AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1457100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457100 MtrunA17_Chr5g0419451 96.899 516 16 0 1 516 1 516 0.0 1029
Msa1457100 MtrunA17_Chr8g0377341 54.004 487 206 7 38 517 50 525 4.82e-179 513
Msa1457100 MtrunA17_Chr8g0346261 50.386 518 217 9 33 517 35 545 4.29e-170 491
Msa1457100 MtrunA17_Chr1g0200951 49.699 499 230 11 34 517 36 528 2.81e-155 453
Msa1457100 MtrunA17_Chr4g0058231 35.699 479 281 13 54 512 22 493 1.06e-85 273
Msa1457100 MtrunA17_Chr3g0086661 34.475 467 273 10 75 517 49 506 5.08e-81 261
Msa1457100 MtrunA17_Chr7g0255531 35.000 480 275 13 62 517 30 496 1.03e-80 260
Msa1457100 MtrunA17_Chr4g0061381 33.262 466 278 12 75 517 48 503 4.08e-80 259
Msa1457100 MtrunA17_Chr3g0086651 34.261 467 274 10 75 517 49 506 6.01e-80 259
Msa1457100 MtrunA17_Chr3g0116741 33.269 517 305 15 17 515 20 514 2.43e-79 257
Msa1457100 MtrunA17_Chr3g0094171 32.220 509 324 11 23 517 6 507 6.42e-79 256
Msa1457100 MtrunA17_Chr4g0058201 35.123 447 266 14 54 486 22 458 1.52e-78 254
Msa1457100 MtrunA17_Chr4g0047661 32.490 514 315 12 16 512 14 512 2.78e-78 254
Msa1457100 MtrunA17_Chr3g0086691 32.189 466 285 11 75 517 49 506 7.52e-78 253
Msa1457100 MtrunA17_Chr4g0058191 32.800 500 312 14 27 516 2 487 1.17e-76 249
Msa1457100 MtrunA17_Chr8g0344151 33.263 472 294 9 62 517 38 504 2.48e-75 246
Msa1457100 MtrunA17_Chr4g0047691 34.025 482 292 14 47 512 39 510 8.27e-75 245
Msa1457100 MtrunA17_Chr1g0174481 31.174 494 324 9 36 517 10 499 2.25e-74 244
Msa1457100 MtrunA17_Chr4g0047641 31.549 523 323 14 12 512 2 511 3.32e-74 244
Msa1457100 MtrunA17_Chr8g0344181 33.475 472 293 10 62 517 40 506 6.29e-73 240
Msa1457100 MtrunA17_Chr1g0174471 31.621 506 311 14 36 517 26 520 8.28e-73 240
Msa1457100 MtrunA17_Chr6g0484841 31.315 479 293 14 62 518 39 503 9.08e-73 239
Msa1457100 MtrunA17_Chr4g0047631 31.456 515 315 15 15 512 14 507 1.78e-72 239
Msa1457100 MtrunA17_Chr7g0235551 32.809 509 307 14 33 516 8 506 2.78e-72 238
Msa1457100 MtrunA17_Chr5g0403351 30.444 496 307 13 24 497 2 481 3.26e-72 238
Msa1457100 MtrunA17_Chr2g0310391 32.231 484 306 12 47 517 19 493 6.85e-72 237
Msa1457100 MtrunA17_Chr3g0094231 32.000 475 305 10 55 517 31 499 7.22e-72 237
Msa1457100 MtrunA17_Chr2g0310381 32.225 481 301 12 27 497 6 471 7.86e-72 237
Msa1457100 MtrunA17_Chr3g0116681 30.709 508 317 16 29 518 14 504 1.06e-71 237
Msa1457100 MtrunA17_Chr6g0484811 33.830 470 284 13 62 512 39 500 4.09e-71 235
Msa1457100 MtrunA17_Chr3g0082701 31.203 532 317 16 20 517 7 523 1.74e-70 234
Msa1457100 MtrunA17_Chr8g0390881 30.588 510 322 13 23 512 2 499 4.52e-70 233
Msa1457100 MtrunA17_Chr7g0254641 30.146 481 306 11 62 517 39 514 7.79e-70 232
Msa1457100 MtrunA17_Chr6g0451781 33.065 496 298 14 50 517 66 555 9.23e-70 233
Msa1457100 MtrunA17_Chr4g0058281 30.645 496 321 12 37 515 23 512 1.00e-69 232
Msa1457100 MtrunA17_Chr3g0101711 32.906 468 287 12 36 486 13 470 1.30e-69 231
Msa1457100 MtrunA17_Chr8g0344191 32.489 474 296 11 62 517 71 538 2.02e-69 232
Msa1457100 MtrunA17_Chr3g0084921 32.640 481 282 14 62 512 37 505 3.03e-69 230
Msa1457100 MtrunA17_Chr1g0156101 31.515 495 302 17 52 517 24 510 4.86e-69 230
Msa1457100 MtrunA17_Chr4g0011921 32.432 481 292 11 19 486 2 462 8.89e-69 229
Msa1457100 MtrunA17_Chr1g0174451 29.249 506 326 12 34 517 10 505 1.34e-68 229
Msa1457100 MtrunA17_Chr1g0160851 29.583 480 318 9 49 516 23 494 1.41e-68 228
Msa1457100 MtrunA17_Chr8g0382901 32.025 484 310 11 44 516 476 951 1.71e-68 237
Msa1457100 MtrunA17_Chr8g0382901 31.603 443 272 9 53 486 21 441 8.75e-66 229
Msa1457100 MtrunA17_Chr4g0020041 33.333 477 283 14 29 486 8 468 1.74e-68 228
Msa1457100 MtrunA17_Chr4g0035921 32.112 464 276 15 62 497 39 491 2.06e-68 228
Msa1457100 MtrunA17_Chr2g0296651 30.099 505 320 11 27 516 5 491 2.19e-68 228
Msa1457100 MtrunA17_Chr5g0430081 30.898 479 303 12 36 496 11 479 4.64e-68 227
Msa1457100 MtrunA17_Chr4g0058261 31.070 486 315 11 47 515 49 531 5.54e-68 228
Msa1457100 MtrunA17_Chr4g0046631 32.479 468 291 13 68 517 57 517 1.60e-67 226
Msa1457100 MtrunA17_Chr8g0356001 31.703 511 320 15 20 516 8 503 1.61e-67 226
Msa1457100 MtrunA17_Chr7g0246121 29.646 452 303 8 75 515 51 498 2.09e-67 225
Msa1457100 MtrunA17_Chr1g0197851 30.702 456 283 11 48 486 22 461 2.21e-67 225
Msa1457100 MtrunA17_Chr7g0246221 31.111 450 289 12 52 486 26 469 2.64e-67 225
Msa1457100 MtrunA17_Chr8g0372251 33.708 445 265 11 62 486 37 471 3.00e-67 225
Msa1457100 MtrunA17_Chr1g0197871 29.854 479 296 12 25 486 6 461 3.36e-67 224
Msa1457100 MtrunA17_Chr3g0101621 32.278 474 286 15 27 486 5 457 4.81e-67 224
Msa1457100 MtrunA17_Chr6g0472311 30.426 516 325 15 26 516 10 516 9.66e-67 224
Msa1457100 MtrunA17_Chr5g0405001 32.009 453 261 13 62 486 46 479 1.02e-66 224
Msa1457100 MtrunA17_Chr1g0197891 31.222 442 271 11 62 486 36 461 1.04e-66 223
Msa1457100 MtrunA17_Chr6g0451641 31.478 521 321 17 21 516 5 514 1.20e-66 224
Msa1457100 MtrunA17_Chr4g0011901 32.867 429 273 10 94 510 64 489 1.27e-66 223
Msa1457100 MtrunA17_Chr1g0197881 31.222 442 271 11 62 486 35 460 1.67e-66 223
Msa1457100 MtrunA17_Chr3g0101651 32.816 451 270 12 56 486 34 471 1.72e-66 223
Msa1457100 MtrunA17_Chr5g0430131 30.588 510 321 14 25 516 6 500 1.94e-66 223
Msa1457100 MtrunA17_Chr3g0101601 31.579 475 290 15 29 486 7 463 2.21e-66 223
Msa1457100 MtrunA17_Chr7g0258221 30.219 503 327 10 33 517 8 504 4.87e-66 222
Msa1457100 MtrunA17_Chr5g0395321 31.839 446 286 8 46 486 31 463 5.03e-66 223
Msa1457100 MtrunA17_Chr5g0403331 29.630 486 306 14 21 486 1 470 6.01e-66 221
Msa1457100 MtrunA17_Chr3g0101691 32.599 454 269 13 55 486 33 471 6.60e-66 221
Msa1457100 MtrunA17_Chr1g0200961 31.013 474 307 10 58 516 26 494 9.00e-66 221
Msa1457100 MtrunA17_Chr3g0101731 32.192 438 268 13 64 486 44 467 1.08e-65 221
Msa1457100 MtrunA17_Chr3g0101701 32.517 449 274 12 56 486 34 471 1.63e-65 220
Msa1457100 MtrunA17_Chr5g0431641 30.962 478 292 14 25 486 11 466 2.16e-65 220
Msa1457100 MtrunA17_Chr3g0101631 31.656 477 289 16 27 486 6 462 2.19e-65 220
Msa1457100 MtrunA17_Chr1g0164211 30.851 470 299 13 62 516 33 491 3.20e-65 219
Msa1457100 MtrunA17_Chr1g0162811 31.264 451 281 12 52 486 29 466 3.41e-65 219
Msa1457100 MtrunA17_Chr4g0039391 32.222 450 288 10 79 517 56 499 3.43e-65 219
Msa1457100 MtrunA17_Chr1g0174441 31.211 487 306 14 51 517 49 526 4.12e-65 220
Msa1457100 MtrunA17_Chr5g0445441 30.208 480 307 13 21 486 42 507 5.62e-65 220
Msa1457100 MtrunA17_Chr8g0339311 28.679 530 344 14 12 517 2 521 6.77e-65 219
Msa1457100 MtrunA17_Chr5g0430091 30.620 516 323 13 19 516 3 501 1.12e-64 218
Msa1457100 MtrunA17_Chr5g0395331 30.247 486 315 12 46 516 26 502 2.02e-64 218
Msa1457100 MtrunA17_Chr3g0101581 28.824 510 338 13 21 516 1 499 2.68e-64 217
Msa1457100 MtrunA17_Chr5g0430101 30.078 512 319 18 25 516 6 498 2.77e-64 217
Msa1457100 MtrunA17_Chr1g0205371 30.736 462 310 7 62 516 37 495 2.82e-64 217
Msa1457100 MtrunA17_Chr8g0362701 30.108 465 295 13 73 517 50 504 2.88e-64 217
Msa1457100 MtrunA17_Chr3g0101661 31.473 448 281 11 55 486 33 470 3.12e-64 217
Msa1457100 MtrunA17_Chr8g0362481 29.864 442 284 11 95 517 1 435 3.75e-64 215
Msa1457100 MtrunA17_Chr4g0011961 31.884 414 267 9 82 486 54 461 3.82e-64 216
Msa1457100 MtrunA17_Chr1g0205361 27.941 476 325 8 47 510 21 490 5.00e-64 216
Msa1457100 MtrunA17_Chr5g0403321 29.237 472 303 12 48 497 22 484 8.73e-64 216
Msa1457100 MtrunA17_Chr6g0451751 32.724 492 297 14 51 516 38 521 1.18e-63 216
Msa1457100 MtrunA17_Chr4g0057001 29.876 482 318 9 49 517 39 513 1.45e-63 216
Msa1457100 MtrunA17_Chr2g0314721 28.216 482 325 11 15 486 4 474 1.79e-63 215
Msa1457100 MtrunA17_Chr2g0296661 31.808 459 277 12 79 516 53 496 1.96e-63 215
Msa1457100 MtrunA17_Chr4g0039901 29.067 461 310 9 62 510 37 492 1.99e-63 215
Msa1457100 MtrunA17_Chr5g0445461 29.938 481 307 12 21 486 1 466 1.99e-63 215
Msa1457100 MtrunA17_Chr6g0451691 32.083 480 289 13 68 516 52 525 2.28e-63 215
Msa1457100 MtrunA17_Chr7g0218611 31.873 411 250 10 94 486 68 466 2.30e-63 214
Msa1457100 MtrunA17_Chr3g0101721 30.892 437 276 12 64 486 45 469 2.54e-63 214
Msa1457100 MtrunA17_Chr3g0101611 30.042 476 307 11 52 510 30 496 2.62e-63 214
Msa1457100 MtrunA17_Chr5g0430031 29.084 502 331 11 32 516 8 501 3.67e-63 214
Msa1457100 MtrunA17_Chr2g0304871 31.263 499 311 14 45 517 21 513 6.13e-63 214
Msa1457100 MtrunA17_Chr5g0395381 30.063 479 288 11 46 516 31 470 7.25e-63 213
Msa1457100 MtrunA17_Chr1g0174461 31.197 468 295 13 68 517 46 504 9.68e-63 213
Msa1457100 MtrunA17_Chr4g0030701 30.296 439 285 7 88 507 63 499 2.40e-62 213
Msa1457100 MtrunA17_Chr6g0466941 31.337 501 306 16 49 517 22 516 2.78e-62 212
Msa1457100 MtrunA17_Chr5g0446161 28.825 451 284 11 54 486 35 466 3.33e-62 211
Msa1457100 MtrunA17_Chr5g0401681 28.628 503 327 12 28 514 3 489 3.68e-62 211
Msa1457100 MtrunA17_Chr6g0463791 30.591 474 297 12 30 486 7 465 5.84e-62 211
Msa1457100 MtrunA17_Chr8g0361471 31.209 455 270 14 57 486 31 467 2.48e-61 209
Msa1457100 MtrunA17_Chr3g0101571 29.915 468 302 13 32 486 11 465 4.60e-61 208
Msa1457100 MtrunA17_Chr6g0463801 29.560 477 313 12 52 516 29 494 4.75e-61 208
Msa1457100 MtrunA17_Chr3g0101821 30.544 478 300 14 27 486 4 467 9.19e-61 208
Msa1457100 MtrunA17_Chr4g0056951 30.667 450 295 9 79 517 65 508 1.03e-60 208
Msa1457100 MtrunA17_Chr4g0008101 30.741 540 324 18 8 517 3 522 1.26e-60 208
Msa1457100 MtrunA17_Chr5g0445451 29.707 478 312 12 21 486 1 466 1.44e-60 207
Msa1457100 MtrunA17_Chr4g0052861 28.458 506 324 13 31 516 4 491 1.65e-60 207
Msa1457100 MtrunA17_Chr8g0339331 31.315 479 301 15 62 517 40 513 1.66e-60 207
Msa1457100 MtrunA17_Chr3g0101671 31.169 462 275 14 50 486 28 471 1.76e-60 207
Msa1457100 MtrunA17_Chr7g0218601 30.846 402 264 8 94 486 69 465 1.77e-60 207
Msa1457100 MtrunA17_Chr8g0355961 30.814 516 318 17 20 516 8 503 2.03e-60 207
Msa1457100 MtrunA17_Chr7g0265611 30.864 486 308 12 52 517 38 515 2.54e-60 207
Msa1457100 MtrunA17_Chr6g0451741 30.888 518 324 13 26 517 35 544 4.19e-60 207
Msa1457100 MtrunA17_Chr7g0246151 29.466 431 280 10 75 490 51 472 4.63e-60 206
Msa1457100 MtrunA17_Chr4g0011981 31.841 402 262 7 94 486 64 462 6.42e-60 205
Msa1457100 MtrunA17_Chr5g0431671 29.122 467 307 12 64 517 46 501 9.39e-60 205
Msa1457100 MtrunA17_Chr5g0445531 30.649 447 285 11 53 486 31 465 9.57e-60 205
Msa1457100 MtrunA17_Chr6g0465511 31.209 455 270 14 57 486 31 467 1.31e-59 205
Msa1457100 MtrunA17_Chr4g0076161 29.209 493 306 14 30 497 7 481 2.27e-59 204
Msa1457100 MtrunA17_Chr1g0176831 28.662 471 314 13 29 486 32 493 2.51e-59 204
Msa1457100 MtrunA17_Chr2g0314731 28.381 451 303 12 48 486 21 463 2.77e-59 203
Msa1457100 MtrunA17_Chr4g0030711 28.384 458 298 8 88 517 65 520 3.42e-59 204
Msa1457100 MtrunA17_Chr3g0101761 31.718 454 280 13 51 486 26 467 6.34e-59 203
Msa1457100 MtrunA17_Chr6g0466331 31.209 455 270 14 57 486 31 467 1.17e-58 202
Msa1457100 MtrunA17_Chr5g0446151 27.992 493 304 14 52 516 29 498 1.24e-58 202
Msa1457100 MtrunA17_Chr4g0053621 31.635 373 236 6 137 498 111 475 1.25e-58 202
Msa1457100 MtrunA17_Chr3g0101751 31.347 453 281 13 52 486 34 474 1.46e-58 202
Msa1457100 MtrunA17_Chr3g0101811 31.957 460 266 17 58 486 39 482 2.95e-58 201
Msa1457100 MtrunA17_Chr6g0466901 30.847 496 305 16 54 517 26 515 3.20e-58 201
Msa1457100 MtrunA17_Chr7g0224561 28.512 477 305 11 33 486 5 468 3.63e-58 201
