Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455590 | XP_013451912.1 | 69.481 | 154 | 17 | 3 | 3 | 138 | 1 | 142 | 9.39e-63 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455590 | A0A072UJE8 | 69.481 | 154 | 17 | 3 | 3 | 138 | 1 | 142 | 4.48e-63 | 199 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1455590 | 0.829853 | 4.079912e-55 | -8.615850e-47 |
| Msa0016120 | Msa1455590 | 0.816847 | 4.478459e-52 | -8.615850e-47 |
| Msa0053110 | Msa1455590 | 0.800147 | 1.651760e-48 | -8.615850e-47 |
| Msa0098440 | Msa1455590 | 0.812317 | 4.504868e-51 | -8.615850e-47 |
| Msa0106790 | Msa1455590 | 0.802107 | 6.561575e-49 | -8.615850e-47 |
| Msa0118400 | Msa1455590 | 0.812318 | 4.504325e-51 | -8.615850e-47 |
| Msa1355400 | Msa1455590 | 0.804123 | 2.512951e-49 | -8.615850e-47 |
| Msa1420060 | Msa1455590 | 0.828702 | 7.763704e-55 | -8.615850e-47 |
| Msa1421550 | Msa1455590 | 0.801474 | 8.853411e-49 | -8.615850e-47 |
| Msa1431850 | Msa1455590 | 0.806225 | 9.120600e-50 | -8.615850e-47 |
| Msa0669840 | Msa1455590 | 0.803219 | 3.869811e-49 | -8.615850e-47 |
| Msa0685330 | Msa1455590 | 0.849563 | 2.983446e-60 | -8.615850e-47 |
| Msa0707220 | Msa1455590 | 0.808031 | 3.781046e-50 | -8.615850e-47 |
| Msa0823400 | Msa1455590 | 0.825270 | 5.138070e-54 | -8.615850e-47 |
| Msa0203030 | Msa1455590 | 0.808880 | 2.491558e-50 | -8.615850e-47 |
| Msa0219190 | Msa1455590 | 0.811417 | 7.074057e-51 | -8.615850e-47 |
| Msa1233560 | Msa1455590 | 0.815039 | 1.133913e-51 | -8.615850e-47 |
| Msa1305510 | Msa1455590 | 0.805770 | 1.136870e-49 | -8.615850e-47 |
| Msa0413930 | Msa1455590 | 0.806046 | 9.949082e-50 | -8.615850e-47 |
| Msa0418200 | Msa1455590 | 0.811662 | 6.259411e-51 | -8.615850e-47 |
| Msa0436500 | Msa1455590 | 0.838196 | 3.320335e-57 | -8.615850e-47 |
| Msa0444010 | Msa1455590 | 0.800899 | 1.160896e-48 | -8.615850e-47 |
| Msa1041530 | Msa1455590 | 0.805478 | 1.309317e-49 | -8.615850e-47 |
| Msa1055280 | Msa1455590 | 0.800040 | 1.736404e-48 | -8.615850e-47 |
| Msa0298240 | Msa1455590 | 0.804925 | 1.709423e-49 | -8.615850e-47 |
| Msa0322830 | Msa1455590 | 0.804546 | 2.051369e-49 | -8.615850e-47 |
| Msa0329620 | Msa1455590 | 0.807964 | 3.908841e-50 | -8.615850e-47 |
| Msa0359250 | Msa1455590 | 0.803734 | 3.026468e-49 | -8.615850e-47 |
| Msa1127140 | Msa1455590 | 0.817412 | 3.342479e-52 | -8.615850e-47 |
| Msa1145020 | Msa1455590 | 0.852989 | 3.213688e-61 | -8.615850e-47 |
