Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322830 | XP_013463540.1 | 89.048 | 210 | 13 | 1 | 1 | 200 | 1 | 210 | 1.97e-128 | 370 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322830 | sp|Q9ZRA4|AB19A_PRUPE | 68.269 | 208 | 55 | 2 | 3 | 199 | 1 | 208 | 7.25e-95 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0322830 | 0.863918 | 1.766718e-64 | -8.615850e-47 |
| Msa0003040 | Msa0322830 | 0.838264 | 3.189475e-57 | -8.615850e-47 |
| Msa0012440 | Msa0322830 | 0.823141 | 1.624758e-53 | -8.615850e-47 |
| Msa0016120 | Msa0322830 | 0.830791 | 2.406579e-55 | -8.615850e-47 |
| Msa0017510 | Msa0322830 | 0.807495 | 4.916218e-50 | -8.615850e-47 |
| Msa0022640 | Msa0322830 | 0.837810 | 4.173131e-57 | -8.615850e-47 |
| Msa0036430 | Msa0322830 | 0.851292 | 9.761636e-61 | -8.615850e-47 |
| Msa0050040 | Msa0322830 | 0.837226 | 5.889887e-57 | -8.615850e-47 |
| Msa0053110 | Msa0322830 | 0.806482 | 8.050369e-50 | -8.615850e-47 |
| Msa0057240 | Msa0322830 | 0.814876 | 1.232054e-51 | -8.615850e-47 |
| Msa0062440 | Msa0322830 | 0.804248 | 2.365887e-49 | -8.615850e-47 |
| Msa0084500 | Msa0322830 | 0.842869 | 1.986145e-58 | -8.615850e-47 |
| Msa0098440 | Msa0322830 | 0.811971 | 5.360304e-51 | -8.615850e-47 |
| Msa0102990 | Msa0322830 | 0.837158 | 6.128836e-57 | -8.615850e-47 |
| Msa0103000 | Msa0322830 | 0.800656 | 1.301314e-48 | -8.615850e-47 |
| Msa0106790 | Msa0322830 | 0.900944 | 4.410002e-78 | -8.615850e-47 |
| Msa0109880 | Msa0322830 | 0.813565 | 2.400759e-51 | -8.615850e-47 |
| Msa0118380 | Msa0322830 | 0.807073 | 6.039693e-50 | -8.615850e-47 |
| Msa0118400 | Msa0322830 | 0.866730 | 2.302931e-65 | -8.615850e-47 |
| Msa0130570 | Msa0322830 | 0.867229 | 1.595922e-65 | -8.615850e-47 |
| Msa0134040 | Msa0322830 | 0.817173 | 3.783091e-52 | -8.615850e-47 |
| Msa0141600 | Msa0322830 | 0.816633 | 5.001070e-52 | -8.615850e-47 |
| Msa0146920 | Msa0322830 | 0.833874 | 4.150777e-56 | -8.615850e-47 |
| Msa0147560 | Msa0322830 | 0.814003 | 1.922187e-51 | -8.615850e-47 |
| Msa0149140 | Msa0322830 | 0.833521 | 5.083356e-56 | -8.615850e-47 |
| Msa0149560 | Msa0322830 | 0.818339 | 2.064031e-52 | -8.615850e-47 |
| Msa0152480 | Msa0322830 | 0.825109 | 5.608294e-54 | -8.615850e-47 |
| Msa0152500 | Msa0322830 | 0.800715 | 1.265264e-48 | -8.615850e-47 |
| Msa0153420 | Msa0322830 | 0.857716 | 1.350823e-62 | -8.615850e-47 |
| Msa0157290 | Msa0322830 | 0.807531 | 4.829465e-50 | -8.615850e-47 |
| Msa0161680 | Msa0322830 | 0.841954 | 3.474170e-58 | -8.615850e-47 |
| Msa0176470 | Msa0322830 | 0.852819 | 3.593661e-61 | -8.615850e-47 |
| Msa0194380 | Msa0322830 | 0.838458 | 2.841618e-57 | -8.615850e-47 |
| Msa0200030 | Msa0322830 | 0.814891 | 1.222704e-51 | -8.615850e-47 |
| Msa0203010 | Msa0322830 | 0.822053 | 2.909444e-53 | -8.615850e-47 |
| Msa0203020 | Msa0322830 | 0.809014 | 2.332869e-50 | -8.615850e-47 |
| Msa0203030 | Msa0322830 | 0.894594 | 2.129433e-75 | -8.615850e-47 |
| Msa0212150 | Msa0322830 | 0.809960 | 1.461300e-50 | -8.615850e-47 |
| Msa0219190 | Msa0322830 | 0.846537 | 2.041562e-59 | -8.615850e-47 |
| Msa0219310 | Msa0322830 | 0.810620 | 1.052878e-50 | -8.615850e-47 |
| Msa0220420 | Msa0322830 | 0.804734 | 1.874098e-49 | -8.615850e-47 |
| Msa0236110 | Msa0322830 | 0.868483 | 6.314769e-66 | -8.615850e-47 |
| Msa0242270 | Msa0322830 | 0.804246 | 2.368212e-49 | -8.615850e-47 |
| Msa0251240 | Msa0322830 | 0.813937 | 1.987967e-51 | -8.615850e-47 |
| Msa0252770 | Msa0322830 | 0.812023 | 5.221831e-51 | -8.615850e-47 |
| Msa0260970 | Msa0322830 | 0.801621 | 8.258084e-49 | -8.615850e-47 |
| Msa0262560 | Msa0322830 | 0.812314 | 4.511276e-51 | -8.615850e-47 |
| Msa0273990 | Msa0322830 | 0.846518 | 2.065942e-59 | -8.615850e-47 |
| Msa0280750 | Msa0322830 | 0.805644 | 1.208621e-49 | -8.615850e-47 |
| Msa0288200 | Msa0322830 | 0.829675 | 4.508449e-55 | -8.615850e-47 |
| Msa0298240 | Msa0322830 | 0.827270 | 1.716263e-54 | -8.615850e-47 |
| Msa0300620 | Msa0322830 | 0.818623 | 1.779370e-52 | -8.615850e-47 |
