AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0727260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0727260 MtrunA17_Chr5g0419451 97.674 516 12 0 1 516 1 516 0.0 1039
Msa0727260 MtrunA17_Chr8g0377341 52.015 521 230 9 5 517 17 525 0.0 519
Msa0727260 MtrunA17_Chr8g0346261 49.809 524 223 9 27 517 29 545 4.68e-170 491
Msa0727260 MtrunA17_Chr1g0200951 49.900 501 230 11 32 517 34 528 2.54e-157 458
Msa0727260 MtrunA17_Chr4g0058231 36.042 480 278 15 54 512 22 493 7.48e-87 276
Msa0727260 MtrunA17_Chr3g0086661 34.690 467 272 10 75 517 49 506 4.11e-81 261
Msa0727260 MtrunA17_Chr7g0255531 33.207 527 299 14 13 517 1 496 6.48e-81 261
Msa0727260 MtrunA17_Chr4g0061381 33.476 466 277 12 75 517 48 503 1.02e-80 260
Msa0727260 MtrunA17_Chr3g0086651 34.475 467 273 10 75 517 49 506 5.46e-80 259
Msa0727260 MtrunA17_Chr3g0116741 35.491 448 265 11 75 508 68 505 7.35e-80 258
Msa0727260 MtrunA17_Chr4g0058201 34.304 481 288 16 54 516 22 492 1.31e-79 257
Msa0727260 MtrunA17_Chr3g0094171 32.157 510 315 13 24 517 13 507 3.26e-79 257
Msa0727260 MtrunA17_Chr3g0086691 32.265 468 282 12 75 517 49 506 1.01e-77 253
Msa0727260 MtrunA17_Chr4g0047661 32.490 514 315 13 16 512 14 512 1.15e-77 253
Msa0727260 MtrunA17_Chr4g0058191 33.333 477 300 12 50 516 19 487 1.34e-77 252
Msa0727260 MtrunA17_Chr4g0047691 33.528 513 309 16 16 512 14 510 1.48e-75 247
Msa0727260 MtrunA17_Chr4g0047641 31.931 523 321 15 12 512 2 511 6.96e-75 245
Msa0727260 MtrunA17_Chr3g0116681 30.920 511 312 17 27 518 16 504 7.52e-75 245
Msa0727260 MtrunA17_Chr5g0403351 31.048 496 304 13 24 497 2 481 1.04e-74 244
Msa0727260 MtrunA17_Chr6g0484841 32.150 479 289 14 62 518 39 503 1.61e-74 244
Msa0727260 MtrunA17_Chr8g0344151 32.839 472 296 9 62 517 38 504 2.12e-74 244
Msa0727260 MtrunA17_Chr1g0174481 30.723 498 329 9 32 517 6 499 4.48e-74 243
Msa0727260 MtrunA17_Chr4g0047631 32.708 480 295 15 50 512 39 507 3.66e-73 241
Msa0727260 MtrunA17_Chr2g0310391 31.746 504 317 13 27 517 4 493 5.62e-73 240
Msa0727260 MtrunA17_Chr8g0390881 31.028 506 318 12 29 516 9 501 7.20e-73 240
Msa0727260 MtrunA17_Chr7g0235551 32.745 510 308 14 32 516 7 506 1.32e-72 239
Msa0727260 MtrunA17_Chr2g0310381 31.950 482 303 12 27 497 4 471 1.41e-72 239
Msa0727260 MtrunA17_Chr3g0082701 31.579 532 315 16 20 517 7 523 2.81e-72 239
Msa0727260 MtrunA17_Chr1g0174471 31.176 510 316 14 32 517 22 520 3.02e-72 239
Msa0727260 MtrunA17_Chr6g0484811 34.468 470 281 14 62 512 39 500 1.57e-71 236
Msa0727260 MtrunA17_Chr8g0344181 32.839 472 296 9 62 517 40 506 2.10e-71 236
Msa0727260 MtrunA17_Chr3g0101711 32.054 521 311 16 12 512 2 499 3.11e-71 236
Msa0727260 MtrunA17_Chr3g0094231 32.000 475 305 10 55 517 31 499 3.81e-71 235
Msa0727260 MtrunA17_Chr4g0058281 31.250 496 318 13 37 515 23 512 4.46e-71 235
Msa0727260 MtrunA17_Chr6g0451781 33.065 496 298 14 50 517 66 555 1.53e-70 235
Msa0727260 MtrunA17_Chr7g0254641 30.561 481 304 11 62 517 39 514 1.58e-70 234
Msa0727260 MtrunA17_Chr4g0020041 32.806 506 308 15 29 516 8 499 3.63e-70 233
Msa0727260 MtrunA17_Chr8g0382901 32.438 484 308 11 44 516 476 951 9.93e-70 240
Msa0727260 MtrunA17_Chr8g0382901 31.013 474 295 10 53 516 21 472 1.15e-67 234
Msa0727260 MtrunA17_Chr4g0035921 32.328 464 275 15 62 497 39 491 1.48e-69 231
Msa0727260 MtrunA17_Chr1g0156101 31.717 495 301 17 52 517 24 510 1.53e-69 231
Msa0727260 MtrunA17_Chr1g0174451 29.447 506 325 12 34 517 10 505 1.81e-69 231
Msa0727260 MtrunA17_Chr2g0296651 30.495 505 318 11 27 516 5 491 2.06e-69 231
Msa0727260 MtrunA17_Chr3g0084921 32.432 481 283 14 62 512 37 505 4.06e-69 230
Msa0727260 MtrunA17_Chr4g0011921 31.890 508 310 13 19 510 2 489 5.97e-69 229
Msa0727260 MtrunA17_Chr4g0058261 31.276 486 314 10 47 515 49 531 6.96e-69 230
Msa0727260 MtrunA17_Chr5g0403331 30.661 499 307 16 19 497 3 482 1.39e-68 228
Msa0727260 MtrunA17_Chr8g0344191 31.857 474 299 10 62 517 71 538 4.61e-68 228
Msa0727260 MtrunA17_Chr3g0101651 33.259 451 268 12 56 486 34 471 4.98e-68 227
Msa0727260 MtrunA17_Chr3g0101621 32.172 488 295 16 27 499 5 471 5.03e-68 227
Msa0727260 MtrunA17_Chr8g0372251 33.708 445 265 11 62 486 37 471 7.76e-68 227
Msa0727260 MtrunA17_Chr1g0160851 29.684 475 324 7 49 516 23 494 8.20e-68 226
Msa0727260 MtrunA17_Chr3g0101691 32.465 499 284 16 12 486 2 471 9.09e-68 226
Msa0727260 MtrunA17_Chr5g0395321 31.410 468 298 9 29 486 9 463 9.90e-68 227
Msa0727260 MtrunA17_Chr1g0197851 31.373 459 276 13 48 486 22 461 1.41e-67 225
Msa0727260 MtrunA17_Chr6g0451641 31.670 521 320 17 21 516 5 514 1.83e-67 226
Msa0727260 MtrunA17_Chr5g0405001 31.828 465 269 14 62 497 46 491 1.95e-67 226
Msa0727260 MtrunA17_Chr3g0101601 31.526 498 294 17 20 497 5 475 2.20e-67 225
Msa0727260 MtrunA17_Chr5g0430081 30.390 487 305 13 29 497 10 480 3.30e-67 225
Msa0727260 MtrunA17_Chr1g0162811 30.297 505 322 13 29 516 6 497 3.77e-67 224
Msa0727260 MtrunA17_Chr4g0011901 33.100 429 272 11 94 510 64 489 3.94e-67 224
Msa0727260 MtrunA17_Chr7g0246221 31.111 450 289 12 52 486 26 469 4.41e-67 224
Msa0727260 MtrunA17_Chr3g0101701 32.056 496 290 15 12 486 2 471 4.70e-67 224
Msa0727260 MtrunA17_Chr6g0472311 30.664 512 324 14 30 516 11 516 4.74e-67 225
Msa0727260 MtrunA17_Chr1g0197891 31.910 445 264 13 62 486 36 461 5.17e-67 224
Msa0727260 MtrunA17_Chr1g0197881 31.910 445 264 13 62 486 35 460 9.20e-67 223
Msa0727260 MtrunA17_Chr1g0197871 29.854 479 296 12 25 486 6 461 1.57e-66 223
Msa0727260 MtrunA17_Chr8g0356001 31.770 469 298 12 62 516 43 503 2.38e-66 223
Msa0727260 MtrunA17_Chr4g0039391 32.444 450 287 10 79 517 56 499 2.51e-66 223
Msa0727260 MtrunA17_Chr5g0445441 30.208 480 307 13 21 486 42 507 2.76e-66 223
Msa0727260 MtrunA17_Chr1g0200961 31.224 474 306 10 58 516 26 494 2.96e-66 222
Msa0727260 MtrunA17_Chr3g0101661 31.481 486 292 14 22 486 5 470 3.57e-66 223
Msa0727260 MtrunA17_Chr4g0046631 32.265 468 292 13 68 517 57 517 9.17e-66 221
Msa0727260 MtrunA17_Chr7g0258221 29.762 504 330 10 32 517 7 504 1.00e-65 221
Msa0727260 MtrunA17_Chr3g0101731 31.963 438 269 13 64 486 44 467 1.64e-65 220
Msa0727260 MtrunA17_Chr5g0445461 30.353 481 305 12 21 486 1 466 2.01e-65 220
Msa0727260 MtrunA17_Chr3g0101631 32.043 465 285 15 49 497 25 474 2.03e-65 220
Msa0727260 MtrunA17_Chr5g0430131 30.392 510 322 14 25 516 6 500 2.04e-65 220
Msa0727260 MtrunA17_Chr5g0431641 30.962 478 292 14 25 486 11 466 2.69e-65 220
Msa0727260 MtrunA17_Chr3g0101581 29.216 510 336 13 21 516 1 499 3.27e-65 219
Msa0727260 MtrunA17_Chr5g0403321 29.661 472 301 12 48 497 22 484 3.49e-65 219
Msa0727260 MtrunA17_Chr8g0362701 30.323 465 294 13 73 517 50 504 4.35e-65 219
Msa0727260 MtrunA17_Chr6g0451691 31.309 527 313 14 21 516 17 525 5.52e-65 220
Msa0727260 MtrunA17_Chr1g0174441 31.006 487 307 14 51 517 49 526 5.69e-65 219
Msa0727260 MtrunA17_Chr1g0164211 30.835 467 303 13 62 516 33 491 6.53e-65 218
Msa0727260 MtrunA17_Chr1g0205361 28.118 473 328 7 47 510 21 490 6.93e-65 218
Msa0727260 MtrunA17_Chr2g0296661 32.244 459 275 12 79 516 53 496 6.98e-65 219
Msa0727260 MtrunA17_Chr2g0314721 29.072 485 317 14 15 486 4 474 7.87e-65 218
Msa0727260 MtrunA17_Chr4g0011961 31.293 441 285 11 82 510 54 488 8.75e-65 218
Msa0727260 MtrunA17_Chr7g0246121 28.761 452 307 8 75 515 51 498 1.12e-64 218
Msa0727260 MtrunA17_Chr6g0451751 32.882 517 302 16 27 516 23 521 1.48e-64 218
Msa0727260 MtrunA17_Chr1g0205371 31.169 462 308 7 62 516 37 495 1.74e-64 218
Msa0727260 MtrunA17_Chr5g0430091 31.141 517 319 15 19 516 3 501 2.10e-64 218
Msa0727260 MtrunA17_Chr5g0395331 31.504 492 301 15 46 516 26 502 2.37e-64 217
Msa0727260 MtrunA17_Chr4g0057001 30.083 482 317 9 49 517 39 513 2.71e-64 218
Msa0727260 MtrunA17_Chr3g0101611 30.608 477 303 12 52 510 30 496 3.46e-64 217
Msa0727260 MtrunA17_Chr3g0101721 30.193 467 293 14 64 511 45 497 4.73e-64 216
Msa0727260 MtrunA17_Chr2g0304871 31.463 499 310 14 45 517 21 513 6.26e-64 217
Msa0727260 MtrunA17_Chr5g0395381 29.724 508 306 13 18 516 5 470 8.40e-64 215
Msa0727260 MtrunA17_Chr5g0430101 30.078 512 318 17 25 516 7 498 1.25e-63 215
Msa0727260 MtrunA17_Chr5g0446161 28.306 484 307 13 54 516 35 499 1.69e-63 215
Msa0727260 MtrunA17_Chr3g0101571 29.960 494 317 15 33 510 12 492 1.91e-63 215
Msa0727260 MtrunA17_Chr7g0218611 31.873 411 250 10 94 486 68 466 2.01e-63 215
Msa0727260 MtrunA17_Chr8g0339311 28.679 530 344 14 12 517 2 521 2.44e-63 215
Msa0727260 MtrunA17_Chr4g0030701 30.786 458 286 9 88 517 63 517 2.81e-63 215
Msa0727260 MtrunA17_Chr6g0463791 30.658 486 304 13 30 497 7 477 3.15e-63 214
Msa0727260 MtrunA17_Chr8g0362481 29.412 442 286 11 95 517 1 435 4.60e-63 212
Msa0727260 MtrunA17_Chr6g0463801 29.979 477 311 12 52 516 29 494 6.57e-63 213
Msa0727260 MtrunA17_Chr1g0174461 31.624 468 293 14 68 517 46 504 8.54e-63 213
Msa0727260 MtrunA17_Chr8g0361471 31.429 455 269 14 57 486 31 467 1.43e-62 213
Msa0727260 MtrunA17_Chr7g0265611 31.276 486 306 12 52 517 38 515 1.48e-62 213
Msa0727260 MtrunA17_Chr6g0466941 31.337 501 306 16 49 517 22 516 1.58e-62 213
Msa0727260 MtrunA17_Chr4g0039901 29.954 434 290 8 62 486 37 465 2.24e-62 212
Msa0727260 MtrunA17_Chr8g0339331 31.172 478 303 13 62 517 40 513 9.44e-62 211
Msa0727260 MtrunA17_Chr4g0076161 29.817 493 303 14 30 497 7 481 9.97e-62 210
Msa0727260 MtrunA17_Chr5g0445451 29.707 478 312 12 21 486 1 466 1.02e-61 210
Msa0727260 MtrunA17_Chr3g0101671 31.385 462 274 14 50 486 28 471 1.12e-61 210
Msa0727260 MtrunA17_Chr5g0430031 28.684 509 331 13 25 516 8 501 1.14e-61 210
Msa0727260 MtrunA17_Chr4g0052861 28.487 509 321 13 27 516 7 491 1.38e-61 210
Msa0727260 MtrunA17_Chr5g0401681 28.429 503 328 12 28 514 3 489 1.78e-61 209
Msa0727260 MtrunA17_Chr4g0008101 30.483 538 328 17 8 517 3 522 2.52e-61 210
Msa0727260 MtrunA17_Chr4g0030711 29.194 459 293 9 88 517 65 520 6.41e-61 209
Msa0727260 MtrunA17_Chr6g0465511 31.429 455 269 14 57 486 31 467 7.78e-61 208
Msa0727260 MtrunA17_Chr4g0056951 31.264 451 291 11 79 517 65 508 8.43e-61 208
Msa0727260 MtrunA17_Chr3g0101821 30.544 478 300 14 27 486 4 467 1.18e-60 207
Msa0727260 MtrunA17_Chr7g0218601 30.846 402 264 8 94 486 69 465 1.21e-60 207
Msa0727260 MtrunA17_Chr6g0451741 30.697 531 320 14 13 517 36 544 2.10e-60 208
Msa0727260 MtrunA17_Chr5g0431671 29.336 467 306 12 64 517 46 501 2.28e-60 207
Msa0727260 MtrunA17_Chr4g0011981 31.235 429 280 9 94 510 64 489 2.63e-60 206
Msa0727260 MtrunA17_Chr5g0445531 30.649 447 285 11 53 486 31 465 4.30e-60 206
Msa0727260 MtrunA17_Chr3g0101761 31.237 477 297 14 51 508 26 490 5.31e-60 206
Msa0727260 MtrunA17_Chr6g0466331 31.429 455 269 14 57 486 31 467 6.35e-60 206
Msa0727260 MtrunA17_Chr2g0314731 28.785 469 307 16 48 501 21 477 1.01e-59 204
Msa0727260 MtrunA17_Chr3g0101811 31.124 498 288 19 58 516 39 520 1.12e-59 205
Msa0727260 MtrunA17_Chr5g0446151 28.283 495 302 15 52 516 29 500 1.41e-59 204