| Msa1166400 | Msa1455590 | 0.808227 | 3.434630e-50 | -8.615850e-47 |
| Msa1196080 | Msa1455590 | 0.817402 | 3.359720e-52 | -8.615850e-47 |
| Msa0867350 | Msa1455590 | 0.836528 | 8.875261e-57 | -8.615850e-47 |
| Msa0872310 | Msa1455590 | 0.802999 | 4.297210e-49 | -8.615850e-47 |
| Msa0873190 | Msa1455590 | 0.803228 | 3.853480e-49 | -8.615850e-47 |
| Msa0885060 | Msa1455590 | 0.845884 | 3.073161e-59 | -8.615850e-47 |
| Msa0898730 | Msa1455590 | 0.817524 | 3.154145e-52 | -8.615850e-47 |
| Msa0911990 | Msa1455590 | 0.861445 | 1.020546e-63 | -8.615850e-47 |
| Msa0929870 | Msa1455590 | 0.825551 | 4.406931e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455590 | MtrunA17_Chr6g0464801 | 51.282 | 78 | 22 | 2 | 65 | 138 | 7 | 72 | 4.47e-15 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAACATTTGCTTCTTCATT+TGG | 0.284164 | tig0036374:-17542 | Msa1455590:intergenic |
| TTATCAGCACTTTGATAGTT+AGG | 0.296935 | tig0036374:+18524 | Msa1455590:CDS |
| GTACTAAGATCTGATCTTCT+TGG | 0.327969 | tig0036374:-18556 | Msa1455590:intergenic |
| GTACTAAGATCTGATCTTCT+TGG | 0.327969 | tig0036374:-18592 | Msa1455590:intergenic |
| ACATGGATGGTAAAGATAAA+AGG | 0.351663 | tig0036374:-17582 | Msa1455590:intergenic |
| TCAGATCTTAGTACTGGAAT+AGG | 0.426411 | tig0036374:+18601 | Msa1455590:CDS |
| GAAACTTTCTTCAAATGTCT+AGG | 0.440784 | tig0036374:+17626 | Msa1455590:CDS |
| CTTAGTATTGGAAGAGGTCC+AGG | 0.443199 | tig0036374:+18643 | Msa1455590:CDS |
| AGCAATTAAAGCACAAGAAT+CGG | 0.451124 | tig0036374:+17479 | None:intergenic |
| AAACTTTCTTCAAATGTCTA+GGG | 0.469767 | tig0036374:+17627 | Msa1455590:CDS |
| GATGCAGAAGAGAATCTTGA+TGG | 0.479422 | tig0036374:+17659 | Msa1455590:CDS |
| AGAAGATCAGATCTTAGTAT+TGG | 0.495981 | tig0036374:+18631 | Msa1455590:CDS |
| AGAAATGCTGAATTAATCCC+TGG | 0.508797 | tig0036374:-18661 | Msa1455590:intergenic |
| AGAAGATCAGATCTTAGTAC+TGG | 0.511957 | tig0036374:+18559 | Msa1455590:CDS |
| AGAAGATCAGATCTTAGTAC+TGG | 0.511957 | tig0036374:+18595 | Msa1455590:CDS |
| AAAGAATGGTCAACGAGTAA+TGG | 0.539417 | tig0036374:+17707 | Msa1455590:CDS |
| TTTGGAGTAAAGAACATGGA+TGG | 0.540921 | tig0036374:-17595 | Msa1455590:intergenic |
| TCAGATCTTAGTACTGGAAG+AGG | 0.548826 | tig0036374:+18565 | Msa1455590:CDS |
| ACTTTGATAGTTAGGAGAGA+TGG | 0.558375 | tig0036374:+18532 | Msa1455590:CDS |
| AGAAGAGTCAAGAAGAACAA+TGG | 0.568313 | tig0036374:+17508 | Msa1455590:CDS |
| TCAGATCTTAGTATTGGAAG+AGG | 0.585484 | tig0036374:+18637 | Msa1455590:CDS |