| Msa0306300 | Msa0322830 | 0.800202 | 1.609421e-48 | -8.615850e-47 |
| Msa0314630 | Msa0322830 | 0.865270 | 6.670616e-65 | -8.615850e-47 |
| Msa0322830 | Msa0322840 | 0.905717 | 3.195041e-80 | -8.615850e-47 |
| Msa0322830 | Msa0322860 | 0.946123 | 8.395310e-105 | -8.615850e-47 |
| Msa0322830 | Msa0326540 | 0.816032 | 6.815501e-52 | -8.615850e-47 |
| Msa0322830 | Msa0329620 | 0.826585 | 2.502886e-54 | -8.615850e-47 |
| Msa0322830 | Msa0331530 | 0.800727 | 1.258385e-48 | -8.615850e-47 |
| Msa0322830 | Msa0331540 | 0.800499 | 1.400766e-48 | -8.615850e-47 |
| Msa0322830 | Msa0337850 | 0.801817 | 7.530142e-49 | -8.615850e-47 |
| Msa0322830 | Msa0351770 | 0.824628 | 7.282147e-54 | -8.615850e-47 |
| Msa0322830 | Msa0359250 | 0.821596 | 3.711681e-53 | -8.615850e-47 |
| Msa0322830 | Msa0370600 | 0.804985 | 1.660516e-49 | -8.615850e-47 |
| Msa0322830 | Msa0373960 | 0.828688 | 7.822801e-55 | -8.615850e-47 |
| Msa0322830 | Msa0378500 | 0.825468 | 4.612385e-54 | -8.615850e-47 |
| Msa0322830 | Msa0406000 | 0.819489 | 1.130777e-52 | -8.615850e-47 |
| Msa0322830 | Msa0408630 | 0.815691 | 8.121593e-52 | -8.615850e-47 |
| Msa0322830 | Msa0413930 | 0.823892 | 1.084477e-53 | -8.615850e-47 |
| Msa0322830 | Msa0417440 | 0.814523 | 1.475094e-51 | -8.615850e-47 |
| Msa0322830 | Msa0418200 | 0.820731 | 5.873985e-53 | -8.615850e-47 |
| Msa0322830 | Msa0419820 | 0.806944 | 6.430868e-50 | -8.615850e-47 |
| Msa0322830 | Msa0423100 | 0.830258 | 3.250373e-55 | -8.615850e-47 |
| Msa0322830 | Msa0424330 | 0.802297 | 5.998254e-49 | -8.615850e-47 |
| Msa0322830 | Msa0424340 | 0.803412 | 3.529896e-49 | -8.615850e-47 |
| Msa0322830 | Msa0436460 | 0.811089 | 8.334836e-51 | -8.615850e-47 |
| Msa0322830 | Msa0436500 | 0.871994 | 4.470833e-67 | -8.615850e-47 |
| Msa0322830 | Msa0441590 | 0.809362 | 1.964148e-50 | -8.615850e-47 |
| Msa0322830 | Msa0444010 | 0.849251 | 3.644665e-60 | -8.615850e-47 |
| Msa0322830 | Msa0451400 | 0.819241 | 1.287846e-52 | -8.615850e-47 |
| Msa0322830 | Msa0458950 | 0.800379 | 1.481352e-48 | -8.615850e-47 |
| Msa0322830 | Msa0464540 | 0.827600 | 1.430643e-54 | -8.615850e-47 |
| Msa0322830 | Msa0469260 | 0.824457 | 7.989329e-54 | -8.615850e-47 |
| Msa0322830 | Msa0476590 | 0.803515 | 3.359857e-49 | -8.615850e-47 |
| Msa0322830 | Msa0492190 | 0.812143 | 4.917378e-51 | -8.615850e-47 |
| Msa0322830 | Msa0509790 | 0.817965 | 2.508505e-52 | -8.615850e-47 |
| Msa0322830 | Msa0515950 | 0.807203 | 5.667650e-50 | -8.615850e-47 |
| Msa0322830 | Msa0520510 | 0.821220 | 4.534197e-53 | -8.615850e-47 |
| Msa0322830 | Msa0533080 | 0.805794 | 1.123782e-49 | -8.615850e-47 |
| Msa0322830 | Msa0535040 | 0.830015 | 3.726187e-55 | -8.615850e-47 |
| Msa0322830 | Msa0537920 | 0.806295 | 8.815351e-50 | -8.615850e-47 |
| Msa0322830 | Msa0538220 | 0.821399 | 4.123026e-53 | -8.615850e-47 |
| Msa0322830 | Msa0575740 | 0.828483 | 8.769759e-55 | -8.615850e-47 |
| Msa0322830 | Msa0584130 | 0.825867 | 3.708912e-54 | -8.615850e-47 |
| Msa0322830 | Msa0591790 | 0.804151 | 2.478472e-49 | -8.615850e-47 |
| Msa0322830 | Msa0591800 | 0.830833 | 2.349800e-55 | -8.615850e-47 |
| Msa0322830 | Msa0625890 | 0.805624 | 1.220467e-49 | -8.615850e-47 |
| Msa0322830 | Msa0641250 | 0.803374 | 3.594901e-49 | -8.615850e-47 |
| Msa0322830 | Msa0663680 | 0.817588 | 3.050786e-52 | -8.615850e-47 |
| Msa0322830 | Msa0669840 | 0.839052 | 1.995404e-57 | -8.615850e-47 |
| Msa0322830 | Msa0682530 | 0.854500 | 1.181078e-61 | -8.615850e-47 |
| Msa0322830 | Msa0691160 | 0.819168 | 1.338338e-52 | -8.615850e-47 |
| Msa0322830 | Msa0707220 | 0.844093 | 9.355962e-59 | -8.615850e-47 |
| Msa0322830 | Msa0717670 | 0.803132 | 4.034044e-49 | -8.615850e-47 |
| Msa0322830 | Msa0739580 | 0.817073 | 3.983051e-52 | -8.615850e-47 |
| Msa0322830 | Msa0742180 | 0.825940 | 3.564512e-54 | -8.615850e-47 |
| Msa0322830 | Msa0747780 | 0.805415 | 1.349854e-49 | -8.615850e-47 |
| Msa0322830 | Msa0786040 | 0.809699 | 1.663327e-50 | -8.615850e-47 |
| Msa0322830 | Msa0823400 | 0.829171 | 5.975024e-55 | -8.615850e-47 |
