Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0005050 | 0.822591 | 2.182152e-53 | -8.615850e-47 |
| Msa0002930 | Msa0016120 | 0.842786 | 2.090637e-58 | -8.615850e-47 |
| Msa0002930 | Msa0017510 | 0.839706 | 1.349313e-57 | -8.615850e-47 |
| Msa0002930 | Msa0022640 | 0.841314 | 5.122446e-58 | -8.615850e-47 |
| Msa0002930 | Msa0029910 | 0.814038 | 1.888130e-51 | -8.615850e-47 |
| Msa0002930 | Msa0036430 | 0.838356 | 3.018612e-57 | -8.615850e-47 |
| Msa0002930 | Msa0040450 | 0.817125 | 3.878649e-52 | -8.615850e-47 |
| Msa0002930 | Msa0044020 | 0.806112 | 9.636308e-50 | -8.615850e-47 |
| Msa0002930 | Msa0050040 | 0.826373 | 2.811683e-54 | -8.615850e-47 |
| Msa0002930 | Msa0053110 | 0.840080 | 1.078689e-57 | -8.615850e-47 |
| Msa0002930 | Msa0062440 | 0.818844 | 1.585247e-52 | -8.615850e-47 |
| Msa0002930 | Msa0072810 | 0.812975 | 3.234586e-51 | -8.615850e-47 |
| Msa0002930 | Msa0077120 | 0.821167 | 4.662415e-53 | -8.615850e-47 |
| Msa0002930 | Msa0081360 | 0.807369 | 5.228339e-50 | -8.615850e-47 |
| Msa0002930 | Msa0081480 | 0.800316 | 1.526119e-48 | -8.615850e-47 |
| Msa0002930 | Msa0084500 | 0.823079 | 1.680353e-53 | -8.615850e-47 |
| Msa0002930 | Msa0085360 | -0.805622 | 1.221486e-49 | -8.615850e-47 |
| Msa0002930 | Msa0098440 | 0.839766 | 1.302240e-57 | -8.615850e-47 |
| Msa0002930 | Msa0102990 | 0.826389 | 2.786306e-54 | -8.615850e-47 |
| Msa0002930 | Msa0103000 | 0.834038 | 3.776087e-56 | -8.615850e-47 |
| Msa0002930 | Msa0106790 | 0.894741 | 1.854372e-75 | -8.615850e-47 |
| Msa0002930 | Msa0109880 | 0.816713 | 4.798007e-52 | -8.615850e-47 |
| Msa0002930 | Msa0110970 | 0.842403 | 2.641817e-58 | -8.615850e-47 |
| Msa0002930 | Msa0118380 | 0.807405 | 5.136163e-50 | -8.615850e-47 |
| Msa0002930 | Msa0118400 | 0.869773 | 2.408259e-66 | -8.615850e-47 |
| Msa0002930 | Msa0130570 | 0.841365 | 4.965960e-58 | -8.615850e-47 |
| Msa0002930 | Msa0141600 | 0.838370 | 2.994271e-57 | -8.615850e-47 |
| Msa0002930 | Msa0147560 | 0.816582 | 5.134005e-52 | -8.615850e-47 |
| Msa0002930 | Msa0152500 | 0.807126 | 5.887024e-50 | -8.615850e-47 |
| Msa0002930 | Msa0153420 | 0.912062 | 2.994301e-83 | -8.615850e-47 |
| Msa0002930 | Msa0157290 | 0.839408 | 1.613133e-57 | -8.615850e-47 |
| Msa0002930 | Msa0161680 | 0.846822 | 1.705851e-59 | -8.615850e-47 |
| Msa0002930 | Msa0169920 | 0.802394 | 5.728164e-49 | -8.615850e-47 |
| Msa0002930 | Msa0173990 | 0.834432 | 3.007792e-56 | -8.615850e-47 |
| Msa0002930 | Msa0176470 | 0.824932 | 6.172333e-54 | -8.615850e-47 |
| Msa0002930 | Msa0193120 | 0.815186 | 1.051746e-51 | -8.615850e-47 |
| Msa0002930 | Msa0197660 | 0.813217 | 2.861631e-51 | -8.615850e-47 |
| Msa0002930 | Msa0197930 | 0.812938 | 3.296154e-51 | -8.615850e-47 |
| Msa0002930 | Msa0203030 | 0.863386 | 2.584291e-64 | -8.615850e-47 |
| Msa0002930 | Msa0203160 | 0.825704 | 4.055189e-54 | -8.615850e-47 |
| Msa0002930 | Msa0212150 | 0.816728 | 4.761888e-52 | -8.615850e-47 |
| Msa0002930 | Msa0218780 | 0.800270 | 1.559157e-48 | -8.615850e-47 |
| Msa0002930 | Msa0219190 | 0.836214 | 1.066930e-56 | -8.615850e-47 |
| Msa0002930 | Msa0221290 | 0.829201 | 5.875879e-55 | -8.615850e-47 |
| Msa0002930 | Msa0235890 | 0.816060 | 6.719219e-52 | -8.615850e-47 |
| Msa0002930 | Msa0236110 | 0.800992 | 1.110979e-48 | -8.615850e-47 |
| Msa0002930 | Msa0239570 | 0.800284 | 1.548946e-48 | -8.615850e-47 |
| Msa0002930 | Msa0239800 | 0.823494 | 1.344302e-53 | -8.615850e-47 |
| Msa0002930 | Msa0242270 | 0.800376 | 1.483511e-48 | -8.615850e-47 |
| Msa0002930 | Msa0243100 | 0.812611 | 3.885721e-51 | -8.615850e-47 |
| Msa0002930 | Msa0251240 | 0.824060 | 9.903081e-54 | -8.615850e-47 |
| Msa0002930 | Msa0252770 | 0.804237 | 2.378735e-49 | -8.615850e-47 |
| Msa0002930 | Msa0261340 | 0.801586 | 8.397688e-49 | -8.615850e-47 |
| Msa0002930 | Msa0287650 | 0.801705 | 7.937105e-49 | -8.615850e-47 |
| Msa0002930 | Msa0298240 | 0.821876 | 3.197450e-53 | -8.615850e-47 |
| Msa0002930 | Msa0306120 | 0.803816 | 2.909492e-49 | -8.615850e-47 |
| Msa0002930 | Msa0306300 | 0.811050 | 8.497694e-51 | -8.615850e-47 |
| Msa0002930 | Msa0311860 | 0.808153 | 3.561477e-50 | -8.615850e-47 |
| Msa0002930 | Msa0314630 | 0.809306 | 2.019692e-50 | -8.615850e-47 |
| Msa0002930 | Msa0317250 | 0.805479 | 1.308771e-49 | -8.615850e-47 |
| Msa0002930 | Msa0317510 | 0.821971 | 3.039445e-53 | -8.615850e-47 |
| Msa0002930 | Msa0320100 | 0.804517 | 2.080188e-49 | -8.615850e-47 |
| Msa0002930 | Msa0322830 | 0.863918 | 1.766718e-64 | -8.615850e-47 |
| Msa0002930 | Msa0322840 | 0.863218 | 2.911717e-64 | -8.615850e-47 |
| Msa0002930 | Msa0322860 | 0.819522 | 1.111417e-52 | -8.615850e-47 |
| Msa0002930 | Msa0323610 | 0.844872 | 5.777230e-59 | -8.615850e-47 |
| Msa0002930 | Msa0329620 | 0.834190 | 3.458575e-56 | -8.615850e-47 |
| Msa0002930 | Msa0337850 | 0.802825 | 4.669129e-49 | -8.615850e-47 |