Msa0727260 MtrunA17_Chr7g0246151 29.439 428 278 10 75 487 51 469 2.13e-59 204
Msa0727260 MtrunA17_Chr1g0176831 29.360 453 296 13 48 486 51 493 2.28e-59 204
Msa0727260 MtrunA17_Chr1g0167321 31.631 509 311 15 29 516 5 497 2.79e-59 204
Msa0727260 MtrunA17_Chr1g0156081 31.098 492 308 14 52 517 48 534 3.24e-59 204
Msa0727260 MtrunA17_Chr3g0101751 30.508 472 298 13 29 486 19 474 3.49e-59 204
Msa0727260 MtrunA17_Chr4g0053621 31.635 373 236 6 137 498 111 475 4.11e-59 203
Msa0727260 MtrunA17_Chr8g0355961 30.309 518 318 18 20 516 8 503 6.23e-59 203
Msa0727260 MtrunA17_Chr4g0052881 30.990 384 244 6 137 510 112 484 1.38e-58 202
Msa0727260 MtrunA17_Chr6g0466901 30.847 496 305 16 54 517 26 515 1.52e-58 202
Msa0727260 MtrunA17_Chr7g0224561 28.131 519 326 12 32 517 4 508 1.97e-58 202
Msa0727260 MtrunA17_Chr1g0162801 30.237 506 324 12 29 516 6 500 2.74e-58 201
Msa0727260 MtrunA17_Chr3g0101801 29.752 484 309 14 52 516 34 505 2.80e-58 201
Msa0727260 MtrunA17_Chr7g0224551 27.799 518 329 12 32 517 4 508 6.74e-58 201
Msa0727260 MtrunA17_Chr5g0401691 32.368 380 243 8 143 516 137 508 7.88e-58 200
Msa0727260 MtrunA17_Chr5g0419691 30.137 438 287 10 62 486 31 462 2.63e-57 198
Msa0727260 MtrunA17_Chr7g0246181 29.039 458 300 9 75 515 51 500 3.87e-57 198
Msa0727260 MtrunA17_Chr7g0258211 29.505 444 288 10 88 512 67 504 4.43e-57 198
Msa0727260 MtrunA17_Chr4g0074581 28.906 512 328 13 30 518 45 543 6.47e-57 198
Msa0727260 MtrunA17_Chr8g0357421 32.543 464 284 16 64 511 45 495 6.63e-57 197
Msa0727260 MtrunA17_Chr5g0431511 28.676 408 281 5 88 486 62 468 1.07e-56 197
Msa0727260 MtrunA17_Chr4g0024771 26.719 509 345 11 20 518 9 499 2.00e-56 196
Msa0727260 MtrunA17_Chr5g0445381 30.174 517 323 19 17 517 37 531 2.92e-56 196
Msa0727260 MtrunA17_Chr1g0207841 28.761 452 290 10 94 517 72 519 3.05e-56 196
Msa0727260 MtrunA17_Chr4g0011881 30.508 472 298 15 62 514 32 492 1.25e-55 194
Msa0727260 MtrunA17_Chr4g0052851 29.299 471 303 14 58 516 31 483 1.42e-55 194
Msa0727260 MtrunA17_Chr4g0011871 29.613 439 289 11 62 486 31 463 2.76e-55 193
Msa0727260 MtrunA17_Chr7g0246131 29.646 452 292 13 54 487 28 471 4.38e-55 192
Msa0727260 MtrunA17_Chr5g0431501 28.641 412 276 8 88 486 62 468 4.42e-55 192
Msa0727260 MtrunA17_Chr5g0431461 28.641 412 276 8 88 486 62 468 4.42e-55 192
Msa0727260 MtrunA17_Chr6g0458561 29.522 481 304 14 62 517 56 526 5.75e-55 193
Msa0727260 MtrunA17_Chr4g0017411 29.299 471 303 13 58 516 28 480 6.62e-55 192
Msa0727260 MtrunA17_Chr5g0406651 30.068 439 286 10 62 486 32 463 7.04e-55 192
Msa0727260 MtrunA17_Chr8g0357431 30.870 460 290 14 64 508 45 491 8.02e-55 192
Msa0727260 MtrunA17_Chr3g0101741 29.002 431 278 12 95 511 1 417 1.02e-53 187
Msa0727260 MtrunA17_Chr5g0445421 28.151 476 283 13 30 486 84 519 1.05e-53 190
Msa0727260 MtrunA17_Chr1g0213671 29.263 475 310 12 62 516 36 504 1.43e-53 189
Msa0727260 MtrunA17_Chr3g0101831 30.023 443 283 11 58 486 39 468 3.07e-51 182
Msa0727260 MtrunA17_Chr1g0160861 32.132 333 210 8 190 516 13 335 9.22e-51 177
Msa0727260 MtrunA17_Chr5g0430071 33.540 322 193 9 208 516 41 354 9.36e-51 177
Msa0727260 MtrunA17_Chr2g0280261 30.021 473 306 13 52 510 26 487 8.76e-50 178
Msa0727260 MtrunA17_Chr8g0351801 29.691 421 262 11 121 512 98 513 3.05e-49 177
Msa0727260 MtrunA17_Chr4g0058211 40.594 202 118 2 317 517 16 216 5.00e-49 168
Msa0727260 MtrunA17_Chr2g0280081 30.918 414 267 9 119 517 595 1004 8.94e-49 181
Msa0727260 MtrunA17_Chr2g0280081 28.678 401 267 9 119 504 94 490 2.84e-42 162
Msa0727260 MtrunA17_Chr5g0432751 28.764 445 293 14 62 488 35 473 1.91e-48 174
Msa0727260 MtrunA17_Chr5g0430111 29.385 439 271 15 25 443 8 427 2.63e-48 172
Msa0727260 MtrunA17_Chr1g0198191 27.290 524 339 18 14 517 14 515 3.78e-48 174
Msa0727260 MtrunA17_Chr8g0387101 29.372 446 285 13 94 517 69 506 5.30e-47 171
Msa0727260 MtrunA17_Chr2g0280121 30.641 421 261 14 119 517 98 509 6.31e-47 171
Msa0727260 MtrunA17_Chr5g0431591 32.700 263 167 4 231 486 25 284 1.08e-46 165
Msa0727260 MtrunA17_Chr1g0210091 27.460 437 293 13 79 498 87 516 2.87e-46 169
Msa0727260 MtrunA17_Chr4g0046321 25.304 494 326 13 53 518 24 502 5.75e-46 168
Msa0727260 MtrunA17_Chr4g0046351 25.152 493 326 12 53 517 24 501 1.88e-45 167
Msa0727260 MtrunA17_Chr3g0107541 27.727 440 291 14 99 517 92 525 2.43e-45 167
Msa0727260 MtrunA17_Chr4g0046331 23.930 514 353 12 27 517 5 503 3.13e-45 166
Msa0727260 MtrunA17_Chr2g0280071 29.540 413 274 8 119 517 127 536 4.28e-45 169
Msa0727260 MtrunA17_Chr1g0174431 37.681 207 118 3 320 517 1 205 5.09e-45 157
Msa0727260 MtrunA17_Chr6g0451681 38.115 244 142 6 281 516 232 474 5.79e-45 164
Msa0727260 MtrunA17_Chr6g0451771 38.182 220 130 3 302 516 1 219 7.44e-45 157
Msa0727260 MtrunA17_Chr3g0107611 25.872 545 355 16 8 517 1 531 2.69e-44 164
Msa0727260 MtrunA17_Chr1g0156061 26.708 483 272 13 52 516 47 465 3.51e-44 162
Msa0727260 MtrunA17_Chr2g0280041 28.814 413 277 7 119 517 126 535 3.28e-43 160
Msa0727260 MtrunA17_Chr8g0370641 26.096 502 337 16 45 517 22 518 1.12e-42 159
Msa0727260 MtrunA17_Chr6g0451811 38.235 204 123 2 316 517 1 203 1.78e-42 150
Msa0727260 MtrunA17_Chr8g0370651 26.316 494 332 16 51 517 34 522 1.81e-42 159
Msa0727260 MtrunA17_Chr8g0364651 29.147 422 257 16 120 517 95 498 2.07e-42 158
Msa0727260 MtrunA17_Chr8g0390871 36.406 217 133 4 303 516 9 223 1.71e-41 148
Msa0727260 MtrunA17_Chr5g0409051 28.182 440 278 17 104 517 81 508 3.52e-40 152
Msa0727260 MtrunA17_Chr4g0046681 37.500 200 122 2 320 517 31 229 6.14e-40 144
Msa0727260 MtrunA17_Chr2g0280011 38.785 214 119 5 313 517 1 211 8.94e-40 143
Msa0727260 MtrunA17_Chr5g0413911 27.635 427 283 11 116 517 103 528 1.22e-39 150
Msa0727260 MtrunA17_Chr4g0011941 38.922 167 101 1 320 486 1 166 1.22e-39 142
Msa0727260 MtrunA17_Chr4g0011851 36.111 180 114 1 307 486 3 181 7.41e-39 141
Msa0727260 MtrunA17_Chr2g0280061 37.850 214 121 5 313 517 1 211 3.75e-38 139
Msa0727260 MtrunA17_Chr2g0310351 36.842 190 118 2 320 508 1 189 8.14e-38 137
Msa0727260 MtrunA17_Chr5g0402981 36.126 191 118 3 330 517 2 191 5.37e-37 135
Msa0727260 MtrunA17_Chr3g0115011 85.135 74 11 0 440 513 1 74 1.61e-36 130
Msa0727260 MtrunA17_Chr4g0046661 36.321 212 130 3 310 517 13 223 2.78e-35 132
Msa0727260 MtrunA17_Chr5g0446101 28.137 263 176 4 230 486 24 279 2.99e-35 134
Msa0727260 MtrunA17_Chr6g0463621 35.673 171 104 2 320 486 1 169 2.84e-33 125
Msa0727260 MtrunA17_Chr2g0314781 33.133 166 109 2 336 501 1 164 5.43e-33 124
Msa0727260 MtrunA17_Chr5g0445351 40.426 141 83 1 346 486 50 189 1.18e-32 124
Msa0727260 MtrunA17_Chr3g0101591 31.188 202 137 2 318 518 37 237 1.46e-32 124
Msa0727260 MtrunA17_Chr2g0334021 22.594 478 335 16 60 518 38 499 4.68e-32 129
Msa0727260 MtrunA17_Chr3g0107551 31.373 204 132 4 319 517 4 204 1.85e-31 120
Msa0727260 MtrunA17_Chr5g0445761 39.521 167 100 1 320 486 1 166 1.94e-31 120
Msa0727260 MtrunA17_Chr5g0430041 39.333 150 88 3 350 497 5 153 3.95e-31 119
Msa0727260 MtrunA17_Chr8g0364631 25.651 499 320 17 54 518 26 507 1.19e-30 125
Msa0727260 MtrunA17_Chr3g0117301 43.966 116 64 1 371 486 1 115 2.48e-30 114
Msa0727260 MtrunA17_Chr5g0445371 33.333 216 105 5 276 486 15 196 2.76e-30 118
Msa0727260 MtrunA17_Chr3g0105761 33.163 196 123 6 326 517 6 197 4.49e-30 117
Msa0727260 MtrunA17_Chr6g0477081 30.859 256 158 6 180 431 1 241 1.40e-29 116
Msa0727260 MtrunA17_Chr5g0423621 34.615 182 115 3 336 516 1 179 2.07e-29 114
Msa0727260 MtrunA17_Chr3g0086681 43.846 130 68 2 361 486 6 134 2.07e-29 114
Msa0727260 MtrunA17_Chr2g0313771 25.935 401 268 13 100 486 109 494 1.10e-28 119
Msa0727260 MtrunA17_Chr4g0046701 36.709 158 97 2 362 517 1 157 1.80e-28 111
Msa0727260 MtrunA17_Chr5g0444981 35.802 162 102 2 325 486 16 175 2.25e-27 109
Msa0727260 MtrunA17_Chr3g0116731 43.571 140 66 4 371 510 1 127 3.73e-27 106
Msa0727260 MtrunA17_Chr5g0430151 38.406 138 83 2 350 486 5 141 5.00e-27 107
Msa0727260 MtrunA17_Chr8g0351391 24.036 441 278 17 79 486 65 481 2.75e-25 109
Msa0727260 MtrunA17_Chr7g0215181 26.629 353 229 14 146 487 148 481 1.31e-24 107
Msa0727260 MtrunA17_Chr2g0313761 24.299 428 293 14 73 484 68 480 3.05e-24 105
Msa0727260 MtrunA17_Chr3g0101541 39.496 119 71 1 368 486 1 118 3.54e-24 98.2
Msa0727260 MtrunA17_Chr6g0457421 25.215 349 239 12 146 487 146 479 1.22e-23 104
Msa0727260 MtrunA17_Chr5g0445361 46.739 92 49 0 395 486 12 103 1.60e-23 96.3
Msa0727260 MtrunA17_Chr0c19g0493771 23.628 419 275 15 100 493 227 625 2.13e-23 104
Msa0727260 MtrunA17_Chr8g0354571 24.311 399 274 12 100 484 109 493 5.85e-23 102
Msa0727260 MtrunA17_Chr4g0030741 29.965 287 173 8 69 343 79 349 7.94e-23 100
Msa0727260 MtrunA17_Chr8g0351311 24.306 432 289 19 79 486 65 482 1.84e-22 100
Msa0727260 MtrunA17_Chr4g0028321 43.689 103 56 2 397 497 33 135 1.86e-22 94.0
Msa0727260 MtrunA17_Chr1g0203141 27.948 229 153 5 262 484 262 484 2.04e-22 100
Msa0727260 MtrunA17_Chr1g0204271 24.379 443 278 20 79 485 56 477 3.06e-22 100
Msa0727260 MtrunA17_Chr2g0313791 23.502 434 289 15 73 486 72 482 4.60e-22 99.4
Msa0727260 MtrunA17_Chr4g0046691 29.412 255 157 8 68 312 50 291 5.32e-22 96.7
Msa0727260 MtrunA17_Chr4g0046671 26.978 278 179 9 54 312 35 307 5.38e-22 96.7
Msa0727260 MtrunA17_Chr1g0179811 25.352 426 259 15 97 488 114 514 7.96e-22 99.0
Msa0727260 MtrunA17_Chr2g0313821 24.941 421 281 15 79 484 85 485 1.13e-21 98.2
Msa0727260 MtrunA17_Chr6g0451801 28.076 317 197 10 21 314 8 316 1.79e-21 95.5
Msa0727260 MtrunA17_Chr8g0381571 23.326 463 299 15 40 488 43 463 1.80e-21 97.4
Msa0727260 MtrunA17_Chr5g0445751 29.333 300 190 12 17 307 3 289 2.11e-21 95.1
Msa0727260 MtrunA17_Chr2g0288661 23.367 398 279 12 100 484 103 487 2.68e-21 97.1
Msa0727260 MtrunA17_Chr2g0313751 24.186 430 291 14 73 484 100 512 4.20e-21 96.7
Msa0727260 MtrunA17_Chr6g0472221 31.868 182 116 4 308 486 321 497 4.47e-21 96.7
Msa0727260 MtrunA17_Chr2g0313831 24.706 425 277 16 79 484 85 485 7.36e-21 95.9
Msa0727260 MtrunA17_Chr8g0381541 23.160 462 299 15 38 485 41 460 7.60e-21 95.5
Msa0727260 MtrunA17_Chr5g0402971 29.603 277 178 10 51 314 37 309 8.73e-21 93.2
Msa0727260 MtrunA17_Chr5g0396521 23.909 481 297 20 93 518 105 571 1.29e-20 95.1
Msa0727260 MtrunA17_Chr2g0313801 25.625 320 212 11 180 484 177 485 1.30e-20 95.1
Msa0727260 MtrunA17_Chr3g0135841 27.711 249 169 5 266 505 280 526 1.81e-20 94.7
Msa0727260 MtrunA17_Chr2g0313781 23.303 442 293 15 73 484 72 497 2.17e-20 94.4
Msa0727260 MtrunA17_Chr4g0004601 23.515 404 275 14 97 484 115 500 2.26e-20 94.4
Msa0727260 MtrunA17_Chr1g0184421 22.843 394 275 13 142 518 124 505 2.71e-20 94.0
Msa0727260 MtrunA17_Chr4g0063221 31.579 171 112 3 322 489 327 495 3.11e-20 94.0
Msa0727260 MtrunA17_Chr2g0293411 24.846 487 293 19 33 485 11 458 3.17e-20 93.6
Msa0727260 MtrunA17_Chr2g0313811 22.877 424 286 14 89 486 91 499 3.56e-20 93.6