| Msa0322830 | Msa0843640 | 0.835992 | 1.214681e-56 | -8.615850e-47 |
| Msa0322830 | Msa0860280 | 0.801190 | 1.012238e-48 | -8.615850e-47 |
| Msa0322830 | Msa0862100 | 0.807436 | 5.058946e-50 | -8.615850e-47 |
| Msa0322830 | Msa0862310 | 0.822129 | 2.794816e-53 | -8.615850e-47 |
| Msa0322830 | Msa0867350 | 0.829072 | 6.314574e-55 | -8.615850e-47 |
| Msa0322830 | Msa0870620 | 0.815022 | 1.143916e-51 | -8.615850e-47 |
| Msa0322830 | Msa0872310 | 0.804788 | 1.825771e-49 | -8.615850e-47 |
| Msa0322830 | Msa0873190 | 0.813473 | 2.515116e-51 | -8.615850e-47 |
| Msa0322830 | Msa0876670 | 0.804598 | 2.000617e-49 | -8.615850e-47 |
| Msa0322830 | Msa0880140 | 0.809632 | 1.719182e-50 | -8.615850e-47 |
| Msa0322830 | Msa0880710 | 0.810209 | 1.291503e-50 | -8.615850e-47 |
| Msa0322830 | Msa0885060 | 0.847462 | 1.139295e-59 | -8.615850e-47 |
| Msa0322830 | Msa0898730 | 0.828131 | 1.065821e-54 | -8.615850e-47 |
| Msa0322830 | Msa0899950 | 0.826555 | 2.543764e-54 | -8.615850e-47 |
| Msa0322830 | Msa0941960 | 0.805644 | 1.208173e-49 | -8.615850e-47 |
| Msa0322830 | Msa0946210 | 0.828800 | 7.351338e-55 | -8.615850e-47 |
| Msa0322830 | Msa0946320 | 0.805258 | 1.456174e-49 | -8.615850e-47 |
| Msa0322830 | Msa0961560 | 0.816236 | 6.135893e-52 | -8.615850e-47 |
| Msa0322830 | Msa0965310 | 0.823816 | 1.129651e-53 | -8.615850e-47 |
| Msa0322830 | Msa0975580 | 0.801393 | 9.198828e-49 | -8.615850e-47 |
| Msa0322830 | Msa0979510 | 0.859947 | 2.906000e-63 | -8.615850e-47 |
| Msa0322830 | Msa0996270 | 0.801889 | 7.276884e-49 | -8.615850e-47 |
| Msa0322830 | Msa0999340 | 0.867115 | 1.735914e-65 | -8.615850e-47 |
| Msa0322830 | Msa0999350 | 0.861262 | 1.160644e-63 | -8.615850e-47 |
| Msa0322830 | Msa0999360 | 0.859029 | 5.486869e-63 | -8.615850e-47 |
| Msa0322830 | Msa0999390 | 0.850088 | 2.128302e-60 | -8.615850e-47 |
| Msa0322830 | Msa0999400 | 0.858026 | 1.092322e-62 | -8.615850e-47 |
| Msa0322830 | Msa0999410 | 0.844012 | 9.838935e-59 | -8.615850e-47 |
| Msa0322830 | Msa0999700 | 0.806585 | 7.657302e-50 | -8.615850e-47 |
| Msa0322830 | Msa1010110 | 0.820425 | 6.906080e-53 | -8.615850e-47 |
| Msa0322830 | Msa1020720 | 0.810264 | 1.256914e-50 | -8.615850e-47 |
| Msa0322830 | Msa1033560 | 0.828776 | 7.449213e-55 | -8.615850e-47 |
| Msa0322830 | Msa1034680 | 0.811144 | 8.108570e-51 | -8.615850e-47 |
| Msa0322830 | Msa1041530 | 0.823907 | 1.075452e-53 | -8.615850e-47 |
| Msa0322830 | Msa1055280 | 0.804273 | 2.338390e-49 | -8.615850e-47 |
| Msa0322830 | Msa1055500 | 0.827328 | 1.662213e-54 | -8.615850e-47 |
| Msa0322830 | Msa1073340 | 0.831039 | 2.092007e-55 | -8.615850e-47 |
| Msa0322830 | Msa1081570 | 0.819132 | 1.363495e-52 | -8.615850e-47 |
| Msa0322830 | Msa1092020 | 0.820373 | 7.098671e-53 | -8.615850e-47 |
| Msa0322830 | Msa1097560 | 0.804729 | 1.878803e-49 | -8.615850e-47 |
| Msa0322830 | Msa1113850 | 0.842518 | 2.463229e-58 | -8.615850e-47 |
| Msa0322830 | Msa1127140 | 0.822656 | 2.108022e-53 | -8.615850e-47 |
| Msa0322830 | Msa1135380 | 0.813736 | 2.201297e-51 | -8.615850e-47 |
| Msa0322830 | Msa1139410 | 0.802789 | 4.748353e-49 | -8.615850e-47 |
| Msa0322830 | Msa1139810 | 0.819768 | 9.767251e-53 | -8.615850e-47 |
| Msa0322830 | Msa1145020 | 0.852436 | 4.621501e-61 | -8.615850e-47 |
| Msa0322830 | Msa1160400 | 0.809737 | 1.632429e-50 | -8.615850e-47 |
| Msa0322830 | Msa1166400 | 0.807266 | 5.498245e-50 | -8.615850e-47 |
| Msa0322830 | Msa1169990 | 0.800662 | 1.297194e-48 | -8.615850e-47 |
| Msa0322830 | Msa1176160 | 0.801616 | 8.277881e-49 | -8.615850e-47 |
| Msa0322830 | Msa1179280 | 0.815865 | 7.426526e-52 | -8.615850e-47 |
| Msa0322830 | Msa1201110 | 0.830230 | 3.300689e-55 | -8.615850e-47 |
| Msa0322830 | Msa1201160 | 0.828134 | 1.064381e-54 | -8.615850e-47 |
| Msa0322830 | Msa1218480 | 0.816248 | 6.098786e-52 | -8.615850e-47 |
| Msa0322830 | Msa1227340 | 0.837569 | 4.811590e-57 | -8.615850e-47 |
| Msa0322830 | Msa1228190 | 0.840139 | 1.040948e-57 | -8.615850e-47 |
| Msa0322830 | Msa1228610 | 0.824029 | 1.007272e-53 | -8.615850e-47 |