| Msa0002930 | Msa0359250 | 0.804540 | 2.056946e-49 | -8.615850e-47 |
| Msa0002930 | Msa0362780 | 0.841962 | 3.455837e-58 | -8.615850e-47 |
| Msa0002930 | Msa0373960 | 0.841454 | 4.705381e-58 | -8.615850e-47 |
| Msa0002930 | Msa0378500 | 0.818649 | 1.755466e-52 | -8.615850e-47 |
| Msa0002930 | Msa0392420 | 0.803556 | 3.294814e-49 | -8.615850e-47 |
| Msa0002930 | Msa0392490 | 0.802038 | 6.781224e-49 | -8.615850e-47 |
| Msa0002930 | Msa0406000 | 0.807108 | 5.936277e-50 | -8.615850e-47 |
| Msa0002930 | Msa0413930 | 0.805491 | 1.301230e-49 | -8.615850e-47 |
| Msa0002930 | Msa0418200 | 0.809428 | 1.901466e-50 | -8.615850e-47 |
| Msa0002930 | Msa0419820 | 0.842872 | 1.983434e-58 | -8.615850e-47 |
| Msa0002930 | Msa0433640 | 0.806374 | 8.483401e-50 | -8.615850e-47 |
| Msa0002930 | Msa0436460 | 0.812782 | 3.565651e-51 | -8.615850e-47 |
| Msa0002930 | Msa0436500 | 0.890999 | 5.923991e-74 | -8.615850e-47 |
| Msa0002930 | Msa0451400 | 0.816904 | 4.348226e-52 | -8.615850e-47 |
| Msa0002930 | Msa0459770 | -0.808366 | 3.208121e-50 | -8.615850e-47 |
| Msa0002930 | Msa0464540 | 0.810147 | 1.331653e-50 | -8.615850e-47 |
| Msa0002930 | Msa0469260 | 0.806640 | 7.455479e-50 | -8.615850e-47 |
| Msa0002930 | Msa0480980 | 0.806512 | 7.935970e-50 | -8.615850e-47 |
| Msa0002930 | Msa0483860 | 0.807046 | 6.118606e-50 | -8.615850e-47 |
| Msa0002930 | Msa0487570 | 0.807501 | 4.901604e-50 | -8.615850e-47 |
| Msa0002930 | Msa0487630 | 0.807318 | 5.360489e-50 | -8.615850e-47 |
| Msa0002930 | Msa0503580 | 0.806971 | 6.348110e-50 | -8.615850e-47 |
| Msa0002930 | Msa0509790 | 0.829476 | 5.040455e-55 | -8.615850e-47 |
| Msa0002930 | Msa0516320 | 0.806472 | 8.092986e-50 | -8.615850e-47 |
| Msa0002930 | Msa0517330 | 0.803266 | 3.784368e-49 | -8.615850e-47 |
| Msa0002930 | Msa0521500 | 0.813436 | 2.561866e-51 | -8.615850e-47 |
| Msa0002930 | Msa0521540 | 0.801131 | 1.040478e-48 | -8.615850e-47 |
| Msa0002930 | Msa0535040 | 0.832285 | 1.031715e-55 | -8.615850e-47 |
| Msa0002930 | Msa0537920 | 0.832081 | 1.158268e-55 | -8.615850e-47 |
| Msa0002930 | Msa0538220 | 0.820930 | 5.286168e-53 | -8.615850e-47 |
| Msa0002930 | Msa0571140 | 0.827049 | 1.939111e-54 | -8.615850e-47 |
| Msa0002930 | Msa0578040 | 0.803561 | 3.287790e-49 | -8.615850e-47 |
| Msa0002930 | Msa0581760 | 0.810718 | 1.002626e-50 | -8.615850e-47 |
| Msa0002930 | Msa0584130 | 0.809296 | 2.029575e-50 | -8.615850e-47 |
| Msa0002930 | Msa0594090 | 0.805603 | 1.232840e-49 | -8.615850e-47 |
| Msa0002930 | Msa0601850 | 0.814771 | 1.299886e-51 | -8.615850e-47 |
| Msa0002930 | Msa0602250 | 0.800801 | 1.215530e-48 | -8.615850e-47 |
| Msa0002930 | Msa0616220 | 0.807046 | 6.120704e-50 | -8.615850e-47 |
| Msa0002930 | Msa0620240 | 0.824424 | 8.132633e-54 | -8.615850e-47 |
| Msa0002930 | Msa0625890 | 0.800909 | 1.155036e-48 | -8.615850e-47 |
| Msa0002930 | Msa0631120 | 0.802110 | 6.554253e-49 | -8.615850e-47 |
| Msa0002930 | Msa0641250 | 0.817554 | 3.105156e-52 | -8.615850e-47 |
| Msa0002930 | Msa0649970 | 0.801288 | 9.664167e-49 | -8.615850e-47 |
| Msa0002930 | Msa0657970 | 0.803526 | 3.342342e-49 | -8.615850e-47 |
| Msa0002930 | Msa0663680 | 0.802338 | 5.883319e-49 | -8.615850e-47 |
| Msa0002930 | Msa0682530 | 0.814254 | 1.691855e-51 | -8.615850e-47 |
| Msa0002930 | Msa0696450 | 0.809505 | 1.830711e-50 | -8.615850e-47 |
| Msa0002930 | Msa0707220 | 0.823048 | 1.708157e-53 | -8.615850e-47 |
| Msa0002930 | Msa0708520 | 0.807566 | 4.747761e-50 | -8.615850e-47 |
| Msa0002930 | Msa0716760 | 0.809359 | 1.967500e-50 | -8.615850e-47 |
| Msa0002930 | Msa0717260 | 0.804434 | 2.164559e-49 | -8.615850e-47 |
| Msa0002930 | Msa0734660 | 0.812124 | 4.963630e-51 | -8.615850e-47 |
| Msa0002930 | Msa0739580 | 0.800526 | 1.383001e-48 | -8.615850e-47 |
| Msa0002930 | Msa0740430 | 0.828751 | 7.554768e-55 | -8.615850e-47 |
| Msa0002930 | Msa0741900 | 0.816215 | 6.203806e-52 | -8.615850e-47 |
| Msa0002930 | Msa0742180 | 0.816422 | 5.576123e-52 | -8.615850e-47 |
| Msa0002930 | Msa0747780 | 0.832540 | 8.916167e-56 | -8.615850e-47 |
| Msa0002930 | Msa0756630 | -0.805937 | 1.048516e-49 | -8.615850e-47 |
| Msa0002930 | Msa0761580 | 0.801666 | 8.083358e-49 | -8.615850e-47 |
| Msa0002930 | Msa0776220 | 0.812040 | 5.177394e-51 | -8.615850e-47 |
| Msa0002930 | Msa0810020 | 0.803035 | 4.223895e-49 | -8.615850e-47 |
| Msa0002930 | Msa0812990 | 0.804432 | 2.166820e-49 | -8.615850e-47 |
| Msa0002930 | Msa0813670 | 0.811217 | 7.817048e-51 | -8.615850e-47 |
| Msa0002930 | Msa0822990 | 0.805754 | 1.146086e-49 | -8.615850e-47 |
| Msa0002930 | Msa0823400 | 0.827387 | 1.609131e-54 | -8.615850e-47 |
| Msa0002930 | Msa0824680 | 0.827175 | 1.808621e-54 | -8.615850e-47 |
| Msa0002930 | Msa0843640 | 0.817472 | 3.239242e-52 | -8.615850e-47 |