Msa0727260 MtrunA17_Chr1g0203151 33.735 166 102 4 322 484 320 480 7.13e-20 92.8
Msa0727260 MtrunA17_Chr1g0151221 29.268 246 159 8 283 518 289 529 9.27e-20 92.4
Msa0727260 MtrunA17_Chr4g0076171 31.953 169 86 4 336 497 1 147 1.35e-19 86.3
Msa0727260 MtrunA17_Chr1g0174421 26.490 302 201 7 36 322 23 318 1.38e-19 90.1
Msa0727260 MtrunA17_Chr7g0262111 24.115 452 300 14 61 486 42 476 1.45e-19 91.7
Msa0727260 MtrunA17_Chr1g0176851 23.176 233 177 1 144 374 2 234 1.81e-19 87.8
Msa0727260 MtrunA17_Chr2g0293421 24.103 390 260 12 105 485 97 459 2.10e-19 91.3
Msa0727260 MtrunA17_Chr7g0260821 23.833 407 275 15 102 488 83 474 2.62e-19 90.9
Msa0727260 MtrunA17_Chr2g0307291 23.373 415 282 13 87 484 92 487 2.93e-19 90.9
Msa0727260 MtrunA17_Chr7g0235261 23.358 411 269 16 97 485 94 480 3.79e-19 90.5
Msa0727260 MtrunA17_Chr8g0339861 28.761 226 144 7 268 485 241 457 5.25e-19 89.7
Msa0727260 MtrunA17_Chr1g0184461 21.442 527 361 16 21 517 1 504 5.80e-19 89.7
Msa0727260 MtrunA17_Chr8g0354511 24.500 400 272 14 100 484 109 493 6.41e-19 89.7
Msa0727260 MtrunA17_Chr6g0449341 24.490 441 288 20 79 484 102 532 7.65e-19 89.7
Msa0727260 MtrunA17_Chr5g0446131 22.596 416 286 14 86 484 87 483 1.46e-18 88.6
Msa0727260 MtrunA17_Chr6g0449331 24.766 428 248 19 142 517 110 515 1.48e-18 88.6
Msa0727260 MtrunA17_Chr7g0260831 24.880 418 257 20 102 488 82 473 1.62e-18 88.6
Msa0727260 MtrunA17_Chr3g0128461 23.677 359 237 12 146 486 156 495 1.86e-18 88.6
Msa0727260 MtrunA17_Chr2g0307301 23.855 415 280 14 87 484 92 487 1.95e-18 88.2
Msa0727260 MtrunA17_Chr7g0226771 25.714 245 159 9 256 494 225 452 3.24e-18 87.4
Msa0727260 MtrunA17_Chr3g0141801 29.344 259 152 10 247 492 220 460 6.87e-18 86.7
Msa0727260 MtrunA17_Chr8g0372591 28.889 135 92 2 319 453 2 132 7.51e-18 80.5
Msa0727260 MtrunA17_Chr6g0479681 29.609 179 108 4 322 484 322 498 7.67e-18 86.7
Msa0727260 MtrunA17_Chr4g0004481 27.477 222 148 6 275 484 241 461 1.50e-17 85.5
Msa0727260 MtrunA17_Chr8g0362731 29.762 168 114 3 320 486 215 379 1.68e-17 84.7
Msa0727260 MtrunA17_Chr8g0351401 23.873 377 239 13 142 486 120 480 1.80e-17 85.1
Msa0727260 MtrunA17_Chr3g0116721 31.053 190 121 6 164 345 2 189 4.04e-17 79.7
Msa0727260 MtrunA17_Chr1g0163451 27.273 220 151 5 305 518 309 525 4.95e-17 84.0
Msa0727260 MtrunA17_Chr5g0443401 23.134 268 189 7 224 486 194 449 5.77e-17 83.6
Msa0727260 MtrunA17_Chr8g0387001 26.515 264 170 8 269 517 251 505 7.26e-17 83.6
Msa0727260 MtrunA17_Chr1g0154731 23.000 300 209 8 194 487 192 475 1.00e-16 82.8
Msa0727260 MtrunA17_Chr6g0478161 29.231 195 129 4 298 486 272 463 1.78e-16 82.0
Msa0727260 MtrunA17_Chr7g0248991 21.846 325 220 11 134 439 42 351 2.15e-16 80.9
Msa0727260 MtrunA17_Chr8g0354531 21.970 396 280 14 105 486 236 616 2.48e-16 82.0
Msa0727260 MtrunA17_Chr8g0354541 30.822 146 97 3 342 486 7 149 3.16e-16 76.6
Msa0727260 MtrunA17_Chr1g0163421 27.111 225 145 6 305 518 325 541 4.01e-16 81.3
Msa0727260 MtrunA17_Chr6g0449381 23.476 443 299 18 79 494 54 483 4.14e-16 80.9
Msa0727260 MtrunA17_Chr2g0321171 27.660 235 151 8 257 485 246 467 4.19e-16 80.9
Msa0727260 MtrunA17_Chr4g0014051 27.615 239 154 6 258 484 266 497 4.42e-16 80.9
Msa0727260 MtrunA17_Chr8g0364081 24.900 249 164 7 259 486 266 512 6.24e-16 80.5
Msa0727260 MtrunA17_Chr4g0011931 25.000 288 197 7 30 309 6 282 7.28e-16 78.2
Msa0727260 MtrunA17_Chr8g0351461 22.177 487 331 18 61 518 43 510 1.32e-15 79.3
Msa0727260 MtrunA17_Chr1g0163501 23.633 512 327 20 29 505 7 489 1.63e-15 79.0
Msa0727260 MtrunA17_Chr4g0030761 29.630 162 81 5 371 518 1 143 3.32e-15 73.2
Msa0727260 MtrunA17_Chr8g0371761 29.365 126 75 3 339 454 1 122 3.36e-15 72.8
Msa0727260 MtrunA17_Chr1g0164321 22.565 421 269 16 105 484 112 516 3.41e-15 78.2
Msa0727260 MtrunA17_Chr4g0038271 24.088 274 175 8 257 507 287 550 6.45e-15 77.4
Msa0727260 MtrunA17_Chr5g0400411 25.806 217 145 6 277 485 252 460 7.66e-15 77.0
Msa0727260 MtrunA17_Chr4g0044851 23.400 453 295 17 50 486 26 442 8.83e-15 76.6
Msa0727260 MtrunA17_Chr1g0163281 23.341 437 305 17 102 517 92 519 9.95e-15 76.6
Msa0727260 MtrunA17_Chr5g0400421 26.455 189 125 5 303 485 281 461 1.68e-14 75.9
Msa0727260 MtrunA17_Chr1g0193811 25.541 231 158 6 275 495 273 499 1.77e-14 75.9
Msa0727260 MtrunA17_Chr8g0372711 26.106 226 149 6 282 501 253 466 2.13e-14 75.5
Msa0727260 MtrunA17_Chr1g0163461 25.806 186 131 4 305 484 304 488 3.55e-14 75.1
Msa0727260 MtrunA17_Chr2g0308651 26.554 177 125 4 313 486 212 386 4.50e-14 74.3
Msa0727260 MtrunA17_Chr1g0207851 26.754 228 152 4 94 307 72 298 4.98e-14 73.6
Msa0727260 MtrunA17_Chr5g0403931 23.810 462 292 18 40 486 36 452 5.60e-14 74.3
Msa0727260 MtrunA17_Chr6g0449351 22.402 433 301 19 76 484 11 432 6.55e-14 73.9
Msa0727260 MtrunA17_Chr8g0372331 32.787 122 77 3 400 517 3 123 8.32e-14 68.6
Msa0727260 MtrunA17_Chr8g0348751 25.094 267 175 10 269 517 251 510 1.73e-13 72.8
Msa0727260 MtrunA17_Chr3g0089361 26.923 208 141 6 283 486 249 449 1.77e-13 72.8
Msa0727260 MtrunA17_Chr4g0011861 25.229 218 155 6 94 305 64 279 1.94e-13 71.2
Msa0727260 MtrunA17_Chr6g0472171 30.702 114 76 2 374 486 18 129 3.31e-13 67.4
Msa0727260 MtrunA17_Chr1g0153371 22.494 409 280 14 85 485 61 440 4.67e-13 71.2
Msa0727260 MtrunA17_Chr1g0182861 30.400 125 74 3 373 486 12 134 5.59e-13 67.0
Msa0727260 MtrunA17_Chr4g0026941 24.893 233 162 7 257 484 283 507 6.17e-13 71.2
Msa0727260 MtrunA17_Chr4g0044841 20.852 446 315 13 50 486 27 443 1.21e-12 70.1
Msa0727260 MtrunA17_Chr5g0429651 23.611 288 172 10 257 517 242 508 1.52e-12 69.7
Msa0727260 MtrunA17_Chr7g0219961 22.414 232 165 6 259 486 216 436 2.04e-12 69.3
Msa0727260 MtrunA17_Chr1g0163211 26.016 246 163 9 249 484 234 470 4.00e-12 68.6
Msa0727260 MtrunA17_Chr1g0163491 26.961 204 140 5 320 517 321 521 5.86e-12 68.2
Msa0727260 MtrunA17_Chr3g0078411 24.365 197 140 4 294 486 246 437 9.51e-12 67.0
Msa0727260 MtrunA17_Chr3g0107501 25.000 252 167 9 256 500 222 458 1.01e-11 67.0
Msa0727260 MtrunA17_Chr7g0225531 23.622 508 317 24 16 485 7 481 1.24e-11 67.0
Msa0727260 MtrunA17_Chr1g0171041 28.235 170 112 6 324 485 310 477 1.30e-11 67.0
Msa0727260 MtrunA17_Chr8g0334891 24.898 245 169 7 249 485 216 453 1.34e-11 66.6
Msa0727260 MtrunA17_Chr1g0163401 23.622 254 174 8 249 484 230 481 2.86e-11 65.9
Msa0727260 MtrunA17_Chr8g0380501 24.303 251 179 6 276 518 245 492 7.11e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0727260 AT1G13710.1 65.267 524 165 8 1 518 1 513 0.0 672
Msa0727260 AT1G74110.1 62.906 523 168 8 18 517 17 536 0.0 643
Msa0727260 AT3G61880.1 52.546 491 219 5 37 517 43 529 1.38e-175 505
Msa0727260 AT3G61880.2 52.546 491 219 5 37 517 43 529 1.42e-175 506
Msa0727260 AT2G46660.1 50.487 513 229 7 24 517 22 528 2.90e-171 494
Msa0727260 AT1G01190.1 47.228 523 247 7 14 517 19 531 4.10e-167 484
Msa0727260 AT1G01190.2 47.228 523 247 7 14 517 24 536 4.30e-167 484
Msa0727260 AT5G09970.1 51.102 499 231 8 29 515 36 533 1.92e-162 472
Msa0727260 AT2G40890.1 33.191 470 297 8 62 517 29 495 2.52e-81 262
Msa0727260 AT5G07990.1 31.697 489 304 12 50 517 23 502 5.47e-80 259
Msa0727260 AT3G61040.1 33.758 471 284 12 62 516 35 493 1.06e-76 250
Msa0727260 AT4G31940.1 31.944 504 304 13 48 517 19 517 2.84e-76 249
Msa0727260 AT4G31970.1 31.809 503 305 13 48 517 19 516 1.37e-73 243
Msa0727260 AT2G45570.1 33.480 454 281 11 73 510 53 501 3.17e-73 241
Msa0727260 AT2G45550.1 32.510 486 294 15 48 510 26 500 4.62e-73 241
Msa0727260 AT5G06900.1 35.914 465 271 13 62 512 36 487 6.58e-71 235
Msa0727260 AT5G25120.1 30.632 506 309 14 27 510 1 486 1.19e-70 234
Msa0727260 AT2G45560.1 32.353 510 312 16 21 510 4 500 1.46e-70 234
Msa0727260 AT3G48300.1 31.847 471 287 14 62 518 31 481 4.44e-70 232
Msa0727260 AT3G48300.2 31.847 471 287 14 62 518 33 483 4.67e-70 232
Msa0727260 AT5G25140.1 31.612 484 282 16 55 510 24 486 6.51e-70 232
Msa0727260 AT5G57260.1 31.685 445 274 10 62 486 32 466 8.45e-70 232
Msa0727260 AT3G48310.1 31.788 453 271 15 52 486 23 455 1.93e-69 231
Msa0727260 AT3G26280.1 31.393 481 298 14 52 510 24 494 4.20e-69 230
Msa0727260 AT3G48270.1 30.905 453 286 12 58 498 29 466 4.95e-69 229
Msa0727260 AT3G26280.2 31.328 482 299 14 51 510 40 511 5.77e-69 230
Msa0727260 AT4G31950.1 31.478 521 304 14 28 517 7 505 1.57e-67 226
Msa0727260 AT5G25180.1 30.042 476 300 12 55 510 24 486 2.55e-67 225
Msa0727260 AT4G36220.1 31.264 451 274 11 72 497 54 493 2.96e-67 226
Msa0727260 AT5G25130.1 30.309 485 285 13 56 510 25 486 8.34e-67 224
Msa0727260 AT1G01280.1 31.681 464 287 13 75 517 49 503 3.09e-66 223
Msa0727260 AT3G25180.1 31.144 472 310 8 59 517 37 506 6.64e-66 222
Msa0727260 AT4G31500.1 29.652 489 312 14 46 511 13 492 8.08e-66 221
Msa0727260 AT3G26300.1 30.943 488 299 14 48 511 18 491 8.10e-66 221
Msa0727260 AT2G24180.1 30.490 469 303 10 56 510 32 491 1.06e-65 221
Msa0727260 AT4G37340.1 31.651 436 264 12 79 498 52 469 2.31e-65 220
Msa0727260 AT3G26310.1 29.857 489 302 13 48 511 18 490 5.33e-65 219
Msa0727260 AT3G48290.1 31.140 456 278 14 49 487 21 457 7.96e-65 218
Msa0727260 AT3G26330.1 30.977 481 289 14 62 517 33 495 9.78e-65 218
Msa0727260 AT1G74550.1 31.087 460 297 7 59 510 26 473 1.26e-64 218
Msa0727260 AT4G37400.1 31.637 452 282 12 79 516 52 490 1.76e-64 218
Msa0727260 AT2G45580.1 30.263 456 296 10 75 514 55 504 1.88e-64 218
Msa0727260 AT3G26320.1 30.185 487 303 12 48 511 19 491 2.28e-64 218
Msa0727260 AT1G66540.1 31.362 389 244 7 140 518 1 376 2.35e-64 214
Msa0727260 AT3G26210.1 30.516 426 269 12 78 486 51 466 8.01e-64 216
Msa0727260 AT5G67310.1 31.111 495 314 15 36 516 19 500 2.99e-63 215
Msa0727260 AT1G33720.1 29.063 523 327 17 12 512 2 502 3.55e-63 214
Msa0727260 AT3G26230.1 30.339 501 303 17 45 516 11 494 5.28e-63 214
Msa0727260 AT4G12300.1 31.504 492 308 13 44 517 28 508 6.68e-63 214
Msa0727260 AT1G13080.1 30.273 512 321 16 27 517 5 501 1.03e-62 213
Msa0727260 AT4G37430.1 29.684 475 303 13 62 517 30 492 1.07e-62 213
Msa0727260 AT4G12320.1 30.321 498 308 14 44 517 28 510 1.12e-62 214
Msa0727260 AT4G13770.1 29.243 489 322 14 45 516 15 496 1.22e-62 213
Msa0727260 AT3G48280.1 29.668 482 312 13 49 516 19 487 1.32e-62 213
Msa0727260 AT4G37370.1 30.462 476 290 15 62 516 32 487 2.37e-62 212
Msa0727260 AT4G13310.1 29.688 448 293 11 79 512 53 492 2.44e-62 212
Msa0727260 AT5G04330.1 30.083 482 308 15 58 518 30 503 3.45e-62 212
Msa0727260 AT3G26160.1 32.383 491 292 14 52 516 22 498 7.83e-62 211
Msa0727260 AT1G13110.1 29.668 482 302 15 27 487 5 470 1.04e-61 211
Msa0727260 AT3G48290.2 30.480 479 277 15 49 487 21 483 1.04e-61 211
Msa0727260 AT3G26270.1 30.480 479 304 16 52 510 24 493 1.78e-61 210
Msa0727260 AT3G48320.1 30.786 458 285 15 50 492 21 461 1.15e-60 207
Msa0727260 AT3G26170.1 31.176 510 314 17 27 516 6 498 3.25e-60 206
Msa0727260 AT4G12310.1 30.283 459 289 11 79 517 65 512 3.54e-60 207
Msa0727260 AT4G22690.1 30.575 435 286 7 94 517 119 548 3.58e-60 208