Msa1457100 MtrunA17_Chr1g0167321 32.696 471 281 14 36 486 12 466 4.36e-58 201
Msa1457100 MtrunA17_Chr4g0052881 31.183 372 235 6 137 498 112 472 4.44e-58 200
Msa1457100 MtrunA17_Chr1g0156081 30.691 492 310 14 52 517 48 534 5.27e-58 201
Msa1457100 MtrunA17_Chr5g0401691 32.105 380 244 8 143 516 137 508 1.51e-57 199
Msa1457100 MtrunA17_Chr7g0224551 28.302 477 306 11 33 486 5 468 1.61e-57 199
Msa1457100 MtrunA17_Chr7g0246181 29.258 458 299 9 75 515 51 500 1.67e-57 199
Msa1457100 MtrunA17_Chr3g0101801 29.783 460 293 13 45 486 27 474 1.84e-57 199
Msa1457100 MtrunA17_Chr7g0258211 29.505 444 288 10 88 512 67 504 2.56e-57 199
Msa1457100 MtrunA17_Chr5g0419691 30.137 438 287 10 62 486 31 462 2.58e-57 198
Msa1457100 MtrunA17_Chr7g0246131 29.253 482 312 14 54 514 28 501 7.82e-57 197
Msa1457100 MtrunA17_Chr1g0162801 30.947 475 300 11 29 486 6 469 1.07e-56 197
Msa1457100 MtrunA17_Chr5g0431511 28.676 408 281 5 88 486 62 468 3.53e-56 196
Msa1457100 MtrunA17_Chr4g0024771 27.521 476 318 10 20 486 9 466 4.62e-56 195
Msa1457100 MtrunA17_Chr1g0207841 28.538 431 286 8 94 505 72 499 2.73e-55 194
Msa1457100 MtrunA17_Chr4g0011871 29.613 439 289 11 62 486 31 463 2.87e-55 193
Msa1457100 MtrunA17_Chr4g0011881 30.543 442 279 13 62 486 32 462 3.68e-55 192
Msa1457100 MtrunA17_Chr4g0052851 29.087 471 304 14 58 516 31 483 3.68e-55 192
Msa1457100 MtrunA17_Chr4g0074581 28.516 512 336 13 30 518 39 543 4.84e-55 193
Msa1457100 MtrunA17_Chr8g0357421 32.798 436 267 14 64 486 45 467 5.60e-55 192
Msa1457100 MtrunA17_Chr5g0431501 28.641 412 276 8 88 486 62 468 7.17e-55 192
Msa1457100 MtrunA17_Chr5g0431461 28.641 412 276 8 88 486 62 468 7.17e-55 192
Msa1457100 MtrunA17_Chr5g0445381 29.981 517 324 18 17 517 37 531 8.84e-55 192
Msa1457100 MtrunA17_Chr5g0406651 30.068 439 286 10 62 486 32 463 1.28e-54 191
Msa1457100 MtrunA17_Chr4g0017411 28.875 471 305 13 58 516 28 480 4.65e-54 189
Msa1457100 MtrunA17_Chr6g0458561 29.668 482 302 16 62 517 56 526 1.16e-53 189
Msa1457100 MtrunA17_Chr3g0101741 29.002 431 278 12 95 511 1 417 3.23e-53 186
Msa1457100 MtrunA17_Chr5g0430071 34.161 322 191 9 208 516 41 354 5.80e-53 183
Msa1457100 MtrunA17_Chr1g0213671 29.053 475 311 12 62 516 36 504 1.02e-52 186
Msa1457100 MtrunA17_Chr8g0357431 31.350 437 273 13 64 486 45 468 1.32e-52 186
Msa1457100 MtrunA17_Chr5g0445421 28.222 450 270 11 54 486 106 519 1.46e-52 187
Msa1457100 MtrunA17_Chr1g0160861 31.953 338 204 10 190 516 13 335 2.73e-51 178
Msa1457100 MtrunA17_Chr3g0101831 30.180 444 281 13 58 486 39 468 1.28e-50 181
Msa1457100 MtrunA17_Chr2g0280261 29.892 465 289 12 52 497 26 472 1.63e-49 177
Msa1457100 MtrunA17_Chr1g0198191 27.376 526 336 19 14 517 14 515 3.15e-49 177
Msa1457100 MtrunA17_Chr8g0351801 29.454 421 263 11 121 512 98 513 4.77e-49 177
Msa1457100 MtrunA17_Chr5g0432751 28.764 445 293 14 62 488 35 473 1.89e-48 174
Msa1457100 MtrunA17_Chr2g0280081 30.993 413 268 8 119 517 595 1004 2.45e-48 179
Msa1457100 MtrunA17_Chr2g0280081 28.678 401 267 9 119 504 94 490 6.32e-42 160
Msa1457100 MtrunA17_Chr4g0058211 40.099 202 119 2 317 517 16 216 1.42e-47 164
Msa1457100 MtrunA17_Chr5g0430111 29.612 412 255 14 55 443 28 427 1.92e-47 170
Msa1457100 MtrunA17_Chr1g0210091 26.535 505 336 16 14 498 27 516 9.01e-47 171
Msa1457100 MtrunA17_Chr5g0431591 32.210 267 171 4 227 486 21 284 1.17e-46 165
Msa1457100 MtrunA17_Chr8g0387101 29.148 446 286 13 94 517 69 506 1.24e-46 170
Msa1457100 MtrunA17_Chr2g0280121 30.404 421 262 14 119 517 98 509 5.10e-46 168
Msa1457100 MtrunA17_Chr4g0046321 25.100 502 326 14 53 518 24 511 3.66e-45 166
Msa1457100 MtrunA17_Chr3g0107541 27.500 440 292 14 99 517 92 525 4.31e-45 166
Msa1457100 MtrunA17_Chr4g0046351 24.949 493 327 12 53 517 24 501 7.46e-45 165
Msa1457100 MtrunA17_Chr2g0280071 29.540 413 274 8 119 517 127 536 9.65e-45 167
Msa1457100 MtrunA17_Chr6g0451771 37.727 220 131 3 302 516 1 219 5.02e-44 155
Msa1457100 MtrunA17_Chr4g0046331 23.211 517 354 10 27 512 5 509 5.46e-44 162
Msa1457100 MtrunA17_Chr6g0451681 37.705 244 143 6 281 516 232 474 5.96e-44 162
Msa1457100 MtrunA17_Chr1g0174431 36.715 207 120 3 320 517 1 205 1.00e-43 154
Msa1457100 MtrunA17_Chr1g0156061 26.294 483 274 13 52 516 47 465 6.53e-43 159
Msa1457100 MtrunA17_Chr3g0107611 26.337 486 318 13 62 517 56 531 9.18e-43 159
Msa1457100 MtrunA17_Chr2g0280041 28.814 413 277 7 119 517 126 535 1.21e-42 159
Msa1457100 MtrunA17_Chr8g0370641 26.151 478 326 14 62 517 46 518 7.84e-42 157
Msa1457100 MtrunA17_Chr8g0370651 26.113 494 333 16 51 517 34 522 8.99e-42 157
Msa1457100 MtrunA17_Chr4g0046681 38.000 200 121 2 320 517 31 229 9.62e-42 149
Msa1457100 MtrunA17_Chr6g0451811 37.745 204 124 2 316 517 1 203 1.30e-41 148
Msa1457100 MtrunA17_Chr8g0364651 28.910 422 258 16 120 517 95 498 3.10e-41 154
Msa1457100 MtrunA17_Chr5g0409051 28.733 442 273 19 104 517 81 508 1.18e-40 153
Msa1457100 MtrunA17_Chr5g0413911 28.241 432 274 13 116 517 103 528 8.62e-40 151
Msa1457100 MtrunA17_Chr8g0390871 35.023 217 136 4 303 516 9 223 9.95e-40 144
Msa1457100 MtrunA17_Chr4g0011941 38.922 167 101 1 320 486 1 166 2.46e-39 142
Msa1457100 MtrunA17_Chr2g0280011 38.318 214 120 5 313 517 1 211 8.48e-39 140
Msa1457100 MtrunA17_Chr4g0011851 36.111 180 114 1 307 486 3 181 1.81e-38 140
Msa1457100 MtrunA17_Chr4g0046661 37.264 212 128 3 310 517 13 223 4.50e-38 139
Msa1457100 MtrunA17_Chr3g0115011 83.784 74 12 0 440 513 1 74 1.13e-37 134
Msa1457100 MtrunA17_Chr2g0280061 37.383 214 122 5 313 517 1 211 3.14e-37 136
Msa1457100 MtrunA17_Chr2g0310351 35.789 190 120 2 320 508 1 189 2.10e-36 134
Msa1457100 MtrunA17_Chr5g0402981 35.602 191 119 3 330 517 2 191 5.73e-36 132
Msa1457100 MtrunA17_Chr5g0446101 27.551 294 199 5 230 516 24 310 3.31e-35 134
Msa1457100 MtrunA17_Chr6g0463621 35.673 171 104 2 320 486 1 169 5.16e-33 124
Msa1457100 MtrunA17_Chr5g0445351 40.426 141 83 1 346 486 50 189 3.16e-32 123
Msa1457100 MtrunA17_Chr2g0314781 34.437 151 98 1 336 486 1 150 3.89e-32 121
Msa1457100 MtrunA17_Chr2g0334021 23.422 491 315 18 60 518 38 499 7.78e-32 128
Msa1457100 MtrunA17_Chr3g0101591 33.728 169 111 1 318 486 37 204 8.55e-32 122
Msa1457100 MtrunA17_Chr3g0107551 31.034 203 134 4 319 517 4 204 3.02e-31 120
Msa1457100 MtrunA17_Chr3g0105761 33.673 196 122 6 326 517 6 197 8.53e-31 119
Msa1457100 MtrunA17_Chr4g0046701 37.342 158 96 2 362 517 1 157 1.61e-30 116
Msa1457100 MtrunA17_Chr5g0445761 38.922 167 101 1 320 486 1 166 2.09e-30 117
Msa1457100 MtrunA17_Chr5g0430041 39.597 149 87 3 350 496 5 152 2.77e-30 116
Msa1457100 MtrunA17_Chr5g0445371 33.333 216 105 5 276 486 15 196 4.77e-30 117
Msa1457100 MtrunA17_Chr8g0364631 25.451 499 321 17 54 518 26 507 7.89e-30 122
Msa1457100 MtrunA17_Chr3g0117301 43.966 116 64 1 371 486 1 115 1.62e-29 112
Msa1457100 MtrunA17_Chr6g0477081 30.859 256 158 6 180 431 1 241 2.93e-29 115
Msa1457100 MtrunA17_Chr2g0313771 26.185 401 267 13 100 486 109 494 5.18e-29 120
Msa1457100 MtrunA17_Chr3g0086681 38.415 164 93 3 361 517 6 168 8.83e-29 112
Msa1457100 MtrunA17_Chr5g0423621 33.516 182 117 3 336 516 1 179 2.95e-28 110
Msa1457100 MtrunA17_Chr5g0430151 38.255 149 89 3 350 496 5 152 5.35e-28 110
Msa1457100 MtrunA17_Chr5g0444981 32.821 195 125 4 325 515 16 208 1.11e-27 110
Msa1457100 MtrunA17_Chr8g0351391 23.974 463 312 18 79 517 65 511 2.72e-26 112
Msa1457100 MtrunA17_Chr3g0116731 48.214 112 53 3 371 482 1 107 1.63e-25 102
Msa1457100 MtrunA17_Chr7g0215181 26.611 357 232 14 146 491 148 485 2.38e-25 109
Msa1457100 MtrunA17_Chr6g0457421 24.513 359 250 12 146 496 146 491 2.04e-24 106
Msa1457100 MtrunA17_Chr2g0313761 24.299 428 293 14 73 484 68 480 2.42e-24 106
Msa1457100 MtrunA17_Chr8g0351311 23.922 464 314 20 79 518 65 513 4.82e-24 105
Msa1457100 MtrunA17_Chr3g0101541 39.496 119 71 1 368 486 1 118 1.04e-23 96.7
Msa1457100 MtrunA17_Chr8g0354571 24.561 399 273 12 100 484 109 493 2.27e-23 103
Msa1457100 MtrunA17_Chr1g0204271 24.379 443 278 20 79 485 56 477 4.61e-23 102
Msa1457100 MtrunA17_Chr4g0030741 29.965 287 173 8 69 343 79 349 5.71e-23 100
Msa1457100 MtrunA17_Chr1g0203141 28.099 242 159 6 262 494 262 497 7.12e-23 102
Msa1457100 MtrunA17_Chr5g0445361 45.652 92 50 0 395 486 12 103 8.03e-23 94.4
Msa1457100 MtrunA17_Chr2g0313791 23.733 434 288 15 73 486 72 482 1.11e-22 101
Msa1457100 MtrunA17_Chr0c19g0493771 23.373 415 273 15 97 486 224 618 1.81e-22 101
Msa1457100 MtrunA17_Chr4g0046671 26.978 278 179 9 54 312 35 307 2.59e-22 97.8
Msa1457100 MtrunA17_Chr2g0313821 25.178 421 280 15 79 484 85 485 2.94e-22 100
Msa1457100 MtrunA17_Chr4g0046691 29.412 255 157 8 68 312 50 291 3.24e-22 97.4
Msa1457100 MtrunA17_Chr2g0288661 23.618 398 278 12 100 484 103 487 1.30e-21 98.2
Msa1457100 MtrunA17_Chr2g0313751 24.419 430 290 14 73 484 100 512 1.55e-21 98.2
Msa1457100 MtrunA17_Chr8g0381571 23.077 494 323 16 9 488 13 463 1.82e-21 97.4
Msa1457100 MtrunA17_Chr4g0028321 45.055 91 49 1 397 486 33 123 1.94e-21 91.3
Msa1457100 MtrunA17_Chr6g0451801 28.391 317 196 10 21 314 8 316 2.27e-21 95.1
Msa1457100 MtrunA17_Chr5g0396521 23.800 479 300 18 93 518 105 571 2.38e-21 97.4
Msa1457100 MtrunA17_Chr2g0313831 24.941 425 276 16 79 484 85 485 2.61e-21 97.1
Msa1457100 MtrunA17_Chr6g0472221 31.606 193 121 5 308 494 321 508 3.38e-21 97.1
Msa1457100 MtrunA17_Chr4g0004601 23.762 404 274 14 97 484 115 500 3.71e-21 96.7
Msa1457100 MtrunA17_Chr1g0179811 25.117 426 260 15 97 488 114 514 4.22e-21 96.7
Msa1457100 MtrunA17_Chr2g0313801 25.938 320 211 11 180 484 177 485 4.82e-21 96.3
Msa1457100 MtrunA17_Chr5g0402971 29.603 277 178 10 51 314 37 309 5.82e-21 94.0
Msa1457100 MtrunA17_Chr8g0381541 23.274 507 330 18 9 499 13 476 7.00e-21 95.5
Msa1457100 MtrunA17_Chr2g0313781 23.529 442 292 15 73 484 72 497 7.59e-21 95.9
Msa1457100 MtrunA17_Chr4g0063221 31.844 179 116 4 322 496 327 503 8.16e-21 95.9
Msa1457100 MtrunA17_Chr2g0313811 23.113 424 285 14 89 486 91 499 1.12e-20 95.1
Msa1457100 MtrunA17_Chr1g0203151 34.337 166 101 4 322 484 320 480 2.49e-20 94.0
Msa1457100 MtrunA17_Chr2g0293411 24.898 490 295 19 30 485 8 458 2.51e-20 94.0
Msa1457100 MtrunA17_Chr7g0260821 24.079 407 274 15 102 488 83 474 2.57e-20 94.0
Msa1457100 MtrunA17_Chr7g0262111 24.336 452 299 14 61 486 42 476 4.11e-20 93.6
Msa1457100 MtrunA17_Chr5g0445751 29.000 300 191 12 17 307 3 289 5.37e-20 90.9
Msa1457100 MtrunA17_Chr7g0235261 23.601 411 268 16 97 485 94 480 6.76e-20 92.8
Msa1457100 MtrunA17_Chr1g0184421 23.096 394 274 13 142 518 124 505 7.30e-20 92.8
Msa1457100 MtrunA17_Chr2g0307291 23.614 415 281 13 87 484 92 487 8.73e-20 92.4
Msa1457100 MtrunA17_Chr1g0176851 23.176 233 177 1 144 374 2 234 1.08e-19 88.2
Msa1457100 MtrunA17_Chr6g0449341 25.000 464 299 22 79 505 102 553 1.33e-19 92.0
Msa1457100 MtrunA17_Chr1g0174421 26.490 302 201 7 36 322 23 318 1.34e-19 90.1
Msa1457100 MtrunA17_Chr7g0260831 25.120 418 256 20 102 488 82 473 1.99e-19 91.3
Msa1457100 MtrunA17_Chr3g0135841 27.711 249 169 5 266 505 280 526 2.68e-19 91.3
Msa1457100 MtrunA17_Chr2g0293421 24.103 390 260 12 105 485 97 459 2.82e-19 90.9
Msa1457100 MtrunA17_Chr8g0354511 24.500 400 272 14 100 484 109 493 3.22e-19 90.9
Msa1457100 MtrunA17_Chr1g0151221 29.675 246 158 8 283 518 289 529 4.32e-19 90.5
Msa1457100 MtrunA17_Chr3g0128461 24.054 370 241 13 146 494 156 506 5.04e-19 90.1
Msa1457100 MtrunA17_Chr5g0446131 22.837 416 285 14 86 484 87 483 5.50e-19 90.1