| Msa0322830 | Msa1233560 | 0.813147 | 2.965630e-51 | -8.615850e-47 |
| Msa0322830 | Msa1234280 | 0.802448 | 5.583660e-49 | -8.615850e-47 |
| Msa0322830 | Msa1248040 | 0.804511 | 2.086121e-49 | -8.615850e-47 |
| Msa0322830 | Msa1271260 | 0.841894 | 3.603150e-58 | -8.615850e-47 |
| Msa0322830 | Msa1294290 | 0.829403 | 5.250268e-55 | -8.615850e-47 |
| Msa0322830 | Msa1305510 | 0.824304 | 8.679538e-54 | -8.615850e-47 |
| Msa0322830 | Msa1307190 | 0.802043 | 6.763822e-49 | -8.615850e-47 |
| Msa0322830 | Msa1313970 | 0.805130 | 1.549020e-49 | -8.615850e-47 |
| Msa0322830 | Msa1321000 | 0.810397 | 1.176253e-50 | -8.615850e-47 |
| Msa0322830 | Msa1339440 | 0.801756 | 7.750328e-49 | -8.615850e-47 |
| Msa0322830 | Msa1340390 | 0.807393 | 5.167070e-50 | -8.615850e-47 |
| Msa0322830 | Msa1345420 | 0.833080 | 6.547045e-56 | -8.615850e-47 |
| Msa0322830 | Msa1355400 | 0.815521 | 8.860495e-52 | -8.615850e-47 |
| Msa0322830 | Msa1378770 | 0.815565 | 8.663551e-52 | -8.615850e-47 |
| Msa0322830 | Msa1379970 | 0.837055 | 6.514782e-57 | -8.615850e-47 |
| Msa0322830 | Msa1379990 | 0.822774 | 1.978505e-53 | -8.615850e-47 |
| Msa0322830 | Msa1389050 | 0.817919 | 2.568186e-52 | -8.615850e-47 |
| Msa0322830 | Msa1406780 | 0.812386 | 4.352742e-51 | -8.615850e-47 |
| Msa0322830 | Msa1411070 | 0.804113 | 2.524113e-49 | -8.615850e-47 |
| Msa0322830 | Msa1420060 | 0.863615 | 2.194260e-64 | -8.615850e-47 |
| Msa0322830 | Msa1421550 | 0.835778 | 1.376701e-56 | -8.615850e-47 |
| Msa0322830 | Msa1423990 | 0.817722 | 2.844941e-52 | -8.615850e-47 |
| Msa0322830 | Msa1424690 | 0.854763 | 9.911881e-62 | -8.615850e-47 |
| Msa0322830 | Msa1429420 | 0.824209 | 9.136884e-54 | -8.615850e-47 |
| Msa0322830 | Msa1431850 | 0.820996 | 5.105858e-53 | -8.615850e-47 |
| Msa0322830 | Msa1435480 | 0.842886 | 1.966084e-58 | -8.615850e-47 |
| Msa0322830 | Msa1440340 | 0.811342 | 7.344006e-51 | -8.615850e-47 |
| Msa0322830 | Msa1442630 | 0.836962 | 6.878368e-57 | -8.615850e-47 |
| Msa0322830 | Msa1446520 | 0.831853 | 1.318763e-55 | -8.615850e-47 |
| Msa0322830 | Msa1455590 | 0.804546 | 2.051369e-49 | -8.615850e-47 |
| Msa0322830 | Msa1458910 | 0.807675 | 4.502235e-50 | -8.615850e-47 |
| Msa0322830 | Msa1462530 | 0.820902 | 5.366668e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322830 | MtrunA17_Chr2g0300591 | 89.048 | 210 | 13 | 1 | 1 | 200 | 1 | 210 | 1.81e-132 | 370 |
| Msa0322830 | MtrunA17_Chr2g0300581 | 89.524 | 210 | 12 | 1 | 1 | 200 | 1 | 210 | 2.21e-132 | 370 |
| Msa0322830 | MtrunA17_Chr2g0300561 | 80.476 | 210 | 31 | 1 | 1 | 200 | 1 | 210 | 6.41e-117 | 330 |
| Msa0322830 | MtrunA17_Chr8g0343911 | 59.135 | 208 | 75 | 1 | 3 | 200 | 1 | 208 | 1.35e-80 | 238 |
| Msa0322830 | MtrunA17_Chr8g0343934 | 51.675 | 209 | 87 | 4 | 4 | 200 | 3 | 209 | 2.76e-69 | 210 |
| Msa0322830 | MtrunA17_Chr8g0343954 | 52.850 | 193 | 79 | 3 | 18 | 200 | 19 | 209 | 3.08e-67 | 205 |
| Msa0322830 | MtrunA17_Chr8g0343961 | 50.239 | 209 | 90 | 4 | 4 | 200 | 3 | 209 | 1.20e-65 | 201 |
| Msa0322830 | MtrunA17_Chr2g0301611 | 46.698 | 212 | 98 | 5 | 1 | 200 | 1 | 209 | 5.32e-61 | 189 |
| Msa0322830 | MtrunA17_Chr8g0343921 | 47.596 | 208 | 93 | 3 | 7 | 200 | 2 | 207 | 7.73e-61 | 188 |
| Msa0322830 | MtrunA17_Chr2g0302171 | 47.368 | 209 | 96 | 4 | 4 | 200 | 3 | 209 | 1.04e-59 | 186 |
| Msa0322830 | MtrunA17_Chr2g0313961 | 47.573 | 206 | 95 | 4 | 4 | 199 | 6 | 208 | 1.83e-58 | 182 |
| Msa0322830 | MtrunA17_Chr3g0084531 | 46.890 | 209 | 97 | 4 | 4 | 200 | 3 | 209 | 6.54e-58 | 181 |
| Msa0322830 | MtrunA17_Chr2g0297241 | 47.115 | 208 | 96 | 4 | 4 | 199 | 3 | 208 | 3.90e-57 | 179 |
| Msa0322830 | MtrunA17_Chr2g0297231 | 46.117 | 206 | 97 | 4 | 4 | 197 | 3 | 206 | 9.37e-57 | 178 |
| Msa0322830 | MtrunA17_Chr3g0084511 | 46.154 | 208 | 99 | 4 | 4 | 200 | 3 | 208 | 1.72e-56 | 177 |
| Msa0322830 | MtrunA17_Chr3g0084521 | 46.154 | 208 | 99 | 4 | 4 | 200 | 3 | 208 | 5.63e-56 | 176 |
| Msa0322830 | MtrunA17_Chr4g0003361 | 44.928 | 207 | 103 | 3 | 3 | 200 | 1 | 205 | 7.10e-54 | 171 |