Msa0727260 AT3G28740.1 31.250 464 265 14 80 516 62 498 4.42e-60 206
Msa0727260 AT4G22710.1 30.575 435 286 7 94 517 88 517 4.64e-60 207
Msa0727260 AT5G35715.1 30.324 432 282 11 95 510 1 429 9.65e-60 204
Msa0727260 AT1G33730.1 33.154 371 224 11 158 512 4 366 1.26e-59 201
Msa0727260 AT1G33730.2 33.154 371 224 11 158 512 4 366 1.26e-59 201
Msa0727260 AT4G37310.1 29.978 457 291 12 80 517 54 500 1.29e-59 205
Msa0727260 AT4G37360.1 30.493 446 280 11 79 510 52 481 1.84e-59 204
Msa0727260 AT5G44620.1 32.222 450 289 9 79 517 67 511 2.00e-59 205
Msa0727260 AT5G24950.1 30.238 420 273 11 78 486 52 462 4.92e-59 203
Msa0727260 AT2G30770.1 30.444 450 287 13 78 512 53 491 6.44e-59 203
Msa0727260 AT2G23190.1 28.854 506 321 15 29 516 49 533 8.64e-59 204
Msa0727260 AT1G64940.1 34.419 430 239 16 116 517 94 508 4.51e-58 201
Msa0727260 AT4G13290.1 29.505 444 291 12 79 512 54 485 5.37e-58 200
Msa0727260 AT1G33720.4 31.830 377 233 9 152 512 2 370 5.73e-58 197
Msa0727260 AT1G33720.3 31.830 377 233 9 152 512 2 370 5.73e-58 197
Msa0727260 AT1G33720.5 31.830 377 233 9 152 512 2 370 5.73e-58 197
Msa0727260 AT3G26290.1 31.006 487 299 12 48 511 19 491 1.17e-57 200
Msa0727260 AT3G26180.1 31.008 516 307 20 27 516 6 498 1.19e-57 200
Msa0727260 AT2G25160.1 30.612 441 281 11 99 517 75 512 1.62e-57 200
Msa0727260 AT3G26290.2 31.006 487 299 12 48 511 32 504 1.71e-57 199
Msa0727260 AT4G37320.1 28.458 506 314 17 31 513 6 486 2.03e-57 199
Msa0727260 AT2G23220.1 30.415 434 268 13 97 516 92 505 2.51e-57 199
Msa0727260 AT1G74540.1 30.472 466 298 9 59 510 26 479 4.29e-57 198
Msa0727260 AT5G57220.1 28.745 494 308 15 29 504 3 470 4.79e-57 198
Msa0727260 AT4G12330.1 30.889 450 294 9 79 517 67 510 2.54e-56 196
Msa0727260 AT3G26150.1 30.426 516 314 17 25 516 4 498 3.00e-56 196
Msa0727260 AT1G13090.2 28.924 446 284 14 62 486 30 463 5.34e-56 195
Msa0727260 AT3G53300.1 30.753 478 304 16 58 516 26 495 5.99e-56 195
Msa0727260 AT2G42250.1 28.983 521 329 14 21 515 3 508 6.63e-56 195
Msa0727260 AT2G45580.2 34.451 328 197 7 199 514 29 350 7.50e-56 191
Msa0727260 AT5G36220.1 30.093 432 263 12 104 516 84 495 8.79e-56 195
Msa0727260 AT4G37330.1 30.162 494 318 16 31 513 6 483 1.37e-55 194
Msa0727260 AT3G26190.1 31.140 456 286 13 50 486 18 464 1.40e-55 194
Msa0727260 AT4G37410.1 28.131 487 324 14 45 516 15 490 9.52e-55 192
Msa0727260 AT2G30750.1 30.608 477 305 13 52 512 25 491 2.20e-54 191
Msa0727260 AT2G02580.1 30.328 488 301 14 48 511 19 491 4.28e-54 190
Msa0727260 AT1G11610.1 31.180 449 285 12 78 512 53 491 8.46e-54 189
Msa0727260 AT5G10600.1 27.294 425 295 8 100 516 87 505 1.16e-53 189
Msa0727260 AT1G33720.2 30.100 402 232 10 152 512 2 395 2.25e-53 186
Msa0727260 AT4G39950.1 29.065 492 309 14 39 511 55 525 4.12e-53 188
Msa0727260 AT1G64950.1 33.175 422 255 12 116 517 93 507 5.72e-53 187
Msa0727260 AT4G39950.2 29.065 492 309 14 39 511 95 565 7.37e-53 189
Msa0727260 AT3G44250.1 30.490 469 300 12 62 511 30 491 9.08e-53 186
Msa0727260 AT5G24960.1 30.290 482 303 15 51 512 24 492 1.70e-52 186
Msa0727260 AT2G14100.1 28.352 522 331 16 14 517 11 507 1.84e-52 186
Msa0727260 AT3G53280.1 30.233 473 303 14 62 516 30 493 3.11e-52 185
Msa0727260 AT3G26200.1 29.515 454 292 13 52 486 20 464 3.52e-52 185
Msa0727260 AT1G11610.2 30.617 454 289 13 78 517 53 494 4.34e-52 185
Msa0727260 AT1G64930.1 33.726 424 251 14 116 517 93 508 4.72e-52 185
Msa0727260 AT1G66540.2 31.366 322 201 6 204 518 9 317 5.62e-52 180
Msa0727260 AT3G10560.1 28.814 531 325 18 16 517 6 512 7.00e-52 184
Msa0727260 AT2G22330.1 27.692 520 326 16 20 511 30 527 9.69e-52 185
Msa0727260 AT2G22330.2 27.692 520 326 16 20 511 53 550 1.01e-51 185
Msa0727260 AT1G13100.1 29.108 426 260 16 88 486 53 463 2.18e-51 182
Msa0727260 AT5G04660.1 28.598 535 332 20 9 517 1 511 2.52e-51 183
Msa0727260 AT4G20240.1 30.348 402 258 11 49 438 22 413 5.08e-50 178
Msa0727260 AT3G20090.2 29.216 510 325 15 27 518 19 510 7.41e-50 179
Msa0727260 AT1G11600.1 30.309 518 326 12 25 518 4 510 9.97e-50 179
Msa0727260 AT3G26220.1 28.717 491 328 14 38 510 7 493 1.67e-49 178
Msa0727260 AT3G52970.1 29.498 478 307 15 62 516 42 512 5.17e-49 177
Msa0727260 AT1G50520.1 28.767 438 290 11 94 517 81 510 5.97e-49 177
Msa0727260 AT5G42590.1 29.187 418 280 9 78 486 52 462 6.27e-49 176
Msa0727260 AT1G13080.2 33.987 306 188 7 223 517 81 383 1.02e-48 173
Msa0727260 AT5G10610.1 26.600 500 337 11 29 516 8 489 1.56e-48 175
Msa0727260 AT3G20120.4 28.180 511 331 13 27 518 14 507 3.33e-48 174
Msa0727260 AT5G05260.2 28.659 492 309 14 59 517 39 521 3.42e-48 175
Msa0727260 AT2G12190.1 30.303 495 307 16 52 517 24 509 3.67e-48 174
Msa0727260 AT3G32047.1 30.233 430 263 13 105 512 88 502 4.08e-48 174
Msa0727260 AT1G64900.1 32.933 416 261 11 116 517 92 503 7.43e-48 173
Msa0727260 AT3G10570.1 28.668 443 287 15 94 517 80 512 7.44e-48 174
Msa0727260 AT3G52970.2 28.310 491 310 15 62 516 42 526 1.62e-47 173
Msa0727260 AT3G20950.1 27.841 528 332 18 20 518 6 513 2.64e-47 172
Msa0727260 AT4G15350.1 30.147 408 259 11 126 518 107 503 8.47e-47 171
Msa0727260 AT3G20140.1 28.814 472 296 16 68 518 53 505 9.16e-47 171
Msa0727260 AT5G04630.1 27.928 444 290 14 94 517 75 508 1.05e-46 170
Msa0727260 AT3G61040.2 32.143 364 224 10 62 412 35 388 1.20e-46 167
Msa0727260 AT5G06905.1 28.480 467 290 12 53 487 24 478 1.59e-46 170
Msa0727260 AT4G15360.1 28.373 504 327 13 29 512 11 500 1.75e-46 170
Msa0727260 AT2G30490.1 28.070 456 301 14 79 512 55 505 8.16e-46 168
Msa0727260 AT3G20940.1 27.403 489 321 15 52 518 34 510 8.48e-45 165
Msa0727260 AT1G50560.1 29.111 450 274 14 94 517 81 511 7.09e-44 162
Msa0727260 AT3G26830.1 26.737 475 309 17 36 486 4 463 9.67e-44 162
Msa0727260 AT5G36220.2 31.627 332 204 8 194 516 32 349 1.50e-43 158
Msa0727260 AT5G61320.1 30.120 415 258 10 116 517 92 487 1.76e-43 161
Msa0727260 AT4G20240.2 30.343 379 243 10 49 416 22 390 2.55e-43 159
Msa0727260 AT5G05260.1 27.812 489 285 14 59 517 39 489 5.53e-43 160
Msa0727260 AT3G20120.2 30.105 382 241 9 152 518 1 371 6.14e-43 157
Msa0727260 AT3G20120.3 30.105 382 241 9 152 518 1 371 6.14e-43 157
Msa0727260 AT3G20120.1 30.105 382 241 9 152 518 1 371 6.14e-43 157
Msa0727260 AT3G20080.2 26.835 395 275 7 135 518 119 510 6.22e-43 160
Msa0727260 AT3G20080.1 26.835 395 275 7 135 518 119 510 6.22e-43 160
Msa0727260 AT3G20960.1 29.124 388 258 9 142 518 24 405 6.33e-43 158
Msa0727260 AT3G20110.1 26.154 520 339 13 21 518 2 498 7.52e-43 160
Msa0727260 AT4G15330.1 26.984 504 335 11 27 516 17 501 7.96e-43 160
Msa0727260 AT3G20090.1 29.894 378 248 9 152 518 1 372 8.77e-43 157
Msa0727260 AT3G20960.2 29.124 388 258 9 142 518 127 508 1.84e-42 159
Msa0727260 AT3G20100.1 30.383 418 255 14 120 517 107 508 2.29e-42 158
Msa0727260 AT4G15330.2 27.895 380 265 6 143 516 97 473 1.34e-41 155
Msa0727260 AT2G27000.1 28.025 471 284 15 79 518 61 507 1.78e-41 156
Msa0727260 AT1G58260.1 26.338 467 305 15 79 517 64 519 2.36e-41 156
Msa0727260 AT1G16400.1 25.000 532 354 16 19 517 7 526 9.68e-41 154
Msa0727260 AT5G47990.1 25.459 436 288 10 105 518 88 508 1.12e-40 154
Msa0727260 AT3G03470.1 29.323 399 243 12 145 517 124 509 3.32e-40 152
Msa0727260 AT1G16410.1 24.953 537 352 15 21 517 2 527 3.51e-40 153
Msa0727260 AT5G42580.1 26.963 382 258 6 143 517 126 493 4.71e-40 152
Msa0727260 AT3G20130.1 27.093 454 307 12 79 517 64 508 7.45e-40 151
Msa0727260 AT3G20130.2 27.649 387 261 9 143 517 101 480 3.74e-39 149
Msa0727260 AT3G20935.1 30.363 303 176 8 246 518 38 335 1.15e-38 144
Msa0727260 AT4G15380.1 25.570 395 257 10 143 518 129 505 1.19e-38 148
Msa0727260 AT2G27010.1 33.205 259 162 5 268 518 230 485 1.32e-38 147
Msa0727260 AT4G13310.2 27.907 344 230 9 79 412 53 388 1.99e-38 145
Msa0727260 AT1G79370.1 25.403 496 317 13 64 517 48 532 2.35e-38 148
Msa0727260 AT3G20080.4 30.597 268 175 5 259 518 109 373 2.48e-38 144
Msa0727260 AT3G20080.5 30.597 268 175 5 259 518 109 373 2.48e-38 144
Msa0727260 AT3G20080.6 30.597 268 175 5 259 518 109 373 2.48e-38 144
Msa0727260 AT3G20080.3 30.597 268 175 5 259 518 109 373 2.48e-38 144
Msa0727260 AT1G28430.1 27.136 398 250 12 143 517 127 507 7.93e-37 143
Msa0727260 AT3G26180.2 34.363 259 152 9 269 516 113 364 1.41e-36 139
Msa0727260 AT3G53290.1 28.974 390 240 10 138 516 39 402 6.31e-34 133
Msa0727260 AT2G45580.3 27.195 353 235 9 75 412 55 400 3.20e-33 131
Msa0727260 AT3G25180.2 27.826 345 235 7 59 390 37 380 1.77e-32 129
Msa0727260 AT2G05180.1 27.157 394 247 11 68 440 52 426 6.69e-31 125
Msa0727260 AT5G25900.1 22.881 472 340 12 60 517 46 507 9.32e-31 125
Msa0727260 AT5G24960.2 27.746 346 222 12 51 380 24 357 1.81e-30 123
Msa0727260 AT2G25160.2 28.107 338 220 10 98 415 74 408 1.16e-29 121
Msa0727260 AT2G45510.1 26.601 406 266 14 105 486 81 478 2.52e-26 112
Msa0727260 AT3G14620.1 26.478 423 285 16 73 484 77 484 7.03e-25 108
Msa0727260 AT5G35917.1 23.673 490 295 15 59 517 41 482 1.18e-24 107
Msa0727260 AT2G26710.1 26.582 395 266 11 100 484 104 484 1.26e-24 107
Msa0727260 AT4G27710.1 25.558 403 271 12 97 485 100 487 1.31e-24 107
Msa0727260 AT1G75130.1 24.094 469 317 14 47 489 24 479 3.72e-23 103
Msa0727260 AT2G44890.1 25.879 398 267 13 142 518 119 509 8.66e-23 102
Msa0727260 AT1G16410.2 22.931 423 282 12 21 409 2 414 8.94e-23 101
Msa0727260 AT5G52400.1 27.193 228 157 5 261 485 268 489 1.83e-22 101
Msa0727260 AT3G14690.2 24.611 386 267 12 109 484 145 516 9.65e-22 99.0
Msa0727260 AT3G14690.1 24.611 386 267 12 109 484 110 481 1.18e-21 98.6
Msa0727260 AT2G26170.2 30.924 249 161 6 266 505 182 428 5.47e-21 95.9
Msa0727260 AT3G14630.1 27.755 245 159 8 246 484 245 477 5.65e-21 96.7
Msa0727260 AT2G26170.1 30.924 249 161 6 266 505 265 511 6.18e-21 96.7
Msa0727260 AT3G14630.2 27.755 245 159 8 246 484 300 532 7.78e-21 96.3
Msa0727260 AT2G46950.1 28.251 223 150 4 268 485 323 540 1.92e-20 95.1
Msa0727260 AT2G46960.2 24.201 438 293 14 80 495 80 500 2.19e-20 94.7
Msa0727260 AT2G27690.1 24.444 405 263 19 105 485 76 461 4.09e-20 94.0
Msa0727260 AT3G14640.2 24.742 388 266 12 109 484 132 505 4.51e-20 94.0
Msa0727260 AT3G14680.1 24.402 418 290 14 78 486 83 483 4.58e-20 93.6
Msa0727260 AT3G14640.1 24.742 388 266 12 109 484 110 483 4.83e-20 93.6
Msa0727260 AT2G44890.2 25.000 436 280 16 105 518 81 491 5.51e-20 93.2
Msa0727260 AT3G14610.1 24.121 398 275 11 99 484 99 481 7.79e-20 93.2
Msa0727260 AT3G26125.1 22.115 416 272 12 142 518 131 533 1.17e-19 92.8
Msa0727260 AT5G24910.1 22.705 414 283 12 96 487 106 504 2.06e-19 91.7
Msa0727260 AT2G46960.1 25.417 240 172 3 261 495 147 384 2.69e-19 90.5
Msa0727260 AT3G14650.1 24.791 359 247 12 139 486 137 483 3.75e-19 90.9
Msa0727260 AT1G24540.1 23.227 409 276 14 105 484 90 489 6.25e-19 90.1
Msa0727260 AT1G13140.1 23.134 402 265 12 142 507 131 524 1.24e-18 89.4
Msa0727260 AT3G53130.1 24.574 411 281 13 97 488 114 514 2.17e-18 88.6