Msa1457100 MtrunA17_Chr2g0307301 24.096 415 279 14 87 484 92 487 5.73e-19 90.1
Msa1457100 MtrunA17_Chr8g0339861 28.761 226 144 7 268 485 241 457 1.19e-18 89.0
Msa1457100 MtrunA17_Chr8g0351401 23.873 377 239 13 142 486 120 480 1.72e-18 88.6
Msa1457100 MtrunA17_Chr1g0184461 22.073 521 350 17 27 517 10 504 2.30e-18 88.2
Msa1457100 MtrunA17_Chr6g0479681 29.609 179 108 3 322 484 322 498 2.80e-18 87.8
Msa1457100 MtrunA17_Chr1g0163451 27.727 220 150 5 305 518 309 525 3.43e-18 87.4
Msa1457100 MtrunA17_Chr7g0226771 25.714 245 159 9 256 494 225 452 3.98e-18 87.0
Msa1457100 MtrunA17_Chr8g0362731 30.357 168 113 3 320 486 215 379 4.21e-18 86.7
Msa1457100 MtrunA17_Chr4g0004481 27.928 222 147 6 275 484 241 461 4.87e-18 87.0
Msa1457100 MtrunA17_Chr8g0387001 26.718 262 172 7 269 517 251 505 6.27e-18 86.7
Msa1457100 MtrunA17_Chr4g0076171 30.178 169 89 4 336 497 1 147 1.38e-17 80.5
Msa1457100 MtrunA17_Chr3g0141801 28.897 263 156 10 247 495 220 465 1.48e-17 85.5
Msa1457100 MtrunA17_Chr1g0154731 23.333 300 208 8 194 487 192 475 2.20e-17 85.1
Msa1457100 MtrunA17_Chr1g0163421 27.556 225 144 6 305 518 325 541 2.39e-17 85.1
Msa1457100 MtrunA17_Chr8g0364081 25.954 262 167 9 259 499 266 521 2.86e-17 84.7
Msa1457100 MtrunA17_Chr3g0116721 31.053 190 121 6 164 345 2 189 4.01e-17 79.7
Msa1457100 MtrunA17_Chr8g0372591 28.889 135 92 2 319 453 2 132 4.10e-17 78.2
Msa1457100 MtrunA17_Chr5g0443401 23.507 268 188 7 224 486 194 449 6.03e-17 83.6
Msa1457100 MtrunA17_Chr6g0449381 23.557 433 292 17 79 484 54 474 8.42e-17 83.2
Msa1457100 MtrunA17_Chr8g0354531 22.222 396 279 14 105 486 236 616 1.25e-16 83.2
Msa1457100 MtrunA17_Chr8g0354541 31.507 146 96 3 342 486 7 149 1.45e-16 77.8
Msa1457100 MtrunA17_Chr2g0321171 26.966 267 175 9 257 517 246 498 1.87e-16 82.0
Msa1457100 MtrunA17_Chr4g0014051 28.033 239 153 6 258 484 266 497 2.29e-16 82.0
Msa1457100 MtrunA17_Chr4g0038271 24.818 274 173 8 257 507 287 550 2.34e-16 82.0
Msa1457100 MtrunA17_Chr7g0248991 21.846 325 220 11 134 439 42 351 3.30e-16 80.5
Msa1457100 MtrunA17_Chr1g0164321 22.803 421 268 16 105 484 112 516 3.81e-16 81.3
Msa1457100 MtrunA17_Chr4g0011931 26.906 223 152 5 94 309 64 282 7.08e-16 78.6
Msa1457100 MtrunA17_Chr1g0193811 25.974 231 157 6 275 495 273 499 7.32e-16 80.1
Msa1457100 MtrunA17_Chr1g0163281 23.570 437 304 17 102 517 92 519 2.02e-15 79.0
Msa1457100 MtrunA17_Chr5g0403931 23.935 493 303 19 27 492 11 458 4.32e-15 77.8
Msa1457100 MtrunA17_Chr6g0478161 28.205 195 131 4 298 486 272 463 4.68e-15 77.8
Msa1457100 MtrunA17_Chr4g0030761 29.193 161 83 5 371 518 1 143 6.41e-15 72.0
Msa1457100 MtrunA17_Chr8g0348751 25.843 267 173 10 269 517 251 510 8.87e-15 77.0
Msa1457100 MtrunA17_Chr6g0449351 23.557 433 296 20 76 484 11 432 9.31e-15 76.6
Msa1457100 MtrunA17_Chr1g0163461 26.344 186 130 4 305 484 304 488 1.00e-14 76.6
Msa1457100 MtrunA17_Chr7g0227281 26.695 236 162 7 268 494 240 473 1.01e-14 76.6
Msa1457100 MtrunA17_Chr4g0044851 23.400 453 295 17 50 486 26 442 1.26e-14 76.3
Msa1457100 MtrunA17_Chr2g0308651 27.119 177 124 4 313 486 212 386 1.31e-14 75.9
Msa1457100 MtrunA17_Chr5g0400411 25.806 217 145 6 277 485 252 460 1.45e-14 76.3
Msa1457100 MtrunA17_Chr8g0371761 29.365 126 75 3 339 454 1 122 1.93e-14 70.9
Msa1457100 MtrunA17_Chr1g0163371 27.941 204 138 5 320 517 22 222 2.62e-14 72.4
Msa1457100 MtrunA17_Chr1g0207851 26.754 228 152 4 94 307 72 298 2.97e-14 74.3
Msa1457100 MtrunA17_Chr5g0400421 26.455 189 125 5 303 485 281 461 5.06e-14 74.3
Msa1457100 MtrunA17_Chr6g0472171 31.579 114 75 2 374 486 18 129 6.83e-14 69.3
Msa1457100 MtrunA17_Chr4g0011861 25.229 218 155 6 94 305 64 279 1.42e-13 71.6
Msa1457100 MtrunA17_Chr4g0026941 25.214 234 160 8 257 484 283 507 1.58e-13 73.2
Msa1457100 MtrunA17_Chr1g0178971 26.778 239 152 8 257 484 251 477 4.20e-13 71.6
Msa1457100 MtrunA17_Chr3g0089361 26.923 208 141 6 283 486 249 449 5.79e-13 71.2
Msa1457100 MtrunA17_Chr7g0227291 27.861 201 136 5 324 518 298 495 6.30e-13 70.9
Msa1457100 MtrunA17_Chr1g0153371 22.494 409 280 14 85 485 61 440 6.41e-13 70.9
Msa1457100 MtrunA17_Chr5g0429651 26.577 222 134 8 316 517 296 508 7.36e-13 70.9
Msa1457100 MtrunA17_Chr1g0163211 26.423 246 162 9 249 484 234 470 7.57e-13 70.9
Msa1457100 MtrunA17_Chr7g0219961 22.414 232 165 6 259 486 216 436 1.19e-12 70.1
Msa1457100 MtrunA17_Chr4g0044841 20.852 446 315 13 50 486 27 443 1.41e-12 69.7
Msa1457100 MtrunA17_Chr3g0104351 23.592 284 170 9 273 517 241 516 1.49e-12 70.1
Msa1457100 MtrunA17_Chr1g0171041 28.824 170 111 6 324 485 310 477 3.19e-12 68.9
Msa1457100 MtrunA17_Chr3g0078411 24.365 197 140 4 294 486 246 437 3.73e-12 68.6
Msa1457100 MtrunA17_Chr1g0204241 34.375 128 77 5 363 485 143 268 3.75e-12 67.4
Msa1457100 MtrunA17_Chr3g0107501 25.794 252 165 9 256 500 222 458 3.77e-12 68.6
Msa1457100 MtrunA17_Chr1g0163401 24.016 254 173 8 249 484 230 481 7.87e-12 67.8
Msa1457100 MtrunA17_Chr8g0380501 24.701 251 178 6 276 518 245 492 1.50e-11 66.6
Msa1457100 MtrunA17_Chr6g0455461 24.064 187 134 3 303 486 256 437 2.10e-11 66.2
Msa1457100 MtrunA17_Chr4g0067191 21.491 456 288 14 101 504 67 504 3.75e-11 65.5
Msa1457100 MtrunA17_Chr1g0183611 26.519 181 126 5 320 494 225 404 7.54e-11 64.3
Msa1457100 MtrunA17_Chr1g0163391 23.577 246 174 8 249 484 230 471 8.43e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1457100 AT1G13710.1 65.267 524 165 8 1 518 1 513 0.0 670
Msa1457100 AT1G74110.1 62.333 523 171 8 18 517 17 536 0.0 632
Msa1457100 AT3G61880.1 52.546 491 219 5 37 517 43 529 1.40e-176 508
Msa1457100 AT3G61880.2 52.546 491 219 5 37 517 43 529 3.10e-176 508
Msa1457100 AT2G46660.1 50.487 513 229 7 24 517 22 528 2.41e-171 494
Msa1457100 AT1G01190.1 46.654 523 250 7 14 517 19 531 2.92e-164 476
Msa1457100 AT1G01190.2 46.654 523 250 7 14 517 24 536 6.00e-164 476
Msa1457100 AT5G09970.1 50.495 505 229 8 31 515 30 533 1.30e-162 472
Msa1457100 AT5G07990.1 32.311 489 301 13 50 517 23 502 9.61e-81 261
Msa1457100 AT2G40890.1 32.979 470 298 8 62 517 29 495 1.05e-80 261
Msa1457100 AT3G61040.1 33.544 474 281 13 62 516 35 493 6.78e-76 248
Msa1457100 AT4G31940.1 31.048 525 315 14 27 517 6 517 3.31e-74 244
Msa1457100 AT4G31970.1 31.298 524 314 14 27 517 6 516 3.03e-72 239
Msa1457100 AT2G45570.1 33.114 456 280 11 73 510 53 501 1.16e-71 237
Msa1457100 AT2G45550.1 33.115 459 276 13 48 486 26 473 1.29e-71 237
Msa1457100 AT3G48300.1 32.883 444 267 12 62 491 31 457 3.25e-71 235
Msa1457100 AT3G48300.2 32.883 444 267 12 62 491 33 459 3.42e-71 235
Msa1457100 AT5G25120.1 31.200 500 302 14 33 510 7 486 6.91e-71 234
Msa1457100 AT3G48310.1 31.352 488 294 17 52 518 23 490 8.80e-71 234
Msa1457100 AT5G25140.1 31.818 484 281 16 55 510 24 486 1.36e-70 234
Msa1457100 AT5G57260.1 31.685 445 274 10 62 486 32 466 1.31e-69 231
Msa1457100 AT3G26280.1 31.601 481 297 14 52 510 24 494 2.65e-69 231
Msa1457100 AT3G26280.2 31.535 482 298 14 51 510 40 511 3.41e-69 231
Msa1457100 AT3G48270.1 31.066 441 277 12 58 486 29 454 4.75e-69 229
Msa1457100 AT2G45560.1 32.207 503 305 15 28 510 14 500 4.60e-68 228
Msa1457100 AT5G06900.1 35.269 465 274 13 62 512 36 487 7.14e-68 227
Msa1457100 AT5G25180.1 29.920 498 312 14 37 510 2 486 1.12e-67 226
Msa1457100 AT5G25130.1 30.642 483 286 13 56 510 25 486 8.42e-67 224
Msa1457100 AT4G36220.1 31.207 439 267 10 72 486 54 481 1.31e-66 224
Msa1457100 AT2G24180.1 31.144 472 296 12 56 510 32 491 1.73e-66 223
Msa1457100 AT3G48290.1 31.236 461 281 14 49 492 21 462 3.03e-66 222
Msa1457100 AT4G31500.1 29.448 489 313 14 46 511 13 492 4.27e-66 222
Msa1457100 AT4G31950.1 31.286 521 305 14 28 517 7 505 6.67e-66 222
Msa1457100 AT3G26300.1 30.675 489 299 13 48 511 18 491 1.63e-65 221
Msa1457100 AT1G01280.1 31.466 464 288 13 75 517 49 503 2.70e-65 220
Msa1457100 AT1G33720.1 29.333 525 323 17 12 512 2 502 5.62e-65 219
Msa1457100 AT3G25180.1 30.720 472 312 8 59 517 37 506 9.06e-65 219
Msa1457100 AT3G26310.1 29.774 487 305 13 48 511 18 490 2.75e-64 217
Msa1457100 AT1G74550.1 30.952 462 295 8 59 510 26 473 6.25e-64 216
Msa1457100 AT3G26210.1 30.516 426 269 12 78 486 51 466 1.17e-63 216
Msa1457100 AT3G48280.1 30.512 449 288 11 49 486 19 454 1.23e-63 215
Msa1457100 AT4G13310.1 30.310 419 273 10 79 486 53 463 2.08e-63 215
Msa1457100 AT4G37400.1 31.416 452 283 12 79 516 52 490 2.10e-63 215
Msa1457100 AT4G37340.1 30.963 436 267 12 79 498 52 469 2.14e-63 215
Msa1457100 AT3G26230.1 30.297 505 298 18 45 516 11 494 2.85e-63 214
Msa1457100 AT2G45580.1 30.065 459 293 11 75 514 55 504 2.96e-63 215
Msa1457100 AT3G48290.2 30.579 484 280 15 49 492 21 488 4.67e-63 214
Msa1457100 AT3G26320.1 30.185 487 303 12 48 511 19 491 5.24e-63 214
Msa1457100 AT4G12300.1 30.682 528 321 15 9 517 7 508 5.42e-63 214
Msa1457100 AT3G26270.1 30.818 477 305 15 52 510 24 493 7.72e-63 213
Msa1457100 AT3G48320.1 31.250 464 281 15 50 495 21 464 8.23e-63 213
Msa1457100 AT5G67310.1 31.111 495 314 15 36 516 19 500 9.71e-63 213
Msa1457100 AT3G26330.1 30.353 481 292 13 62 517 33 495 9.80e-63 213
Msa1457100 AT1G66540.1 30.848 389 246 7 140 518 1 376 1.03e-62 210
Msa1457100 AT4G12320.1 29.746 511 320 14 31 517 15 510 2.00e-62 213
Msa1457100 AT4G13770.1 29.039 489 323 14 45 516 15 496 2.70e-62 212
Msa1457100 AT1G13080.1 30.000 510 325 14 27 517 5 501 4.28e-62 211
Msa1457100 AT4G37430.1 29.474 475 304 13 62 517 30 492 1.80e-61 210
Msa1457100 AT4G12310.1 30.501 459 288 11 79 517 65 512 4.68e-61 209
Msa1457100 AT5G04330.1 29.668 482 310 15 58 518 30 503 7.90e-61 208
Msa1457100 AT5G24950.1 30.476 420 272 11 78 486 52 462 8.79e-61 208
Msa1457100 AT4G37370.1 30.042 476 292 15 62 516 32 487 1.15e-60 207
Msa1457100 AT1G13110.1 29.331 508 319 17 27 510 5 496 1.36e-60 207
Msa1457100 AT2G30770.1 30.444 450 287 13 78 512 53 491 8.33e-60 205
Msa1457100 AT4G22710.1 30.575 435 286 7 94 517 88 517 1.28e-59 206
Msa1457100 AT4G22690.1 30.575 435 286 7 94 517 119 548 1.89e-59 206
Msa1457100 AT3G26160.1 32.391 460 272 13 52 486 22 467 1.92e-59 204
Msa1457100 AT5G44620.1 32.444 450 288 9 79 517 67 511 2.13e-59 205
Msa1457100 AT4G13290.1 30.120 415 271 11 79 486 54 456 3.19e-59 204
Msa1457100 AT3G26170.1 30.934 514 310 17 27 516 6 498 5.65e-59 203
Msa1457100 AT4G37360.1 30.045 446 282 11 79 510 52 481 6.13e-59 203
Msa1457100 AT5G35715.1 30.093 432 283 10 95 510 1 429 7.95e-59 201
Msa1457100 AT1G33720.4 31.926 379 230 9 152 512 2 370 9.05e-59 199
Msa1457100 AT1G33720.3 31.926 379 230 9 152 512 2 370 9.05e-59 199
Msa1457100 AT1G33720.5 31.926 379 230 9 152 512 2 370 9.05e-59 199
Msa1457100 AT3G28740.1 30.603 464 268 14 80 516 62 498 1.47e-58 202
Msa1457100 AT4G37310.1 29.759 457 292 12 80 517 54 500 1.87e-58 202
Msa1457100 AT1G33730.1 32.440 373 224 11 158 512 4 366 2.22e-58 198
Msa1457100 AT1G33730.2 32.440 373 224 11 158 512 4 366 2.22e-58 198
Msa1457100 AT2G42250.1 28.983 521 329 14 21 515 3 508 5.02e-57 198
Msa1457100 AT3G26190.1 31.263 483 301 16 50 510 18 491 5.56e-57 198
Msa1457100 AT2G23190.1 28.458 506 323 15 29 516 49 533 5.98e-57 199
Msa1457100 AT2G25160.1 30.385 441 282 11 99 517 75 512 7.86e-57 198
Msa1457100 AT3G26180.1 30.171 527 313 18 14 516 3 498 9.53e-57 197
Msa1457100 AT2G23220.1 30.184 434 269 13 97 516 92 505 1.37e-56 197
Msa1457100 AT4G12330.1 31.111 450 293 9 79 517 67 510 1.39e-56 197
Msa1457100 AT1G74540.1 30.258 466 299 9 59 510 26 479 1.88e-56 196