| Msa0322830 | MtrunA17_Chr8g0344051 | 43.192 | 213 | 107 | 4 | 1 | 200 | 1 | 212 | 1.56e-52 | 167 |
| Msa0322830 | MtrunA17_Chr8g0344021 | 43.662 | 213 | 106 | 4 | 1 | 200 | 1 | 212 | 3.90e-52 | 166 |
| Msa0322830 | MtrunA17_Chr4g0012651 | 45.361 | 194 | 94 | 3 | 17 | 200 | 18 | 209 | 1.51e-50 | 162 |
| Msa0322830 | MtrunA17_Chr2g0302541 | 44.103 | 195 | 97 | 3 | 16 | 200 | 17 | 209 | 5.70e-50 | 160 |
| Msa0322830 | MtrunA17_Chr7g0217811 | 44.330 | 194 | 96 | 3 | 17 | 200 | 18 | 209 | 7.08e-50 | 160 |
| Msa0322830 | MtrunA17_Chr5g0411961 | 42.180 | 211 | 109 | 4 | 1 | 200 | 1 | 209 | 9.39e-50 | 160 |
| Msa0322830 | MtrunA17_Chr8g0344031 | 42.523 | 214 | 106 | 5 | 1 | 200 | 1 | 211 | 9.63e-49 | 158 |
| Msa0322830 | MtrunA17_Chr3g0115141 | 40.465 | 215 | 108 | 6 | 1 | 200 | 1 | 210 | 1.20e-47 | 155 |
| Msa0322830 | MtrunA17_Chr3g0084551 | 44.221 | 199 | 103 | 4 | 4 | 196 | 3 | 199 | 4.81e-47 | 154 |
| Msa0322830 | MtrunA17_Chr8g0344041 | 37.981 | 208 | 117 | 3 | 4 | 200 | 7 | 213 | 1.92e-45 | 149 |
| Msa0322830 | MtrunA17_Chr2g0286171 | 39.171 | 217 | 110 | 6 | 1 | 200 | 1 | 212 | 4.04e-44 | 146 |
| Msa0322830 | MtrunA17_Chr4g0007051 | 38.679 | 212 | 103 | 6 | 7 | 193 | 4 | 213 | 3.40e-34 | 120 |
| Msa0322830 | MtrunA17_Chr4g0007031 | 38.679 | 212 | 103 | 6 | 7 | 193 | 4 | 213 | 4.22e-34 | 120 |
| Msa0322830 | MtrunA17_Chr5g0419971 | 38.679 | 212 | 103 | 6 | 7 | 193 | 4 | 213 | 4.22e-34 | 120 |
| Msa0322830 | MtrunA17_Chr5g0419981 | 38.679 | 212 | 103 | 6 | 7 | 193 | 4 | 213 | 4.22e-34 | 120 |
| Msa0322830 | MtrunA17_Chr1g0189841 | 38.863 | 211 | 103 | 6 | 8 | 193 | 5 | 214 | 9.07e-34 | 120 |
| Msa0322830 | MtrunA17_Chr2g0292901 | 37.173 | 191 | 103 | 4 | 17 | 193 | 23 | 210 | 1.65e-33 | 119 |
| Msa0322830 | MtrunA17_Chr1g0210761 | 34.653 | 202 | 115 | 4 | 3 | 193 | 9 | 204 | 2.37e-33 | 118 |
| Msa0322830 | MtrunA17_Chr2g0292831 | 36.702 | 188 | 102 | 4 | 20 | 193 | 25 | 209 | 2.81e-33 | 118 |
| Msa0322830 | MtrunA17_Chr2g0285871 | 37.736 | 212 | 105 | 6 | 7 | 193 | 4 | 213 | 5.54e-33 | 117 |
| Msa0322830 | MtrunA17_Chr4g0007041 | 37.264 | 212 | 106 | 6 | 7 | 193 | 4 | 213 | 4.20e-32 | 115 |
| Msa0322830 | MtrunA17_Chr6g0449731 | 37.383 | 214 | 109 | 6 | 3 | 193 | 1 | 212 | 5.41e-32 | 115 |
| Msa0322830 | MtrunA17_Chr6g0449761 | 37.383 | 214 | 109 | 6 | 3 | 193 | 1 | 212 | 1.41e-31 | 115 |
| Msa0322830 | MtrunA17_Chr1g0178711 | 38.323 | 167 | 92 | 2 | 40 | 196 | 56 | 221 | 3.03e-31 | 113 |
| Msa0322830 | MtrunA17_Chr6g0449771 | 36.916 | 214 | 110 | 6 | 3 | 193 | 1 | 212 | 3.68e-31 | 113 |
| Msa0322830 | MtrunA17_Chr1g0193421 | 36.559 | 186 | 106 | 2 | 23 | 196 | 30 | 215 | 1.26e-30 | 111 |
| Msa0322830 | MtrunA17_Chr7g0271211 | 37.433 | 187 | 105 | 2 | 23 | 197 | 26 | 212 | 2.07e-30 | 111 |
| Msa0322830 | MtrunA17_Chr6g0449751 | 38.318 | 214 | 109 | 7 | 1 | 193 | 1 | 212 | 4.54e-30 | 110 |
| Msa0322830 | MtrunA17_Chr2g0292861 | 37.278 | 169 | 91 | 4 | 40 | 193 | 7 | 175 | 1.07e-29 | 108 |
| Msa0322830 | MtrunA17_Chr1g0156131 | 36.310 | 168 | 93 | 3 | 40 | 193 | 39 | 206 | 3.85e-29 | 107 |
| Msa0322830 | MtrunA17_Chr2g0292841 | 36.686 | 169 | 92 | 4 | 40 | 193 | 7 | 175 | 1.53e-28 | 105 |
| Msa0322830 | MtrunA17_Chr1g0193671 | 33.333 | 183 | 110 | 2 | 23 | 193 | 29 | 211 | 2.51e-26 | 100 |
| Msa0322830 | MtrunA17_Chr2g0292911 | 43.590 | 117 | 54 | 2 | 40 | 144 | 7 | 123 | 8.23e-26 | 97.1 |
| Msa0322830 | MtrunA17_Chr5g0414971 | 32.804 | 189 | 114 | 3 | 23 | 198 | 33 | 221 | 1.45e-24 | 95.9 |
| Msa0322830 | MtrunA17_Chr6g0449781 | 36.022 | 186 | 102 | 5 | 23 | 193 | 28 | 211 | 2.16e-24 | 95.5 |
| Msa0322830 | MtrunA17_Chr3g0084501 | 50.000 | 94 | 45 | 2 | 4 | 97 | 6 | 97 | 8.40e-24 | 90.9 |
| Msa0322830 | MtrunA17_Chr6g0449791 | 35.789 | 190 | 101 | 6 | 14 | 185 | 19 | 205 | 2.16e-23 | 92.8 |
| Msa0322830 | MtrunA17_Chr3g0130241 | 34.239 | 184 | 96 | 5 | 1 | 161 | 63 | 244 | 8.91e-23 | 92.8 |
| Msa0322830 | MtrunA17_Chr8g0335851 | 33.333 | 177 | 95 | 6 | 4 | 159 | 5 | 179 | 8.57e-22 | 89.0 |
| Msa0322830 | MtrunA17_Chr2g0321581 | 30.583 | 206 | 117 | 6 | 2 | 193 | 8 | 201 | 8.86e-18 | 77.8 |