| Msa0002930 | Msa0844560 | 0.819309 | 1.242934e-52 | -8.615850e-47 |
| Msa0002930 | Msa0850960 | 0.803321 | 3.685198e-49 | -8.615850e-47 |
| Msa0002930 | Msa0853540 | 0.834925 | 2.260946e-56 | -8.615850e-47 |
| Msa0002930 | Msa0862100 | 0.816936 | 4.276029e-52 | -8.615850e-47 |
| Msa0002930 | Msa0867350 | 0.822386 | 2.435502e-53 | -8.615850e-47 |
| Msa0002930 | Msa0867890 | 0.803404 | 3.543119e-49 | -8.615850e-47 |
| Msa0002930 | Msa0872310 | 0.836592 | 8.551296e-57 | -8.615850e-47 |
| Msa0002930 | Msa0873190 | 0.812156 | 4.884922e-51 | -8.615850e-47 |
| Msa0002930 | Msa0876200 | 0.811304 | 7.484566e-51 | -8.615850e-47 |
| Msa0002930 | Msa0880140 | 0.841537 | 4.475578e-58 | -8.615850e-47 |
| Msa0002930 | Msa0880440 | 0.809649 | 1.704788e-50 | -8.615850e-47 |
| Msa0002930 | Msa0885060 | 0.860385 | 2.142681e-63 | -8.615850e-47 |
| Msa0002930 | Msa0895790 | 0.802677 | 5.007890e-49 | -8.615850e-47 |
| Msa0002930 | Msa0898730 | 0.807260 | 5.514320e-50 | -8.615850e-47 |
| Msa0002930 | Msa0899950 | 0.802570 | 5.269588e-49 | -8.615850e-47 |
| Msa0002930 | Msa0905550 | 0.818571 | 1.828802e-52 | -8.615850e-47 |
| Msa0002930 | Msa0909000 | -0.811518 | 6.725867e-51 | -8.615850e-47 |
| Msa0002930 | Msa0911990 | 0.844285 | 8.310567e-59 | -8.615850e-47 |
| Msa0002930 | Msa0936410 | 0.805286 | 1.436216e-49 | -8.615850e-47 |
| Msa0002930 | Msa0937550 | 0.823017 | 1.736975e-53 | -8.615850e-47 |
| Msa0002930 | Msa0941820 | 0.804435 | 2.162790e-49 | -8.615850e-47 |
| Msa0002930 | Msa0965310 | 0.811709 | 6.113819e-51 | -8.615850e-47 |
| Msa0002930 | Msa0973250 | 0.803084 | 4.127269e-49 | -8.615850e-47 |
| Msa0002930 | Msa0979510 | 0.805296 | 1.429224e-49 | -8.615850e-47 |
| Msa0002930 | Msa0999350 | 0.824387 | 8.295973e-54 | -8.615850e-47 |
| Msa0002930 | Msa0999360 | 0.867344 | 1.467081e-65 | -8.615850e-47 |
| Msa0002930 | Msa0999400 | 0.814829 | 1.262069e-51 | -8.615850e-47 |
| Msa0002930 | Msa0999410 | 0.847618 | 1.032027e-59 | -8.615850e-47 |
| Msa0002930 | Msa1009000 | 0.800010 | 1.760933e-48 | -8.615850e-47 |
| Msa0002930 | Msa1010110 | 0.829549 | 4.837928e-55 | -8.615850e-47 |
| Msa0002930 | Msa1012810 | 0.800375 | 1.484262e-48 | -8.615850e-47 |
| Msa0002930 | Msa1014270 | 0.804768 | 1.843207e-49 | -8.615850e-47 |
| Msa0002930 | Msa1020720 | 0.803709 | 3.062613e-49 | -8.615850e-47 |
| Msa0002930 | Msa1023400 | 0.806228 | 9.108155e-50 | -8.615850e-47 |
| Msa0002930 | Msa1027290 | 0.812493 | 4.123448e-51 | -8.615850e-47 |
| Msa0002930 | Msa1033560 | 0.811825 | 5.768005e-51 | -8.615850e-47 |
| Msa0002930 | Msa1034680 | 0.811009 | 8.672873e-51 | -8.615850e-47 |
| Msa0002930 | Msa1041530 | 0.839863 | 1.228471e-57 | -8.615850e-47 |
| Msa0002930 | Msa1042670 | 0.811226 | 7.782097e-51 | -8.615850e-47 |
| Msa0002930 | Msa1046470 | 0.802300 | 5.990510e-49 | -8.615850e-47 |
| Msa0002930 | Msa1055260 | 0.821444 | 4.024494e-53 | -8.615850e-47 |
| Msa0002930 | Msa1055280 | 0.827954 | 1.175970e-54 | -8.615850e-47 |
| Msa0002930 | Msa1066490 | 0.806273 | 8.913208e-50 | -8.615850e-47 |
| Msa0002930 | Msa1073340 | 0.808330 | 3.265289e-50 | -8.615850e-47 |
| Msa0002930 | Msa1081570 | 0.825874 | 3.695271e-54 | -8.615850e-47 |
| Msa0002930 | Msa1097560 | 0.811674 | 6.222349e-51 | -8.615850e-47 |
| Msa0002930 | Msa1097640 | 0.805950 | 1.042200e-49 | -8.615850e-47 |
| Msa0002930 | Msa1098560 | 0.813057 | 3.104010e-51 | -8.615850e-47 |
| Msa0002930 | Msa1113850 | 0.803535 | 3.328094e-49 | -8.615850e-47 |
| Msa0002930 | Msa1123880 | 0.813830 | 2.098310e-51 | -8.615850e-47 |
| Msa0002930 | Msa1127140 | 0.834866 | 2.339912e-56 | -8.615850e-47 |
| Msa0002930 | Msa1133000 | 0.823119 | 1.644069e-53 | -8.615850e-47 |
| Msa0002930 | Msa1134110 | 0.800332 | 1.514925e-48 | -8.615850e-47 |
| Msa0002930 | Msa1139810 | 0.841994 | 3.390129e-58 | -8.615850e-47 |
| Msa0002930 | Msa1145020 | 0.839820 | 1.260561e-57 | -8.615850e-47 |
| Msa0002930 | Msa1160400 | 0.801073 | 1.069188e-48 | -8.615850e-47 |
| Msa0002930 | Msa1166400 | 0.826912 | 2.090565e-54 | -8.615850e-47 |
| Msa0002930 | Msa1169990 | 0.814649 | 1.383617e-51 | -8.615850e-47 |
| Msa0002930 | Msa1176160 | 0.808451 | 3.076606e-50 | -8.615850e-47 |
| Msa0002930 | Msa1179280 | 0.816231 | 6.151492e-52 | -8.615850e-47 |
| Msa0002930 | Msa1182260 | 0.804558 | 2.039519e-49 | -8.615850e-47 |
| Msa0002930 | Msa1190400 | 0.804590 | 2.007732e-49 | -8.615850e-47 |
| Msa0002930 | Msa1196080 | 0.807890 | 4.051986e-50 | -8.615850e-47 |
| Msa0002930 | Msa1200440 | 0.816291 | 5.965963e-52 | -8.615850e-47 |
| Msa0002930 | Msa1201110 | 0.819490 | 1.130089e-52 | -8.615850e-47 |
| Msa0002930 | Msa1201160 | 0.821838 | 3.263017e-53 | -8.615850e-47 |
| Msa0002930 | Msa1222970 | 0.816837 | 4.501182e-52 | -8.615850e-47 |
| Msa0002930 | Msa1228190 | 0.846251 | 2.441856e-59 | -8.615850e-47 |