Msa1457100 AT1G64940.1 33.953 430 241 16 116 517 94 508 2.27e-56 196
Msa1457100 AT3G26290.1 30.595 487 301 11 48 511 19 491 2.79e-56 196
Msa1457100 AT4G37320.1 28.373 504 313 17 33 513 8 486 3.22e-56 196
Msa1457100 AT3G26290.2 30.595 487 301 11 48 511 32 504 6.91e-56 195
Msa1457100 AT5G57220.1 28.661 478 301 14 45 504 15 470 8.50e-56 194
Msa1457100 AT3G26150.1 30.426 516 314 17 25 516 4 498 1.10e-55 194
Msa1457100 AT5G24960.1 30.498 482 302 15 51 512 24 492 4.22e-55 193
Msa1457100 AT5G36220.1 29.861 432 264 12 104 516 84 495 4.72e-55 193
Msa1457100 AT2G30750.1 30.608 477 305 13 52 512 25 491 5.29e-55 192
Msa1457100 AT2G45580.2 34.043 329 197 7 199 514 29 350 8.76e-55 188
Msa1457100 AT3G53300.1 30.753 478 304 16 58 516 26 495 8.77e-55 192
Msa1457100 AT1G11610.1 31.180 449 285 12 78 512 53 491 1.07e-54 192
Msa1457100 AT4G37330.1 30.238 463 300 14 62 513 33 483 1.44e-54 191
Msa1457100 AT1G13090.2 28.475 446 286 14 62 486 30 463 2.02e-54 191
Msa1457100 AT4G39950.1 28.872 523 342 15 12 511 10 525 3.09e-54 191
Msa1457100 AT4G37410.1 27.926 487 325 14 45 516 15 490 4.24e-54 190
Msa1457100 AT1G33720.2 30.198 404 229 10 152 512 2 395 4.48e-54 187
Msa1457100 AT4G39950.2 28.872 523 342 15 12 511 50 565 7.32e-54 191
Msa1457100 AT1G11610.2 30.396 454 290 12 78 517 53 494 3.74e-53 187
Msa1457100 AT2G14100.1 28.952 525 324 17 14 517 11 507 5.90e-53 187
Msa1457100 AT3G10560.1 28.814 531 325 20 16 517 6 512 1.70e-52 186
Msa1457100 AT2G02580.1 30.000 510 313 15 26 511 2 491 2.06e-52 186
Msa1457100 AT5G10600.1 26.824 425 297 8 100 516 87 505 2.84e-52 186
Msa1457100 AT3G44250.1 30.361 471 298 12 62 511 30 491 3.59e-52 185
Msa1457100 AT3G26200.1 29.106 481 310 14 52 510 20 491 3.86e-52 185
Msa1457100 AT4G20240.1 30.597 402 257 11 49 438 22 413 3.16e-51 181
Msa1457100 AT1G64950.1 32.701 422 257 12 116 517 93 507 3.27e-51 182
Msa1457100 AT3G53280.1 30.769 442 280 13 62 486 30 462 4.20e-51 182
Msa1457100 AT3G26220.1 29.084 502 325 16 31 510 1 493 6.99e-51 181
Msa1457100 AT2G22330.1 27.500 520 327 16 20 511 30 527 7.58e-51 182
Msa1457100 AT2G22330.2 27.500 520 327 16 20 511 53 550 9.49e-51 182
Msa1457100 AT1G50520.1 29.680 438 286 12 94 517 81 510 1.18e-50 181
Msa1457100 AT3G20090.2 30.983 468 292 15 69 518 56 510 1.34e-50 181
Msa1457100 AT1G13100.1 28.873 426 261 16 88 486 53 463 1.40e-50 180
Msa1457100 AT1G64930.1 33.255 424 253 14 116 517 93 508 1.49e-50 181
Msa1457100 AT1G66540.2 30.745 322 203 6 204 518 9 317 2.09e-50 176
Msa1457100 AT5G42590.1 29.464 448 294 11 78 511 52 491 7.15e-50 179
Msa1457100 AT5G04660.1 28.008 532 339 18 9 517 1 511 2.95e-49 177
Msa1457100 AT3G52970.1 29.498 478 305 16 62 516 42 510 1.55e-48 176
Msa1457100 AT3G32047.1 30.233 430 263 13 105 512 88 502 1.68e-48 175
Msa1457100 AT1G11600.1 30.392 510 326 11 33 518 6 510 2.17e-48 175
Msa1457100 AT2G12190.1 30.303 495 307 16 52 517 24 509 2.25e-48 175
Msa1457100 AT1G13080.2 33.660 306 189 6 223 517 81 383 3.37e-48 171
Msa1457100 AT3G10570.1 28.604 444 286 14 94 517 80 512 8.32e-48 173
Msa1457100 AT3G20140.1 29.237 472 294 16 68 518 53 505 1.14e-47 173
Msa1457100 AT1G64900.1 32.692 416 262 11 116 517 92 503 1.44e-47 172
Msa1457100 AT3G20120.4 30.250 400 253 9 134 518 119 507 2.48e-47 172
Msa1457100 AT4G15350.1 30.392 408 258 11 126 518 107 503 2.99e-47 172
Msa1457100 AT3G61040.2 32.143 364 224 10 62 412 35 388 4.26e-47 169
Msa1457100 AT5G05260.2 28.455 492 310 14 59 517 39 521 5.73e-47 171
Msa1457100 AT3G52970.2 28.310 491 308 16 62 516 42 524 7.20e-47 171
Msa1457100 AT5G10610.1 26.200 500 339 11 29 516 8 489 9.23e-47 170
Msa1457100 AT4G15360.1 28.770 504 325 13 29 512 11 500 1.32e-46 170
Msa1457100 AT5G06905.1 28.450 471 293 12 53 491 24 482 1.39e-46 170
Msa1457100 AT5G04630.1 27.640 445 290 13 94 517 75 508 2.94e-46 169
Msa1457100 AT3G20950.1 27.547 530 331 18 20 518 6 513 8.55e-46 168
Msa1457100 AT2G30490.1 28.132 423 286 12 79 488 55 472 1.56e-45 167
Msa1457100 AT3G20940.1 27.607 489 320 15 52 518 34 510 3.36e-45 166
Msa1457100 AT1G50560.1 29.556 450 272 14 94 517 81 511 5.94e-45 166
Msa1457100 AT3G20960.1 29.639 388 256 9 142 518 24 405 3.64e-44 161
Msa1457100 AT3G20090.1 30.423 378 246 9 152 518 1 372 7.66e-44 160
Msa1457100 AT3G20080.2 27.342 395 273 7 135 518 119 510 7.93e-44 162
Msa1457100 AT3G20080.1 27.342 395 273 7 135 518 119 510 7.93e-44 162
Msa1457100 AT4G20240.2 30.343 379 243 10 49 416 22 390 1.82e-43 159
Msa1457100 AT4G15330.1 27.198 489 329 11 45 516 23 501 1.83e-43 161
Msa1457100 AT3G20960.2 29.639 388 256 9 142 518 127 508 1.89e-43 161
Msa1457100 AT5G61320.1 29.880 415 259 10 116 517 92 487 5.64e-43 160
Msa1457100 AT3G26830.1 26.526 475 310 17 36 486 4 463 7.90e-43 159
Msa1457100 AT5G36220.2 31.325 332 205 8 194 516 32 349 8.26e-43 156
Msa1457100 AT2G27000.1 28.298 470 284 14 79 518 61 507 1.08e-42 159
Msa1457100 AT3G20120.2 29.843 382 242 9 152 518 1 371 1.86e-42 155
Msa1457100 AT3G20120.3 29.843 382 242 9 152 518 1 371 1.86e-42 155
Msa1457100 AT3G20120.1 29.843 382 242 9 152 518 1 371 1.86e-42 155
Msa1457100 AT4G15330.2 28.421 380 263 6 143 516 97 473 2.08e-42 158
Msa1457100 AT3G20100.1 30.144 418 256 14 120 517 107 508 3.82e-42 158
Msa1457100 AT3G20110.1 25.962 520 340 13 21 518 2 498 4.54e-42 157
Msa1457100 AT5G05260.1 27.607 489 286 14 59 517 39 489 8.50e-42 156
Msa1457100 AT1G16400.1 24.528 530 359 14 21 517 5 526 2.75e-41 156
Msa1457100 AT5G47990.1 25.576 434 290 9 105 518 88 508 4.38e-41 155
Msa1457100 AT3G20130.1 27.313 454 306 12 79 517 64 508 8.26e-41 154
Msa1457100 AT1G16410.1 25.047 531 347 14 23 517 12 527 1.74e-40 154
Msa1457100 AT5G42580.1 27.225 382 257 6 143 517 126 493 2.00e-40 153
Msa1457100 AT1G58260.1 26.124 467 306 15 79 517 64 519 2.91e-40 153
Msa1457100 AT3G20130.2 27.907 387 260 9 143 517 101 480 3.73e-40 152
Msa1457100 AT3G03470.1 28.822 399 245 12 145 517 124 509 3.97e-39 149
Msa1457100 AT3G20080.4 31.343 268 173 5 259 518 109 373 5.07e-39 146
Msa1457100 AT3G20080.5 31.343 268 173 5 259 518 109 373 5.07e-39 146
Msa1457100 AT3G20080.6 31.343 268 173 5 259 518 109 373 5.07e-39 146
Msa1457100 AT3G20080.3 31.343 268 173 5 259 518 109 373 5.07e-39 146
Msa1457100 AT3G20935.1 30.693 303 175 8 246 518 38 335 6.42e-39 145
Msa1457100 AT4G13310.2 28.198 344 229 9 79 412 53 388 6.57e-39 146
Msa1457100 AT2G27010.1 30.488 328 204 8 206 518 167 485 2.00e-38 147
Msa1457100 AT1G28430.1 27.387 398 249 12 143 517 127 507 1.45e-37 145
Msa1457100 AT4G15380.1 25.316 395 258 10 143 518 129 505 1.88e-37 145
Msa1457100 AT1G79370.1 25.205 488 328 13 64 517 48 532 4.22e-37 144
Msa1457100 AT3G26180.2 33.977 259 153 8 269 516 113 364 1.24e-35 137
Msa1457100 AT2G45580.3 27.195 353 235 9 75 412 55 400 2.26e-33 131
Msa1457100 AT3G25180.2 27.826 345 235 7 59 390 37 380 1.37e-32 129
Msa1457100 AT3G53290.1 28.718 390 241 10 138 516 39 402 1.68e-32 129
Msa1457100 AT5G25900.1 22.881 472 340 12 60 517 46 507 7.35e-31 125
Msa1457100 AT5G24960.2 27.746 346 222 12 51 380 24 357 1.34e-30 123
Msa1457100 AT2G05180.1 27.796 313 197 7 143 440 128 426 2.32e-30 123
Msa1457100 AT2G25160.2 28.107 338 220 10 98 415 74 408 7.97e-30 122
Msa1457100 AT2G45510.1 26.879 439 286 16 105 518 81 509 4.57e-28 117
Msa1457100 AT4G27710.1 25.721 416 277 13 97 495 100 500 1.48e-25 110
Msa1457100 AT3G14620.1 26.478 423 285 16 73 484 77 484 2.05e-25 110
Msa1457100 AT2G26710.1 26.582 395 266 11 100 484 104 484 9.82e-25 108
Msa1457100 AT2G44890.1 26.817 399 262 14 142 518 119 509 1.19e-24 107
Msa1457100 AT1G75130.1 25.000 476 315 16 47 494 24 485 2.80e-24 106
Msa1457100 AT5G35917.1 23.469 490 296 15 59 517 41 482 2.35e-23 103
Msa1457100 AT5G52400.1 27.632 228 156 5 261 485 268 489 7.12e-23 102
Msa1457100 AT1G16410.2 23.022 417 277 11 23 409 12 414 1.15e-22 100
Msa1457100 AT2G44890.2 25.858 437 275 17 105 518 81 491 7.65e-22 99.0
Msa1457100 AT3G14640.1 25.258 388 264 12 109 484 110 483 1.10e-21 98.6
Msa1457100 AT3G14640.2 25.258 388 264 12 109 484 132 505 1.11e-21 99.0
Msa1457100 AT3G14690.2 24.611 386 267 12 109 484 145 516 2.42e-21 97.8
Msa1457100 AT3G14690.1 24.611 386 267 12 109 484 110 481 2.48e-21 97.8
Msa1457100 AT2G46950.1 28.700 223 149 4 268 485 323 540 3.44e-21 97.4
Msa1457100 AT5G24910.1 23.349 424 285 13 96 494 106 514 6.79e-21 96.3
Msa1457100 AT3G26125.1 22.330 412 276 12 142 518 131 533 1.01e-20 95.9
Msa1457100 AT3G14630.2 27.755 245 159 8 246 484 300 532 1.02e-20 95.9
Msa1457100 AT3G14630.1 27.755 245 159 8 246 484 245 477 1.03e-20 95.9
Msa1457100 AT2G27690.1 24.691 405 262 19 105 485 76 461 1.40e-20 95.1
Msa1457100 AT2G46960.2 24.201 438 293 14 80 495 80 500 1.69e-20 95.1
Msa1457100 AT3G14610.1 24.372 398 274 11 99 484 99 481 5.58e-20 93.6
Msa1457100 AT2G26170.2 30.973 226 147 5 266 484 182 405 9.47e-20 92.4
Msa1457100 AT1G24540.1 23.472 409 275 14 105 484 90 489 1.04e-19 92.8
Msa1457100 AT2G26170.1 30.973 226 147 5 266 484 265 488 1.21e-19 92.4
Msa1457100 AT3G14680.1 24.402 418 290 14 78 486 83 483 1.30e-19 92.4
Msa1457100 AT2G46960.1 25.417 240 172 3 261 495 147 384 1.51e-19 91.3
Msa1457100 AT1G13140.1 23.720 371 247 11 142 484 131 493 2.57e-19 91.7
Msa1457100 AT5G24900.1 23.371 445 299 17 94 515 100 525 6.21e-19 90.5
Msa1457100 AT3G14650.1 24.791 359 247 12 139 486 137 483 8.47e-19 89.7
Msa1457100 AT1G31800.1 22.296 453 307 14 94 516 142 579 9.57e-19 90.1
Msa1457100 AT5G38450.1 24.468 376 231 11 146 494 149 498 1.03e-18 89.7
Msa1457100 AT3G53130.1 24.818 411 280 13 97 488 114 514 1.55e-18 89.0
Msa1457100 AT5G08250.2 25.000 280 190 7 257 518 264 541 4.52e-18 87.8
Msa1457100 AT5G23190.1 24.825 286 195 8 249 518 260 541 4.97e-18 87.8
Msa1457100 AT5G08250.1 25.000 280 190 7 257 518 202 479 8.43e-18 86.7
Msa1457100 AT5G24900.2 29.648 199 126 6 322 515 219 408 9.75e-18 85.9
Msa1457100 AT3G14660.1 22.376 362 252 10 139 486 137 483 2.06e-17 85.5
Msa1457100 AT4G15110.1 23.899 477 301 18 94 518 113 579 2.51e-17 85.5
Msa1457100 AT3G53305.1 39.167 120 67 2 367 486 184 297 2.76e-17 83.6
Msa1457100 AT3G14660.2 22.997 287 195 8 211 486 66 337 4.27e-17 83.6
Msa1457100 AT1G63710.1 21.891 402 277 14 106 481 83 473 7.02e-17 84.0
Msa1457100 AT5G35920.1 33.108 148 86 4 377 517 6 147 1.48e-16 77.4
Msa1457100 AT4G00360.1 23.025 443 296 18 106 517 83 511 2.54e-16 82.4
Msa1457100 AT1G67110.1 25.189 397 272 12 108 494 111 492 2.69e-16 82.0
Msa1457100 AT2G29090.2 24.041 391 257 13 105 486 95 454 4.43e-16 81.3
Msa1457100 AT2G29090.1 24.041 391 257 13 105 486 95 454 4.43e-16 81.3
Msa1457100 AT2G29090.3 24.227 388 254 13 108 486 3 359 6.00e-16 80.1
Msa1457100 AT2G45560.2 27.243 301 191 12 28 313 14 301 5.29e-15 76.6
Msa1457100 AT1G13150.1 24.113 282 188 7 257 518 243 518 9.57e-15 77.4
Msa1457100 AT3G19270.2 23.000 400 249 14 105 486 80 438 1.53e-14 76.3
Msa1457100 AT5G05690.1 25.907 193 137 3 302 491 257 446 3.11e-14 75.5
Msa1457100 AT1G13140.2 22.039 363 237 9 142 484 131 467 3.13e-14 75.5
Msa1457100 AT3G56630.1 21.951 410 280 19 100 484 72 466 3.95e-14 75.1
Msa1457100 AT1G19630.1 26.482 253 167 8 247 493 214 453 4.11e-14 75.1
Msa1457100 AT3G19270.1 22.943 401 250 14 105 487 80 439 4.44e-14 74.7
Msa1457100 AT5G05690.3 26.316 190 134 3 302 488 138 324 5.29e-14 73.9
Msa1457100 AT1G73340.1 23.140 242 167 7 260 496 236 463 7.23e-14 74.3