| Msa0322830 | MtrunA17_Chr2g0321591 | 30.583 | 206 | 117 | 6 | 2 | 193 | 8 | 201 | 8.95e-18 | 77.8 |
| Msa0322830 | MtrunA17_Chr2g0321601 | 30.097 | 206 | 118 | 6 | 2 | 193 | 7 | 200 | 2.88e-17 | 76.6 |
| Msa0322830 | MtrunA17_Chr4g0026201 | 29.457 | 129 | 80 | 2 | 76 | 193 | 74 | 202 | 9.24e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322830 | AT5G20630.1 | 60.000 | 210 | 73 | 2 | 1 | 199 | 1 | 210 | 4.57e-82 | 243 |
| Msa0322830 | AT1G72610.1 | 59.135 | 208 | 75 | 1 | 3 | 200 | 1 | 208 | 4.43e-76 | 228 |
| Msa0322830 | AT5G39160.3 | 40.526 | 190 | 95 | 4 | 23 | 197 | 30 | 216 | 1.09e-36 | 127 |
| Msa0322830 | AT3G04200.1 | 41.885 | 191 | 95 | 4 | 23 | 197 | 33 | 223 | 8.85e-36 | 125 |
| Msa0322830 | AT5G39190.1 | 40.838 | 191 | 97 | 4 | 23 | 197 | 30 | 220 | 8.94e-36 | 125 |
| Msa0322830 | AT5G39160.1 | 40.838 | 191 | 97 | 4 | 23 | 197 | 30 | 220 | 9.14e-36 | 125 |
| Msa0322830 | AT5G39130.1 | 40.314 | 191 | 98 | 4 | 23 | 197 | 30 | 220 | 2.43e-35 | 124 |
| Msa0322830 | AT1G18970.1 | 36.232 | 207 | 116 | 4 | 1 | 193 | 11 | 215 | 1.32e-32 | 117 |
| Msa0322830 | AT5G39120.1 | 36.150 | 213 | 117 | 5 | 1 | 194 | 5 | 217 | 2.03e-32 | 116 |
| Msa0322830 | AT5G39110.1 | 37.438 | 203 | 106 | 5 | 13 | 194 | 16 | 218 | 2.17e-32 | 116 |
| Msa0322830 | AT1G18980.1 | 37.438 | 203 | 112 | 4 | 3 | 193 | 16 | 215 | 3.27e-32 | 116 |
| Msa0322830 | AT5G38960.1 | 38.776 | 196 | 95 | 6 | 23 | 197 | 32 | 223 | 1.20e-31 | 114 |
| Msa0322830 | AT3G04150.1 | 39.487 | 195 | 100 | 5 | 23 | 200 | 32 | 225 | 1.46e-31 | 114 |
| Msa0322830 | AT3G05950.1 | 39.572 | 187 | 97 | 4 | 23 | 193 | 32 | 218 | 4.54e-31 | 113 |
| Msa0322830 | AT3G04150.2 | 39.665 | 179 | 93 | 3 | 37 | 200 | 60 | 238 | 6.04e-31 | 113 |
| Msa0322830 | AT5G39150.1 | 35.349 | 215 | 118 | 5 | 1 | 194 | 3 | 217 | 6.05e-31 | 113 |
| Msa0322830 | AT1G02335.1 | 32.195 | 205 | 127 | 2 | 5 | 197 | 12 | 216 | 9.32e-31 | 112 |
| Msa0322830 | AT5G39180.1 | 35.349 | 215 | 118 | 5 | 1 | 194 | 3 | 217 | 9.89e-31 | 112 |
| Msa0322830 | AT3G62020.1 | 33.659 | 205 | 116 | 4 | 9 | 193 | 8 | 212 | 1.29e-30 | 112 |
| Msa0322830 | AT5G39190.2 | 40.506 | 158 | 79 | 3 | 55 | 197 | 41 | 198 | 3.26e-29 | 107 |
| Msa0322830 | AT4G14630.1 | 36.702 | 188 | 102 | 4 | 23 | 193 | 32 | 219 | 3.52e-29 | 108 |
| Msa0322830 | AT5G26700.1 | 33.663 | 202 | 118 | 4 | 3 | 193 | 10 | 206 | 3.78e-29 | 108 |
| Msa0322830 | AT5G39160.2 | 40.506 | 158 | 79 | 3 | 55 | 197 | 41 | 198 | 3.78e-29 | 107 |
| Msa0322830 | AT3G05930.1 | 35.096 | 208 | 121 | 4 | 1 | 194 | 6 | 213 | 3.93e-29 | 108 |
| Msa0322830 | AT5G61750.1 | 36.313 | 179 | 88 | 4 | 1 | 159 | 1 | 173 | 6.97e-29 | 107 |
| Msa0322830 | AT3G04190.1 | 37.696 | 191 | 101 | 5 | 23 | 196 | 32 | 221 | 1.58e-28 | 106 |
| Msa0322830 | AT3G04180.1 | 38.021 | 192 | 99 | 7 | 23 | 196 | 32 | 221 | 3.79e-28 | 105 |
| Msa0322830 | AT1G09560.1 | 40.123 | 162 | 87 | 1 | 23 | 174 | 30 | 191 | 4.19e-28 | 105 |
| Msa0322830 | AT3G10080.1 | 35.429 | 175 | 97 | 3 | 21 | 180 | 30 | 203 | 6.38e-28 | 105 |
| Msa0322830 | AT5G38940.1 | 41.060 | 151 | 75 | 3 | 23 | 159 | 32 | 182 | 9.00e-28 | 104 |
| Msa0322830 | AT5G38940.2 | 40.000 | 155 | 79 | 3 | 19 | 159 | 52 | 206 | 1.37e-27 | 105 |
| Msa0322830 | AT3G10080.2 | 35.429 | 175 | 97 | 3 | 21 | 180 | 101 | 274 | 1.75e-27 | 105 |
| Msa0322830 | AT3G62020.2 | 34.118 | 170 | 99 | 3 | 37 | 193 | 14 | 183 | 2.30e-27 | 102 |
| Msa0322830 | AT5G38930.1 | 36.364 | 187 | 103 | 4 | 23 | 193 | 32 | 218 | 3.75e-27 | 103 |
| Msa0322830 | AT5G38910.1 | 40.984 | 183 | 78 | 7 | 14 | 172 | 17 | 193 | 3.96e-26 | 100 |
| Msa0322830 | AT3G04170.1 | 37.173 | 191 | 99 | 6 | 23 | 196 | 32 | 218 | 1.29e-25 | 99.4 |
| Msa0322830 | AT1G74820.1 | 32.367 | 207 | 124 | 4 | 1 | 193 | 18 | 222 | 2.81e-24 | 95.9 |
| Msa0322830 | AT1G10460.1 | 31.795 | 195 | 112 | 6 | 23 | 198 | 25 | 217 | 7.81e-23 | 91.7 |
Find 44 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACCACCAACATTAATT+TGG | 0.165752 | 2_4:+26395944 | None:intergenic |