| Msa0002930 | Msa1228210 | 0.802628 | 5.125810e-49 | -8.615850e-47 |
| Msa0002930 | Msa1228610 | 0.822476 | 2.321242e-53 | -8.615850e-47 |
| Msa0002930 | Msa1233560 | 0.808553 | 2.927374e-50 | -8.615850e-47 |
| Msa0002930 | Msa1248040 | 0.817088 | 3.952606e-52 | -8.615850e-47 |
| Msa0002930 | Msa1264020 | 0.819352 | 1.214898e-52 | -8.615850e-47 |
| Msa0002930 | Msa1271260 | 0.839069 | 1.975446e-57 | -8.615850e-47 |
| Msa0002930 | Msa1271280 | 0.804675 | 1.927858e-49 | -8.615850e-47 |
| Msa0002930 | Msa1293770 | 0.807598 | 4.675018e-50 | -8.615850e-47 |
| Msa0002930 | Msa1294290 | 0.816983 | 4.172710e-52 | -8.615850e-47 |
| Msa0002930 | Msa1300490 | 0.810899 | 9.161163e-51 | -8.615850e-47 |
| Msa0002930 | Msa1305510 | 0.847559 | 1.071042e-59 | -8.615850e-47 |
| Msa0002930 | Msa1308380 | 0.811907 | 5.535482e-51 | -8.615850e-47 |
| Msa0002930 | Msa1316540 | 0.834830 | 2.388533e-56 | -8.615850e-47 |
| Msa0002930 | Msa1355400 | 0.802461 | 5.549113e-49 | -8.615850e-47 |
| Msa0002930 | Msa1367080 | 0.805664 | 1.196573e-49 | -8.615850e-47 |
| Msa0002930 | Msa1374550 | 0.825752 | 3.948359e-54 | -8.615850e-47 |
| Msa0002930 | Msa1379970 | 0.825480 | 4.580851e-54 | -8.615850e-47 |
| Msa0002930 | Msa1379990 | 0.813791 | 2.139939e-51 | -8.615850e-47 |
| Msa0002930 | Msa1389050 | 0.803213 | 3.880064e-49 | -8.615850e-47 |
| Msa0002930 | Msa1411070 | 0.840531 | 8.222878e-58 | -8.615850e-47 |
| Msa0002930 | Msa1420060 | 0.848783 | 4.918509e-60 | -8.615850e-47 |
| Msa0002930 | Msa1421550 | 0.821703 | 3.506657e-53 | -8.615850e-47 |
| Msa0002930 | Msa1423990 | 0.809426 | 1.903330e-50 | -8.615850e-47 |
| Msa0002930 | Msa1424690 | 0.821554 | 3.795562e-53 | -8.615850e-47 |
| Msa0002930 | Msa1427760 | 0.800621 | 1.322787e-48 | -8.615850e-47 |
| Msa0002930 | Msa1431850 | 0.808174 | 3.526392e-50 | -8.615850e-47 |
| Msa0002930 | Msa1435480 | 0.800703 | 1.272348e-48 | -8.615850e-47 |
| Msa0002930 | Msa1455590 | 0.829853 | 4.079912e-55 | -8.615850e-47 |
| Msa0002930 | Msa1460240 | 0.825494 | 4.546471e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0002930 | MtrunA17_Chr1g0162931 | 95.814 | 215 | 7 | 2 | 1 | 214 | 69 | 282 | 2.45e-150 | 419 |
| Msa0002930 | MtrunA17_Chr1g0210911 | 36.090 | 266 | 111 | 13 | 1 | 214 | 73 | 331 | 5.76e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 54 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCAAAACATAACTAATT+TGG | 0.207226 | 1_1:+5262432 | Msa0002930:CDS |
| AACTAATTTGGACCTATCTT+TGG | 0.259886 | 1_1:+5262444 | Msa0002930:CDS |
| TACTAGAAATTTCATTAATT+AGG | 0.264996 | 1_1:-5262643 | None:intergenic |
| GGTCCAAATTAGTTATGTTT+TGG | 0.275086 | 1_1:-5262435 | None:intergenic |
| TTATGATTATGTGCAGGATA+TGG | 0.280756 | 1_1:+5260122 | Msa0002930:CDS |
| ACTTCTCTGAGGGGAAATAT+TGG | 0.286018 | 1_1:-5262347 | None:intergenic |
| CAGAAGATGAAGAAGATATA+AGG | 0.297613 | 1_1:+5262293 | Msa0002930:CDS |
| GAACAAATCAGTTTCTTGTT+TGG | 0.311474 | 1_1:-5260241 | None:intergenic |
| TGGATGCATGTTTGGCCATT+TGG | 0.332767 | 1_1:+5262519 | Msa0002930:three_prime_UTR |
| AACAAATCAGTTTCTTGTTT+GGG | 0.342359 | 1_1:-5260240 | None:intergenic |
| CTGAAATTTGATGTCTGCTT+AGG | 0.354478 | 1_1:+5262604 | Msa0002930:three_prime_UTR |
| CTTCTCTGAGGGGAAATATT+GGG | 0.366143 | 1_1:-5262346 | None:intergenic |
| ACAGAAATTTCTCCCCAAAA+AGG | 0.367281 | 1_1:+5259419 | Msa0002930:CDS |
| TACACATATGGATGCATGTT+TGG | 0.390376 | 1_1:+5262511 | Msa0002930:three_prime_UTR |
| ATATTCTTTCTCTGCATTCA+AGG | 0.392029 | 1_1:-5260068 | None:intergenic |
| GCAACAGCAGAAGGGAATAA+AGG | 0.396273 | 1_1:+5260149 | Msa0002930:CDS |
| TTTGTTGTGTTGGTTCAATA+TGG | 0.396998 | 1_1:+5260175 | Msa0002930:CDS |
| GAATATTATTGATACACATA+TGG | 0.403216 | 1_1:+5262499 | Msa0002930:three_prime_UTR |
| TTTGTTTAAACCAGATGTAT+AGG | 0.415716 | 1_1:+5258803 | None:intergenic |
| TTTGGAGATCATGAATCTCT+TGG | 0.420210 | 1_1:+5259370 | Msa0002930:CDS |
| AGAAGATGAAGAAGATATAA+GGG | 0.421154 | 1_1:+5262294 | Msa0002930:CDS |
| CTCTGGATTTAGCAACTACA+TGG | 0.429164 | 1_1:+5262399 | Msa0002930:CDS |
| ACAAGAAACTGATTTGTTCC+AGG | 0.436372 | 1_1:+5260245 | Msa0002930:CDS |
| ACCTCTTGGAACAAAACATA+TGG | 0.449267 | 1_1:+5262573 | Msa0002930:three_prime_UTR |
| TTTCAGGAGCATGATGATGA+TGG | 0.456164 | 1_1:+5259346 | Msa0002930:CDS |
| GAGCATGATGATGATGGGTT+TGG | 0.465401 | 1_1:+5259352 | Msa0002930:CDS |
| GGAAAGATTGTGAAATATTG+AGG | 0.465565 | 1_1:-5260210 | None:intergenic |
| GCCAATGTTATGAGAAACTC+TGG | 0.469228 | 1_1:+5262382 | Msa0002930:CDS |
| ATGTCTGCTTAGGGAACAAA+AGG | 0.470308 | 1_1:+5262614 | Msa0002930:three_prime_UTR |
| TTAGTACTATTATTCTAGAA+AGG | 0.474883 | 1_1:+5262544 | Msa0002930:three_prime_UTR |
| TGAAATTTGATGTCTGCTTA+GGG | 0.479095 | 1_1:+5262605 | Msa0002930:three_prime_UTR |
| GAGAAGAGAAATTCCCTCTC+AGG | 0.479292 | 1_1:+5260042 | Msa0002930:CDS |