Msa0727260 AT5G38450.1 23.892 406 256 12 108 487 110 488 3.00e-18 88.2
Msa0727260 AT3G53305.1 40.000 120 66 2 367 486 184 297 3.80e-18 86.3
Msa0727260 AT5G35920.1 34.028 144 90 4 377 517 6 147 6.23e-18 81.3
Msa0727260 AT3G14660.1 22.376 362 252 10 139 486 137 483 7.71e-18 87.0
Msa0727260 AT1G31800.1 22.444 450 304 15 97 516 145 579 7.84e-18 87.0
Msa0727260 AT3G14660.2 22.997 287 195 8 211 486 66 337 1.51e-17 84.7
Msa0727260 AT5G24900.1 22.705 414 286 15 94 487 100 499 1.53e-17 85.9
Msa0727260 AT5G23190.1 24.476 286 196 9 249 518 260 541 4.62e-17 84.7
Msa0727260 AT4G15110.1 23.690 477 302 18 94 518 113 579 6.83e-17 84.3
Msa0727260 AT1G57750.1 24.082 245 169 9 249 484 229 465 1.25e-16 83.2
Msa0727260 AT5G24900.2 29.167 168 113 4 322 487 219 382 1.26e-16 82.4
Msa0727260 AT2G29090.2 24.041 391 257 13 105 486 95 454 2.83e-16 82.0
Msa0727260 AT2G29090.1 24.041 391 257 13 105 486 95 454 2.83e-16 82.0
Msa0727260 AT1G63710.1 21.891 402 277 14 106 481 83 473 3.86e-16 81.6
Msa0727260 AT2G29090.3 24.227 388 254 13 108 486 3 359 3.88e-16 80.9
Msa0727260 AT1G67110.1 25.065 387 268 11 108 487 111 482 9.01e-16 80.5
Msa0727260 AT5G08250.2 23.929 280 193 7 257 518 264 541 1.00e-15 80.5
Msa0727260 AT5G08250.1 23.929 280 193 7 257 518 202 479 1.73e-15 79.3
Msa0727260 AT4G00360.1 22.449 441 301 18 106 517 83 511 1.77e-15 79.7
Msa0727260 AT2G45560.2 27.362 307 194 13 24 313 7 301 2.70e-15 77.4
Msa0727260 AT3G19270.1 23.919 393 256 14 105 487 80 439 9.00e-15 77.0
Msa0727260 AT5G05690.1 26.178 191 135 3 302 489 257 444 9.97e-15 77.0
Msa0727260 AT5G05690.3 26.178 191 135 3 302 489 138 325 1.65e-14 75.5
Msa0727260 AT1G73340.1 24.034 233 158 7 260 487 236 454 3.34e-14 75.5
Msa0727260 AT1G13150.1 24.113 282 188 8 257 518 243 518 5.59e-14 74.7
Msa0727260 AT1G13090.1 25.758 264 171 12 62 311 30 282 8.20e-14 72.8
Msa0727260 AT2G32440.2 23.256 387 267 12 105 485 96 458 1.13e-13 73.9
Msa0727260 AT2G32440.1 23.256 387 267 12 105 485 96 458 1.13e-13 73.9
Msa0727260 AT1G13140.2 23.387 248 162 6 287 507 252 498 1.17e-13 73.9
Msa0727260 AT1G19630.1 26.087 253 168 8 247 493 214 453 3.44e-13 72.0
Msa0727260 AT1G57750.2 24.880 209 141 7 249 449 229 429 6.14e-13 71.2
Msa0727260 AT3G48520.1 22.745 510 327 24 21 494 1 479 8.98e-13 70.9
Msa0727260 AT1G19630.3 26.316 247 163 8 247 487 214 447 1.57e-12 70.1
Msa0727260 AT5G36110.1 25.207 242 161 6 253 486 218 447 3.17e-12 69.3
Msa0727260 AT1G11680.1 25.714 245 167 7 249 485 218 455 3.56e-12 68.9
Msa0727260 AT1G65340.1 24.583 240 165 7 257 484 237 472 3.65e-12 68.9
Msa0727260 AT5G02900.1 23.361 244 170 7 257 484 205 447 5.19e-12 68.6
Msa0727260 AT4G15300.2 23.228 254 172 10 239 486 207 443 9.00e-12 67.8
Msa0727260 AT4G15300.3 23.228 254 172 10 239 486 197 433 1.09e-11 67.4
Msa0727260 AT4G15300.1 23.394 218 155 9 275 486 244 455 1.32e-11 67.4

Find 149 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTTCTCTTTGTTCT+TGG 0.135815 5_1:-29537020 Msa0727260:CDS
AGAATCTCTTTAGCAGTTTC+TGG 0.158283 5_1:+29536774 None:intergenic
CTTTCTCTATATGCTGTAAA+TGG 0.176361 5_1:-29535169 Msa0727260:three_prime_UTR
CTGATATGATTGCAGTTCTT+TGG 0.226158 5_1:-29536170 Msa0727260:CDS
GTTTGGCTTCTGTTCATCTT+TGG 0.246994 5_1:-29535597 Msa0727260:CDS
ATTCTTTGCAGTTCTGCTTT+TGG 0.247036 5_1:-29536756 Msa0727260:CDS
TTACACCAGGTGGGCTTGCT+TGG 0.255572 5_1:-29536983 Msa0727260:CDS
TCAAACCCGTTAATCCTTCT+AGG 0.260652 5_1:+29536615 None:intergenic
TTTGGTTTCTTTGCTTTGTT+TGG 0.269088 5_1:-29535376 Msa0727260:three_prime_UTR
CTCTCTGGTTTAAACTCTTC+TGG 0.277385 5_1:+29535712 None:intergenic
GCATTGTGAAAGAGGCATTA+AGG 0.287804 5_1:-29535876 Msa0727260:CDS
AAGAGAAGAAGATGAAATTC+TGG 0.292909 5_1:+29537095 None:intergenic
ATAAGGAAGGTTGGGTTGTT+TGG 0.296271 5_1:+29537149 None:intergenic
TGAATGTCTTAAGCTTTCTA+TGG 0.308189 5_1:-29535512 Msa0727260:CDS
TACACCAGGTGGGCTTGCTT+GGG 0.314029 5_1:-29536982 Msa0727260:CDS
ACCATAGCAGTTGTACCTTT+AGG 0.343910 5_1:+29535778 None:intergenic
TCCTGGAAAAGCTATGGGTT+TGG 0.345281 5_1:-29535614 Msa0727260:CDS
AGTTACTTCATAACTTCAAA+TGG 0.348089 5_1:-29535567 Msa0727260:CDS
GACATGGATATTGTGGGGTT+TGG 0.349660 5_1:-29535394 Msa0727260:three_prime_UTR
TGATATGATTGCAGTTCTTT+GGG 0.349760 5_1:-29536169 Msa0727260:intron
GGTATTGCTAAGTAGGGTTA+TGG 0.353964 5_1:-29535347 Msa0727260:three_prime_UTR
ATTAAGTAGATGTTTGGTTT+TGG 0.355612 5_1:-29535203 Msa0727260:three_prime_UTR
GGTTGGATTTGCAAGGTGTT+AGG 0.357780 5_1:-29536347 Msa0727260:CDS
GAAGAAATTTACCGTGTTGT+TGG 0.362445 5_1:-29535952 Msa0727260:CDS
TCAGCCAAGTCTGTTATTCC+AGG 0.366836 5_1:-29536936 Msa0727260:CDS
CTTTGCTTTGTTTGGCAAAA+GGG 0.368212 5_1:-29535368 Msa0727260:three_prime_UTR
GAGTGAGGTTGGTTTGAAAA+TGG 0.370170 5_1:-29536583 Msa0727260:CDS
AGAGAGAGAGTGAGAGAAAG+AGG 0.373369 5_1:+29537179 None:intergenic
TCTTTGCTTTGTTTGGCAAA+AGG 0.381521 5_1:-29535369 Msa0727260:three_prime_UTR
ACGGTGACTCTTGGCTAGTT+TGG 0.385532 5_1:+29536854 None:intergenic
TTGCTAATTAAGTAGATGTT+TGG 0.386399 5_1:-29535209 Msa0727260:three_prime_UTR
GAAAGAAGCAAAGTGCAGTT+TGG 0.386531 5_1:+29537033 None:intergenic
GGTTTGTTTGGTATTCTCTC+AGG 0.388733 5_1:-29536900 Msa0727260:CDS
AAATGTTATGATTTCTTTGA+TGG 0.389985 5_1:-29536459 Msa0727260:CDS
GATTTGAGGTTAGCACCATT+TGG 0.390000 5_1:-29535655 Msa0727260:CDS
TTTAGTAGTTAAGTGGGTGT+TGG 0.395443 5_1:-29535255 Msa0727260:three_prime_UTR
GCAAAAGGGTATTGCTAAGT+AGG 0.399335 5_1:-29535354 Msa0727260:three_prime_UTR
CAAGGTTGTTCCTAGGACCT+AGG 0.399449 5_1:-29535467 Msa0727260:exon
TCCTTCTAGGACAAAACAAA+TGG 0.402768 5_1:+29536628 None:intergenic
GAATGAGGATGTGAGTATAA+TGG 0.405030 5_1:-29535683 Msa0727260:CDS
TTTAGCTGTTCATGATGTTA+TGG 0.408671 5_1:-29535818 Msa0727260:CDS
CACCTTCTCATCATGTGTTA+TGG 0.409112 5_1:+29535744 None:intergenic
CTTGCAATGCATTGTGAAAG+AGG 0.413621 5_1:-29535884 Msa0727260:CDS
TTTCTCTATATGCTGTAAAT+GGG 0.423517 5_1:-29535168 Msa0727260:three_prime_UTR
TTAGTAGTTAAGTGGGTGTT+GGG 0.427744 5_1:-29535254 Msa0727260:three_prime_UTR
CATTGTGAAAGAGGCATTAA+GGG 0.428615 5_1:-29535875 Msa0727260:CDS
AATATTACTAGAATGGATTC+TGG 0.429316 5_1:-29536016 Msa0727260:CDS
GTTCACTTGAAATAATGAAC+CGG 0.434204 5_1:+29536796 None:intergenic
GCAATGGGGTTTGCTCCATA+TGG 0.440904 5_1:-29536687 Msa0727260:CDS
GGATGAAAGTAAACAAGGTC+GGG 0.443612 5_1:+29537071 None:intergenic
AGACATTCATCTAAATCAAC+AGG 0.444258 5_1:+29535526 None:intergenic
AATGAGGATGTGAGTATAAT+GGG 0.445131 5_1:-29535682 Msa0727260:CDS
CGACTCAGCACGGTGACTCT+TGG 0.456143 5_1:+29536845 None:intergenic
GAGAGAGAGTGAGAGAAAGA+GGG 0.457644 5_1:+29537180 None:intergenic
AATACCAAACAAACCAGAAA+AGG 0.457994 5_1:+29536908 None:intergenic
TCCTCATTCATAAACCTCTC+TGG 0.459390 5_1:+29535697 None:intergenic
AGATGAGAAATAAGGAAGGT+TGG 0.460435 5_1:+29537140 None:intergenic
TCACCGTGCTGAGTCGTTGA+TGG 0.460513 5_1:-29536838 Msa0727260:CDS
AGAAGGATTAACGGGTTTGA+AGG 0.461489 5_1:-29536612 Msa0727260:CDS
TTCCTCCAGTACTCTCCATA+TGG 0.464280 5_1:+29536672 None:intergenic
TAGGAAAAGGTGTAGAGCTT+TGG 0.465846 5_1:-29536328 Msa0727260:CDS
GTTACTTCATAACTTCAAAT+GGG 0.468080 5_1:-29535566 Msa0727260:CDS
GATGAGAAATAAGGAAGGTT+GGG 0.468477 5_1:+29537141 None:intergenic
CTTGACTTGTATGAGAAAGT+TGG 0.468829 5_1:-29535416 Msa0727260:three_prime_UTR
ACTTAACTACTAAACCTAAA+CGG 0.472464 5_1:+29535264 None:intergenic
TATGATTTCTTTGATGGTGA+TGG 0.474505 5_1:-29536453 Msa0727260:CDS
ACCAGAGAGGTTTATGAATG+AGG 0.478894 5_1:-29535698 Msa0727260:CDS
GAGTGAAGGGTATGAGCTGT+TGG 0.478911 5_1:-29536409 Msa0727260:CDS
CACCATTTGGAGCTGGTAGG+AGG 0.483738 5_1:-29535642 Msa0727260:CDS
TTTGTCCTAGAAGGATTAAC+GGG 0.483837 5_1:-29536620 Msa0727260:CDS
ATTTGCAAGGTGTTAGGAAA+AGG 0.484209 5_1:-29536341 Msa0727260:CDS
GGTTTGTCCTGGAAAAGCTA+TGG 0.488277 5_1:-29535620 Msa0727260:CDS
TTAGCTTAGCCCTAGGTCCT+AGG 0.488734 5_1:+29535457 None:intergenic
AATTAGATTCTAAATAGAAA+AGG 0.489854 5_1:+29535315 None:intergenic
GTTTAGGTTTAGTAGTTAAG+TGG 0.499448 5_1:-29535262 Msa0727260:three_prime_UTR
TTGCTCCATATGGAGAGTAC+TGG 0.501285 5_1:-29536677 Msa0727260:CDS
CAGTAGCAATATTACTAGAA+TGG 0.502715 5_1:-29536023 Msa0727260:CDS
TTGTGTGCAAGGTTGTTCCT+AGG 0.505786 5_1:-29535474 Msa0727260:CDS
AAACCAGAAAAGGAAGGGCC+TGG 0.510773 5_1:+29536918 None:intergenic
CACCTGGTGTAAGCCAGAAA+AGG 0.511358 5_1:+29536994 None:intergenic
CAAAAGGGTATTGCTAAGTA+GGG 0.513251 5_1:-29535353 Msa0727260:three_prime_UTR
TTGGGTTGGTTGGATTTGCA+AGG 0.513794 5_1:-29536354 Msa0727260:CDS
GTTTGGAAAGTGAGAGTGAA+TGG 0.514602 5_1:+29537050 None:intergenic
TGGTGTTGAGCTTGATGAGT+TGG 0.514872 5_1:-29536433 Msa0727260:CDS
AGTGAAGGGTATGAGCTGTT+GGG 0.515751 5_1:-29536408 Msa0727260:CDS
AATGTGATGATGACTGTGTT+TGG 0.516707 5_1:-29536483 Msa0727260:CDS
GTTTGTCCTGGAAAAGCTAT+GGG 0.521346 5_1:-29535619 Msa0727260:CDS
GTATAATGGGATCTGATTTG+AGG 0.521508 5_1:-29535669 Msa0727260:CDS
GCTGTTCATGATGTTATGGT+TGG 0.524500 5_1:-29535814 Msa0727260:CDS
CAACTGCTATGGTGAATATG+TGG 0.529595 5_1:-29535768 Msa0727260:CDS
AGGTTAGCACCATTTGGAGC+TGG 0.532296 5_1:-29535649 Msa0727260:CDS
ACCATTTGGAGCTGGTAGGA+GGG 0.537516 5_1:-29535641 Msa0727260:CDS
ACCCTCCTACCAGCTCCAAA+TGG 0.538408 5_1:+29535640 None:intergenic
CCTTCTAGGACAAAACAAAT+GGG 0.538810 5_1:+29536629 None:intergenic
GAAGAGAATGTCTGAAGGAA+GGG 0.540549 5_1:-29536256 Msa0727260:CDS
GCCCATGATAAAAGTGGTCC+TGG 0.546926 5_1:+29535844 None:intergenic
GCATTAAGGGTGCATCCACC+AGG 0.548324 5_1:-29535862 Msa0727260:CDS
AACATCTACTTAATTAGCAA+CGG 0.553159 5_1:+29535212 None:intergenic
TCGTAAGCTGACTCTTTCAC+TGG 0.554859 5_1:+29536726 None:intergenic
AAACGTGCCCATGATAAAAG+TGG 0.554879 5_1:+29535838 None:intergenic
TTTAGGTTTAGTAGTTAAGT+GGG 0.555225 5_1:-29535261 Msa0727260:three_prime_UTR
TGAAGAGAATGTCTGAAGGA+AGG 0.555473 5_1:-29536257 Msa0727260:CDS
AGAATGGATTCTGGCTAGGA+TGG 0.555569 5_1:-29536007 Msa0727260:CDS
AAAGCCCAAGCAAGCCCACC+TGG 0.557683 5_1:+29536978 None:intergenic
AAATCCAACCAACCCAAAAG+AGG 0.558710 5_1:+29536360 None:intergenic
TGAGGTTGGTTTGAAAATGG+TGG 0.559394 5_1:-29536580 Msa0727260:CDS
AAGTTGGACATGGATATTGT+GGG 0.560081 5_1:-29535400 Msa0727260:three_prime_UTR
GTGTAGAGCTTTGGTGACAA+AGG 0.561035 5_1:-29536319 Msa0727260:CDS
TCCTAAAGGTACAACTGCTA+TGG 0.561192 5_1:-29535779 Msa0727260:CDS
GGTGACAAGCATGTTCCTAA+AGG 0.563690 5_1:-29535793 Msa0727260:CDS
AAGAGGGAGAGAGAGAGTTG+CGG 0.569816 5_1:+29537196 None:intergenic
TTGAAGATGAGAAATAAGGA+AGG 0.569866 5_1:+29537136 None:intergenic
CTTTAGAATTTCCAACAACA+CGG 0.570100 5_1:+29535941 None:intergenic
AAAGTTGGACATGGATATTG+TGG 0.570232 5_1:-29535401 Msa0727260:three_prime_UTR
TCTGAAGGAAGGGCTATAGT+TGG 0.570295 5_1:-29536246 Msa0727260:CDS
GCTGGTAGGAGGGTTTGTCC+TGG 0.571225 5_1:-29535631 Msa0727260:CDS
TACTAGAATGGATTCTGGCT+AGG 0.571240 5_1:-29536011 Msa0727260:CDS
CCAAACAAACCAGAAAAGGA+AGG 0.578640 5_1:+29536912 None:intergenic