| AAGCAAATGTTACAAATGAG+AGG | 0.594342 | tig0036374:+17552 | Msa1455590:CDS |
| GATCTTAGTACTGGAAGAGG+TGG | 0.595804 | tig0036374:+18568 | Msa1455590:CDS |
| GATCTTAGTACTGGAATAGG+TGG | 0.606559 | tig0036374:+18604 | Msa1455590:CDS |
| TTAGTATTGGAAGAGGTCCA+GGG | 0.652914 | tig0036374:+18644 | Msa1455590:CDS |
| TGGATGGTAAAGATAAAAGG+TGG | 0.667132 | tig0036374:-17579 | Msa1455580:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAAATGATTAATT+TGG | + | tig0036374:17880-17899 | Msa1455590:intron | 10.0% |
| !! | TATAAATGTGTTAAAAATAT+GGG | - | tig0036374:18135-18154 | Msa1455590:intergenic | 10.0% |
| !! | TTATAAATGTGTTAAAAATA+TGG | - | tig0036374:18136-18155 | Msa1455590:intergenic | 10.0% |
| !! | AAGTAAAAAAATGATTAATT+TGG | + | tig0036374:17880-17899 | Msa1455590:intron | 10.0% |
| !! | TATAAATGTGTTAAAAATAT+GGG | - | tig0036374:18135-18154 | Msa1455590:intergenic | 10.0% |
| !! | TTATAAATGTGTTAAAAATA+TGG | - | tig0036374:18136-18155 | Msa1455590:intergenic | 10.0% |
| !!! | AATTAAGAGTTGATATTTTT+AGG | + | tig0036374:17926-17945 | Msa1455590:intron | 15.0% |
| !!! | ATTAAGAGTTGATATTTTTA+GGG | + | tig0036374:17927-17946 | Msa1455590:intron | 15.0% |
| !!! | AATTAAGAGTTGATATTTTT+AGG | + | tig0036374:17926-17945 | Msa1455590:intron | 15.0% |
| !!! | ATTAAGAGTTGATATTTTTA+GGG | + | tig0036374:17927-17946 | Msa1455590:intron | 15.0% |
| !!! | AGAAAGTTTCAAGAAATTTT+TGG | - | tig0036374:17616-17635 | Msa1455590:intergenic | 20.0% |
| !!! | AGAAAGTTTCAAGAAATTTT+TGG | - | tig0036374:17616-17635 | Msa1455590:intergenic | 20.0% |
| !!! | AATTTTTGGAGTAAAGAACA+TGG | - | tig0036374:17602-17621 | Msa1455590:intergenic | 25.0% |
| ! | AAACTTTCTTCAAATGTCTA+GGG | + | tig0036374:17627-17646 | Msa1455590:CDS | 25.0% |
| !!! | AATGTTAACTTGTGTCATTT+TGG | + | tig0036374:17951-17970 | Msa1455590:intron | 25.0% |
| ! | ACAACTAAATGTTAGTATGT+TGG | + | tig0036374:18209-18228 | Msa1455590:intron | 25.0% |
| !! | TTCAGATTAAGTTGTTAATG+AGG | + | tig0036374:18267-18286 | Msa1455590:intron | 25.0% |
| !!! | AGTTGTTAATGAGGTTTTTT+TGG | + | tig0036374:18276-18295 | Msa1455590:intron | 25.0% |
| ! | AGGTTAAACACAAATCATTT+AGG | + | tig0036374:18403-18422 | Msa1455590:intron | 25.0% |
| !! | GAAAATCGAAAATCGAATTT+TGG | + | tig0036374:18425-18444 | Msa1455590:intron | 25.0% |
| !! | ATATTCTAGAGAAAGATTGT+TGG | - | tig0036374:18453-18472 | Msa1455590:intergenic | 25.0% |
| !!! | AATTTTTGGAGTAAAGAACA+TGG | - | tig0036374:17602-17621 | Msa1455590:intergenic | 25.0% |