| ACGTTCAAATGGCCAAAGAT+AGG | 0.495295 | 1_1:-5262456 | None:intergenic |
| GTTTCTTGTTTGGGTAGCAC+AGG | 0.498612 | 1_1:-5260231 | None:intergenic |
| ATATAGTTATAACGTTCAAA+TGG | 0.503676 | 1_1:-5262467 | None:intergenic |
| ATAAAGGAGATTTGTTGTGT+TGG | 0.503985 | 1_1:+5260165 | Msa0002930:CDS |
| ATTGTGAAATATTGAGGTTG+AGG | 0.511226 | 1_1:-5260204 | None:intergenic |
| TTCAGGAGCATGATGATGAT+GGG | 0.513075 | 1_1:+5259347 | Msa0002930:CDS |
| ATAATAGTACTAAGTCCAAA+TGG | 0.515589 | 1_1:-5262534 | None:intergenic |
| TATGGTTCAGCAACAGCAGA+AGG | 0.539345 | 1_1:+5260140 | Msa0002930:CDS |
| TCCAGAGTTTCTCATAACAT+TGG | 0.548360 | 1_1:-5262383 | None:intergenic |
| TAGAAAGGTACTATACCTCT+TGG | 0.550901 | 1_1:+5262559 | Msa0002930:three_prime_UTR |
| AAGAAGCATTACTTCTCTGA+GGG | 0.576698 | 1_1:-5262357 | None:intergenic |
| AGATCATGAATCTCTTGGAA+TGG | 0.576715 | 1_1:+5259375 | Msa0002930:CDS |
| GCATTCAAGGATTCCTGAGA+GGG | 0.578921 | 1_1:-5260055 | None:intergenic |
| GAAGATGAAGAAGATATAAG+GGG | 0.601789 | 1_1:+5262295 | Msa0002930:CDS |
| GGTGGTGACTCATGCAAACA+AGG | 0.606199 | 1_1:+5258835 | Msa0002930:CDS |
| CAGATGTATAGGAGTATGAG+AGG | 0.628713 | 1_1:+5258814 | None:intergenic |
| GAAGAAGCATTACTTCTCTG+AGG | 0.630731 | 1_1:-5262358 | None:intergenic |
| TGCATTCAAGGATTCCTGAG+AGG | 0.645375 | 1_1:-5260056 | None:intergenic |
| TCTGGATTTAGCAACTACAT+GGG | 0.650318 | 1_1:+5262400 | Msa0002930:CDS |
| ATGGTTCAGCAACAGCAGAA+GGG | 0.659516 | 1_1:+5260141 | Msa0002930:CDS |
| ATGTATAGGAGTATGAGAGG+TGG | 0.663257 | 1_1:+5258817 | Msa0002930:CDS |
| AGAAGCATTACTTCTCTGAG+GGG | 0.734541 | 1_1:-5262356 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGATTATATAGTATAT+CGG | + | chr1_1:5259606-5259625 | Msa0002930:intron | 10.0% |
| !!! | ATTTTCTACAATATTAAAAA+TGG | - | chr1_1:5259737-5259756 | None:intergenic | 10.0% |
| !!! | ATTATTTTTATACCATAAAA+TGG | - | chr1_1:5259974-5259993 | None:intergenic | 10.0% |
| !! | ATAATAATTTCATTAACATT+TGG | + | chr1_1:5259989-5260008 | Msa0002930:intron | 10.0% |
| !!! | AAAAGATTGTTTTTTATGTA+CGG | - | chr1_1:5259329-5259348 | None:intergenic | 15.0% |
| !!! | AATAATTTCAAACTTTTCAA+AGG | + | chr1_1:5259470-5259489 | Msa0002930:intron | 15.0% |
| !!! | CATTTTTTTTTAAGAAAAAG+TGG | + | chr1_1:5259900-5259919 | Msa0002930:intron | 15.0% |
| !! | ATAAAATGGAAAAGTAAAAA+TGG | - | chr1_1:5259960-5259979 | None:intergenic | 15.0% |
| !!! | ATTTTTACTTTTCCATTTTA+TGG | + | chr1_1:5259959-5259978 | Msa0002930:intron | 15.0% |
| !! | AAAATCAATCATATCTTAAT+TGG | - | chr1_1:5260394-5260413 | None:intergenic | 15.0% |
| !!! | TGACTTTAAAAATAGTTTTT+AGG | + | chr1_1:5260519-5260538 | Msa0002930:intron | 15.0% |
| !!! | AAGTCTCAATTTTAATAATT+TGG | - | chr1_1:5261094-5261113 | None:intergenic | 15.0% |
| !!! | TTCAATTTCAATATTTTAGA+AGG | - | chr1_1:5261133-5261152 | None:intergenic | 15.0% |
| !! | AAAACATTGTTAATGCTATT+TGG | + | chr1_1:5259237-5259256 | Msa0002930:intron | 20.0% |
| !! | ACATATTAAGGAAATTAGAT+TGG | - | chr1_1:5259275-5259294 | None:intergenic | 20.0% |
| !! | ATATAAACCAACACATATTA+AGG | - | chr1_1:5259287-5259306 | None:intergenic | 20.0% |
| !!! | ACATAAAAAACAATCTTTTC+AGG | + | chr1_1:5259330-5259349 | Msa0002930:CDS | 20.0% |
| !! | TAAAGAAGAAAATAAAGCTA+TGG | - | chr1_1:5259448-5259467 | None:intergenic | 20.0% |
| !! | TTATAACATGTTCACTATTA+CGG | + | chr1_1:5259756-5259775 | Msa0002930:intron | 20.0% |
| !! | GAATTTATTGAAAATCTTGA+TGG | + | chr1_1:5259860-5259879 | Msa0002930:intron | 20.0% |
| !!! | TTTTTTTAAGAAAAAGTGGT+TGG | + | chr1_1:5259904-5259923 | Msa0002930:intron | 20.0% |
| !! | TAAAAAGTAGTGTATGTATT+TGG | - | chr1_1:5260105-5260124 | None:intergenic | 20.0% |
| !!! | ATTACTTTACTACTTCTTTT+TGG | + | chr1_1:5260319-5260338 | Msa0002930:intron | 20.0% |
| !!! | TTACTTTACTACTTCTTTTT+GGG | + | chr1_1:5260320-5260339 | Msa0002930:intron | 20.0% |
| !! | TAACCAAAGTTATATATGTT+TGG | - | chr1_1:5260424-5260443 | None:intergenic | 20.0% |
| !!! | ACACAAAATAAAAAAGCATA+GGG | - | chr1_1:5260813-5260832 | None:intergenic | 20.0% |
| !!! | TACACAAAATAAAAAAGCAT+AGG | - | chr1_1:5260814-5260833 | None:intergenic | 20.0% |
| !! | AAAATTATATCCACTTTGAA+AGG | - | chr1_1:5260911-5260930 | None:intergenic | 20.0% |
| !!! | TCAAAGTGGATATAATTTTT+TGG | + | chr1_1:5260912-5260931 | Msa0002930:intron | 20.0% |
| !!! | CAAAGTGGATATAATTTTTT+GGG | + | chr1_1:5260913-5260932 | Msa0002930:intron | 20.0% |
| !!! | AAAGTGGATATAATTTTTTG+GGG | + | chr1_1:5260914-5260933 | Msa0002930:intron | 20.0% |
| !!! | CTCAATTTTAATAATTTGGT+AGG | - | chr1_1:5261090-5261109 | None:intergenic | 20.0% |
| !! | AATCATATTTGATACGTTAT+TGG | - | chr1_1:5261681-5261700 | None:intergenic | 20.0% |
| !!! | TGGTACTTTTTTATTAGTTA+GGG | - | chr1_1:5261768-5261787 | None:intergenic | 20.0% |
| !!! | TTGGTACTTTTTTATTAGTT+AGG | - | chr1_1:5261769-5261788 | None:intergenic | 20.0% |