| GAAGTGTTGGTTGTTATTAA+AGG | 0.290621 | 2_4:-26396066 | Msa0322830:CDS |
| TCATTCGCGGTTACCTTTGA+TGG | 0.323535 | 2_4:+26396234 | None:intergenic |
| AAGAAGCTTAAGGGTGTTCT+TGG | 0.328993 | 2_4:-26395793 | Msa0322830:CDS |
| GAATATCCAGCCGGGCCATT+TGG | 0.346876 | 2_4:+26396267 | None:intergenic |
| ATAATGTTTGAGGTGTTTCC+AGG | 0.356335 | 2_4:+26396186 | None:intergenic |
| GCATTAGACTCACAATTTCC+CGG | 0.418602 | 2_4:-26396144 | Msa0322830:CDS |
| AAGGGTGTTCTTGGAGGTAG+TGG | 0.422600 | 2_4:-26395784 | Msa0322830:CDS |
| TCACAATTTCCCGGTGTAAA+CGG | 0.422953 | 2_4:-26396135 | Msa0322830:CDS |
| TAATCCTCGTCTAGAGATAT+TGG | 0.426743 | 2_4:-26395890 | Msa0322830:CDS |
| AGATATAGCTGTCGGTGCTT+CGG | 0.430545 | 2_4:-26396088 | Msa0322830:CDS |
| TTTCCCGGTGTAAACGGTCT+TGG | 0.446321 | 2_4:-26396129 | Msa0322830:CDS |
| CATTTCCAAATTAATGTTGG+TGG | 0.455196 | 2_4:-26395949 | Msa0322830:CDS |
| AGCGGCTTTGATAATGTTTG+AGG | 0.461127 | 2_4:+26396176 | None:intergenic |
| AATGCACCAAATGGCCCGGC+TGG | 0.461203 | 2_4:-26396273 | Msa0322830:CDS |
| AGGTGTTTCCAGGTGCGGCT+AGG | 0.473117 | 2_4:+26396196 | None:intergenic |
| TTCCAGGTGCGGCTAGGCCG+TGG | 0.474288 | 2_4:+26396202 | None:intergenic |
| TACCACGGCCTAGCCGCACC+TGG | 0.482390 | 2_4:-26396204 | Msa0322830:CDS |
| AGCTATATCTAAACGCGCAA+TGG | 0.486272 | 2_4:+26396101 | None:intergenic |
| AAGCTTAAGGGTGTTCTTGG+AGG | 0.489760 | 2_4:-26395790 | Msa0322830:CDS |
| TGCTGTAGTGAAGAAGCTTA+AGG | 0.492145 | 2_4:-26395803 | Msa0322830:CDS |
| ATTAAAGGAACAATCAGTGC+TGG | 0.495019 | 2_4:-26396051 | Msa0322830:CDS |
| GCTGTAGTGAAGAAGCTTAA+GGG | 0.505860 | 2_4:-26395802 | Msa0322830:CDS |
| GCAGATTACAATGCACCAAA+TGG | 0.532463 | 2_4:-26396282 | Msa0322830:CDS |
| TTGCATTTCCAAATTAATGT+TGG | 0.547113 | 2_4:-26395952 | Msa0322830:CDS |
| TTCTTGCAAACCACCATCAA+AGG | 0.552457 | 2_4:-26396247 | Msa0322830:CDS |
| TGTCGGTGCTTCGGAAGTGT+TGG | 0.566069 | 2_4:-26396079 | Msa0322830:CDS |
| GTTTGAGGTGTTTCCAGGTG+CGG | 0.569017 | 2_4:+26396191 | None:intergenic |
| TTACAATGCACCAAATGGCC+CGG | 0.571769 | 2_4:-26396277 | Msa0322830:CDS |
| TTCGCGGTTACCTTTGATGG+TGG | 0.572308 | 2_4:+26396237 | None:intergenic |
| AACGTAAACAACATTGTCAG+AGG | 0.574065 | 2_4:+26396020 | None:intergenic |
| ATTCCAAGACCGTTTACACC+GGG | 0.600502 | 2_4:+26396126 | None:intergenic |
| GGTTTGCAAGAATATCCAGC+CGG | 0.602375 | 2_4:+26396258 | None:intergenic |
| TGGAAATGCAACAACCCTTG+TGG | 0.605201 | 2_4:+26395964 | None:intergenic |
| TACGTTAAAACACTTCACAA+AGG | 0.610104 | 2_4:-26396003 | Msa0322830:CDS |
| TGCTACGCAGAAATCTACTA+CGG | 0.612239 | 2_4:+26396302 | None:intergenic |
| GATTCCAAGACCGTTTACAC+CGG | 0.616073 | 2_4:+26396125 | None:intergenic |
| GTTTGCAAGAATATCCAGCC+GGG | 0.622259 | 2_4:+26396259 | None:intergenic |
| GTGGTAGACGAAGTCATTCG+CGG | 0.625632 | 2_4:+26396221 | None:intergenic |
| GCGCGTTTAGATATAGCTGT+CGG | 0.657018 | 2_4:-26396096 | Msa0322830:CDS |
| AAATTGTGAGTCTAATGCAG+TGG | 0.676562 | 2_4:+26396149 | None:intergenic |
| GTCTAATGCAGTGGTAACAG+CGG | 0.682249 | 2_4:+26396158 | None:intergenic |
| TAATCCAATATCTCTAGACG+AGG | 0.697308 | 2_4:+26395886 | None:intergenic |
| GCGAATGACTTCGTCTACCA+CGG | 0.705558 | 2_4:-26396219 | Msa0322830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAGAAAAAATGAAGAAGA+TGG | + | chr2_4:26395799-26395818 | None:intergenic | 25.0% |
| !! | ATGTTATGATTTTTCCACAA+GGG | - | chr2_4:26396162-26396181 | Msa0322830:CDS | 25.0% |
| ! | TTGCATTTCCAAATTAATGT+TGG | - | chr2_4:26396188-26396207 | Msa0322830:CDS | 25.0% |
| !! | GAAGTGTTGGTTGTTATTAA+AGG | - | chr2_4:26396074-26396093 | Msa0322830:CDS | 30.0% |
| TACGTTAAAACACTTCACAA+AGG | - | chr2_4:26396137-26396156 | Msa0322830:CDS | 30.0% | |
| ! | GATGTTATGATTTTTCCACA+AGG | - | chr2_4:26396161-26396180 | Msa0322830:CDS | 30.0% |
| CATTTCCAAATTAATGTTGG+TGG | - | chr2_4:26396191-26396210 | Msa0322830:CDS | 30.0% | |
| TAGAACCACCAACATTAATT+TGG | + | chr2_4:26396199-26396218 | None:intergenic | 30.0% | |
| !! | GTTTTAGTAATCAACTCAGT+TGG | + | chr2_4:26396302-26396321 | None:intergenic | 30.0% |