CTTGATGAGTTGGTGAGTGA+AGG 0.580402 5_1:-29536423 Msa0727260:CDS
AAGGTTGTTCCTAGGACCTA+GGG 0.584866 5_1:-29535466 Msa0727260:exon
TTCACTTGAAATAATGAACC+GGG 0.585967 5_1:+29536797 None:intergenic
TTGATGAGTTGGTGAGTGAA+GGG 0.587304 5_1:-29536422 Msa0727260:CDS
GGAACAACCTTGCACACAAG+TGG 0.589030 5_1:+29535478 None:intergenic
TGGATGAAAGTAAACAAGGT+CGG 0.594629 5_1:+29537070 None:intergenic
CTCCATATGGAGAGTACTGG+AGG 0.596336 5_1:-29536674 Msa0727260:CDS
ACTAACATTAGCTTAGCCCT+AGG 0.596895 5_1:+29535450 None:intergenic
AAGATGAAATTCTGGAGACA+TGG 0.597977 5_1:+29537103 None:intergenic
AGTTGGACATGGATATTGTG+GGG 0.598383 5_1:-29535399 Msa0727260:three_prime_UTR
GAGAGTACTGGAGGAATCTG+AGG 0.600190 5_1:-29536665 Msa0727260:CDS
TTGGTTTGAAAATGGTGGAG+AGG 0.606844 5_1:-29536575 Msa0727260:CDS
GGGTGATATGGGTAGTGTTG+AGG 0.612456 5_1:-29536538 Msa0727260:CDS
CATATAGAGAAAGAAGACAT+TGG 0.614961 5_1:+29535179 None:intergenic
CAGAAGAGTTTAAACCAGAG+AGG 0.618363 5_1:-29535711 Msa0727260:CDS
AGGGCCTGGAATAACAGACT+TGG 0.625646 5_1:+29536932 None:intergenic
TAACACATGATGAGAAGGTG+TGG 0.629750 5_1:-29535741 Msa0727260:CDS
AAGCCATCAACGACTCAGCA+CGG 0.637809 5_1:+29536835 None:intergenic
AAGATGAAGAGAATGTCTGA+AGG 0.637936 5_1:-29536261 Msa0727260:CDS
GATGAAAGTAAACAAGGTCG+GGG 0.638302 5_1:+29537072 None:intergenic
GGCCATAACACATGATGAGA+AGG 0.646254 5_1:-29535746 Msa0727260:CDS
TAGCACCATTTGGAGCTGGT+AGG 0.659306 5_1:-29535645 Msa0727260:CDS
CAAACAAACCAGAAAAGGAA+GGG 0.661167 5_1:+29536913 None:intergenic
TGGCTAGTTTGGCTAAAACA+CGG 0.661621 5_1:+29536865 None:intergenic
CATGATAAAAGTGGTCCTGG+TGG 0.662382 5_1:+29535847 None:intergenic
AGTACTGGAGGAATCTGAGG+AGG 0.670852 5_1:-29536662 Msa0727260:CDS
AACTGCTATGGTGAATATGT+GGG 0.677394 5_1:-29535767 Msa0727260:CDS
TGAATGGATGAAAGTAAACA+AGG 0.678420 5_1:+29537066 None:intergenic
TTGTATGAGAAAGTTGGACA+TGG 0.682612 5_1:-29535410 Msa0727260:three_prime_UTR
AGTTTGGCTAAAACACGGTG+TGG 0.697791 5_1:+29536870 None:intergenic
TCAACAGGTGAATCAACACA+TGG 0.698275 5_1:+29535541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAACATATAAAGAAATA+TGG + chr5_1:29536195-29536214 None:intergenic 10.0%
!! TAAAAACATATAAAGAAATA+TGG + chr5_1:29536195-29536214 None:intergenic 10.0%
!!! TTTTGTTTTCTTATGTTTTT+TGG - chr5_1:29536219-29536238 Msa0727260:CDS 15.0%
!! AATTAGATTCTAAATAGAAA+AGG + chr5_1:29537021-29537040 None:intergenic 15.0%
!!! TTTTGTTTTCTTATGTTTTT+TGG - chr5_1:29536219-29536238 Msa0727260:CDS 15.0%
!! AATTAGATTCTAAATAGAAA+AGG + chr5_1:29537021-29537040 None:intergenic 15.0%
!! AAATGTTATGATTTCTTTGA+TGG - chr5_1:29535874-29535893 Msa0727260:CDS 20.0%
!!! TTTGATTTTTGTCTTCTTTT+AGG - chr5_1:29536263-29536282 Msa0727260:CDS 20.0%
!! AAATGTTATGATTTCTTTGA+TGG - chr5_1:29535874-29535893 Msa0727260:CDS 20.0%
!!! TTTGATTTTTGTCTTCTTTT+AGG - chr5_1:29536263-29536282 Msa0727260:CDS 20.0%
!!! CTTTTTGAAGATGAGAAATA+AGG + chr5_1:29535204-29535223 None:intergenic 25.0%
!! TTTTGTTGGAAAGATAATAG+AGG - chr5_1:29536044-29536063 Msa0727260:CDS 25.0%
!!! TTCTTATGTTTTTTGGTGTT+TGG - chr5_1:29536226-29536245 Msa0727260:CDS 25.0%
!!! TTTTAGGAAATGATTTTCAG+AGG - chr5_1:29536279-29536298 Msa0727260:CDS 25.0%
!! AATATTACTAGAATGGATTC+TGG - chr5_1:29536317-29536336 Msa0727260:CDS 25.0%
! AGTTACTTCATAACTTCAAA+TGG - chr5_1:29536766-29536785 Msa0727260:CDS 25.0%
! GTTACTTCATAACTTCAAAT+GGG - chr5_1:29536767-29536786 Msa0727260:CDS 25.0%
! ACTTAACTACTAAACCTAAA+CGG + chr5_1:29537072-29537091 None:intergenic 25.0%
!! TTTAGGTTTAGTAGTTAAGT+GGG - chr5_1:29537072-29537091 Msa0727260:CDS 25.0%
! AACATCTACTTAATTAGCAA+CGG + chr5_1:29537124-29537143 None:intergenic 25.0%
! TTGCTAATTAAGTAGATGTT+TGG - chr5_1:29537124-29537143 Msa0727260:five_prime_UTR 25.0%
!!! ATTAAGTAGATGTTTGGTTT+TGG - chr5_1:29537130-29537149 Msa0727260:five_prime_UTR 25.0%
! TTTCTCTATATGCTGTAAAT+GGG - chr5_1:29537165-29537184 Msa0727260:five_prime_UTR 25.0%
!!! CTTTTTGAAGATGAGAAATA+AGG + chr5_1:29535204-29535223 None:intergenic 25.0%
!! TTTTGTTGGAAAGATAATAG+AGG - chr5_1:29536044-29536063 Msa0727260:CDS 25.0%
!!! TTCTTATGTTTTTTGGTGTT+TGG - chr5_1:29536226-29536245 Msa0727260:CDS 25.0%
!!! TTTTAGGAAATGATTTTCAG+AGG - chr5_1:29536279-29536298 Msa0727260:CDS 25.0%
!! AATATTACTAGAATGGATTC+TGG - chr5_1:29536317-29536336 Msa0727260:CDS 25.0%
! AGTTACTTCATAACTTCAAA+TGG - chr5_1:29536766-29536785 Msa0727260:CDS 25.0%
! GTTACTTCATAACTTCAAAT+GGG - chr5_1:29536767-29536786 Msa0727260:CDS 25.0%
! ACTTAACTACTAAACCTAAA+CGG + chr5_1:29537072-29537091 None:intergenic 25.0%
!! TTTAGGTTTAGTAGTTAAGT+GGG - chr5_1:29537072-29537091 Msa0727260:CDS 25.0%
! AACATCTACTTAATTAGCAA+CGG + chr5_1:29537124-29537143 None:intergenic 25.0%
! TTGCTAATTAAGTAGATGTT+TGG - chr5_1:29537124-29537143 Msa0727260:five_prime_UTR 25.0%
!!! ATTAAGTAGATGTTTGGTTT+TGG - chr5_1:29537130-29537149 Msa0727260:five_prime_UTR 25.0%
! TTTCTCTATATGCTGTAAAT+GGG - chr5_1:29537165-29537184 Msa0727260:five_prime_UTR 25.0%
TTGAAGATGAGAAATAAGGA+AGG + chr5_1:29535200-29535219 None:intergenic 30.0%
AAGAGAAGAAGATGAAATTC+TGG + chr5_1:29535241-29535260 None:intergenic 30.0%
TGAATGGATGAAAGTAAACA+AGG + chr5_1:29535270-29535289 None:intergenic 30.0%
AATACCAAACAAACCAGAAA+AGG + chr5_1:29535428-29535447 None:intergenic 30.0%
TTCACTTGAAATAATGAACC+GGG + chr5_1:29535539-29535558 None:intergenic 30.0%
GTTCACTTGAAATAATGAAC+CGG + chr5_1:29535540-29535559 None:intergenic 30.0%
!! TTACGAGCTTTTGTTTCATA+GGG - chr5_1:29535624-29535643 Msa0727260:CDS 30.0%
! TTTTGTCCTAGAAGGATTAA+CGG - chr5_1:29535712-29535731 Msa0727260:CDS 30.0%
!!! GTGAAAAAAGTGCTTCATTT+TGG - chr5_1:29535817-29535836 Msa0727260:CDS 30.0%
!! TATGATTTCTTTGATGGTGA+TGG - chr5_1:29535880-29535899 Msa0727260:CDS 30.0%
! AGTGATCATTTTCCTCTTTT+GGG - chr5_1:29535961-29535980 Msa0727260:CDS 30.0%
! ACAAAGGTTAATGCTTTTGT+TGG - chr5_1:29536030-29536049 Msa0727260:CDS 30.0%
! TGTTGACGTTTTACTTGATT+TGG - chr5_1:29536116-29536135 Msa0727260:intron 30.0%
TGATATGATTGCAGTTCTTT+GGG - chr5_1:29536164-29536183 Msa0727260:intron 30.0%
CAGTAGCAATATTACTAGAA+TGG - chr5_1:29536310-29536329 Msa0727260:CDS 30.0%
!! CTTTAGAATTTCCAACAACA+CGG + chr5_1:29536395-29536414 None:intergenic 30.0%
TTTAGCTGTTCATGATGTTA+TGG - chr5_1:29536515-29536534 Msa0727260:CDS 30.0%
AATGAGGATGTGAGTATAAT+GGG - chr5_1:29536651-29536670 Msa0727260:CDS 30.0%
AGACATTCATCTAAATCAAC+AGG + chr5_1:29536810-29536829 None:intergenic 30.0%
TGAATGTCTTAAGCTTTCTA+TGG - chr5_1:29536821-29536840 Msa0727260:CDS 30.0%
! TTTGGTTTCTTTGCTTTGTT+TGG - chr5_1:29536957-29536976 Msa0727260:CDS 30.0%
! GTTTAGGTTTAGTAGTTAAG+TGG - chr5_1:29537071-29537090 Msa0727260:CDS 30.0%
CATATAGAGAAAGAAGACAT+TGG + chr5_1:29537157-29537176 None:intergenic 30.0%
CTTTCTCTATATGCTGTAAA+TGG - chr5_1:29537164-29537183 Msa0727260:five_prime_UTR 30.0%
TTGAAGATGAGAAATAAGGA+AGG + chr5_1:29535200-29535219 None:intergenic 30.0%
AAGAGAAGAAGATGAAATTC+TGG + chr5_1:29535241-29535260 None:intergenic 30.0%
TGAATGGATGAAAGTAAACA+AGG + chr5_1:29535270-29535289 None:intergenic 30.0%
AATACCAAACAAACCAGAAA+AGG + chr5_1:29535428-29535447 None:intergenic 30.0%
TTCACTTGAAATAATGAACC+GGG + chr5_1:29535539-29535558 None:intergenic 30.0%
GTTCACTTGAAATAATGAAC+CGG + chr5_1:29535540-29535559 None:intergenic 30.0%
!! TTACGAGCTTTTGTTTCATA+GGG - chr5_1:29535624-29535643 Msa0727260:CDS 30.0%
! TTTTGTCCTAGAAGGATTAA+CGG - chr5_1:29535712-29535731 Msa0727260:CDS 30.0%
!!! GTGAAAAAAGTGCTTCATTT+TGG - chr5_1:29535817-29535836 Msa0727260:CDS 30.0%
!! TATGATTTCTTTGATGGTGA+TGG - chr5_1:29535880-29535899 Msa0727260:CDS 30.0%
! AGTGATCATTTTCCTCTTTT+GGG - chr5_1:29535961-29535980 Msa0727260:CDS 30.0%
! ACAAAGGTTAATGCTTTTGT+TGG - chr5_1:29536030-29536049 Msa0727260:CDS 30.0%
! TGTTGACGTTTTACTTGATT+TGG - chr5_1:29536116-29536135 Msa0727260:intron 30.0%
TGATATGATTGCAGTTCTTT+GGG - chr5_1:29536164-29536183 Msa0727260:intron 30.0%
CAGTAGCAATATTACTAGAA+TGG - chr5_1:29536310-29536329 Msa0727260:CDS 30.0%
!! CTTTAGAATTTCCAACAACA+CGG + chr5_1:29536395-29536414 None:intergenic 30.0%
TTTAGCTGTTCATGATGTTA+TGG - chr5_1:29536515-29536534 Msa0727260:CDS 30.0%
AATGAGGATGTGAGTATAAT+GGG - chr5_1:29536651-29536670 Msa0727260:CDS 30.0%
AGACATTCATCTAAATCAAC+AGG + chr5_1:29536810-29536829 None:intergenic 30.0%
TGAATGTCTTAAGCTTTCTA+TGG - chr5_1:29536821-29536840 Msa0727260:CDS 30.0%
! TTTGGTTTCTTTGCTTTGTT+TGG - chr5_1:29536957-29536976 Msa0727260:CDS 30.0%
! GTTTAGGTTTAGTAGTTAAG+TGG - chr5_1:29537071-29537090 Msa0727260:CDS 30.0%
CATATAGAGAAAGAAGACAT+TGG + chr5_1:29537157-29537176 None:intergenic 30.0%
CTTTCTCTATATGCTGTAAA+TGG - chr5_1:29537164-29537183 Msa0727260:five_prime_UTR 30.0%
GATGAGAAATAAGGAAGGTT+GGG + chr5_1:29535195-29535214 None:intergenic 35.0%
AGATGAGAAATAAGGAAGGT+TGG + chr5_1:29535196-29535215 None:intergenic 35.0%
! AAGATGAAATTCTGGAGACA+TGG + chr5_1:29535233-29535252 None:intergenic 35.0%
TGGATGAAAGTAAACAAGGT+CGG + chr5_1:29535266-29535285 None:intergenic 35.0%
TGCTTCTTTCTCTTTGTTCT+TGG - chr5_1:29535313-29535332 Msa0727260:three_prime_UTR 35.0%
! TTGTTCTTGGTTTCCTTTTC+TGG - chr5_1:29535326-29535345 Msa0727260:three_prime_UTR 35.0%
CAAACAAACCAGAAAAGGAA+GGG + chr5_1:29535423-29535442 None:intergenic 35.0%
!!! CTTTTTCTGTTGGTTTAACC+CGG - chr5_1:29535518-29535537 Msa0727260:CDS 35.0%
AGAATCTCTTTAGCAGTTTC+TGG + chr5_1:29535562-29535581 None:intergenic 35.0%
! ATTCTTTGCAGTTCTGCTTT+TGG - chr5_1:29535577-29535596 Msa0727260:CDS 35.0%
!! CTTACGAGCTTTTGTTTCAT+AGG - chr5_1:29535623-29535642 Msa0727260:CDS 35.0%
!! CTTTTGTTTCATAGGGCAAT+GGG - chr5_1:29535631-29535650 Msa0727260:CDS 35.0%
!! TTTTGTTTCATAGGGCAATG+GGG - chr5_1:29535632-29535651 Msa0727260:CDS 35.0%
!! CCTTCTAGGACAAAACAAAT+GGG + chr5_1:29535707-29535726 None:intergenic 35.0%
!! TCCTTCTAGGACAAAACAAA+TGG + chr5_1:29535708-29535727 None:intergenic 35.0%
TTTGTCCTAGAAGGATTAAC+GGG - chr5_1:29535713-29535732 Msa0727260:CDS 35.0%
!!! TTAACGGGTTTGAAGGTTTT+AGG - chr5_1:29535728-29535747 Msa0727260:CDS 35.0%
! GAGAGGATAGAGTTTTTGAT+GGG - chr5_1:29535775-29535794 Msa0727260:CDS 35.0%
!! AGAGTTTTTGATGGGTGATA+TGG - chr5_1:29535783-29535802 Msa0727260:CDS 35.0%
!! GAGTTTTTGATGGGTGATAT+GGG - chr5_1:29535784-29535803 Msa0727260:CDS 35.0%
! AATGTGATGATGACTGTGTT+TGG - chr5_1:29535850-29535869 Msa0727260:CDS 35.0%
! GAGTGATCATTTTCCTCTTT+TGG - chr5_1:29535960-29535979 Msa0727260:CDS 35.0%
!! ATCATTTTCCTCTTTTGGGT+TGG - chr5_1:29535965-29535984 Msa0727260:CDS 35.0%
! ATTTGCAAGGTGTTAGGAAA+AGG - chr5_1:29535992-29536011 Msa0727260:CDS 35.0%
AAGATGAAGAGAATGTCTGA+AGG - chr5_1:29536072-29536091 Msa0727260:intron 35.0%
!!! TGACGTTTTACTTGATTTGG+AGG - chr5_1:29536119-29536138 Msa0727260:intron 35.0%
CTGATATGATTGCAGTTCTT+TGG - chr5_1:29536163-29536182 Msa0727260:intron 35.0%
GAAGAAATTTACCGTGTTGT+TGG - chr5_1:29536381-29536400 Msa0727260:CDS 35.0%