| !! | TATTTCATGATATTTGGATT+TGG | - | chr1_1:5261788-5261807 | None:intergenic | 20.0% |
| !!! | CCTTGAACATATATTTTTAT+TGG | - | chr1_1:5261815-5261834 | None:intergenic | 20.0% |
| !! | CCAATAAAAATATATGTTCA+AGG | + | chr1_1:5261812-5261831 | Msa0002930:intron | 20.0% |
| !!! | GACATGTATATTTTGAAAAA+AGG | - | chr1_1:5262173-5262192 | None:intergenic | 20.0% |
| !!! | ATGCTTTTTTTCATTTAACT+TGG | - | chr1_1:5262239-5262258 | None:intergenic | 20.0% |
| !! | ATATAGTTATAACGTTCAAA+TGG | - | chr1_1:5262470-5262489 | None:intergenic | 20.0% |
| !! | GAATATTATTGATACACATA+TGG | + | chr1_1:5262499-5262518 | Msa0002930:three_prime_UTR | 20.0% |
| !!! | TTAGTACTATTATTCTAGAA+AGG | + | chr1_1:5262544-5262563 | Msa0002930:three_prime_UTR | 20.0% |
| ! | CTAATTTCCTTAATATGTGT+TGG | + | chr1_1:5259277-5259296 | Msa0002930:intron | 25.0% |
| ! | TTGGTTTATATTTGACAGAT+AGG | + | chr1_1:5259296-5259315 | Msa0002930:intron | 25.0% |
| !!! | TACTTTTTATGATTATGTGC+AGG | + | chr1_1:5260116-5260135 | Msa0002930:CDS | 25.0% |
| !! | AACAAATCAGTTTCTTGTTT+GGG | - | chr1_1:5260243-5260262 | None:intergenic | 25.0% |
| ! | TAAAGTAATAATAGTAGCAC+AGG | - | chr1_1:5260308-5260327 | None:intergenic | 25.0% |
| ! | AGTCCAAACATATATAACTT+TGG | + | chr1_1:5260418-5260437 | Msa0002930:intron | 25.0% |
| ! | ATAATCTCATTCAAAGATTG+TGG | + | chr1_1:5260746-5260765 | Msa0002930:intron | 25.0% |
| ! | TAATCTCATTCAAAGATTGT+GGG | + | chr1_1:5260747-5260766 | Msa0002930:intron | 25.0% |
| ! | TAACATTGTGACAATGAAAT+GGG | - | chr1_1:5260842-5260861 | None:intergenic | 25.0% |
| !! | GTCACAATGTTACTTAATTA+AGG | + | chr1_1:5260850-5260869 | Msa0002930:intron | 25.0% |
| !! | ATGTGAATAGAGTTGTTATT+AGG | + | chr1_1:5260980-5260999 | Msa0002930:intron | 25.0% |
| !! | TGTGAATAGAGTTGTTATTA+GGG | + | chr1_1:5260981-5261000 | Msa0002930:intron | 25.0% |
| ! | ATTGAAATTGAGAGTTTATG+TGG | + | chr1_1:5261168-5261187 | Msa0002930:intron | 25.0% |
| ! | TTTGACATAAATGCAACAAA+AGG | - | chr1_1:5261221-5261240 | None:intergenic | 25.0% |
| !!! | CTAAAGTCTTATTAGTGAAA+AGG | - | chr1_1:5261248-5261267 | None:intergenic | 25.0% |
| ! | CTACCTTAACTAAAATGAAA+AGG | + | chr1_1:5261270-5261289 | Msa0002930:intron | 25.0% |
| !!! | TGTCCTTTTCATTTTAGTTA+AGG | - | chr1_1:5261276-5261295 | None:intergenic | 25.0% |
| ! | ATATGAGAAATTCTCTTCTT+CGG | + | chr1_1:5261479-5261498 | Msa0002930:intron | 25.0% |
| ! | TGTCTGATAGTTTAACAAAT+AGG | + | chr1_1:5261619-5261638 | Msa0002930:intron | 25.0% |
| !! | TTTTTATTAGTTAGGGAAAG+AGG | - | chr1_1:5261761-5261780 | None:intergenic | 25.0% |
| ! | GGTGAATATTTCATGATATT+TGG | - | chr1_1:5261794-5261813 | None:intergenic | 25.0% |
| ! | TATGCAAAACTACTCTTATT+TGG | - | chr1_1:5261933-5261952 | None:intergenic | 25.0% |
| !!! | CTTTTTTAACATCTTTTTGC+AGG | + | chr1_1:5262210-5262229 | Msa0002930:intron | 25.0% |
| !! | AAAAAGCATGTGAATGAAAT+TGG | + | chr1_1:5262250-5262269 | Msa0002930:CDS | 25.0% |
| ! | AGAAGATGAAGAAGATATAA+GGG | + | chr1_1:5262294-5262313 | Msa0002930:CDS | 25.0% |
| ! | TGTCCAAAACATAACTAATT+TGG | + | chr1_1:5262432-5262451 | Msa0002930:CDS | 25.0% |
| ! | ATAATAGTACTAAGTCCAAA+TGG | - | chr1_1:5262537-5262556 | None:intergenic | 25.0% |
| ! | ATTTCCTTACATGACTTTTG+TGG | + | chr1_1:5259009-5259028 | Msa0002930:intron | 30.0% |
| TTAACCACAAAAGTCATGTA+AGG | - | chr1_1:5259016-5259035 | None:intergenic | 30.0% | |
| ! | AGATTTTCCAAATTTGTGCA+TGG | - | chr1_1:5259063-5259082 | None:intergenic | 30.0% |
| ! | CTTTTCAAAGGACTTAAAAG+TGG | + | chr1_1:5259482-5259501 | Msa0002930:intron | 30.0% |
| GAAAACTACATTAGTGATTG+CGG | - | chr1_1:5259696-5259715 | None:intergenic | 30.0% | |
| ! | TTGGACTTTTGCTTGATATT+AGG | + | chr1_1:5259923-5259942 | Msa0002930:intron | 30.0% |
| ATATTCTTTCTCTGCATTCA+AGG | - | chr1_1:5260071-5260090 | None:intergenic | 30.0% | |
| TTATGATTATGTGCAGGATA+TGG | + | chr1_1:5260122-5260141 | Msa0002930:CDS | 30.0% | |
| !! | ATAAAGGAGATTTGTTGTGT+TGG | + | chr1_1:5260165-5260184 | Msa0002930:CDS | 30.0% |
| !! | TTTGTTGTGTTGGTTCAATA+TGG | + | chr1_1:5260175-5260194 | Msa0002930:CDS | 30.0% |
| ATTGTGAAATATTGAGGTTG+AGG | - | chr1_1:5260207-5260226 | None:intergenic | 30.0% | |
| GGAAAGATTGTGAAATATTG+AGG | - | chr1_1:5260213-5260232 | None:intergenic | 30.0% | |
| GAACAAATCAGTTTCTTGTT+TGG | - | chr1_1:5260244-5260263 | None:intergenic | 30.0% | |
| ! | TTTTGTATGGAATAAGTACC+TGG | - | chr1_1:5260266-5260285 | None:intergenic | 30.0% |
| !! | AAGCATGGATTGATTTTGTA+TGG | - | chr1_1:5260279-5260298 | None:intergenic | 30.0% |
| !!! | TTTACTACTTCTTTTTGGGT+AGG | + | chr1_1:5260324-5260343 | Msa0002930:intron | 30.0% |
| !!! | TTACTACTTCTTTTTGGGTA+GGG | + | chr1_1:5260325-5260344 | Msa0002930:intron | 30.0% |
| TAATTGGAAAATCTCCACTA+TGG | - | chr1_1:5260378-5260397 | None:intergenic | 30.0% | |