| ! | AAACTTTCTTCAAATGTCTA+GGG | + | tig0036374:17627-17646 | Msa1455590:CDS | 25.0% |
| !!! | AATGTTAACTTGTGTCATTT+TGG | + | tig0036374:17951-17970 | Msa1455590:intron | 25.0% |
| ! | ACAACTAAATGTTAGTATGT+TGG | + | tig0036374:18209-18228 | Msa1455590:intron | 25.0% |
| !! | TTCAGATTAAGTTGTTAATG+AGG | + | tig0036374:18267-18286 | Msa1455590:intron | 25.0% |
| !!! | AGTTGTTAATGAGGTTTTTT+TGG | + | tig0036374:18276-18295 | Msa1455590:intron | 25.0% |
| ! | AGGTTAAACACAAATCATTT+AGG | + | tig0036374:18403-18422 | Msa1455590:intron | 25.0% |
| !! | GAAAATCGAAAATCGAATTT+TGG | + | tig0036374:18425-18444 | Msa1455590:intron | 25.0% |
| !! | ATATTCTAGAGAAAGATTGT+TGG | - | tig0036374:18453-18472 | Msa1455590:intergenic | 25.0% |
| GTAACATTTGCTTCTTCATT+TGG | - | tig0036374:17545-17564 | Msa1455590:intergenic | 30.0% | |
| AAGCAAATGTTACAAATGAG+AGG | + | tig0036374:17552-17571 | Msa1455590:CDS | 30.0% | |
| ACATGGATGGTAAAGATAAA+AGG | - | tig0036374:17585-17604 | Msa1455590:intergenic | 30.0% | |
| GAAACTTTCTTCAAATGTCT+AGG | + | tig0036374:17626-17645 | Msa1455590:CDS | 30.0% | |
| ! | ATATGGGTTATGTTAACTTG+TGG | - | tig0036374:18119-18138 | Msa1455590:intergenic | 30.0% |
| ! | TTAGTATGTTGGTGAATATG+TGG | + | tig0036374:18220-18239 | Msa1455590:intron | 30.0% |
| ACAACTTAATCTGAATGACT+TGG | - | tig0036374:18262-18281 | Msa1455590:intergenic | 30.0% | |
| ! | CTGTATCGTTCCAATTTTAT+CGG | + | tig0036374:18353-18372 | Msa1455590:intron | 30.0% |
| ! | TTATCAGCACTTTGATAGTT+AGG | + | tig0036374:18524-18543 | Msa1455590:CDS | 30.0% |
| AGAAGATCAGATCTTAGTAT+TGG | + | tig0036374:18631-18650 | Msa1455590:CDS | 30.0% | |
| GTAACATTTGCTTCTTCATT+TGG | - | tig0036374:17545-17564 | Msa1455590:intergenic | 30.0% | |
| AAGCAAATGTTACAAATGAG+AGG | + | tig0036374:17552-17571 | Msa1455590:CDS | 30.0% | |
| ACATGGATGGTAAAGATAAA+AGG | - | tig0036374:17585-17604 | Msa1455590:intergenic | 30.0% | |
| GAAACTTTCTTCAAATGTCT+AGG | + | tig0036374:17626-17645 | Msa1455590:CDS | 30.0% | |
| ! | ATATGGGTTATGTTAACTTG+TGG | - | tig0036374:18119-18138 | Msa1455590:intergenic | 30.0% |
| ! | TTAGTATGTTGGTGAATATG+TGG | + | tig0036374:18220-18239 | Msa1455590:intron | 30.0% |
| ACAACTTAATCTGAATGACT+TGG | - | tig0036374:18262-18281 | Msa1455590:intergenic | 30.0% | |
| ! | CTGTATCGTTCCAATTTTAT+CGG | + | tig0036374:18353-18372 | Msa1455590:intron | 30.0% |
| ! | TTATCAGCACTTTGATAGTT+AGG | + | tig0036374:18524-18543 | Msa1455590:CDS | 30.0% |