!! CATTGTGAAAGAGGCATTAA+GGG - chr5_1:29536458-29536477 Msa0727260:CDS 35.0%
AACTGCTATGGTGAATATGT+GGG - chr5_1:29536566-29536585 Msa0727260:CDS 35.0%
GAATGAGGATGTGAGTATAA+TGG - chr5_1:29536650-29536669 Msa0727260:CDS 35.0%
! GTATAATGGGATCTGATTTG+AGG - chr5_1:29536664-29536683 Msa0727260:CDS 35.0%
!! CTTGACTTGTATGAGAAAGT+TGG - chr5_1:29536917-29536936 Msa0727260:CDS 35.0%
TTGTATGAGAAAGTTGGACA+TGG - chr5_1:29536923-29536942 Msa0727260:CDS 35.0%
AAAGTTGGACATGGATATTG+TGG - chr5_1:29536932-29536951 Msa0727260:CDS 35.0%
AAGTTGGACATGGATATTGT+GGG - chr5_1:29536933-29536952 Msa0727260:CDS 35.0%
!! TCTTTGCTTTGTTTGGCAAA+AGG - chr5_1:29536964-29536983 Msa0727260:CDS 35.0%
!! CTTTGCTTTGTTTGGCAAAA+GGG - chr5_1:29536965-29536984 Msa0727260:CDS 35.0%
!! CAAAAGGGTATTGCTAAGTA+GGG - chr5_1:29536980-29536999 Msa0727260:CDS 35.0%
!!! TGTTTTGTTGTTGACCGTTT+AGG - chr5_1:29537055-29537074 Msa0727260:CDS 35.0%
TTTAGTAGTTAAGTGGGTGT+TGG - chr5_1:29537078-29537097 Msa0727260:CDS 35.0%
TTAGTAGTTAAGTGGGTGTT+GGG - chr5_1:29537079-29537098 Msa0727260:CDS 35.0%
GATGAGAAATAAGGAAGGTT+GGG + chr5_1:29535195-29535214 None:intergenic 35.0%
AGATGAGAAATAAGGAAGGT+TGG + chr5_1:29535196-29535215 None:intergenic 35.0%
! AAGATGAAATTCTGGAGACA+TGG + chr5_1:29535233-29535252 None:intergenic 35.0%
TGGATGAAAGTAAACAAGGT+CGG + chr5_1:29535266-29535285 None:intergenic 35.0%
TGCTTCTTTCTCTTTGTTCT+TGG - chr5_1:29535313-29535332 Msa0727260:three_prime_UTR 35.0%
! TTGTTCTTGGTTTCCTTTTC+TGG - chr5_1:29535326-29535345 Msa0727260:three_prime_UTR 35.0%
CAAACAAACCAGAAAAGGAA+GGG + chr5_1:29535423-29535442 None:intergenic 35.0%
!!! CTTTTTCTGTTGGTTTAACC+CGG - chr5_1:29535518-29535537 Msa0727260:CDS 35.0%
AGAATCTCTTTAGCAGTTTC+TGG + chr5_1:29535562-29535581 None:intergenic 35.0%
! ATTCTTTGCAGTTCTGCTTT+TGG - chr5_1:29535577-29535596 Msa0727260:CDS 35.0%
!! CTTACGAGCTTTTGTTTCAT+AGG - chr5_1:29535623-29535642 Msa0727260:CDS 35.0%
!! CTTTTGTTTCATAGGGCAAT+GGG - chr5_1:29535631-29535650 Msa0727260:CDS 35.0%
!! TTTTGTTTCATAGGGCAATG+GGG - chr5_1:29535632-29535651 Msa0727260:CDS 35.0%
!! CCTTCTAGGACAAAACAAAT+GGG + chr5_1:29535707-29535726 None:intergenic 35.0%
!! TCCTTCTAGGACAAAACAAA+TGG + chr5_1:29535708-29535727 None:intergenic 35.0%
TTTGTCCTAGAAGGATTAAC+GGG - chr5_1:29535713-29535732 Msa0727260:CDS 35.0%
!!! TTAACGGGTTTGAAGGTTTT+AGG - chr5_1:29535728-29535747 Msa0727260:CDS 35.0%
! GAGAGGATAGAGTTTTTGAT+GGG - chr5_1:29535775-29535794 Msa0727260:CDS 35.0%
!! AGAGTTTTTGATGGGTGATA+TGG - chr5_1:29535783-29535802 Msa0727260:CDS 35.0%
!! GAGTTTTTGATGGGTGATAT+GGG - chr5_1:29535784-29535803 Msa0727260:CDS 35.0%
! AATGTGATGATGACTGTGTT+TGG - chr5_1:29535850-29535869 Msa0727260:CDS 35.0%
! GAGTGATCATTTTCCTCTTT+TGG - chr5_1:29535960-29535979 Msa0727260:CDS 35.0%
!! ATCATTTTCCTCTTTTGGGT+TGG - chr5_1:29535965-29535984 Msa0727260:CDS 35.0%
! ATTTGCAAGGTGTTAGGAAA+AGG - chr5_1:29535992-29536011 Msa0727260:CDS 35.0%
AAGATGAAGAGAATGTCTGA+AGG - chr5_1:29536072-29536091 Msa0727260:intron 35.0%
!!! TGACGTTTTACTTGATTTGG+AGG - chr5_1:29536119-29536138 Msa0727260:intron 35.0%
CTGATATGATTGCAGTTCTT+TGG - chr5_1:29536163-29536182 Msa0727260:intron 35.0%
GAAGAAATTTACCGTGTTGT+TGG - chr5_1:29536381-29536400 Msa0727260:CDS 35.0%
!! CATTGTGAAAGAGGCATTAA+GGG - chr5_1:29536458-29536477 Msa0727260:CDS 35.0%
AACTGCTATGGTGAATATGT+GGG - chr5_1:29536566-29536585 Msa0727260:CDS 35.0%
GAATGAGGATGTGAGTATAA+TGG - chr5_1:29536650-29536669 Msa0727260:CDS 35.0%
! GTATAATGGGATCTGATTTG+AGG - chr5_1:29536664-29536683 Msa0727260:CDS 35.0%
!! CTTGACTTGTATGAGAAAGT+TGG - chr5_1:29536917-29536936 Msa0727260:CDS 35.0%
TTGTATGAGAAAGTTGGACA+TGG - chr5_1:29536923-29536942 Msa0727260:CDS 35.0%
AAAGTTGGACATGGATATTG+TGG - chr5_1:29536932-29536951 Msa0727260:CDS 35.0%
AAGTTGGACATGGATATTGT+GGG - chr5_1:29536933-29536952 Msa0727260:CDS 35.0%
!! TCTTTGCTTTGTTTGGCAAA+AGG - chr5_1:29536964-29536983 Msa0727260:CDS 35.0%
!! CTTTGCTTTGTTTGGCAAAA+GGG - chr5_1:29536965-29536984 Msa0727260:CDS 35.0%
!! CAAAAGGGTATTGCTAAGTA+GGG - chr5_1:29536980-29536999 Msa0727260:CDS 35.0%
!!! TGTTTTGTTGTTGACCGTTT+AGG - chr5_1:29537055-29537074 Msa0727260:CDS 35.0%
TTTAGTAGTTAAGTGGGTGT+TGG - chr5_1:29537078-29537097 Msa0727260:CDS 35.0%
TTAGTAGTTAAGTGGGTGTT+GGG - chr5_1:29537079-29537098 Msa0727260:CDS 35.0%
! ATAAGGAAGGTTGGGTTGTT+TGG + chr5_1:29535187-29535206 None:intergenic 40.0%
GATGAAAGTAAACAAGGTCG+GGG + chr5_1:29535264-29535283 None:intergenic 40.0%
GGATGAAAGTAAACAAGGTC+GGG + chr5_1:29535265-29535284 None:intergenic 40.0%
GTTTGGAAAGTGAGAGTGAA+TGG + chr5_1:29535286-29535305 None:intergenic 40.0%
GAAAGAAGCAAAGTGCAGTT+TGG + chr5_1:29535303-29535322 None:intergenic 40.0%
CCAAACAAACCAGAAAAGGA+AGG + chr5_1:29535424-29535443 None:intergenic 40.0%
!!! CCTTCCTTTTCTGGTTTGTT+TGG - chr5_1:29535421-29535440 Msa0727260:three_prime_UTR 40.0%
! GGTTTGTTTGGTATTCTCTC+AGG - chr5_1:29535433-29535452 Msa0727260:three_prime_UTR 40.0%
!! TGGCTAGTTTGGCTAAAACA+CGG + chr5_1:29535471-29535490 None:intergenic 40.0%
!!! TCGTTGATGGCTTTTTCTGT+TGG - chr5_1:29535508-29535527 Msa0727260:CDS 40.0%
!! GCTTTTGTTTCATAGGGCAA+TGG - chr5_1:29535630-29535649 Msa0727260:CDS 40.0%
!!! CCCATTTGTTTTGTCCTAGA+AGG - chr5_1:29535704-29535723 Msa0727260:CDS 40.0%
TCAAACCCGTTAATCCTTCT+AGG + chr5_1:29535721-29535740 None:intergenic 40.0%
!! AGAAGGATTAACGGGTTTGA+AGG - chr5_1:29535721-29535740 Msa0727260:CDS 40.0%
!!! GTTTGAAGGTTTTAGGAGTG+AGG - chr5_1:29535735-29535754 Msa0727260:CDS 40.0%
!! GAGTGAGGTTGGTTTGAAAA+TGG - chr5_1:29535750-29535769 Msa0727260:CDS 40.0%
!! TGAGGTTGGTTTGAAAATGG+TGG - chr5_1:29535753-29535772 Msa0727260:CDS 40.0%
! TTGGTTTGAAAATGGTGGAG+AGG - chr5_1:29535758-29535777 Msa0727260:CDS 40.0%
! GGAGAGGATAGAGTTTTTGA+TGG - chr5_1:29535774-29535793 Msa0727260:CDS 40.0%
!! TTGATGAGTTGGTGAGTGAA+GGG - chr5_1:29535911-29535930 Msa0727260:CDS 40.0%
!! AGCTGTTGGGTGTTTTTAAC+TGG - chr5_1:29535938-29535957 Msa0727260:CDS 40.0%
!!! TTTTCCTCTTTTGGGTTGGT+TGG - chr5_1:29535969-29535988 Msa0727260:CDS 40.0%
AAATCCAACCAACCCAAAAG+AGG + chr5_1:29535976-29535995 None:intergenic 40.0%
! TAGGAAAAGGTGTAGAGCTT+TGG - chr5_1:29536005-29536024 Msa0727260:CDS 40.0%
TGAAGAGAATGTCTGAAGGA+AGG - chr5_1:29536076-29536095 Msa0727260:intron 40.0%
GAAGAGAATGTCTGAAGGAA+GGG - chr5_1:29536077-29536096 Msa0727260:intron 40.0%
! TACTAGAATGGATTCTGGCT+AGG - chr5_1:29536322-29536341 Msa0727260:CDS 40.0%
! TGTGCTTTTGCTTGTATCTC+TGG + chr5_1:29536360-29536379 None:intergenic 40.0%
CTTGCAATGCATTGTGAAAG+AGG - chr5_1:29536449-29536468 Msa0727260:CDS 40.0%
!! GCATTGTGAAAGAGGCATTA+AGG - chr5_1:29536457-29536476 Msa0727260:CDS 40.0%
!! ACCAGGACCACTTTTATCAT+GGG - chr5_1:29536488-29536507 Msa0727260:CDS 40.0%
AAACGTGCCCATGATAAAAG+TGG + chr5_1:29536498-29536517 None:intergenic 40.0%
GCTGTTCATGATGTTATGGT+TGG - chr5_1:29536519-29536538 Msa0727260:CDS 40.0%
! TCCTAAAGGTACAACTGCTA+TGG - chr5_1:29536554-29536573 Msa0727260:CDS 40.0%
ACCATAGCAGTTGTACCTTT+AGG + chr5_1:29536558-29536577 None:intergenic 40.0%
CAACTGCTATGGTGAATATG+TGG - chr5_1:29536565-29536584 Msa0727260:CDS 40.0%
CACCTTCTCATCATGTGTTA+TGG + chr5_1:29536592-29536611 None:intergenic 40.0%
TAACACATGATGAGAAGGTG+TGG - chr5_1:29536592-29536611 Msa0727260:CDS 40.0%
! CTCTCTGGTTTAAACTCTTC+TGG + chr5_1:29536624-29536643 None:intergenic 40.0%
CAGAAGAGTTTAAACCAGAG+AGG - chr5_1:29536622-29536641 Msa0727260:CDS 40.0%
ACCAGAGAGGTTTATGAATG+AGG - chr5_1:29536635-29536654 Msa0727260:CDS 40.0%
TCCTCATTCATAAACCTCTC+TGG + chr5_1:29536639-29536658 None:intergenic 40.0%
! GATTTGAGGTTAGCACCATT+TGG - chr5_1:29536678-29536697 Msa0727260:CDS 40.0%
GTTTGTCCTGGAAAAGCTAT+GGG - chr5_1:29536714-29536733 Msa0727260:CDS 40.0%
! GTTTGGCTTCTGTTCATCTT+TGG - chr5_1:29536736-29536755 Msa0727260:CDS 40.0%
TCAACAGGTGAATCAACACA+TGG + chr5_1:29536795-29536814 None:intergenic 40.0%
GAAAAAACCACTTGTGTGCA+AGG - chr5_1:29536848-29536867 Msa0727260:CDS 40.0%
! ACTAACATTAGCTTAGCCCT+AGG + chr5_1:29536886-29536905 None:intergenic 40.0%
AGTTGGACATGGATATTGTG+GGG - chr5_1:29536934-29536953 Msa0727260:CDS 40.0%
!! GCAAAAGGGTATTGCTAAGT+AGG - chr5_1:29536979-29536998 Msa0727260:CDS 40.0%
GGTATTGCTAAGTAGGGTTA+TGG - chr5_1:29536986-29537005 Msa0727260:CDS 40.0%
! ATAAGGAAGGTTGGGTTGTT+TGG + chr5_1:29535187-29535206 None:intergenic 40.0%
GATGAAAGTAAACAAGGTCG+GGG + chr5_1:29535264-29535283 None:intergenic 40.0%
GGATGAAAGTAAACAAGGTC+GGG + chr5_1:29535265-29535284 None:intergenic 40.0%
GTTTGGAAAGTGAGAGTGAA+TGG + chr5_1:29535286-29535305 None:intergenic 40.0%
GAAAGAAGCAAAGTGCAGTT+TGG + chr5_1:29535303-29535322 None:intergenic 40.0%
CCAAACAAACCAGAAAAGGA+AGG + chr5_1:29535424-29535443 None:intergenic 40.0%
!!! CCTTCCTTTTCTGGTTTGTT+TGG - chr5_1:29535421-29535440 Msa0727260:three_prime_UTR 40.0%
! GGTTTGTTTGGTATTCTCTC+AGG - chr5_1:29535433-29535452 Msa0727260:three_prime_UTR 40.0%
!! TGGCTAGTTTGGCTAAAACA+CGG + chr5_1:29535471-29535490 None:intergenic 40.0%
!!! TCGTTGATGGCTTTTTCTGT+TGG - chr5_1:29535508-29535527 Msa0727260:CDS 40.0%
!! GCTTTTGTTTCATAGGGCAA+TGG - chr5_1:29535630-29535649 Msa0727260:CDS 40.0%
!!! CCCATTTGTTTTGTCCTAGA+AGG - chr5_1:29535704-29535723 Msa0727260:CDS 40.0%
TCAAACCCGTTAATCCTTCT+AGG + chr5_1:29535721-29535740 None:intergenic 40.0%
!! AGAAGGATTAACGGGTTTGA+AGG - chr5_1:29535721-29535740 Msa0727260:CDS 40.0%
!!! GTTTGAAGGTTTTAGGAGTG+AGG - chr5_1:29535735-29535754 Msa0727260:CDS 40.0%
!! GAGTGAGGTTGGTTTGAAAA+TGG - chr5_1:29535750-29535769 Msa0727260:CDS 40.0%
!! TGAGGTTGGTTTGAAAATGG+TGG - chr5_1:29535753-29535772 Msa0727260:CDS 40.0%
! TTGGTTTGAAAATGGTGGAG+AGG - chr5_1:29535758-29535777 Msa0727260:CDS 40.0%
! GGAGAGGATAGAGTTTTTGA+TGG - chr5_1:29535774-29535793 Msa0727260:CDS 40.0%
!! TTGATGAGTTGGTGAGTGAA+GGG - chr5_1:29535911-29535930 Msa0727260:CDS 40.0%
!! AGCTGTTGGGTGTTTTTAAC+TGG - chr5_1:29535938-29535957 Msa0727260:CDS 40.0%
!!! TTTTCCTCTTTTGGGTTGGT+TGG - chr5_1:29535969-29535988 Msa0727260:CDS 40.0%
AAATCCAACCAACCCAAAAG+AGG + chr5_1:29535976-29535995 None:intergenic 40.0%
! TAGGAAAAGGTGTAGAGCTT+TGG - chr5_1:29536005-29536024 Msa0727260:CDS 40.0%
TGAAGAGAATGTCTGAAGGA+AGG - chr5_1:29536076-29536095 Msa0727260:intron 40.0%
GAAGAGAATGTCTGAAGGAA+GGG - chr5_1:29536077-29536096 Msa0727260:intron 40.0%
! TACTAGAATGGATTCTGGCT+AGG - chr5_1:29536322-29536341 Msa0727260:CDS 40.0%
! TGTGCTTTTGCTTGTATCTC+TGG + chr5_1:29536360-29536379 None:intergenic 40.0%
CTTGCAATGCATTGTGAAAG+AGG - chr5_1:29536449-29536468 Msa0727260:CDS 40.0%
!! GCATTGTGAAAGAGGCATTA+AGG - chr5_1:29536457-29536476 Msa0727260:CDS 40.0%
!! ACCAGGACCACTTTTATCAT+GGG - chr5_1:29536488-29536507 Msa0727260:CDS 40.0%
AAACGTGCCCATGATAAAAG+TGG + chr5_1:29536498-29536517 None:intergenic 40.0%
GCTGTTCATGATGTTATGGT+TGG - chr5_1:29536519-29536538 Msa0727260:CDS 40.0%