| AATCTCATTCAAAGATTGTG+GGG | + | chr1_1:5260748-5260767 | Msa0002930:intron | 30.0% | |
| GTAACATTGTGACAATGAAA+TGG | - | chr1_1:5260843-5260862 | None:intergenic | 30.0% | |
| ATCAAGAAAATCACCAACAA+GGG | - | chr1_1:5260942-5260961 | None:intergenic | 30.0% | |
| TATCAAGAAAATCACCAACA+AGG | - | chr1_1:5260943-5260962 | None:intergenic | 30.0% | |
| CTAATCATTTCTACATTCAG+TGG | + | chr1_1:5261063-5261082 | Msa0002930:intron | 30.0% | |
| GTAATGTCAGTGAATGAATA+AGG | - | chr1_1:5261507-5261526 | None:intergenic | 30.0% | |
| ATTATCTCAATACTCACTAG+AGG | + | chr1_1:5261698-5261717 | Msa0002930:intron | 30.0% | |
| TTATCTCAATACTCACTAGA+GGG | + | chr1_1:5261699-5261718 | Msa0002930:intron | 30.0% | |
| AAGGAAAAGTCATCATATGT+TGG | + | chr1_1:5261831-5261850 | Msa0002930:intron | 30.0% | |
| CAGAAGATGAAGAAGATATA+AGG | + | chr1_1:5262293-5262312 | Msa0002930:CDS | 30.0% | |
| GAAGATGAAGAAGATATAAG+GGG | + | chr1_1:5262295-5262314 | Msa0002930:CDS | 30.0% | |
| !! | ATTAGTTATGTTTTGGACAG+TGG | - | chr1_1:5262431-5262450 | None:intergenic | 30.0% |
| ! | GGTCCAAATTAGTTATGTTT+TGG | - | chr1_1:5262438-5262457 | None:intergenic | 30.0% |
| AACTAATTTGGACCTATCTT+TGG | + | chr1_1:5262444-5262463 | Msa0002930:CDS | 30.0% | |
| TGAAATTTGATGTCTGCTTA+GGG | + | chr1_1:5262605-5262624 | Msa0002930:three_prime_UTR | 30.0% | |
| CTAGTTTCCATGCACAAATT+TGG | + | chr1_1:5259053-5259072 | Msa0002930:intron | 35.0% | |
| TTTGGAGATCATGAATCTCT+TGG | + | chr1_1:5259370-5259389 | Msa0002930:CDS | 35.0% | |
| AGATCATGAATCTCTTGGAA+TGG | + | chr1_1:5259375-5259394 | Msa0002930:CDS | 35.0% | |
| ACAGAAATTTCTCCCCAAAA+AGG | + | chr1_1:5259419-5259438 | Msa0002930:CDS | 35.0% | |
| ! | AAAGCTATGGTGACCTTTTT+GGG | - | chr1_1:5259435-5259454 | None:intergenic | 35.0% |
| ! | TAAAGCTATGGTGACCTTTT+TGG | - | chr1_1:5259436-5259455 | None:intergenic | 35.0% |
| AGGACTTAAAAGTGGTATAG+TGG | + | chr1_1:5259490-5259509 | Msa0002930:intron | 35.0% | |
| GGACTTAAAAGTGGTATAGT+GGG | + | chr1_1:5259491-5259510 | Msa0002930:intron | 35.0% | |
| GACTTAAAAGTGGTATAGTG+GGG | + | chr1_1:5259492-5259511 | Msa0002930:intron | 35.0% | |
| ACACAATACAAGTACTACAC+CGG | - | chr1_1:5259535-5259554 | None:intergenic | 35.0% | |
| CTAATATGAGTAACTTCGTG+TGG | - | chr1_1:5259576-5259595 | None:intergenic | 35.0% | |
| TAACATGTTCACTATTACGG+TGG | + | chr1_1:5259759-5259778 | Msa0002930:intron | 35.0% | |
| TTTGATATCAGAGTGGTTCA+TGG | - | chr1_1:5259799-5259818 | None:intergenic | 35.0% | |
| GTGTATGTTTGATATCAGAG+TGG | - | chr1_1:5259806-5259825 | None:intergenic | 35.0% | |
| TGTTGTTATGACATTAGTCG+CGG | + | chr1_1:5259835-5259854 | Msa0002930:intron | 35.0% | |
| !! | ACAAGAAACTGATTTGTTCC+AGG | + | chr1_1:5260245-5260264 | Msa0002930:CDS | 35.0% |
| !! | GCTTTATTTCACTACCATAG+TGG | + | chr1_1:5260361-5260380 | Msa0002930:intron | 35.0% |
| ATCTCATTCAAAGATTGTGG+GGG | + | chr1_1:5260749-5260768 | Msa0002930:intron | 35.0% | |
| TTGTGACAATGAAATGGGAA+AGG | - | chr1_1:5260837-5260856 | None:intergenic | 35.0% | |
| GTAGATTTCACCTTTCAAAG+TGG | + | chr1_1:5260898-5260917 | Msa0002930:intron | 35.0% | |
| TCAAGAAAATCACCAACAAG+GGG | - | chr1_1:5260941-5260960 | None:intergenic | 35.0% | |
| ! | TTTTGTCACAATGCAACTCA+TGG | - | chr1_1:5261014-5261033 | None:intergenic | 35.0% |
| AGTTTATGTGGCATGTCTAA+TGG | + | chr1_1:5261180-5261199 | Msa0002930:intron | 35.0% | |
| GTCTAATGGAAAATTCAGAG+TGG | + | chr1_1:5261194-5261213 | Msa0002930:intron | 35.0% | |
| TTAATTGTCTTTCCCTTCCT+TGG | + | chr1_1:5261410-5261429 | Msa0002930:intron | 35.0% | |
| ! | TTTCTAAAGAGACCAAGGAA+GGG | - | chr1_1:5261425-5261444 | None:intergenic | 35.0% |
| ! | ATTTCTAAAGAGACCAAGGA+AGG | - | chr1_1:5261426-5261445 | None:intergenic | 35.0% |
| ! | GATGATTTCTAAAGAGACCA+AGG | - | chr1_1:5261430-5261449 | None:intergenic | 35.0% |
| TACAACGTAACGAATCGAAT+AGG | + | chr1_1:5261563-5261582 | Msa0002930:intron | 35.0% | |
| TAGAGGGAACTTATGAGAAA+AGG | + | chr1_1:5261715-5261734 | Msa0002930:intron | 35.0% | |
| !! | TAGTCTTATTTGAGACAGAG+AGG | - | chr1_1:5261895-5261914 | None:intergenic | 35.0% |
| !! | AAGAAGCATTACTTCTCTGA+GGG | - | chr1_1:5262360-5262379 | None:intergenic | 35.0% |
| TCCAGAGTTTCTCATAACAT+TGG | - | chr1_1:5262386-5262405 | None:intergenic | 35.0% | |
| TCTGGATTTAGCAACTACAT+GGG | + | chr1_1:5262400-5262419 | Msa0002930:CDS | 35.0% | |
| TACACATATGGATGCATGTT+TGG | + | chr1_1:5262511-5262530 | Msa0002930:three_prime_UTR | 35.0% | |
| !! | TAGAAAGGTACTATACCTCT+TGG | + | chr1_1:5262559-5262578 | Msa0002930:three_prime_UTR | 35.0% |
| ACCTCTTGGAACAAAACATA+TGG | + | chr1_1:5262573-5262592 | Msa0002930:three_prime_UTR | 35.0% | |
| !! | ACCATATGTTTTGTTCCAAG+AGG | - | chr1_1:5262577-5262596 | None:intergenic | 35.0% |
| CTGAAATTTGATGTCTGCTT+AGG | + | chr1_1:5262604-5262623 | Msa0002930:three_prime_UTR | 35.0% | |