| AGAAGATCAGATCTTAGTAT+TGG | + | tig0036374:18631-18650 | Msa1455590:CDS | 30.0% | |
| AGAAGAGTCAAGAAGAACAA+TGG | + | tig0036374:17508-17527 | Msa1455590:CDS | 35.0% | |
| TGGATGGTAAAGATAAAAGG+TGG | - | tig0036374:17582-17601 | Msa1455590:intergenic | 35.0% | |
| ! | TTTGGAGTAAAGAACATGGA+TGG | - | tig0036374:17598-17617 | Msa1455590:intergenic | 35.0% |
| CATGTGCAGAACAAAAAGAA+TGG | + | tig0036374:17693-17712 | Msa1455590:CDS | 35.0% | |
| AAAGAATGGTCAACGAGTAA+TGG | + | tig0036374:17707-17726 | Msa1455590:CDS | 35.0% | |
| GTTTCTTAACTTATGCCCTA+AGG | + | tig0036374:18093-18112 | Msa1455590:intron | 35.0% | |
| !! | TATGTTAACTTGTGGCCTTA+GGG | - | tig0036374:18111-18130 | Msa1455590:intergenic | 35.0% |
| !! | TTATGTTAACTTGTGGCCTT+AGG | - | tig0036374:18112-18131 | Msa1455590:intergenic | 35.0% |
| !! | CTGAATGACTTGGTTCTATA+AGG | - | tig0036374:18252-18271 | Msa1455590:intergenic | 35.0% |
| TCATTAACAACTGTCTCTTC+GGG | - | tig0036374:18384-18403 | Msa1455590:intergenic | 35.0% | |
| CTCATTAACAACTGTCTCTT+CGG | - | tig0036374:18385-18404 | Msa1455590:intergenic | 35.0% | |
| ! | ACTTTGATAGTTAGGAGAGA+TGG | + | tig0036374:18532-18551 | Msa1455590:CDS | 35.0% |
| GTACTAAGATCTGATCTTCT+TGG | - | tig0036374:18559-18578 | Msa1455590:intergenic | 35.0% | |
| AGAAGATCAGATCTTAGTAC+TGG | + | tig0036374:18559-18578 | Msa1455590:CDS | 35.0% | |
| GTACTAAGATCTGATCTTCT+TGG | - | tig0036374:18559-18578 | Msa1455590:intergenic | 35.0% | |
| AGAAGATCAGATCTTAGTAC+TGG | + | tig0036374:18559-18578 | Msa1455590:CDS | 35.0% | |
| ! | TCAGATCTTAGTACTGGAAT+AGG | + | tig0036374:18601-18620 | Msa1455590:CDS | 35.0% |
| ! | TCAGATCTTAGTATTGGAAG+AGG | + | tig0036374:18637-18656 | Msa1455590:CDS | 35.0% |
| AGAAATGCTGAATTAATCCC+TGG | - | tig0036374:18664-18683 | Msa1455590:intergenic | 35.0% | |
| AGAAGAGTCAAGAAGAACAA+TGG | + | tig0036374:17508-17527 | Msa1455590:CDS | 35.0% | |
| TGGATGGTAAAGATAAAAGG+TGG | - | tig0036374:17582-17601 | Msa1455590:intergenic | 35.0% | |
| ! | TTTGGAGTAAAGAACATGGA+TGG | - | tig0036374:17598-17617 | Msa1455590:intergenic | 35.0% |
| CATGTGCAGAACAAAAAGAA+TGG | + | tig0036374:17693-17712 | Msa1455590:CDS | 35.0% | |
| AAAGAATGGTCAACGAGTAA+TGG | + | tig0036374:17707-17726 | Msa1455590:CDS | 35.0% | |
| GTTTCTTAACTTATGCCCTA+AGG | + | tig0036374:18093-18112 | Msa1455590:intron | 35.0% | |
| !! | TATGTTAACTTGTGGCCTTA+GGG | - | tig0036374:18111-18130 | Msa1455590:intergenic | 35.0% |