Msa1457100 AT2G32440.2 22.938 388 267 12 105 485 96 458 8.45e-14 74.3
Msa1457100 AT2G32440.1 22.938 388 267 12 105 485 96 458 8.45e-14 74.3
Msa1457100 AT3G13730.1 21.975 405 279 11 102 496 98 475 8.88e-14 73.9
Msa1457100 AT1G57750.2 25.359 209 140 7 249 449 229 429 1.30e-13 73.2
Msa1457100 AT1G13090.1 25.379 264 172 12 62 311 30 282 2.78e-13 71.2
Msa1457100 AT5G02900.1 23.770 244 169 7 257 484 205 447 1.04e-12 70.9
Msa1457100 AT1G19630.3 26.316 247 163 8 247 487 214 447 2.44e-12 69.3
Msa1457100 AT5G36110.1 25.207 242 161 6 253 486 218 447 5.67e-12 68.6
Msa1457100 AT1G11680.1 25.714 245 167 7 249 485 218 455 6.71e-12 68.2
Msa1457100 AT1G47620.1 25.301 166 119 4 324 485 321 485 6.81e-12 68.2
Msa1457100 AT5G58860.1 23.944 213 145 6 319 517 299 508 3.85e-11 65.9
Msa1457100 AT3G13730.2 23.507 268 186 8 224 485 210 464 9.62e-11 64.3

Find 157 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTTCTCTCTGTTCT+TGG 0.127656 tig0038452:+5892 Msa1457100:CDS
AGAATCTCTTTAGCAGTTTC+TGG 0.158283 tig0038452:-6138 Msa1457100:intergenic
TGATGATTCACCTGTTAATT+TGG 0.166587 tig0038452:+7376 Msa1457100:CDS
TTTGGGTTGGTTAGATTTGC+AGG 0.215953 tig0038452:+6557 Msa1457100:CDS
CTGATATGATTGCAGTTCTT+TGG 0.226158 tig0038452:+6742 Msa1457100:CDS
GTTTGGCTTCTGTTCATCTT+TGG 0.246994 tig0038452:+7315 Msa1457100:CDS
ATAAGGAAGGTTGGGTAGTT+TGG 0.249179 tig0038452:-5763 Msa1457100:intergenic
TTACACCAGGTGGGCTTGCT+TGG 0.255572 tig0038452:+5929 Msa1457100:CDS
TTTGGTTTCTTTGCTTTGTT+TGG 0.269088 tig0038452:+7536 Msa1457100:three_prime_UTR
CTCTCTGGCTTAAACTCTTC+TGG 0.282117 tig0038452:-7200 Msa1457100:intergenic
ATTCTTTGTAGTTCTGCTTT+TGG 0.287687 tig0038452:+6156 Msa1457100:CDS
GCATTGTGAAAGAGGCATTA+AGG 0.287804 tig0038452:+7036 Msa1457100:CDS
AAAAGAAGAAGATGAAATTC+TGG 0.303961 tig0038452:-5817 Msa1457100:intergenic
TACACCAGGTGGGCTTGCTT+GGG 0.314029 tig0038452:+5930 Msa1457100:CDS
GGTTAGATTTGCAGGGTGTT+AGG 0.316135 tig0038452:+6565 Msa1457100:CDS
GGAATGTCTTAAGCTTTCTA+TGG 0.320560 tig0038452:+7400 Msa1457100:CDS
ATTATGTAGATGTTTGGTTT+TGG 0.327589 tig0038452:+7709 Msa1457100:three_prime_UTR
AGACATTCCTCCAAATTAAC+AGG 0.336363 tig0038452:-7386 Msa1457100:intergenic
TCCTGGAAAAGCTATGGGTT+TGG 0.345281 tig0038452:+7298 Msa1457100:CDS
AGTTACTTCACAACTTCAAA+TGG 0.346989 tig0038452:+7345 Msa1457100:CDS
GACATGGATATTGTGGGGTT+TGG 0.349660 tig0038452:+7518 Msa1457100:three_prime_UTR
TGATATGATTGCAGTTCTTT+GGG 0.349760 tig0038452:+6743 Msa1457100:CDS
GGTATTGCTAAGTAGGGTTA+TGG 0.353964 tig0038452:+7565 Msa1457100:three_prime_UTR
GAAGAAATTTACCGTGTTGT+TGG 0.362445 tig0038452:+6960 Msa1457100:CDS
TCAGCCAAGTCTGTTATTCC+AGG 0.366836 tig0038452:+5976 Msa1457100:CDS
CTTTGCTTTGTTTGGCAAAA+GGG 0.368212 tig0038452:+7544 Msa1457100:three_prime_UTR
GGATGAAAGTAAACAAGGTC+TGG 0.368901 tig0038452:-5841 Msa1457100:intergenic
GAGTGAGGTTGGTTTGAAAA+TGG 0.370170 tig0038452:+6329 Msa1457100:CDS
ACCATAGCAGTTGTACCTTT+CGG 0.377136 tig0038452:-7134 Msa1457100:intergenic
GATTTGAGGTTGGCACCATT+TGG 0.379474 tig0038452:+7257 Msa1457100:CDS
AAATGTTATGATTTCTTTGA+TGG 0.380115 tig0038452:+6453 Msa1457100:CDS
TCTTTGCTTTGTTTGGCAAA+AGG 0.381521 tig0038452:+7543 Msa1457100:three_prime_UTR
ACGGTGACTCTTGGCTAGTT+TGG 0.385532 tig0038452:-6058 Msa1457100:intergenic
AAGTAGGGTTATGGTTTCAT+AGG 0.387177 tig0038452:+7574 Msa1457100:three_prime_UTR
GGTTTGTTTGGTATTCTCTC+AGG 0.388733 tig0038452:+6012 Msa1457100:CDS
TTGCTAATTATGTAGATGTT+TGG 0.390960 tig0038452:+7703 Msa1457100:three_prime_UTR
GAAAGAAGCAAAGTGCAGTT+TGG 0.394884 tig0038452:-5879 Msa1457100:intergenic
TTTAGTAGTTAAGTGGGTGT+TGG 0.395443 tig0038452:+7657 Msa1457100:three_prime_UTR
GCAAAAGGGTATTGCTAAGT+AGG 0.399335 tig0038452:+7558 Msa1457100:three_prime_UTR
GAGAGTACTGGAGGAATTTG+AGG 0.399841 tig0038452:+6247 Msa1457100:CDS
GAATGAGGATGTGAGTATAA+TGG 0.405030 tig0038452:+7229 Msa1457100:CDS
TTTAGCTGTTCATGATGTTA+TGG 0.408671 tig0038452:+7094 Msa1457100:CDS
ATAGAGAGAGTGAGAGAAAG+AGG 0.410503 tig0038452:-5735 Msa1457100:intergenic
CACCATCTCATCATGTGTTA+TGG 0.413116 tig0038452:-7168 Msa1457100:intergenic
CTTGCAATGCATTGTGAAAG+AGG 0.413621 tig0038452:+7028 Msa1457100:CDS
TTAGTAGTTAAGTGGGTGTT+GGG 0.427744 tig0038452:+7658 Msa1457100:three_prime_UTR
CATTGTGAAAGAGGCATTAA+GGG 0.428615 tig0038452:+7037 Msa1457100:CDS
AATATTACTAGAATGGATTC+TGG 0.429316 tig0038452:+6896 Msa1457100:CDS
CTTTACTTGTATGAGAAAGT+TGG 0.433454 tig0038452:+7496 Msa1457100:three_prime_UTR
GTTCACTTGAAATAATGAAC+CGG 0.434204 tig0038452:-6116 Msa1457100:intergenic
TTAGCTTAGCCCTAGGTCCT+TGG 0.439516 tig0038452:-7455 Msa1457100:intergenic
GCAATGGGGTTTGCTCCATA+TGG 0.440904 tig0038452:+6225 Msa1457100:CDS
AATGAGGATGTGAGTATAAT+GGG 0.445131 tig0038452:+7230 Msa1457100:CDS
CACCATTTGGAGCTGGTAGG+AGG 0.448057 tig0038452:+7270 Msa1457100:CDS
ATTTGCAGGGTGTTAGGAAA+AGG 0.454716 tig0038452:+6571 Msa1457100:CDS
TTCCTCCAGTACTCTCCATA+TGG 0.455945 tig0038452:-6240 Msa1457100:intergenic
CGACTCAGCACGGTGACTCT+TGG 0.456143 tig0038452:-6067 Msa1457100:intergenic
AATACCAAACAAACCAGAAA+AGG 0.457994 tig0038452:-6004 Msa1457100:intergenic
TCACCGTGCTGAGTCGTTGA+TGG 0.460513 tig0038452:+6074 Msa1457100:CDS
AGGAGGATTAACGGGTTTGA+AGG 0.463080 tig0038452:+6300 Msa1457100:CDS
TAGGAAAAGGTGTAGAGCTT+TGG 0.465846 tig0038452:+6584 Msa1457100:CDS
TGGTGTTGAGCTTGAGGAGT+TGG 0.466004 tig0038452:+6479 Msa1457100:CDS
AATGTGATGATGACTGTGTT+TGG 0.466795 tig0038452:+6429 Msa1457100:CDS
GTTACTTCACAACTTCAAAT+GGG 0.466980 tig0038452:+7346 Msa1457100:CDS
GATGAGAAATAAGGAAGGTT+GGG 0.468477 tig0038452:-5771 Msa1457100:intergenic
TTAACAGGTGAATCATCATA+TGG 0.469894 tig0038452:-7371 Msa1457100:intergenic
AGATGAGAAATAAGGAAGGT+TGG 0.471190 tig0038452:-5772 Msa1457100:intergenic
ACTTAACTACTAAACCTAAA+CGG 0.472464 tig0038452:-7648 Msa1457100:intergenic
TATGATTTCTTTGATGGTGA+TGG 0.474505 tig0038452:+6459 Msa1457100:CDS
GCCAGAGAGGTTTATGAATG+AGG 0.478894 tig0038452:+7214 Msa1457100:CDS
GAGTGAAGGGTATGAGCTGT+TGG 0.478911 tig0038452:+6503 Msa1457100:CDS
ATGTGATGATGACTGTGTTT+GGG 0.484027 tig0038452:+6430 Msa1457100:CDS
AATTAGATTCTAAATAGAAA+AGG 0.484711 tig0038452:-7597 Msa1457100:intergenic
TCCTCATTCATAAACCTCTC+TGG 0.487038 tig0038452:-7215 Msa1457100:intergenic
GGTTTGTCCTGGAAAAGCTA+TGG 0.488277 tig0038452:+7292 Msa1457100:CDS
TGATTCACCTGTTAATTTGG+AGG 0.490128 tig0038452:+7379 Msa1457100:CDS
TAGAGAGAGTGAGAGAAAGA+GGG 0.491478 tig0038452:-5734 Msa1457100:intergenic
TTGAGGAGTTGGTGAGTGAA+GGG 0.495172 tig0038452:+6490 Msa1457100:CDS
TTGGGTTGGTTAGATTTGCA+GGG 0.495325 tig0038452:+6558 Msa1457100:CDS
TGGTGATGGTGTTGAGCTTG+AGG 0.495676 tig0038452:+6473 Msa1457100:CDS
GTTTAGGTTTAGTAGTTAAG+TGG 0.499448 tig0038452:+7650 Msa1457100:three_prime_UTR
TTGCTCCATATGGAGAGTAC+TGG 0.501285 tig0038452:+6235 Msa1457100:CDS
CAGTAGCAATATTACTAGAA+TGG 0.502715 tig0038452:+6889 Msa1457100:CDS
TCTTTCTCTATGCTGTAAAG+AGG 0.507350 tig0038452:+7744 Msa1457100:three_prime_UTR
TTTGTCCTAGGAGGATTAAC+GGG 0.509943 tig0038452:+6292 Msa1457100:CDS
AAACCAGAAAAGGAAGGGCC+TGG 0.510773 tig0038452:-5994 Msa1457100:intergenic
CACCTGGTGTAAGCCAGAAA+AGG 0.511358 tig0038452:-5918 Msa1457100:intergenic
CAAAAGGGTATTGCTAAGTA+GGG 0.513251 tig0038452:+7559 Msa1457100:three_prime_UTR
GATGAAAGTAAACAAGGTCT+GGG 0.513626 tig0038452:-5840 Msa1457100:intergenic
GTTTGGAAAGTGAGAGTGAA+TGG 0.514602 tig0038452:-5862 Msa1457100:intergenic
ACCATTTGGAGCTGGTAGGA+GGG 0.514884 tig0038452:+7271 Msa1457100:CDS
AGTGAAGGGTATGAGCTGTT+GGG 0.515751 tig0038452:+6504 Msa1457100:CDS
CAAGGTTGTTCCAAGGACCT+AGG 0.518382 tig0038452:+7445 Msa1457100:CDS
GTTTGTCCTGGAAAAGCTAT+GGG 0.521346 tig0038452:+7293 Msa1457100:CDS
AGGTTGGCACCATTTGGAGC+TGG 0.521780 tig0038452:+7263 Msa1457100:CDS
CTTGAGGAGTTGGTGAGTGA+AGG 0.523547 tig0038452:+6489 Msa1457100:CDS
GCTGTTCATGATGTTATGGT+TGG 0.524500 tig0038452:+7098 Msa1457100:CDS
CAACTGCTATGGTGAATATG+TGG 0.529595 tig0038452:+7144 Msa1457100:CDS
TCCTCCTAGGACAAAACAGA+TGG 0.537347 tig0038452:-6284 Msa1457100:intergenic
ACCCTCCTACCAGCTCCAAA+TGG 0.538408 tig0038452:-7272 Msa1457100:intergenic
AATGGGATCTGATTTGAGGT+TGG 0.540471 tig0038452:+7247 Msa1457100:CDS
GAAGAGAATGTCTGAAGGAA+GGG 0.540549 tig0038452:+6656 Msa1457100:CDS
GCCCATGATAAAAGTGGTCC+TGG 0.546926 tig0038452:-7068 Msa1457100:intergenic
GCATTAAGGGTGCATCCACC+AGG 0.548324 tig0038452:+7050 Msa1457100:CDS
AAATCTAACCAACCCAAAAG+AGG 0.552612 tig0038452:-6552 Msa1457100:intergenic
TCGTAAGCTGACTCTTTCAC+TGG 0.554859 tig0038452:-6186 Msa1457100:intergenic
AAACGTGCCCATGATAAAAG+TGG 0.554879 tig0038452:-7074 Msa1457100:intergenic
TTTAGGTTTAGTAGTTAAGT+GGG 0.555225 tig0038452:+7651 Msa1457100:three_prime_UTR
TGAAGAGAATGTCTGAAGGA+AGG 0.555473 tig0038452:+6655 Msa1457100:CDS
AGAATGGATTCTGGCTAGGA+TGG 0.555569 tig0038452:+6905 Msa1457100:CDS
AAAGCCCAAGCAAGCCCACC+TGG 0.557683 tig0038452:-5934 Msa1457100:intergenic
TGAGGTTGGTTTGAAAATGG+TGG 0.559394 tig0038452:+6332 Msa1457100:CDS
AAGTTGGACATGGATATTGT+GGG 0.560081 tig0038452:+7512 Msa1457100:three_prime_UTR
GTGTAGAGCTTTGGTGACAA+AGG 0.561035 tig0038452:+6593 Msa1457100:CDS
GGAACAACCTTGCACACAAG+TGG 0.568830 tig0038452:-7434 Msa1457100:intergenic
TTGAAGATGAGAAATAAGGA+AGG 0.569866 tig0038452:-5776 Msa1457100:intergenic
CTTTAGAATTTCCAACAACA+CGG 0.570100 tig0038452:-6971 Msa1457100:intergenic
AAAGTTGGACATGGATATTG+TGG 0.570232 tig0038452:+7511 Msa1457100:three_prime_UTR
TCTGAAGGAAGGGCTATAGT+TGG 0.570295 tig0038452:+6666 Msa1457100:CDS
GCTGGTAGGAGGGTTTGTCC+TGG 0.571225 tig0038452:+7281 Msa1457100:CDS
TACTAGAATGGATTCTGGCT+AGG 0.571240 tig0038452:+6901 Msa1457100:CDS
GTATAATGGGATCTGATTTG+AGG 0.571470 tig0038452:+7243 Msa1457100:CDS
CCAAACAAACCAGAAAAGGA+AGG 0.578640 tig0038452:-6000 Msa1457100:intergenic
AGTACTGGAGGAATTTGAGG+AGG 0.579725 tig0038452:+6250 Msa1457100:CDS
TCAAACCCGTTAATCCTCCT+AGG 0.581092 tig0038452:-6297 Msa1457100:intergenic
ACCTAGGGCTAAGCTAATGT+TGG 0.581506 tig0038452:+7461 Msa1457100:exon
TCCGAAAGGTACAACTGCTA+TGG 0.582322 tig0038452:+7133 Msa1457100:CDS
TTCACTTGAAATAATGAACC+GGG 0.585967 tig0038452:-6115 Msa1457100:intergenic
CAGAAGAGTTTAAGCCAGAG+AGG 0.587194 tig0038452:+7201 Msa1457100:CDS
GAAGAAACCACTTGTGTGCA+AGG 0.592868 tig0038452:+7427 Msa1457100:CDS
CTCCATATGGAGAGTACTGG+AGG 0.596336 tig0038452:+6238 Msa1457100:CDS
AAGAGGGAGCGAGAGAGTTG+CGG 0.596772 tig0038452:-5718 Msa1457100:intergenic
AAGATGAAATTCTGGAGACA+TGG 0.597977 tig0038452:-5809 Msa1457100:intergenic
AGTTGGACATGGATATTGTG+GGG 0.598383 tig0038452:+7513 Msa1457100:three_prime_UTR
AAGGTTGTTCCAAGGACCTA+GGG 0.603682 tig0038452:+7446 Msa1457100:CDS
TTGGTTTGAAAATGGTGGAG+AGG 0.606844 tig0038452:+6337 Msa1457100:CDS
TTGTGTGCAAGGTTGTTCCA+AGG 0.610008 tig0038452:+7438 Msa1457100:CDS
AACATCTACATAATTAGCAA+CGG 0.610773 tig0038452:-7700 Msa1457100:intergenic
GGGTGATATGGGTAGTGTTG+AGG 0.612456 tig0038452:+6374 Msa1457100:CDS
AGGGCCTGGAATAACAGACT+TGG 0.625646 tig0038452:-5980 Msa1457100:intergenic
TTGTATGAGAAAGTTGGACA+TGG 0.630465 tig0038452:+7502 Msa1457100:three_prime_UTR
CCTCCTAGGACAAAACAGAT+GGG 0.631536 tig0038452:-6283 Msa1457100:intergenic
GGCCATAACACATGATGAGA+TGG 0.635008 tig0038452:+7166 Msa1457100:CDS
AAGCCATCAACGACTCAGCA+CGG 0.637809 tig0038452:-6077 Msa1457100:intergenic
AAGATGAAGAGAATGTCTGA+AGG 0.637936 tig0038452:+6651 Msa1457100:CDS
TAACACATGATGAGATGGTG+TGG 0.642114 tig0038452:+7171 Msa1457100:CDS