| ! | ATGTATAGGAGTATGAGAGG+TGG | + | chr1_1:5258817-5258836 | Msa0002930:CDS | 40.0% |
| ! | GTGCATGGAAACTAGCTTAT+AGG | - | chr1_1:5259048-5259067 | None:intergenic | 40.0% |
| ! | TTTCAGGAGCATGATGATGA+TGG | + | chr1_1:5259346-5259365 | Msa0002930:CDS | 40.0% |
| ! | TTCAGGAGCATGATGATGAT+GGG | + | chr1_1:5259347-5259366 | Msa0002930:CDS | 40.0% |
| ! | AAGCTATGGTGACCTTTTTG+GGG | - | chr1_1:5259434-5259453 | None:intergenic | 40.0% |
| CACAATACAAGTACTACACC+GGG | - | chr1_1:5259534-5259553 | None:intergenic | 40.0% | |
| !!! | TTCTTTTTGGGTAGGGTGTT+AGG | + | chr1_1:5260332-5260351 | Msa0002930:intron | 40.0% |
| AACTGAGGTCTGAATGATGA+TGG | - | chr1_1:5260785-5260804 | None:intergenic | 40.0% | |
| ACTGACATTACAACGTCGAT+TGG | + | chr1_1:5261516-5261535 | Msa0002930:intron | 40.0% | |
| ! | CTGACATTACAACGTCGATT+GGG | + | chr1_1:5261517-5261536 | Msa0002930:intron | 40.0% |
| ! | CTTCTCTGAGGGGAAATATT+GGG | - | chr1_1:5262349-5262368 | None:intergenic | 40.0% |
| ! | ACTTCTCTGAGGGGAAATAT+TGG | - | chr1_1:5262350-5262369 | None:intergenic | 40.0% |
| !! | AGAAGCATTACTTCTCTGAG+GGG | - | chr1_1:5262359-5262378 | None:intergenic | 40.0% |
| !! | GAAGAAGCATTACTTCTCTG+AGG | - | chr1_1:5262361-5262380 | None:intergenic | 40.0% |
| GCCAATGTTATGAGAAACTC+TGG | + | chr1_1:5262382-5262401 | Msa0002930:CDS | 40.0% | |
| CTCTGGATTTAGCAACTACA+TGG | + | chr1_1:5262399-5262418 | Msa0002930:CDS | 40.0% | |
| ACGTTCAAATGGCCAAAGAT+AGG | - | chr1_1:5262459-5262478 | None:intergenic | 40.0% | |
| ATGTCTGCTTAGGGAACAAA+AGG | + | chr1_1:5262614-5262633 | Msa0002930:three_prime_UTR | 40.0% | |
| !! | GAGCATGATGATGATGGGTT+TGG | + | chr1_1:5259352-5259371 | Msa0002930:CDS | 45.0% |
| ! | AAAAGTGGTATAGTGGGGCA+TGG | + | chr1_1:5259497-5259516 | Msa0002930:intron | 45.0% |
| ! | GGCATGGTTTAAAATCGTCC+CGG | + | chr1_1:5259513-5259532 | Msa0002930:intron | 45.0% |
| GAGAAGAGAAATTCCCTCTC+AGG | + | chr1_1:5260042-5260061 | Msa0002930:CDS | 45.0% | |
| GCATTCAAGGATTCCTGAGA+GGG | - | chr1_1:5260058-5260077 | None:intergenic | 45.0% | |
| TGCATTCAAGGATTCCTGAG+AGG | - | chr1_1:5260059-5260078 | None:intergenic | 45.0% | |
| TATGGTTCAGCAACAGCAGA+AGG | + | chr1_1:5260140-5260159 | Msa0002930:CDS | 45.0% | |
| ATGGTTCAGCAACAGCAGAA+GGG | + | chr1_1:5260141-5260160 | Msa0002930:CDS | 45.0% | |
| GCAACAGCAGAAGGGAATAA+AGG | + | chr1_1:5260149-5260168 | Msa0002930:CDS | 45.0% | |
| ! | GTTTCTTGTTTGGGTAGCAC+AGG | - | chr1_1:5260234-5260253 | None:intergenic | 45.0% |
| TAGCACAGGACAAGAAAGCA+TGG | - | chr1_1:5260294-5260313 | None:intergenic | 45.0% | |
| ! | TTGGGTAGGGTGTTAGGTTA+TGG | + | chr1_1:5260338-5260357 | Msa0002930:intron | 45.0% |
| ! | TGGGTAGGGTGTTAGGTTAT+GGG | + | chr1_1:5260339-5260358 | Msa0002930:intron | 45.0% |
| TCACTGAAGTCTAACGCAAG+TGG | - | chr1_1:5260616-5260635 | None:intergenic | 45.0% | |
| ! | AAGCATAGGGCATCAAACTG+AGG | - | chr1_1:5260800-5260819 | None:intergenic | 45.0% |
| !!! | ATTTTTTGGGGTCCCCTTGT+TGG | + | chr1_1:5260926-5260945 | Msa0002930:intron | 45.0% |
| TGAGACTTTCTCACGTTCAG+TGG | + | chr1_1:5261106-5261125 | Msa0002930:intron | 45.0% | |
| ! | ACAACGTCGATTGGGTTTAG+TGG | + | chr1_1:5261525-5261544 | Msa0002930:intron | 45.0% |
| TGGATGCATGTTTGGCCATT+TGG | + | chr1_1:5262519-5262538 | Msa0002930:three_prime_UTR | 45.0% | |
| !! | TATATATAAAAAAAAGAATT+AGG | + | chr1_1:5260483-5260502 | Msa0002930:intron | 5.0% |
| !! | TTAAAATAATTGTTTAAATT+CGG | - | chr1_1:5262035-5262054 | None:intergenic | 5.0% |
| GGTGGTGACTCATGCAAACA+AGG | + | chr1_1:5258835-5258854 | Msa0002930:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 5258817 | 5262663 | 5258817 | ID=Msa0002930;Name=Msa0002930 |
| chr1_1 | mRNA | 5258817 | 5262663 | 5258817 | ID=Msa0002930-mRNA-1;Parent=Msa0002930;Name=Msa0002930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.75|1|1|1|4|189|214 |
| chr1_1 | exon | 5258817 | 5258856 | 5258817 | ID=Msa0002930-mRNA-1:exon:1568;Parent=Msa0002930-mRNA-1 |
| chr1_1 | exon | 5259314 | 5259440 | 5259314 | ID=Msa0002930-mRNA-1:exon:1569;Parent=Msa0002930-mRNA-1 |
| chr1_1 | exon | 5260032 | 5260266 | 5260032 | ID=Msa0002930-mRNA-1:exon:1570;Parent=Msa0002930-mRNA-1 |
| chr1_1 | exon | 5262232 | 5262663 | 5262232 | ID=Msa0002930-mRNA-1:exon:1571;Parent=Msa0002930-mRNA-1 |
| chr1_1 | CDS | 5258817 | 5258856 | 5258817 | ID=Msa0002930-mRNA-1:cds;Parent=Msa0002930-mRNA-1 |
| chr1_1 | CDS | 5259314 | 5259440 | 5259314 | ID=Msa0002930-mRNA-1:cds;Parent=Msa0002930-mRNA-1 |
| chr1_1 | CDS | 5260032 | 5260266 | 5260032 | ID=Msa0002930-mRNA-1:cds;Parent=Msa0002930-mRNA-1 |
| chr1_1 | CDS | 5262232 | 5262474 | 5262232 | ID=Msa0002930-mRNA-1:cds;Parent=Msa0002930-mRNA-1 |
| chr1_1 | three_prime_UTR | 5262475 | 5262663 | 5262475 | ID=Msa0002930-mRNA-1:three_prime_utr;Parent=Msa0002930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