| !! | TTATGTTAACTTGTGGCCTT+AGG | - | tig0036374:18112-18131 | Msa1455590:intergenic | 35.0% |
| !! | CTGAATGACTTGGTTCTATA+AGG | - | tig0036374:18252-18271 | Msa1455590:intergenic | 35.0% |
| TCATTAACAACTGTCTCTTC+GGG | - | tig0036374:18384-18403 | Msa1455590:intergenic | 35.0% | |
| CTCATTAACAACTGTCTCTT+CGG | - | tig0036374:18385-18404 | Msa1455590:intergenic | 35.0% | |
| ! | ACTTTGATAGTTAGGAGAGA+TGG | + | tig0036374:18532-18551 | Msa1455590:CDS | 35.0% |
| GTACTAAGATCTGATCTTCT+TGG | - | tig0036374:18559-18578 | Msa1455590:intergenic | 35.0% | |
| AGAAGATCAGATCTTAGTAC+TGG | + | tig0036374:18559-18578 | Msa1455590:CDS | 35.0% | |
| GTACTAAGATCTGATCTTCT+TGG | - | tig0036374:18559-18578 | Msa1455590:intergenic | 35.0% | |
| AGAAGATCAGATCTTAGTAC+TGG | + | tig0036374:18559-18578 | Msa1455590:CDS | 35.0% | |
| ! | TCAGATCTTAGTACTGGAAT+AGG | + | tig0036374:18601-18620 | Msa1455590:CDS | 35.0% |
| ! | TCAGATCTTAGTATTGGAAG+AGG | + | tig0036374:18637-18656 | Msa1455590:CDS | 35.0% |
| AGAAATGCTGAATTAATCCC+TGG | - | tig0036374:18664-18683 | Msa1455590:intergenic | 35.0% | |
| GATGCAGAAGAGAATCTTGA+TGG | + | tig0036374:17659-17678 | Msa1455590:CDS | 40.0% | |
| CATTAACAACTGTCTCTTCG+GGG | - | tig0036374:18383-18402 | Msa1455590:intergenic | 40.0% | |
| CGAAGAGACAGTTGTTAATG+AGG | + | tig0036374:18383-18402 | Msa1455590:intron | 40.0% | |
| ! | TCAGATCTTAGTACTGGAAG+AGG | + | tig0036374:18565-18584 | Msa1455590:CDS | 40.0% |
| ! | GATCTTAGTACTGGAATAGG+TGG | + | tig0036374:18604-18623 | Msa1455590:CDS | 40.0% |
| ! | TTAGTATTGGAAGAGGTCCA+GGG | + | tig0036374:18644-18663 | Msa1455590:CDS | 40.0% |
| GATGCAGAAGAGAATCTTGA+TGG | + | tig0036374:17659-17678 | Msa1455590:CDS | 40.0% | |
| CATTAACAACTGTCTCTTCG+GGG | - | tig0036374:18383-18402 | Msa1455590:intergenic | 40.0% | |
| CGAAGAGACAGTTGTTAATG+AGG | + | tig0036374:18383-18402 | Msa1455590:intron | 40.0% | |
| ! | TCAGATCTTAGTACTGGAAG+AGG | + | tig0036374:18565-18584 | Msa1455590:CDS | 40.0% |
| ! | GATCTTAGTACTGGAATAGG+TGG | + | tig0036374:18604-18623 | Msa1455590:CDS | 40.0% |
| ! | TTAGTATTGGAAGAGGTCCA+GGG | + | tig0036374:18644-18663 | Msa1455590:CDS | 40.0% |
| TCGGGGACATCCGATAAAAT+TGG | - | tig0036374:18366-18385 | Msa1455590:intergenic | 45.0% | |
| ! | GATCTTAGTACTGGAAGAGG+TGG | + | tig0036374:18568-18587 | Msa1455590:CDS | 45.0% |
| ! | CTTAGTATTGGAAGAGGTCC+AGG | + | tig0036374:18643-18662 | Msa1455590:CDS | 45.0% |