GGTGACAAGCATGTTCCGAA+AGG 0.646671 tig0038452:+7119 Msa1457100:CDS
AACACATGATGAGATGGTGT+GGG 0.648904 tig0038452:+7172 Msa1457100:CDS
TGGCACCATTTGGAGCTGGT+AGG 0.649431 tig0038452:+7267 Msa1457100:CDS
ACCAACATTAGCTTAGCCCT+AGG 0.660215 tig0038452:-7462 Msa1457100:intergenic
CAAACAAACCAGAAAAGGAA+GGG 0.661167 tig0038452:-5999 Msa1457100:intergenic
TGGCTAGTTTGGCTAAAACA+CGG 0.661621 tig0038452:-6047 Msa1457100:intergenic
CATGATAAAAGTGGTCCTGG+TGG 0.662382 tig0038452:-7065 Msa1457100:intergenic
TGAATGGATGAAAGTAAACA+AGG 0.671428 tig0038452:-5846 Msa1457100:intergenic
AACTGCTATGGTGAATATGT+GGG 0.677394 tig0038452:+7145 Msa1457100:CDS
AGTTTGGCTAAAACACGGTG+TGG 0.697791 tig0038452:-6042 Msa1457100:intergenic
ACACATGATGAGATGGTGTG+GGG 0.746204 tig0038452:+7173 Msa1457100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAACATATAAAGAAATA+TGG - tig0038452:6774-6793 Msa1457100:intergenic 10.0%
!! TAAAAACATATAAAGAAATA+TGG - tig0038452:6774-6793 Msa1457100:intergenic 10.0%
!!! TTTTGTTTTCTTATGTTTTT+TGG + tig0038452:6798-6817 Msa1457100:intron 15.0%
!! AATTAGATTCTAAATAGAAA+AGG - tig0038452:7600-7619 Msa1457100:intergenic 15.0%
!!! TTTTGTTTTCTTATGTTTTT+TGG + tig0038452:6798-6817 Msa1457100:intron 15.0%
!! AATTAGATTCTAAATAGAAA+AGG - tig0038452:7600-7619 Msa1457100:intergenic 15.0%
!! AAATGTTATGATTTCTTTGA+TGG + tig0038452:6453-6472 Msa1457100:CDS 20.0%
!!! TTTGATTTTTGTCTTCTTTT+AGG + tig0038452:6842-6861 Msa1457100:intron 20.0%
!! AAATGTTATGATTTCTTTGA+TGG + tig0038452:6453-6472 Msa1457100:CDS 20.0%
!!! TTTGATTTTTGTCTTCTTTT+AGG + tig0038452:6842-6861 Msa1457100:intron 20.0%
!!! CTTTTTGAAGATGAGAAATA+AGG - tig0038452:5783-5802 Msa0768440:intergenic 25.0%
! AAAAGAAGAAGATGAAATTC+TGG - tig0038452:5820-5839 Msa0768440:intergenic 25.0%
!! TTTTGTTGGAAAGATAATAG+AGG + tig0038452:6623-6642 Msa1457100:CDS 25.0%
!!! TTCTTATGTTTTTTGGTGTT+TGG + tig0038452:6805-6824 Msa1457100:intron 25.0%
!!! TTTTAGGAAATGATTTTCAG+AGG + tig0038452:6858-6877 Msa1457100:intron 25.0%
!! AATATTACTAGAATGGATTC+TGG + tig0038452:6896-6915 Msa1457100:CDS 25.0%
! ACTTAACTACTAAACCTAAA+CGG - tig0038452:7651-7670 Msa1457100:intergenic 25.0%
!! TTTAGGTTTAGTAGTTAAGT+GGG + tig0038452:7651-7670 Msa1457100:three_prime_UTR 25.0%
! AACATCTACATAATTAGCAA+CGG - tig0038452:7703-7722 Msa1457100:intergenic 25.0%
! TTGCTAATTATGTAGATGTT+TGG + tig0038452:7703-7722 Msa1457100:three_prime_UTR 25.0%
!!! ATTATGTAGATGTTTGGTTT+TGG + tig0038452:7709-7728 Msa1457100:three_prime_UTR 25.0%
!!! CTTTTTGAAGATGAGAAATA+AGG - tig0038452:5783-5802 Msa1457100:intergenic 25.0%
! AAAAGAAGAAGATGAAATTC+TGG - tig0038452:5820-5839 Msa1457100:intergenic 25.0%
!! TTTTGTTGGAAAGATAATAG+AGG + tig0038452:6623-6642 Msa1457100:CDS 25.0%
!!! TTCTTATGTTTTTTGGTGTT+TGG + tig0038452:6805-6824 Msa1457100:intron 25.0%
!!! TTTTAGGAAATGATTTTCAG+AGG + tig0038452:6858-6877 Msa1457100:intron 25.0%
!! AATATTACTAGAATGGATTC+TGG + tig0038452:6896-6915 Msa1457100:CDS 25.0%
! ACTTAACTACTAAACCTAAA+CGG - tig0038452:7651-7670 Msa1457100:intergenic 25.0%
!! TTTAGGTTTAGTAGTTAAGT+GGG + tig0038452:7651-7670 Msa1457100:three_prime_UTR 25.0%
! AACATCTACATAATTAGCAA+CGG - tig0038452:7703-7722 Msa1457100:intergenic 25.0%
! TTGCTAATTATGTAGATGTT+TGG + tig0038452:7703-7722 Msa1457100:three_prime_UTR 25.0%
!!! ATTATGTAGATGTTTGGTTT+TGG + tig0038452:7709-7728 Msa1457100:three_prime_UTR 25.0%
TTGAAGATGAGAAATAAGGA+AGG - tig0038452:5779-5798 Msa0768440:intergenic 30.0%
TGAATGGATGAAAGTAAACA+AGG - tig0038452:5849-5868 Msa0768440:intergenic 30.0%
AATACCAAACAAACCAGAAA+AGG - tig0038452:6007-6026 Msa1457100:intergenic 30.0%
TTCACTTGAAATAATGAACC+GGG - tig0038452:6118-6137 Msa1457100:intergenic 30.0%
GTTCACTTGAAATAATGAAC+CGG - tig0038452:6119-6138 Msa1457100:intergenic 30.0%
!! ATTCTTTGTAGTTCTGCTTT+TGG + tig0038452:6156-6175 Msa1457100:CDS 30.0%
!! TTACGAGCTTTTGTTTCATA+GGG + tig0038452:6203-6222 Msa1457100:CDS 30.0%
!!! GTGAAAAAAGTGCTTCATTT+TGG + tig0038452:6396-6415 Msa1457100:CDS 30.0%
!! TATGATTTCTTTGATGGTGA+TGG + tig0038452:6459-6478 Msa1457100:CDS 30.0%
! AGTGATCATTTTCCTCTTTT+GGG + tig0038452:6540-6559 Msa1457100:CDS 30.0%
! ACAAAGGTTAATGCTTTTGT+TGG + tig0038452:6609-6628 Msa1457100:CDS 30.0%
! TGTTGACGTTTTACTTGATT+TGG + tig0038452:6695-6714 Msa1457100:CDS 30.0%
TGATATGATTGCAGTTCTTT+GGG + tig0038452:6743-6762 Msa1457100:CDS 30.0%
CAGTAGCAATATTACTAGAA+TGG + tig0038452:6889-6908 Msa1457100:CDS 30.0%
!! CTTTAGAATTTCCAACAACA+CGG - tig0038452:6974-6993 Msa1457100:intergenic 30.0%
TTTAGCTGTTCATGATGTTA+TGG + tig0038452:7094-7113 Msa1457100:CDS 30.0%
AATGAGGATGTGAGTATAAT+GGG + tig0038452:7230-7249 Msa1457100:CDS 30.0%
AGTTACTTCACAACTTCAAA+TGG + tig0038452:7345-7364 Msa1457100:CDS 30.0%
GTTACTTCACAACTTCAAAT+GGG + tig0038452:7346-7365 Msa1457100:CDS 30.0%
TTAACAGGTGAATCATCATA+TGG - tig0038452:7374-7393 Msa1457100:intergenic 30.0%
TGATGATTCACCTGTTAATT+TGG + tig0038452:7376-7395 Msa1457100:CDS 30.0%
CTTTACTTGTATGAGAAAGT+TGG + tig0038452:7496-7515 Msa1457100:three_prime_UTR 30.0%
! TTTGGTTTCTTTGCTTTGTT+TGG + tig0038452:7536-7555 Msa1457100:three_prime_UTR 30.0%
! GTTTAGGTTTAGTAGTTAAG+TGG + tig0038452:7650-7669 Msa1457100:three_prime_UTR 30.0%
TTGAAGATGAGAAATAAGGA+AGG - tig0038452:5779-5798 Msa1457100:intergenic 30.0%
TGAATGGATGAAAGTAAACA+AGG - tig0038452:5849-5868 Msa1457100:intergenic 30.0%
AATACCAAACAAACCAGAAA+AGG - tig0038452:6007-6026 Msa1457100:intergenic 30.0%
TTCACTTGAAATAATGAACC+GGG - tig0038452:6118-6137 Msa1457100:intergenic 30.0%
GTTCACTTGAAATAATGAAC+CGG - tig0038452:6119-6138 Msa1457100:intergenic 30.0%
!! ATTCTTTGTAGTTCTGCTTT+TGG + tig0038452:6156-6175 Msa1457100:CDS 30.0%
!! TTACGAGCTTTTGTTTCATA+GGG + tig0038452:6203-6222 Msa1457100:CDS 30.0%
!!! GTGAAAAAAGTGCTTCATTT+TGG + tig0038452:6396-6415 Msa1457100:CDS 30.0%
!! TATGATTTCTTTGATGGTGA+TGG + tig0038452:6459-6478 Msa1457100:CDS 30.0%
! AGTGATCATTTTCCTCTTTT+GGG + tig0038452:6540-6559 Msa1457100:CDS 30.0%
! ACAAAGGTTAATGCTTTTGT+TGG + tig0038452:6609-6628 Msa1457100:CDS 30.0%
! TGTTGACGTTTTACTTGATT+TGG + tig0038452:6695-6714 Msa1457100:CDS 30.0%
TGATATGATTGCAGTTCTTT+GGG + tig0038452:6743-6762 Msa1457100:CDS 30.0%
CAGTAGCAATATTACTAGAA+TGG + tig0038452:6889-6908 Msa1457100:CDS 30.0%
!! CTTTAGAATTTCCAACAACA+CGG - tig0038452:6974-6993 Msa1457100:intergenic 30.0%
TTTAGCTGTTCATGATGTTA+TGG + tig0038452:7094-7113 Msa1457100:CDS 30.0%
AATGAGGATGTGAGTATAAT+GGG + tig0038452:7230-7249 Msa1457100:CDS 30.0%
AGTTACTTCACAACTTCAAA+TGG + tig0038452:7345-7364 Msa1457100:CDS 30.0%
GTTACTTCACAACTTCAAAT+GGG + tig0038452:7346-7365 Msa1457100:CDS 30.0%
TTAACAGGTGAATCATCATA+TGG - tig0038452:7374-7393 Msa1457100:intergenic 30.0%
TGATGATTCACCTGTTAATT+TGG + tig0038452:7376-7395 Msa1457100:CDS 30.0%
CTTTACTTGTATGAGAAAGT+TGG + tig0038452:7496-7515 Msa1457100:three_prime_UTR 30.0%
! TTTGGTTTCTTTGCTTTGTT+TGG + tig0038452:7536-7555 Msa1457100:three_prime_UTR 30.0%
! GTTTAGGTTTAGTAGTTAAG+TGG + tig0038452:7650-7669 Msa1457100:three_prime_UTR 30.0%
GATGAGAAATAAGGAAGGTT+GGG - tig0038452:5774-5793 Msa0768440:intergenic 35.0%
AGATGAGAAATAAGGAAGGT+TGG - tig0038452:5775-5794 Msa0768440:intergenic 35.0%
! AAGATGAAATTCTGGAGACA+TGG - tig0038452:5812-5831 Msa0768440:intergenic 35.0%
GATGAAAGTAAACAAGGTCT+GGG - tig0038452:5843-5862 Msa0768440:intergenic 35.0%
CAAACAAACCAGAAAAGGAA+GGG - tig0038452:6002-6021 Msa1457100:intergenic 35.0%
!!! CTTTTTCTGTTGGTTTAACC+CGG + tig0038452:6097-6116 Msa1457100:CDS 35.0%
AGAATCTCTTTAGCAGTTTC+TGG - tig0038452:6141-6160 Msa1457100:intergenic 35.0%
!! CTTACGAGCTTTTGTTTCAT+AGG + tig0038452:6202-6221 Msa1457100:CDS 35.0%
!! CTTTTGTTTCATAGGGCAAT+GGG + tig0038452:6210-6229 Msa1457100:CDS 35.0%
!! TTTTGTTTCATAGGGCAATG+GGG + tig0038452:6211-6230 Msa1457100:CDS 35.0%
! TTTTGTCCTAGGAGGATTAA+CGG + tig0038452:6291-6310 Msa1457100:CDS 35.0%
!!! TTAACGGGTTTGAAGGTTTT+AGG + tig0038452:6307-6326 Msa1457100:CDS 35.0%
! GAGAGGATAGAGTTTTTGAT+GGG + tig0038452:6354-6373 Msa1457100:CDS 35.0%
!! AGAGTTTTTGATGGGTGATA+TGG + tig0038452:6362-6381 Msa1457100:CDS 35.0%
!! GAGTTTTTGATGGGTGATAT+GGG + tig0038452:6363-6382 Msa1457100:CDS 35.0%
! AATGTGATGATGACTGTGTT+TGG + tig0038452:6429-6448 Msa1457100:CDS 35.0%
! ATGTGATGATGACTGTGTTT+GGG + tig0038452:6430-6449 Msa1457100:CDS 35.0%
! GAGTGATCATTTTCCTCTTT+TGG + tig0038452:6539-6558 Msa1457100:CDS 35.0%
!! ATCATTTTCCTCTTTTGGGT+TGG + tig0038452:6544-6563 Msa1457100:CDS 35.0%
AAATCTAACCAACCCAAAAG+AGG - tig0038452:6555-6574 Msa1457100:intergenic 35.0%
AAGATGAAGAGAATGTCTGA+AGG + tig0038452:6651-6670 Msa1457100:CDS 35.0%
!!! TGACGTTTTACTTGATTTGG+AGG + tig0038452:6698-6717 Msa1457100:CDS 35.0%
CTGATATGATTGCAGTTCTT+TGG + tig0038452:6742-6761 Msa1457100:CDS 35.0%
GAAGAAATTTACCGTGTTGT+TGG + tig0038452:6960-6979 Msa1457100:CDS 35.0%
!! CATTGTGAAAGAGGCATTAA+GGG + tig0038452:7037-7056 Msa1457100:CDS 35.0%
AACTGCTATGGTGAATATGT+GGG + tig0038452:7145-7164 Msa1457100:CDS 35.0%
GAATGAGGATGTGAGTATAA+TGG + tig0038452:7229-7248 Msa1457100:CDS 35.0%
! GTATAATGGGATCTGATTTG+AGG + tig0038452:7243-7262 Msa1457100:CDS 35.0%
! TGATTCACCTGTTAATTTGG+AGG + tig0038452:7379-7398 Msa1457100:CDS 35.0%
AGACATTCCTCCAAATTAAC+AGG - tig0038452:7389-7408 Msa1457100:intergenic 35.0%
GGAATGTCTTAAGCTTTCTA+TGG + tig0038452:7400-7419 Msa1457100:CDS 35.0%
TTGTATGAGAAAGTTGGACA+TGG + tig0038452:7502-7521 Msa1457100:three_prime_UTR 35.0%
AAAGTTGGACATGGATATTG+TGG + tig0038452:7511-7530 Msa1457100:three_prime_UTR 35.0%
AAGTTGGACATGGATATTGT+GGG + tig0038452:7512-7531 Msa1457100:three_prime_UTR 35.0%
!! TCTTTGCTTTGTTTGGCAAA+AGG + tig0038452:7543-7562 Msa1457100:three_prime_UTR 35.0%
!! CTTTGCTTTGTTTGGCAAAA+GGG + tig0038452:7544-7563 Msa1457100:three_prime_UTR 35.0%
!! CAAAAGGGTATTGCTAAGTA+GGG + tig0038452:7559-7578 Msa1457100:three_prime_UTR 35.0%
AAGTAGGGTTATGGTTTCAT+AGG + tig0038452:7574-7593 Msa1457100:three_prime_UTR 35.0%
!!! TGTTTTGTTGTTGACCGTTT+AGG + tig0038452:7634-7653 Msa1457100:three_prime_UTR 35.0%
TTTAGTAGTTAAGTGGGTGT+TGG + tig0038452:7657-7676 Msa1457100:three_prime_UTR 35.0%
TTAGTAGTTAAGTGGGTGTT+GGG + tig0038452:7658-7677 Msa1457100:three_prime_UTR 35.0%
TCTTTCTCTATGCTGTAAAG+AGG + tig0038452:7744-7763 Msa1457100:three_prime_UTR 35.0%
GATGAGAAATAAGGAAGGTT+GGG - tig0038452:5774-5793 Msa1457100:intergenic 35.0%
AGATGAGAAATAAGGAAGGT+TGG - tig0038452:5775-5794 Msa1457100:intergenic 35.0%
! AAGATGAAATTCTGGAGACA+TGG - tig0038452:5812-5831 Msa1457100:intergenic 35.0%
GATGAAAGTAAACAAGGTCT+GGG - tig0038452:5843-5862 Msa1457100:intergenic 35.0%
CAAACAAACCAGAAAAGGAA+GGG - tig0038452:6002-6021 Msa1457100:intergenic 35.0%
!!! CTTTTTCTGTTGGTTTAACC+CGG + tig0038452:6097-6116 Msa1457100:CDS 35.0%
AGAATCTCTTTAGCAGTTTC+TGG - tig0038452:6141-6160 Msa1457100:intergenic 35.0%
!! CTTACGAGCTTTTGTTTCAT+AGG + tig0038452:6202-6221 Msa1457100:CDS 35.0%
!! CTTTTGTTTCATAGGGCAAT+GGG + tig0038452:6210-6229 Msa1457100:CDS 35.0%
!! TTTTGTTTCATAGGGCAATG+GGG + tig0038452:6211-6230 Msa1457100:CDS 35.0%
! TTTTGTCCTAGGAGGATTAA+CGG + tig0038452:6291-6310 Msa1457100:CDS 35.0%
!!! TTAACGGGTTTGAAGGTTTT+AGG + tig0038452:6307-6326 Msa1457100:CDS 35.0%
! GAGAGGATAGAGTTTTTGAT+GGG + tig0038452:6354-6373 Msa1457100:CDS 35.0%
!! AGAGTTTTTGATGGGTGATA+TGG + tig0038452:6362-6381 Msa1457100:CDS 35.0%
!! GAGTTTTTGATGGGTGATAT+GGG + tig0038452:6363-6382 Msa1457100:CDS 35.0%