| ! | ATAATGTTTGAGGTGTTTCC+AGG | + | chr2_4:26395957-26395976 | None:intergenic | 35.0% |
| AAATTGTGAGTCTAATGCAG+TGG | + | chr2_4:26395994-26396013 | None:intergenic | 35.0% | |
| ATTAAAGGAACAATCAGTGC+TGG | - | chr2_4:26396089-26396108 | Msa0322830:CDS | 35.0% | |
| AACGTAAACAACATTGTCAG+AGG | + | chr2_4:26396123-26396142 | None:intergenic | 35.0% | |
| TAATCCTCGTCTAGAGATAT+TGG | - | chr2_4:26396250-26396269 | Msa0322830:CDS | 35.0% | |
| TAATCCAATATCTCTAGACG+AGG | + | chr2_4:26396257-26396276 | None:intergenic | 35.0% | |
| TGCTACGCAGAAATCTACTA+CGG | + | chr2_4:26395841-26395860 | None:intergenic | 40.0% | |
| GCAGATTACAATGCACCAAA+TGG | - | chr2_4:26395858-26395877 | Msa0322830:CDS | 40.0% | |
| TTCTTGCAAACCACCATCAA+AGG | - | chr2_4:26395893-26395912 | Msa0322830:CDS | 40.0% | |
| !! | AGCGGCTTTGATAATGTTTG+AGG | + | chr2_4:26395967-26395986 | None:intergenic | 40.0% |
| GCATTAGACTCACAATTTCC+CGG | - | chr2_4:26395996-26396015 | Msa0322830:CDS | 40.0% | |
| TCACAATTTCCCGGTGTAAA+CGG | - | chr2_4:26396005-26396024 | Msa0322830:CDS | 40.0% | |
| AGCTATATCTAAACGCGCAA+TGG | + | chr2_4:26396042-26396061 | None:intergenic | 40.0% | |
| TGCTGTAGTGAAGAAGCTTA+AGG | - | chr2_4:26396337-26396356 | Msa0322830:CDS | 40.0% | |
| GCTGTAGTGAAGAAGCTTAA+GGG | - | chr2_4:26396338-26396357 | Msa0322830:CDS | 40.0% | |
| !! | AAGAAGCTTAAGGGTGTTCT+TGG | - | chr2_4:26396347-26396366 | Msa0322830:CDS | 40.0% |
| TTACAATGCACCAAATGGCC+CGG | - | chr2_4:26395863-26395882 | Msa0322830:CDS | 45.0% | |
| GTTTGCAAGAATATCCAGCC+GGG | + | chr2_4:26395884-26395903 | None:intergenic | 45.0% | |
| GGTTTGCAAGAATATCCAGC+CGG | + | chr2_4:26395885-26395904 | None:intergenic | 45.0% | |
| TCATTCGCGGTTACCTTTGA+TGG | + | chr2_4:26395909-26395928 | None:intergenic | 45.0% | |
| GTCTAATGCAGTGGTAACAG+CGG | + | chr2_4:26395985-26396004 | None:intergenic | 45.0% | |
| ATTCCAAGACCGTTTACACC+GGG | + | chr2_4:26396017-26396036 | None:intergenic | 45.0% | |
| GATTCCAAGACCGTTTACAC+CGG | + | chr2_4:26396018-26396037 | None:intergenic | 45.0% | |
| GCGCGTTTAGATATAGCTGT+CGG | - | chr2_4:26396044-26396063 | Msa0322830:CDS | 45.0% | |
| ! | AGATATAGCTGTCGGTGCTT+CGG | - | chr2_4:26396052-26396071 | Msa0322830:CDS | 45.0% |
| TGGAAATGCAACAACCCTTG+TGG | + | chr2_4:26396179-26396198 | None:intergenic | 45.0% | |
| !! | AAGCTTAAGGGTGTTCTTGG+AGG | - | chr2_4:26396350-26396369 | Msa0322830:CDS | 45.0% |
| TTCGCGGTTACCTTTGATGG+TGG | + | chr2_4:26395906-26395925 | None:intergenic | 50.0% | |
| GTGGTAGACGAAGTCATTCG+CGG | + | chr2_4:26395922-26395941 | None:intergenic | 50.0% | |
| GCGAATGACTTCGTCTACCA+CGG | - | chr2_4:26395921-26395940 | Msa0322830:CDS | 50.0% | |
| ! | GTTTGAGGTGTTTCCAGGTG+CGG | + | chr2_4:26395952-26395971 | None:intergenic | 50.0% |
| TTTCCCGGTGTAAACGGTCT+TGG | - | chr2_4:26396011-26396030 | Msa0322830:CDS | 50.0% | |
| !! | AAGGGTGTTCTTGGAGGTAG+TGG | - | chr2_4:26396356-26396375 | Msa0322830:CDS | 50.0% |
| GAATATCCAGCCGGGCCATT+TGG | + | chr2_4:26395876-26395895 | None:intergenic | 55.0% | |
| ! | TGTCGGTGCTTCGGAAGTGT+TGG | - | chr2_4:26396061-26396080 | Msa0322830:CDS | 55.0% |
| AATGCACCAAATGGCCCGGC+TGG | - | chr2_4:26395867-26395886 | Msa0322830:CDS | 60.0% | |
| AGGTGTTTCCAGGTGCGGCT+AGG | + | chr2_4:26395947-26395966 | None:intergenic | 60.0% | |
| TACCACGGCCTAGCCGCACC+TGG | - | chr2_4:26395936-26395955 | Msa0322830:CDS | 70.0% | |
| TTCCAGGTGCGGCTAGGCCG+TGG | + | chr2_4:26395941-26395960 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 26395780 | 26396382 | 26395780 | ID=Msa0322830;Name=Msa0322830 |
| chr2_4 | mRNA | 26395780 | 26396382 | 26395780 | ID=Msa0322830-mRNA-1;Parent=Msa0322830;Name=Msa0322830-mRNA-1;_AED=0.38;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|200 |
| chr2_4 | exon | 26395780 | 26396382 | 26395780 | ID=Msa0322830-mRNA-1:exon:9215;Parent=Msa0322830-mRNA-1 |
| chr2_4 | CDS | 26395780 | 26396382 | 26395780 | ID=Msa0322830-mRNA-1:cds;Parent=Msa0322830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