| TCGGGGACATCCGATAAAAT+TGG | - | tig0036374:18366-18385 | Msa1455590:intergenic | 45.0% | |
| ! | GATCTTAGTACTGGAAGAGG+TGG | + | tig0036374:18568-18587 | Msa1455590:CDS | 45.0% |
| ! | CTTAGTATTGGAAGAGGTCC+AGG | + | tig0036374:18643-18662 | Msa1455590:CDS | 45.0% |
| !!! | TTGTTTTTTTTTTTTTATTT+TGG | + | tig0036374:17815-17834 | Msa1455590:intron | 5.0% |
| !!! | TGTTTTTTTTTTTTTATTTT+GGG | + | tig0036374:17816-17835 | Msa1455590:intron | 5.0% |
| !!! | TAATTAGTTTTTTTTTTTTT+GGG | - | tig0036374:18174-18193 | Msa1455590:intergenic | 5.0% |
| !!! | ATAATTAGTTTTTTTTTTTT+TGG | - | tig0036374:18175-18194 | Msa1455590:intergenic | 5.0% |
| !!! | TTGTTTTTTTTTTTTTATTT+TGG | + | tig0036374:17815-17834 | Msa1455590:intron | 5.0% |
| !!! | TGTTTTTTTTTTTTTATTTT+GGG | + | tig0036374:17816-17835 | Msa1455590:intron | 5.0% |
| !!! | TAATTAGTTTTTTTTTTTTT+GGG | - | tig0036374:18174-18193 | Msa1455590:intergenic | 5.0% |
| !!! | ATAATTAGTTTTTTTTTTTT+TGG | - | tig0036374:18175-18194 | Msa1455590:intergenic | 5.0% |
| TGTGCATATCATCCTTGCGC+AGG | + | tig0036374:18313-18332 | Msa1455590:intron | 50.0% | |
| GTGCATATCATCCTTGCGCA+GGG | + | tig0036374:18314-18333 | Msa1455590:intron | 50.0% | |
| TGCATATCATCCTTGCGCAG+GGG | + | tig0036374:18315-18334 | Msa1455590:intron | 50.0% | |
| TGTGCATATCATCCTTGCGC+AGG | + | tig0036374:18313-18332 | Msa1455590:intron | 50.0% | |
| GTGCATATCATCCTTGCGCA+GGG | + | tig0036374:18314-18333 | Msa1455590:intron | 50.0% | |
| TGCATATCATCCTTGCGCAG+GGG | + | tig0036374:18315-18334 | Msa1455590:intron | 50.0% | |
| ATTAGCATGACCCCTGCGCA+AGG | - | tig0036374:18328-18347 | Msa1455590:intergenic | 55.0% | |
| ATTAGCATGACCCCTGCGCA+AGG | - | tig0036374:18328-18347 | Msa1455590:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0036374 | gene | 17491 | 18687 | 17491 | ID=Msa1455590;Name=Msa1455590 |
| tig0036374 | mRNA | 17491 | 18687 | 17491 | ID=Msa1455590-mRNA-1;Parent=Msa1455590;Name=Msa1455590-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0|1|1|1|2|0|138 |
| tig0036374 | exon | 17491 | 17739 | 17491 | ID=Msa1455590-mRNA-1:exon:20322;Parent=Msa1455590-mRNA-1 |
| tig0036374 | exon | 18520 | 18687 | 18520 | ID=Msa1455590-mRNA-1:exon:20323;Parent=Msa1455590-mRNA-1 |
| tig0036374 | CDS | 17491 | 17739 | 17491 | ID=Msa1455590-mRNA-1:cds;Parent=Msa1455590-mRNA-1 |
| tig0036374 | CDS | 18520 | 18687 | 18520 | ID=Msa1455590-mRNA-1:cds;Parent=Msa1455590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