! AATGTGATGATGACTGTGTT+TGG + tig0038452:6429-6448 Msa1457100:CDS 35.0%
! ATGTGATGATGACTGTGTTT+GGG + tig0038452:6430-6449 Msa1457100:CDS 35.0%
! GAGTGATCATTTTCCTCTTT+TGG + tig0038452:6539-6558 Msa1457100:CDS 35.0%
!! ATCATTTTCCTCTTTTGGGT+TGG + tig0038452:6544-6563 Msa1457100:CDS 35.0%
AAATCTAACCAACCCAAAAG+AGG - tig0038452:6555-6574 Msa1457100:intergenic 35.0%
AAGATGAAGAGAATGTCTGA+AGG + tig0038452:6651-6670 Msa1457100:CDS 35.0%
!!! TGACGTTTTACTTGATTTGG+AGG + tig0038452:6698-6717 Msa1457100:CDS 35.0%
CTGATATGATTGCAGTTCTT+TGG + tig0038452:6742-6761 Msa1457100:CDS 35.0%
GAAGAAATTTACCGTGTTGT+TGG + tig0038452:6960-6979 Msa1457100:CDS 35.0%
!! CATTGTGAAAGAGGCATTAA+GGG + tig0038452:7037-7056 Msa1457100:CDS 35.0%
AACTGCTATGGTGAATATGT+GGG + tig0038452:7145-7164 Msa1457100:CDS 35.0%
GAATGAGGATGTGAGTATAA+TGG + tig0038452:7229-7248 Msa1457100:CDS 35.0%
! GTATAATGGGATCTGATTTG+AGG + tig0038452:7243-7262 Msa1457100:CDS 35.0%
! TGATTCACCTGTTAATTTGG+AGG + tig0038452:7379-7398 Msa1457100:CDS 35.0%
AGACATTCCTCCAAATTAAC+AGG - tig0038452:7389-7408 Msa1457100:intergenic 35.0%
GGAATGTCTTAAGCTTTCTA+TGG + tig0038452:7400-7419 Msa1457100:CDS 35.0%
TTGTATGAGAAAGTTGGACA+TGG + tig0038452:7502-7521 Msa1457100:three_prime_UTR 35.0%
AAAGTTGGACATGGATATTG+TGG + tig0038452:7511-7530 Msa1457100:three_prime_UTR 35.0%
AAGTTGGACATGGATATTGT+GGG + tig0038452:7512-7531 Msa1457100:three_prime_UTR 35.0%
!! TCTTTGCTTTGTTTGGCAAA+AGG + tig0038452:7543-7562 Msa1457100:three_prime_UTR 35.0%
!! CTTTGCTTTGTTTGGCAAAA+GGG + tig0038452:7544-7563 Msa1457100:three_prime_UTR 35.0%
!! CAAAAGGGTATTGCTAAGTA+GGG + tig0038452:7559-7578 Msa1457100:three_prime_UTR 35.0%
AAGTAGGGTTATGGTTTCAT+AGG + tig0038452:7574-7593 Msa1457100:three_prime_UTR 35.0%
!!! TGTTTTGTTGTTGACCGTTT+AGG + tig0038452:7634-7653 Msa1457100:three_prime_UTR 35.0%
TTTAGTAGTTAAGTGGGTGT+TGG + tig0038452:7657-7676 Msa1457100:three_prime_UTR 35.0%
TTAGTAGTTAAGTGGGTGTT+GGG + tig0038452:7658-7677 Msa1457100:three_prime_UTR 35.0%
TCTTTCTCTATGCTGTAAAG+AGG + tig0038452:7744-7763 Msa1457100:three_prime_UTR 35.0%
TAGAGAGAGTGAGAGAAAGA+GGG - tig0038452:5737-5756 Msa0768440:intergenic 40.0%
ATAGAGAGAGTGAGAGAAAG+AGG - tig0038452:5738-5757 Msa0768440:intergenic 40.0%
ATAAGGAAGGTTGGGTAGTT+TGG - tig0038452:5766-5785 Msa0768440:intergenic 40.0%
GGATGAAAGTAAACAAGGTC+TGG - tig0038452:5844-5863 Msa0768440:intergenic 40.0%
GTTTGGAAAGTGAGAGTGAA+TGG - tig0038452:5865-5884 Msa0768440:intergenic 40.0%
GAAAGAAGCAAAGTGCAGTT+TGG - tig0038452:5882-5901 Msa0768440:intergenic 40.0%
TGCTTCTTTCTCTCTGTTCT+TGG + tig0038452:5892-5911 Msa1457100:CDS 40.0%
! CTGTTCTTGGTTTCCTTTTC+TGG + tig0038452:5905-5924 Msa1457100:CDS 40.0%
CCAAACAAACCAGAAAAGGA+AGG - tig0038452:6003-6022 Msa1457100:intergenic 40.0%
!!! CCTTCCTTTTCTGGTTTGTT+TGG + tig0038452:6000-6019 Msa1457100:CDS 40.0%
! GGTTTGTTTGGTATTCTCTC+AGG + tig0038452:6012-6031 Msa1457100:CDS 40.0%
!! TGGCTAGTTTGGCTAAAACA+CGG - tig0038452:6050-6069 Msa1457100:intergenic 40.0%
!!! TCGTTGATGGCTTTTTCTGT+TGG + tig0038452:6087-6106 Msa1457100:CDS 40.0%
!! GCTTTTGTTTCATAGGGCAA+TGG + tig0038452:6209-6228 Msa1457100:CDS 40.0%
TTTGTCCTAGGAGGATTAAC+GGG + tig0038452:6292-6311 Msa1457100:CDS 40.0%
!!! GTTTGAAGGTTTTAGGAGTG+AGG + tig0038452:6314-6333 Msa1457100:CDS 40.0%
!! GAGTGAGGTTGGTTTGAAAA+TGG + tig0038452:6329-6348 Msa1457100:CDS 40.0%
!! TGAGGTTGGTTTGAAAATGG+TGG + tig0038452:6332-6351 Msa1457100:CDS 40.0%
! TTGGTTTGAAAATGGTGGAG+AGG + tig0038452:6337-6356 Msa1457100:CDS 40.0%
! GGAGAGGATAGAGTTTTTGA+TGG + tig0038452:6353-6372 Msa1457100:CDS 40.0%
!! AGCTGTTGGGTGTTTTTAAC+TGG + tig0038452:6517-6536 Msa1457100:CDS 40.0%
!! TTTGGGTTGGTTAGATTTGC+AGG + tig0038452:6557-6576 Msa1457100:CDS 40.0%
!! TTGGGTTGGTTAGATTTGCA+GGG + tig0038452:6558-6577 Msa1457100:CDS 40.0%
! ATTTGCAGGGTGTTAGGAAA+AGG + tig0038452:6571-6590 Msa1457100:CDS 40.0%
! TAGGAAAAGGTGTAGAGCTT+TGG + tig0038452:6584-6603 Msa1457100:CDS 40.0%
TGAAGAGAATGTCTGAAGGA+AGG + tig0038452:6655-6674 Msa1457100:CDS 40.0%
GAAGAGAATGTCTGAAGGAA+GGG + tig0038452:6656-6675 Msa1457100:CDS 40.0%
! TACTAGAATGGATTCTGGCT+AGG + tig0038452:6901-6920 Msa1457100:CDS 40.0%
! TGTGCTTTTGCTTGTATCTC+TGG - tig0038452:6939-6958 Msa1457100:intergenic 40.0%
CTTGCAATGCATTGTGAAAG+AGG + tig0038452:7028-7047 Msa1457100:CDS 40.0%
!! GCATTGTGAAAGAGGCATTA+AGG + tig0038452:7036-7055 Msa1457100:CDS 40.0%
!! ACCAGGACCACTTTTATCAT+GGG + tig0038452:7067-7086 Msa1457100:CDS 40.0%
AAACGTGCCCATGATAAAAG+TGG - tig0038452:7077-7096 Msa1457100:intergenic 40.0%
GCTGTTCATGATGTTATGGT+TGG + tig0038452:7098-7117 Msa1457100:CDS 40.0%
ACCATAGCAGTTGTACCTTT+CGG - tig0038452:7137-7156 Msa1457100:intergenic 40.0%
CAACTGCTATGGTGAATATG+TGG + tig0038452:7144-7163 Msa1457100:CDS 40.0%
CACCATCTCATCATGTGTTA+TGG - tig0038452:7171-7190 Msa1457100:intergenic 40.0%
TAACACATGATGAGATGGTG+TGG + tig0038452:7171-7190 Msa1457100:CDS 40.0%
AACACATGATGAGATGGTGT+GGG + tig0038452:7172-7191 Msa1457100:CDS 40.0%
TCCTCATTCATAAACCTCTC+TGG - tig0038452:7218-7237 Msa1457100:intergenic 40.0%
! AATGGGATCTGATTTGAGGT+TGG + tig0038452:7247-7266 Msa1457100:CDS 40.0%
GTTTGTCCTGGAAAAGCTAT+GGG + tig0038452:7293-7312 Msa1457100:CDS 40.0%
! GTTTGGCTTCTGTTCATCTT+TGG + tig0038452:7315-7334 Msa1457100:CDS 40.0%
AGTTGGACATGGATATTGTG+GGG + tig0038452:7513-7532 Msa1457100:three_prime_UTR 40.0%
!! GCAAAAGGGTATTGCTAAGT+AGG + tig0038452:7558-7577 Msa1457100:three_prime_UTR 40.0%
GGTATTGCTAAGTAGGGTTA+TGG + tig0038452:7565-7584 Msa1457100:three_prime_UTR 40.0%
TAGAGAGAGTGAGAGAAAGA+GGG - tig0038452:5737-5756 Msa1457100:intergenic 40.0%
ATAGAGAGAGTGAGAGAAAG+AGG - tig0038452:5738-5757 Msa1457100:intergenic 40.0%
ATAAGGAAGGTTGGGTAGTT+TGG - tig0038452:5766-5785 Msa1457100:intergenic 40.0%
GGATGAAAGTAAACAAGGTC+TGG - tig0038452:5844-5863 Msa1457100:intergenic 40.0%
GTTTGGAAAGTGAGAGTGAA+TGG - tig0038452:5865-5884 Msa1457100:intergenic 40.0%
GAAAGAAGCAAAGTGCAGTT+TGG - tig0038452:5882-5901 Msa1457100:intergenic 40.0%
TGCTTCTTTCTCTCTGTTCT+TGG + tig0038452:5892-5911 Msa1457100:CDS 40.0%
! CTGTTCTTGGTTTCCTTTTC+TGG + tig0038452:5905-5924 Msa1457100:CDS 40.0%
CCAAACAAACCAGAAAAGGA+AGG - tig0038452:6003-6022 Msa1457100:intergenic 40.0%
!!! CCTTCCTTTTCTGGTTTGTT+TGG + tig0038452:6000-6019 Msa1457100:CDS 40.0%
! GGTTTGTTTGGTATTCTCTC+AGG + tig0038452:6012-6031 Msa1457100:CDS 40.0%
!! TGGCTAGTTTGGCTAAAACA+CGG - tig0038452:6050-6069 Msa1457100:intergenic 40.0%
!!! TCGTTGATGGCTTTTTCTGT+TGG + tig0038452:6087-6106 Msa1457100:CDS 40.0%
!! GCTTTTGTTTCATAGGGCAA+TGG + tig0038452:6209-6228 Msa1457100:CDS 40.0%
TTTGTCCTAGGAGGATTAAC+GGG + tig0038452:6292-6311 Msa1457100:CDS 40.0%
!!! GTTTGAAGGTTTTAGGAGTG+AGG + tig0038452:6314-6333 Msa1457100:CDS 40.0%
!! GAGTGAGGTTGGTTTGAAAA+TGG + tig0038452:6329-6348 Msa1457100:CDS 40.0%
!! TGAGGTTGGTTTGAAAATGG+TGG + tig0038452:6332-6351 Msa1457100:CDS 40.0%
! TTGGTTTGAAAATGGTGGAG+AGG + tig0038452:6337-6356 Msa1457100:CDS 40.0%
! GGAGAGGATAGAGTTTTTGA+TGG + tig0038452:6353-6372 Msa1457100:CDS 40.0%
!! AGCTGTTGGGTGTTTTTAAC+TGG + tig0038452:6517-6536 Msa1457100:CDS 40.0%
!! TTTGGGTTGGTTAGATTTGC+AGG + tig0038452:6557-6576 Msa1457100:CDS 40.0%
!! TTGGGTTGGTTAGATTTGCA+GGG + tig0038452:6558-6577 Msa1457100:CDS 40.0%
! ATTTGCAGGGTGTTAGGAAA+AGG + tig0038452:6571-6590 Msa1457100:CDS 40.0%
! TAGGAAAAGGTGTAGAGCTT+TGG + tig0038452:6584-6603 Msa1457100:CDS 40.0%
TGAAGAGAATGTCTGAAGGA+AGG + tig0038452:6655-6674 Msa1457100:CDS 40.0%
GAAGAGAATGTCTGAAGGAA+GGG + tig0038452:6656-6675 Msa1457100:CDS 40.0%
! TACTAGAATGGATTCTGGCT+AGG + tig0038452:6901-6920 Msa1457100:CDS 40.0%
! TGTGCTTTTGCTTGTATCTC+TGG - tig0038452:6939-6958 Msa1457100:intergenic 40.0%
CTTGCAATGCATTGTGAAAG+AGG + tig0038452:7028-7047 Msa1457100:CDS 40.0%
!! GCATTGTGAAAGAGGCATTA+AGG + tig0038452:7036-7055 Msa1457100:CDS 40.0%
!! ACCAGGACCACTTTTATCAT+GGG + tig0038452:7067-7086 Msa1457100:CDS 40.0%
AAACGTGCCCATGATAAAAG+TGG - tig0038452:7077-7096 Msa1457100:intergenic 40.0%
GCTGTTCATGATGTTATGGT+TGG + tig0038452:7098-7117 Msa1457100:CDS 40.0%
ACCATAGCAGTTGTACCTTT+CGG - tig0038452:7137-7156 Msa1457100:intergenic 40.0%
CAACTGCTATGGTGAATATG+TGG + tig0038452:7144-7163 Msa1457100:CDS 40.0%
CACCATCTCATCATGTGTTA+TGG - tig0038452:7171-7190 Msa1457100:intergenic 40.0%
TAACACATGATGAGATGGTG+TGG + tig0038452:7171-7190 Msa1457100:CDS 40.0%
AACACATGATGAGATGGTGT+GGG + tig0038452:7172-7191 Msa1457100:CDS 40.0%
TCCTCATTCATAAACCTCTC+TGG - tig0038452:7218-7237 Msa1457100:intergenic 40.0%
! AATGGGATCTGATTTGAGGT+TGG + tig0038452:7247-7266 Msa1457100:CDS 40.0%
GTTTGTCCTGGAAAAGCTAT+GGG + tig0038452:7293-7312 Msa1457100:CDS 40.0%
! GTTTGGCTTCTGTTCATCTT+TGG + tig0038452:7315-7334 Msa1457100:CDS 40.0%
AGTTGGACATGGATATTGTG+GGG + tig0038452:7513-7532 Msa1457100:three_prime_UTR 40.0%
!! GCAAAAGGGTATTGCTAAGT+AGG + tig0038452:7558-7577 Msa1457100:three_prime_UTR 40.0%
GGTATTGCTAAGTAGGGTTA+TGG + tig0038452:7565-7584 Msa1457100:three_prime_UTR 40.0%
!!! TTCCTTTTCTGGCTTACACC+AGG + tig0038452:5916-5935 Msa1457100:CDS 45.0%
!!! TTTTCTGGCTTACACCAGGT+GGG + tig0038452:5920-5939 Msa1457100:CDS 45.0%
TCAGCCAAGTCTGTTATTCC+AGG + tig0038452:5976-5995 Msa1457100:CDS 45.0%
AGTTTGGCTAAAACACGGTG+TGG - tig0038452:6045-6064 Msa1457100:intergenic 45.0%
! TCGTAAGCTGACTCTTTCAC+TGG - tig0038452:6189-6208 Msa1457100:intergenic 45.0%
! TTGCTCCATATGGAGAGTAC+TGG + tig0038452:6235-6254 Msa1457100:CDS 45.0%
TTCCTCCAGTACTCTCCATA+TGG - tig0038452:6243-6262 Msa1457100:intergenic 45.0%
!! GAGAGTACTGGAGGAATTTG+AGG + tig0038452:6247-6266 Msa1457100:CDS 45.0%
! AGTACTGGAGGAATTTGAGG+AGG + tig0038452:6250-6269 Msa1457100:CDS 45.0%
! CAACCCATCTGTTTTGTCCT+AGG + tig0038452:6280-6299 Msa1457100:CDS 45.0%
CCTCCTAGGACAAAACAGAT+GGG - tig0038452:6286-6305 Msa1457100:intergenic 45.0%
TCCTCCTAGGACAAAACAGA+TGG - tig0038452:6287-6306 Msa1457100:intergenic 45.0%
TCAAACCCGTTAATCCTCCT+AGG - tig0038452:6300-6319 Msa1457100:intergenic 45.0%
!! AGGAGGATTAACGGGTTTGA+AGG + tig0038452:6300-6319 Msa1457100:CDS 45.0%
!!! GAAGGTTTTAGGAGTGAGGT+TGG + tig0038452:6318-6337 Msa1457100:CDS 45.0%
!! TTGAGGAGTTGGTGAGTGAA+GGG + tig0038452:6490-6509 Msa1457100:CDS 45.0%
! AGTGAAGGGTATGAGCTGTT+GGG + tig0038452:6504-6523 Msa1457100:CDS 45.0%
! GGTTAGATTTGCAGGGTGTT+AGG + tig0038452:6565-6584 Msa1457100:CDS 45.0%
! GTGTAGAGCTTTGGTGACAA+AGG + tig0038452:6593-6612 Msa1457100:CDS 45.0%
TCTGAAGGAAGGGCTATAGT+TGG + tig0038452:6666-6685 Msa1457100:CDS 45.0%
! AGAATGGATTCTGGCTAGGA+TGG + tig0038452:6905-6924 Msa1457100:CDS 45.0%
CATGATAAAAGTGGTCCTGG+TGG - tig0038452:7068-7087 Msa1457100:intergenic 45.0%
!! CACCAGGACCACTTTTATCA+TGG + tig0038452:7066-7085 Msa1457100:CDS 45.0%
! TCCGAAAGGTACAACTGCTA+TGG + tig0038452:7133-7152 Msa1457100:CDS 45.0%
GGCCATAACACATGATGAGA+TGG + tig0038452:7166-7185 Msa1457100:CDS 45.0%
ACACATGATGAGATGGTGTG+GGG + tig0038452:7173-7192 Msa1457100:CDS 45.0%
! CTCTCTGGCTTAAACTCTTC+TGG - tig0038452:7203-7222 Msa1457100:intergenic 45.0%
CAGAAGAGTTTAAGCCAGAG+AGG + tig0038452:7201-7220 Msa1457100:CDS 45.0%
GCCAGAGAGGTTTATGAATG+AGG + tig0038452:7214-7233 Msa1457100:CDS 45.0%
! GATTTGAGGTTGGCACCATT+TGG + tig0038452:7257-7276 Msa1457100:CDS 45.0%
GGTTTGTCCTGGAAAAGCTA+TGG + tig0038452:7292-7311 Msa1457100:CDS 45.0%
TCCTGGAAAAGCTATGGGTT+TGG + tig0038452:7298-7317 Msa1457100:CDS 45.0%
GAAGAAACCACTTGTGTGCA+AGG + tig0038452:7427-7446 Msa1457100:CDS 45.0%
