17321127 | Msa0241610:CDS | 55.0% |
| !! | GGGACTTGGCTGTTTTGGGT+TGG | - | chr2_2:17321113-17321132 | Msa0241610:CDS | 55.0% |
| !!! | CTTGGCTGTTTTGGGTTGGG+AGG | - | chr2_2:17321117-17321136 | Msa0241610:CDS | 55.0% |
| TGTGGTTGCTCGTCCCGCTA+AGG | - | chr2_2:17320233-17320252 | Msa0241610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 17318708 | 17321603 | 17318708 | ID=Msa0241610;Name=Msa0241610 |
| chr2_2 | mRNA | 17318708 | 17321603 | 17318708 | ID=Msa0241610-mRNA-1;Parent=Msa0241610;Name=Msa0241610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=143|1|1|1|0.75|0.6|5|255|468 |
| chr2_2 | exon | 17318708 | 17319217 | 17318708 | ID=Msa0241610-mRNA-1:exon:7120;Parent=Msa0241610-mRNA-1 |
| chr2_2 | exon | 17319807 | 17319951 | 17319807 | ID=Msa0241610-mRNA-1:exon:7119;Parent=Msa0241610-mRNA-1 |
| chr2_2 | exon | 17320037 | 17320161 | 17320037 | ID=Msa0241610-mRNA-1:exon:7118;Parent=Msa0241610-mRNA-1 |
| chr2_2 | exon | 17320471 | 17321365 | 17320471 | ID=Msa0241610-mRNA-1:exon:7117;Parent=Msa0241610-mRNA-1 |
| chr2_2 | exon | 17321474 | 17321603 | 17321474 | ID=Msa0241610-mRNA-1:exon:7116;Parent=Msa0241610-mRNA-1 |
| chr2_2 | five_prime_UTR | 17321474 | 17321603 | 17321474 | ID=Msa0241610-mRNA-1:five_prime_utr;Parent=Msa0241610-mRNA-1 |
| chr2_2 | five_prime_UTR | 17321353 | 17321365 | 17321353 | ID=Msa0241610-mRNA-1:five_prime_utr;Parent=Msa0241610-mRNA-1 |
| chr2_2 | CDS | 17320471 | 17321352 | 17320471 | ID=Msa0241610-mRNA-1:cds;Parent=Msa0241610-mRNA-1 |
| chr2_2 | CDS | 17320037 | 17320161 | 17320037 | ID=Msa0241610-mRNA-1:cds;Parent=Msa0241610-mRNA-1 |
| chr2_2 | CDS | 17319807 | 17319951 | 17319807 | ID=Msa0241610-mRNA-1:cds;Parent=Msa0241610-mRNA-1 |
| chr2_2 | CDS | 17318963 | 17319217 | 17318963 | ID=Msa0241610-mRNA-1:cds;Parent=Msa0241610-mRNA-1 |
| chr2_2 | three_prime_UTR | 17318708 | 17318962 | 17318708 | ID=Msa0241610-mRNA-1:three_prime_utr;Parent=Msa0241610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