TTGTGTGCAAGGTTGTTCCA+AGG + tig0038452:7438-7457 Msa1457100:CDS 45.0%
AAGGTTGTTCCAAGGACCTA+GGG + tig0038452:7446-7465 Msa1457100:CDS 45.0%
ACCTAGGGCTAAGCTAATGT+TGG + tig0038452:7461-7480 Msa1457100:exon 45.0%
! ACCAACATTAGCTTAGCCCT+AGG - tig0038452:7465-7484 Msa1457100:intergenic 45.0%
GACATGGATATTGTGGGGTT+TGG + tig0038452:7518-7537 Msa1457100:three_prime_UTR 45.0%
!!! TTCCTTTTCTGGCTTACACC+AGG + tig0038452:5916-5935 Msa1457100:CDS 45.0%
!!! TTTTCTGGCTTACACCAGGT+GGG + tig0038452:5920-5939 Msa1457100:CDS 45.0%
TCAGCCAAGTCTGTTATTCC+AGG + tig0038452:5976-5995 Msa1457100:CDS 45.0%
AGTTTGGCTAAAACACGGTG+TGG - tig0038452:6045-6064 Msa1457100:intergenic 45.0%
! TCGTAAGCTGACTCTTTCAC+TGG - tig0038452:6189-6208 Msa1457100:intergenic 45.0%
! TTGCTCCATATGGAGAGTAC+TGG + tig0038452:6235-6254 Msa1457100:CDS 45.0%
TTCCTCCAGTACTCTCCATA+TGG - tig0038452:6243-6262 Msa1457100:intergenic 45.0%
!! GAGAGTACTGGAGGAATTTG+AGG + tig0038452:6247-6266 Msa1457100:CDS 45.0%
! AGTACTGGAGGAATTTGAGG+AGG + tig0038452:6250-6269 Msa1457100:CDS 45.0%
! CAACCCATCTGTTTTGTCCT+AGG + tig0038452:6280-6299 Msa1457100:CDS 45.0%
CCTCCTAGGACAAAACAGAT+GGG - tig0038452:6286-6305 Msa1457100:intergenic 45.0%
TCCTCCTAGGACAAAACAGA+TGG - tig0038452:6287-6306 Msa1457100:intergenic 45.0%
TCAAACCCGTTAATCCTCCT+AGG - tig0038452:6300-6319 Msa1457100:intergenic 45.0%
!! AGGAGGATTAACGGGTTTGA+AGG + tig0038452:6300-6319 Msa1457100:CDS 45.0%
!!! GAAGGTTTTAGGAGTGAGGT+TGG + tig0038452:6318-6337 Msa1457100:CDS 45.0%
!! TTGAGGAGTTGGTGAGTGAA+GGG + tig0038452:6490-6509 Msa1457100:CDS 45.0%
! AGTGAAGGGTATGAGCTGTT+GGG + tig0038452:6504-6523 Msa1457100:CDS 45.0%
! GGTTAGATTTGCAGGGTGTT+AGG + tig0038452:6565-6584 Msa1457100:CDS 45.0%
! GTGTAGAGCTTTGGTGACAA+AGG + tig0038452:6593-6612 Msa1457100:CDS 45.0%
TCTGAAGGAAGGGCTATAGT+TGG + tig0038452:6666-6685 Msa1457100:CDS 45.0%
! AGAATGGATTCTGGCTAGGA+TGG + tig0038452:6905-6924 Msa1457100:CDS 45.0%
CATGATAAAAGTGGTCCTGG+TGG - tig0038452:7068-7087 Msa1457100:intergenic 45.0%
!! CACCAGGACCACTTTTATCA+TGG + tig0038452:7066-7085 Msa1457100:CDS 45.0%
! TCCGAAAGGTACAACTGCTA+TGG + tig0038452:7133-7152 Msa1457100:CDS 45.0%
GGCCATAACACATGATGAGA+TGG + tig0038452:7166-7185 Msa1457100:CDS 45.0%
ACACATGATGAGATGGTGTG+GGG + tig0038452:7173-7192 Msa1457100:CDS 45.0%
! CTCTCTGGCTTAAACTCTTC+TGG - tig0038452:7203-7222 Msa1457100:intergenic 45.0%
CAGAAGAGTTTAAGCCAGAG+AGG + tig0038452:7201-7220 Msa1457100:CDS 45.0%
GCCAGAGAGGTTTATGAATG+AGG + tig0038452:7214-7233 Msa1457100:CDS 45.0%
! GATTTGAGGTTGGCACCATT+TGG + tig0038452:7257-7276 Msa1457100:CDS 45.0%
GGTTTGTCCTGGAAAAGCTA+TGG + tig0038452:7292-7311 Msa1457100:CDS 45.0%
TCCTGGAAAAGCTATGGGTT+TGG + tig0038452:7298-7317 Msa1457100:CDS 45.0%
GAAGAAACCACTTGTGTGCA+AGG + tig0038452:7427-7446 Msa1457100:CDS 45.0%
TTGTGTGCAAGGTTGTTCCA+AGG + tig0038452:7438-7457 Msa1457100:CDS 45.0%
AAGGTTGTTCCAAGGACCTA+GGG + tig0038452:7446-7465 Msa1457100:CDS 45.0%
ACCTAGGGCTAAGCTAATGT+TGG + tig0038452:7461-7480 Msa1457100:exon 45.0%
! ACCAACATTAGCTTAGCCCT+AGG - tig0038452:7465-7484 Msa1457100:intergenic 45.0%
GACATGGATATTGTGGGGTT+TGG + tig0038452:7518-7537 Msa1457100:three_prime_UTR 45.0%
CACCTGGTGTAAGCCAGAAA+AGG - tig0038452:5921-5940 Msa1457100:intergenic 50.0%
!!! CTTTTCTGGCTTACACCAGG+TGG + tig0038452:5919-5938 Msa1457100:CDS 50.0%
AGGGCCTGGAATAACAGACT+TGG - tig0038452:5983-6002 Msa1457100:intergenic 50.0%
! ATTCCAGGCCCTTCCTTTTC+TGG + tig0038452:5991-6010 Msa1457100:CDS 50.0%
AAACCAGAAAAGGAAGGGCC+TGG - tig0038452:5997-6016 Msa1457100:intergenic 50.0%
! ACGGTGACTCTTGGCTAGTT+TGG - tig0038452:6061-6080 Msa1457100:intergenic 50.0%
AAGCCATCAACGACTCAGCA+CGG - tig0038452:6080-6099 Msa1457100:intergenic 50.0%
! GCAATGGGGTTTGCTCCATA+TGG + tig0038452:6225-6244 Msa1457100:CDS 50.0%
!! CTCCATATGGAGAGTACTGG+AGG + tig0038452:6238-6257 Msa1457100:CDS 50.0%
! CCCATCTGTTTTGTCCTAGG+AGG + tig0038452:6283-6302 Msa1457100:CDS 50.0%
GGGTGATATGGGTAGTGTTG+AGG + tig0038452:6374-6393 Msa1457100:CDS 50.0%
!! TGGTGATGGTGTTGAGCTTG+AGG + tig0038452:6473-6492 Msa1457100:CDS 50.0%
! TGGTGTTGAGCTTGAGGAGT+TGG + tig0038452:6479-6498 Msa1457100:CDS 50.0%
!! CTTGAGGAGTTGGTGAGTGA+AGG + tig0038452:6489-6508 Msa1457100:CDS 50.0%
! GAGTGAAGGGTATGAGCTGT+TGG + tig0038452:6503-6522 Msa1457100:CDS 50.0%
GCCCATGATAAAAGTGGTCC+TGG - tig0038452:7071-7090 Msa1457100:intergenic 50.0%
GGTGACAAGCATGTTCCGAA+AGG + tig0038452:7119-7138 Msa1457100:CDS 50.0%
! ACCATTTGGAGCTGGTAGGA+GGG + tig0038452:7271-7290 Msa1457100:CDS 50.0%
! GCCAAACCCATAGCTTTTCC+AGG - tig0038452:7302-7321 Msa1457100:intergenic 50.0%
GGAACAACCTTGCACACAAG+TGG - tig0038452:7437-7456 Msa1457100:intergenic 50.0%
CAAGGTTGTTCCAAGGACCT+AGG + tig0038452:7445-7464 Msa1457100:CDS 50.0%
TTAGCTTAGCCCTAGGTCCT+TGG - tig0038452:7458-7477 Msa1457100:intergenic 50.0%
CACCTGGTGTAAGCCAGAAA+AGG - tig0038452:5921-5940 Msa1457100:intergenic 50.0%
!!! CTTTTCTGGCTTACACCAGG+TGG + tig0038452:5919-5938 Msa1457100:CDS 50.0%
AGGGCCTGGAATAACAGACT+TGG - tig0038452:5983-6002 Msa1457100:intergenic 50.0%
! ATTCCAGGCCCTTCCTTTTC+TGG + tig0038452:5991-6010 Msa1457100:CDS 50.0%
AAACCAGAAAAGGAAGGGCC+TGG - tig0038452:5997-6016 Msa1457100:intergenic 50.0%
! ACGGTGACTCTTGGCTAGTT+TGG - tig0038452:6061-6080 Msa1457100:intergenic 50.0%
AAGCCATCAACGACTCAGCA+CGG - tig0038452:6080-6099 Msa1457100:intergenic 50.0%
! GCAATGGGGTTTGCTCCATA+TGG + tig0038452:6225-6244 Msa1457100:CDS 50.0%
!! CTCCATATGGAGAGTACTGG+AGG + tig0038452:6238-6257 Msa1457100:CDS 50.0%
! CCCATCTGTTTTGTCCTAGG+AGG + tig0038452:6283-6302 Msa1457100:CDS 50.0%
GGGTGATATGGGTAGTGTTG+AGG + tig0038452:6374-6393 Msa1457100:CDS 50.0%
!! TGGTGATGGTGTTGAGCTTG+AGG + tig0038452:6473-6492 Msa1457100:CDS 50.0%
! TGGTGTTGAGCTTGAGGAGT+TGG + tig0038452:6479-6498 Msa1457100:CDS 50.0%
!! CTTGAGGAGTTGGTGAGTGA+AGG + tig0038452:6489-6508 Msa1457100:CDS 50.0%
! GAGTGAAGGGTATGAGCTGT+TGG + tig0038452:6503-6522 Msa1457100:CDS 50.0%
GCCCATGATAAAAGTGGTCC+TGG - tig0038452:7071-7090 Msa1457100:intergenic 50.0%
GGTGACAAGCATGTTCCGAA+AGG + tig0038452:7119-7138 Msa1457100:CDS 50.0%
! ACCATTTGGAGCTGGTAGGA+GGG + tig0038452:7271-7290 Msa1457100:CDS 50.0%
! GCCAAACCCATAGCTTTTCC+AGG - tig0038452:7302-7321 Msa1457100:intergenic 50.0%
GGAACAACCTTGCACACAAG+TGG - tig0038452:7437-7456 Msa1457100:intergenic 50.0%
CAAGGTTGTTCCAAGGACCT+AGG + tig0038452:7445-7464 Msa1457100:CDS 50.0%
TTAGCTTAGCCCTAGGTCCT+TGG - tig0038452:7458-7477 Msa1457100:intergenic 50.0%
AAGAGGGAGCGAGAGAGTTG+CGG - tig0038452:5721-5740 Msa0768440:intergenic 55.0%
! TTACACCAGGTGGGCTTGCT+TGG + tig0038452:5929-5948 Msa1457100:CDS 55.0%
! TACACCAGGTGGGCTTGCTT+GGG + tig0038452:5930-5949 Msa1457100:CDS 55.0%
TCACCGTGCTGAGTCGTTGA+TGG + tig0038452:6074-6093 Msa1457100:CDS 55.0%
! GCATTAAGGGTGCATCCACC+AGG + tig0038452:7050-7069 Msa1457100:CDS 55.0%
! AGGTTGGCACCATTTGGAGC+TGG + tig0038452:7263-7282 Msa1457100:CDS 55.0%
! TGGCACCATTTGGAGCTGGT+AGG + tig0038452:7267-7286 Msa1457100:CDS 55.0%
! CACCATTTGGAGCTGGTAGG+AGG + tig0038452:7270-7289 Msa1457100:CDS 55.0%
ACCCTCCTACCAGCTCCAAA+TGG - tig0038452:7275-7294 Msa1457100:intergenic 55.0%
GCGAGAGAGTTGCGGATGAA+AGG - tig0038452:5713-5732 Msa1457100:intergenic 55.0%
AAGAGGGAGCGAGAGAGTTG+CGG - tig0038452:5721-5740 Msa1457100:intergenic 55.0%
! TTACACCAGGTGGGCTTGCT+TGG + tig0038452:5929-5948 Msa1457100:CDS 55.0%
! TACACCAGGTGGGCTTGCTT+GGG + tig0038452:5930-5949 Msa1457100:CDS 55.0%
TCACCGTGCTGAGTCGTTGA+TGG + tig0038452:6074-6093 Msa1457100:CDS 55.0%
! GCATTAAGGGTGCATCCACC+AGG + tig0038452:7050-7069 Msa1457100:CDS 55.0%
! AGGTTGGCACCATTTGGAGC+TGG + tig0038452:7263-7282 Msa1457100:CDS 55.0%
! TGGCACCATTTGGAGCTGGT+AGG + tig0038452:7267-7286 Msa1457100:CDS 55.0%
! CACCATTTGGAGCTGGTAGG+AGG + tig0038452:7270-7289 Msa1457100:CDS 55.0%
ACCCTCCTACCAGCTCCAAA+TGG - tig0038452:7275-7294 Msa1457100:intergenic 55.0%
AAAGCCCAAGCAAGCCCACC+TGG - tig0038452:5937-5956 Msa1457100:intergenic 60.0%
CGACTCAGCACGGTGACTCT+TGG - tig0038452:6070-6089 Msa1457100:intergenic 60.0%
GCTGGTAGGAGGGTTTGTCC+TGG + tig0038452:7281-7300 Msa1457100:CDS 60.0%
AAAGCCCAAGCAAGCCCACC+TGG - tig0038452:5937-5956 Msa1457100:intergenic 60.0%
CGACTCAGCACGGTGACTCT+TGG - tig0038452:6070-6089 Msa1457100:intergenic 60.0%
GCTGGTAGGAGGGTTTGTCC+TGG + tig0038452:7281-7300 Msa1457100:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0038452 gene 5712 7803 5712 ID=Msa1457100;Name=Msa1457100
tig0038452 mRNA 5712 7803 5712 ID=Msa1457100-mRNA-1;Parent=Msa1457100;Name=Msa1457100-mRNA-1;_AED=0.02;_eAED=0.02;_QI=99|1|1|1|1|1|2|337|518
tig0038452 exon 5712 6764 5712 ID=Msa1457100-mRNA-1:exon:21010;Parent=Msa1457100-mRNA-1
tig0038452 exon 6864 7803 6864 ID=Msa1457100-mRNA-1:exon:21011;Parent=Msa1457100-mRNA-1
tig0038452 five_prime_UTR 5712 5810 5712 ID=Msa1457100-mRNA-1:five_prime_utr;Parent=Msa1457100-mRNA-1
tig0038452 CDS 5811 6764 5811 ID=Msa1457100-mRNA-1:cds;Parent=Msa1457100-mRNA-1
tig0038452 CDS 6864 7466 6864 ID=Msa1457100-mRNA-1:cds;Parent=Msa1457100-mRNA-1
tig0038452 three_prime_UTR 7467 7803 7467 ID=Msa1457100-mRNA-1:three_prime_utr;Parent=Msa1457100-mRNA-1
Gene Sequence

>Msa1457100

ATGTCTCCAGAATTTCATCTTCTTCTTTTCCCAGACCTTGTTTACTTTCATCCATTCACTCTCACTTTCCAAACTGCACTTTGCTTCTTTCTCTCTGTTCTTGGTTTCCTTTTCTGGCTTACACCAGGTGGGCTTGCTTGGGCTTTATATAATAAAGCTTCATCTTCAGCCAAGTCTGTTATTCCAGGCCCTTCCTTTTCTGGTTTGTTTGGTATTCTCTCAGGTCAAACACCACACCGTGTTTTAGCCAAACTAGCCAAGAGTCACCGTGCTGAGTCGTTGATGGCTTTTTCTGTTGGTTTAACCCGGTTCATTATTTCAAGTGAACCAGAAACTGCTAAAGAGATTCTTTGTAGTTCTGCTTTTGGTGATAGACCAGTGAAAGAGTCAGCTTACGAGCTTTTGTTTCATAGGGCAATGGGGTTTGCTCCATATGGAGAGTACTGGAGGAATTTGAGGAGGATTTCTTCAACCCATCTGTTTTGTCCTAGGAGGATTAACGGGTTTGAAGGTTTTAGGAGTGAGGTTGGTTTGAAAATGGTGGAGAGGATAGAGTTTTTGATGGGTGATATGGGTAGTGTTGAGGTGAAAAAAGTGCTTCATTTTGGATCACTTAATAATGTGATGATGACTGTGTTTGGGAAATGTTATGATTTCTTTGATGGTGATGGTGTTGAGCTTGAGGAGTTGGTGAGTGAAGGGTATGAGCTGTTGGGTGTTTTTAACTGGAGTGATCATTTTCCTCTTTTGGGTTGGTTAGATTTGCAGGGTGTTAGGAAAAGGTGTAGAGCTTTGGTGACAAAGGTTAATGCTTTTGTTGGAAAGATAATAGAGGAGCATAAGATGAAGAGAATGTCTGAAGGAAGGGCTATAGTTGGTGATTTTGTTGACGTTTTACTTGATTTGGAGGAAAAAGACAAGCTCAGTGATTCTGATATGATTGCAGTTCTTTGGGAAATGATTTTCAGAGGAACAGACACAGTAGCAATATTACTAGAATGGATTCTGGCTAGGATGGTGCTTCATCCAGAGATACAAGCAAAAGCACAAGAAGAAATTTACCGTGTTGTTGGAAATTCTAAAGTTATCACTGATGTTGATGTTCAAAAAATGTGTTACTTGCAATGCATTGTGAAAGAGGCATTAAGGGTGCATCCACCAGGACCACTTTTATCATGGGCACGTTTAGCTGTTCATGATGTTATGGTTGGTGACAAGCATGTTCCGAAAGGTACAACTGCTATGGTGAATATGTGGGCCATAACACATGATGAGATGGTGTGGGGTGAACCAGAAGAGTTTAAGCCAGAGAGGTTTATGAATGAGGATGTGAGTATAATGGGATCTGATTTGAGGTTGGCACCATTTGGAGCTGGTAGGAGGGTTTGTCCTGGAAAAGCTATGGGTTTGGCTTCTGTTCATCTTTGGCTTGCTCAGTTACTTCACAACTTCAAATGGGTTCCATATGATGATTCACCTGTTAATTTGGAGGAATGTCTTAAGCTTTCTATGGAGATGAAGAAACCACTTGTGTGCAAGGTTGTTCCAAGGACCTAG

Protein sequence

>Msa1457100

MSPEFHLLLFPDLVYFHPFTLTFQTALCFFLSVLGFLFWLTPGGLAWALYNKASSSAKSVIPGPSFSGLFGILSGQTPHRVLAKLAKSHRAESLMAFSVGLTRFIISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRSEVGLKMVERIEFLMGDMGSVEVKKVLHFGSLNNVMMTVFGKCYDFFDGDGVELEELVSEGYELLGVFNWSDHFPLLGWLDLQGVRKRCRALVTKVNAFVGKIIEEHKMKRMSEGRAIVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQEEIYRVVGNSKVITDVDVQKMCYLQCIVKEALRVHPPGPLLSWARLAVHDVMVGDKHVPKGTTAMVNMWAITHDEMVWGEPEEFKPERFMNEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASVHLWLAQLLHNFKWVPYDDSPVNLEECLKLSMEMKKPLVCKVVPRT*