! TCCTAAAGGTACAACTGCTA+TGG - chr5_1:29536554-29536573 Msa0727260:CDS 40.0%
ACCATAGCAGTTGTACCTTT+AGG + chr5_1:29536558-29536577 None:intergenic 40.0%
CAACTGCTATGGTGAATATG+TGG - chr5_1:29536565-29536584 Msa0727260:CDS 40.0%
CACCTTCTCATCATGTGTTA+TGG + chr5_1:29536592-29536611 None:intergenic 40.0%
TAACACATGATGAGAAGGTG+TGG - chr5_1:29536592-29536611 Msa0727260:CDS 40.0%
! CTCTCTGGTTTAAACTCTTC+TGG + chr5_1:29536624-29536643 None:intergenic 40.0%
CAGAAGAGTTTAAACCAGAG+AGG - chr5_1:29536622-29536641 Msa0727260:CDS 40.0%
ACCAGAGAGGTTTATGAATG+AGG - chr5_1:29536635-29536654 Msa0727260:CDS 40.0%
TCCTCATTCATAAACCTCTC+TGG + chr5_1:29536639-29536658 None:intergenic 40.0%
! GATTTGAGGTTAGCACCATT+TGG - chr5_1:29536678-29536697 Msa0727260:CDS 40.0%
GTTTGTCCTGGAAAAGCTAT+GGG - chr5_1:29536714-29536733 Msa0727260:CDS 40.0%
! GTTTGGCTTCTGTTCATCTT+TGG - chr5_1:29536736-29536755 Msa0727260:CDS 40.0%
TCAACAGGTGAATCAACACA+TGG + chr5_1:29536795-29536814 None:intergenic 40.0%
GAAAAAACCACTTGTGTGCA+AGG - chr5_1:29536848-29536867 Msa0727260:CDS 40.0%
! ACTAACATTAGCTTAGCCCT+AGG + chr5_1:29536886-29536905 None:intergenic 40.0%
AGTTGGACATGGATATTGTG+GGG - chr5_1:29536934-29536953 Msa0727260:CDS 40.0%
!! GCAAAAGGGTATTGCTAAGT+AGG - chr5_1:29536979-29536998 Msa0727260:CDS 40.0%
GGTATTGCTAAGTAGGGTTA+TGG - chr5_1:29536986-29537005 Msa0727260:CDS 40.0%
GAGAGAGAGTGAGAGAAAGA+GGG + chr5_1:29535156-29535175 None:intergenic 45.0%
AGAGAGAGAGTGAGAGAAAG+AGG + chr5_1:29535157-29535176 None:intergenic 45.0%
!!! TTCCTTTTCTGGCTTACACC+AGG - chr5_1:29535337-29535356 Msa0727260:three_prime_UTR 45.0%
!!! TTTTCTGGCTTACACCAGGT+GGG - chr5_1:29535341-29535360 Msa0727260:three_prime_UTR 45.0%
TCAGCCAAGTCTGTTATTCC+AGG - chr5_1:29535397-29535416 Msa0727260:three_prime_UTR 45.0%
AGTTTGGCTAAAACACGGTG+TGG + chr5_1:29535466-29535485 None:intergenic 45.0%
! TCGTAAGCTGACTCTTTCAC+TGG + chr5_1:29535610-29535629 None:intergenic 45.0%
! TTGCTCCATATGGAGAGTAC+TGG - chr5_1:29535656-29535675 Msa0727260:CDS 45.0%
TTCCTCCAGTACTCTCCATA+TGG + chr5_1:29535664-29535683 None:intergenic 45.0%
!!! GAAGGTTTTAGGAGTGAGGT+TGG - chr5_1:29535739-29535758 Msa0727260:CDS 45.0%
! TGGTGTTGAGCTTGATGAGT+TGG - chr5_1:29535900-29535919 Msa0727260:CDS 45.0%
!! CTTGATGAGTTGGTGAGTGA+AGG - chr5_1:29535910-29535929 Msa0727260:CDS 45.0%
! AGTGAAGGGTATGAGCTGTT+GGG - chr5_1:29535925-29535944 Msa0727260:CDS 45.0%
!! TTGGGTTGGTTGGATTTGCA+AGG - chr5_1:29535979-29535998 Msa0727260:CDS 45.0%
! GGTTGGATTTGCAAGGTGTT+AGG - chr5_1:29535986-29536005 Msa0727260:CDS 45.0%
! GTGTAGAGCTTTGGTGACAA+AGG - chr5_1:29536014-29536033 Msa0727260:CDS 45.0%
TCTGAAGGAAGGGCTATAGT+TGG - chr5_1:29536087-29536106 Msa0727260:intron 45.0%
! AGAATGGATTCTGGCTAGGA+TGG - chr5_1:29536326-29536345 Msa0727260:CDS 45.0%
CATGATAAAAGTGGTCCTGG+TGG + chr5_1:29536489-29536508 None:intergenic 45.0%
!! CACCAGGACCACTTTTATCA+TGG - chr5_1:29536487-29536506 Msa0727260:CDS 45.0%
GGTGACAAGCATGTTCCTAA+AGG - chr5_1:29536540-29536559 Msa0727260:CDS 45.0%
GGCCATAACACATGATGAGA+AGG - chr5_1:29536587-29536606 Msa0727260:CDS 45.0%
GGTTTGTCCTGGAAAAGCTA+TGG - chr5_1:29536713-29536732 Msa0727260:CDS 45.0%
TCCTGGAAAAGCTATGGGTT+TGG - chr5_1:29536719-29536738 Msa0727260:CDS 45.0%
TTGTGTGCAAGGTTGTTCCT+AGG - chr5_1:29536859-29536878 Msa0727260:CDS 45.0%
AAGGTTGTTCCTAGGACCTA+GGG - chr5_1:29536867-29536886 Msa0727260:CDS 45.0%
GACATGGATATTGTGGGGTT+TGG - chr5_1:29536939-29536958 Msa0727260:CDS 45.0%
GAGAGAGAGTGAGAGAAAGA+GGG + chr5_1:29535156-29535175 None:intergenic 45.0%
AGAGAGAGAGTGAGAGAAAG+AGG + chr5_1:29535157-29535176 None:intergenic 45.0%
!!! TTCCTTTTCTGGCTTACACC+AGG - chr5_1:29535337-29535356 Msa0727260:three_prime_UTR 45.0%
!!! TTTTCTGGCTTACACCAGGT+GGG - chr5_1:29535341-29535360 Msa0727260:three_prime_UTR 45.0%
TCAGCCAAGTCTGTTATTCC+AGG - chr5_1:29535397-29535416 Msa0727260:three_prime_UTR 45.0%
AGTTTGGCTAAAACACGGTG+TGG + chr5_1:29535466-29535485 None:intergenic 45.0%
! TCGTAAGCTGACTCTTTCAC+TGG + chr5_1:29535610-29535629 None:intergenic 45.0%
! TTGCTCCATATGGAGAGTAC+TGG - chr5_1:29535656-29535675 Msa0727260:CDS 45.0%
TTCCTCCAGTACTCTCCATA+TGG + chr5_1:29535664-29535683 None:intergenic 45.0%
!!! GAAGGTTTTAGGAGTGAGGT+TGG - chr5_1:29535739-29535758 Msa0727260:CDS 45.0%
! TGGTGTTGAGCTTGATGAGT+TGG - chr5_1:29535900-29535919 Msa0727260:CDS 45.0%
!! CTTGATGAGTTGGTGAGTGA+AGG - chr5_1:29535910-29535929 Msa0727260:CDS 45.0%
! AGTGAAGGGTATGAGCTGTT+GGG - chr5_1:29535925-29535944 Msa0727260:CDS 45.0%
!! TTGGGTTGGTTGGATTTGCA+AGG - chr5_1:29535979-29535998 Msa0727260:CDS 45.0%
! GGTTGGATTTGCAAGGTGTT+AGG - chr5_1:29535986-29536005 Msa0727260:CDS 45.0%
! GTGTAGAGCTTTGGTGACAA+AGG - chr5_1:29536014-29536033 Msa0727260:CDS 45.0%
TCTGAAGGAAGGGCTATAGT+TGG - chr5_1:29536087-29536106 Msa0727260:intron 45.0%
! AGAATGGATTCTGGCTAGGA+TGG - chr5_1:29536326-29536345 Msa0727260:CDS 45.0%
CATGATAAAAGTGGTCCTGG+TGG + chr5_1:29536489-29536508 None:intergenic 45.0%
!! CACCAGGACCACTTTTATCA+TGG - chr5_1:29536487-29536506 Msa0727260:CDS 45.0%
GGTGACAAGCATGTTCCTAA+AGG - chr5_1:29536540-29536559 Msa0727260:CDS 45.0%
GGCCATAACACATGATGAGA+AGG - chr5_1:29536587-29536606 Msa0727260:CDS 45.0%
GGTTTGTCCTGGAAAAGCTA+TGG - chr5_1:29536713-29536732 Msa0727260:CDS 45.0%
TCCTGGAAAAGCTATGGGTT+TGG - chr5_1:29536719-29536738 Msa0727260:CDS 45.0%
TTGTGTGCAAGGTTGTTCCT+AGG - chr5_1:29536859-29536878 Msa0727260:CDS 45.0%
AAGGTTGTTCCTAGGACCTA+GGG - chr5_1:29536867-29536886 Msa0727260:CDS 45.0%
GACATGGATATTGTGGGGTT+TGG - chr5_1:29536939-29536958 Msa0727260:CDS 45.0%
AAGAGGGAGAGAGAGAGTTG+CGG + chr5_1:29535140-29535159 None:intergenic 50.0%
CACCTGGTGTAAGCCAGAAA+AGG + chr5_1:29535342-29535361 None:intergenic 50.0%
!!! CTTTTCTGGCTTACACCAGG+TGG - chr5_1:29535340-29535359 Msa0727260:three_prime_UTR 50.0%
AGGGCCTGGAATAACAGACT+TGG + chr5_1:29535404-29535423 None:intergenic 50.0%
! ATTCCAGGCCCTTCCTTTTC+TGG - chr5_1:29535412-29535431 Msa0727260:three_prime_UTR 50.0%
AAACCAGAAAAGGAAGGGCC+TGG + chr5_1:29535418-29535437 None:intergenic 50.0%
! ACGGTGACTCTTGGCTAGTT+TGG + chr5_1:29535482-29535501 None:intergenic 50.0%
AAGCCATCAACGACTCAGCA+CGG + chr5_1:29535501-29535520 None:intergenic 50.0%
! GCAATGGGGTTTGCTCCATA+TGG - chr5_1:29535646-29535665 Msa0727260:CDS 50.0%
!! CTCCATATGGAGAGTACTGG+AGG - chr5_1:29535659-29535678 Msa0727260:CDS 50.0%
!! GAGAGTACTGGAGGAATCTG+AGG - chr5_1:29535668-29535687 Msa0727260:CDS 50.0%
! AGTACTGGAGGAATCTGAGG+AGG - chr5_1:29535671-29535690 Msa0727260:CDS 50.0%
GGGTGATATGGGTAGTGTTG+AGG - chr5_1:29535795-29535814 Msa0727260:CDS 50.0%
! GAGTGAAGGGTATGAGCTGT+TGG - chr5_1:29535924-29535943 Msa0727260:CDS 50.0%
GCCCATGATAAAAGTGGTCC+TGG + chr5_1:29536492-29536511 None:intergenic 50.0%
! AGGTTAGCACCATTTGGAGC+TGG - chr5_1:29536684-29536703 Msa0727260:CDS 50.0%
! TAGCACCATTTGGAGCTGGT+AGG - chr5_1:29536688-29536707 Msa0727260:CDS 50.0%
! ACCATTTGGAGCTGGTAGGA+GGG - chr5_1:29536692-29536711 Msa0727260:CDS 50.0%
! GCCAAACCCATAGCTTTTCC+AGG + chr5_1:29536723-29536742 None:intergenic 50.0%
GGAACAACCTTGCACACAAG+TGG + chr5_1:29536858-29536877 None:intergenic 50.0%
CAAGGTTGTTCCTAGGACCT+AGG - chr5_1:29536866-29536885 Msa0727260:CDS 50.0%
TTAGCTTAGCCCTAGGTCCT+AGG + chr5_1:29536879-29536898 None:intergenic 50.0%
GAGAGAGAGTTGCGGATGAA+AGG + chr5_1:29535132-29535151 None:intergenic 50.0%
AAGAGGGAGAGAGAGAGTTG+CGG + chr5_1:29535140-29535159 None:intergenic 50.0%
CACCTGGTGTAAGCCAGAAA+AGG + chr5_1:29535342-29535361 None:intergenic 50.0%
!!! CTTTTCTGGCTTACACCAGG+TGG - chr5_1:29535340-29535359 Msa0727260:three_prime_UTR 50.0%
AGGGCCTGGAATAACAGACT+TGG + chr5_1:29535404-29535423 None:intergenic 50.0%
! ATTCCAGGCCCTTCCTTTTC+TGG - chr5_1:29535412-29535431 Msa0727260:three_prime_UTR 50.0%
AAACCAGAAAAGGAAGGGCC+TGG + chr5_1:29535418-29535437 None:intergenic 50.0%
! ACGGTGACTCTTGGCTAGTT+TGG + chr5_1:29535482-29535501 None:intergenic 50.0%
AAGCCATCAACGACTCAGCA+CGG + chr5_1:29535501-29535520 None:intergenic 50.0%
! GCAATGGGGTTTGCTCCATA+TGG - chr5_1:29535646-29535665 Msa0727260:CDS 50.0%
!! CTCCATATGGAGAGTACTGG+AGG - chr5_1:29535659-29535678 Msa0727260:CDS 50.0%
!! GAGAGTACTGGAGGAATCTG+AGG - chr5_1:29535668-29535687 Msa0727260:CDS 50.0%
! AGTACTGGAGGAATCTGAGG+AGG - chr5_1:29535671-29535690 Msa0727260:CDS 50.0%
GGGTGATATGGGTAGTGTTG+AGG - chr5_1:29535795-29535814 Msa0727260:CDS 50.0%
! GAGTGAAGGGTATGAGCTGT+TGG - chr5_1:29535924-29535943 Msa0727260:CDS 50.0%
GCCCATGATAAAAGTGGTCC+TGG + chr5_1:29536492-29536511 None:intergenic 50.0%
! AGGTTAGCACCATTTGGAGC+TGG - chr5_1:29536684-29536703 Msa0727260:CDS 50.0%
! TAGCACCATTTGGAGCTGGT+AGG - chr5_1:29536688-29536707 Msa0727260:CDS 50.0%
! ACCATTTGGAGCTGGTAGGA+GGG - chr5_1:29536692-29536711 Msa0727260:CDS 50.0%
! GCCAAACCCATAGCTTTTCC+AGG + chr5_1:29536723-29536742 None:intergenic 50.0%
GGAACAACCTTGCACACAAG+TGG + chr5_1:29536858-29536877 None:intergenic 50.0%
CAAGGTTGTTCCTAGGACCT+AGG - chr5_1:29536866-29536885 Msa0727260:CDS 50.0%
TTAGCTTAGCCCTAGGTCCT+AGG + chr5_1:29536879-29536898 None:intergenic 50.0%
! TTACACCAGGTGGGCTTGCT+TGG - chr5_1:29535350-29535369 Msa0727260:three_prime_UTR 55.0%
! TACACCAGGTGGGCTTGCTT+GGG - chr5_1:29535351-29535370 Msa0727260:three_prime_UTR 55.0%
TCACCGTGCTGAGTCGTTGA+TGG - chr5_1:29535495-29535514 Msa0727260:CDS 55.0%
! GCATTAAGGGTGCATCCACC+AGG - chr5_1:29536471-29536490 Msa0727260:CDS 55.0%
! CACCATTTGGAGCTGGTAGG+AGG - chr5_1:29536691-29536710 Msa0727260:CDS 55.0%
ACCCTCCTACCAGCTCCAAA+TGG + chr5_1:29536696-29536715 None:intergenic 55.0%
! TTACACCAGGTGGGCTTGCT+TGG - chr5_1:29535350-29535369 Msa0727260:three_prime_UTR 55.0%
! TACACCAGGTGGGCTTGCTT+GGG - chr5_1:29535351-29535370 Msa0727260:three_prime_UTR 55.0%
TCACCGTGCTGAGTCGTTGA+TGG - chr5_1:29535495-29535514 Msa0727260:CDS 55.0%
! GCATTAAGGGTGCATCCACC+AGG - chr5_1:29536471-29536490 Msa0727260:CDS 55.0%
! CACCATTTGGAGCTGGTAGG+AGG - chr5_1:29536691-29536710 Msa0727260:CDS 55.0%
ACCCTCCTACCAGCTCCAAA+TGG + chr5_1:29536696-29536715 None:intergenic 55.0%
AAAGCCCAAGCAAGCCCACC+TGG + chr5_1:29535358-29535377 None:intergenic 60.0%
CGACTCAGCACGGTGACTCT+TGG + chr5_1:29535491-29535510 None:intergenic 60.0%
GCTGGTAGGAGGGTTTGTCC+TGG - chr5_1:29536702-29536721 Msa0727260:CDS 60.0%
AAAGCCCAAGCAAGCCCACC+TGG + chr5_1:29535358-29535377 None:intergenic 60.0%
CGACTCAGCACGGTGACTCT+TGG + chr5_1:29535491-29535510 None:intergenic 60.0%
GCTGGTAGGAGGGTTTGTCC+TGG - chr5_1:29536702-29536721 Msa0727260:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 29535131 29537224 29535131 ID=Msa0727260;Name=Msa0727260
chr5_1 mRNA 29535131 29537224 29535131 ID=Msa0727260-mRNA-1;Parent=Msa0727260;Name=Msa0727260-mRNA-1;_AED=0.02;_eAED=0.02;_QI=101|1|1|1|1|1|2|337|518
chr5_1 exon 29535131 29536070 29535131 ID=Msa0727260-mRNA-1:exon:10051;Parent=Msa0727260-mRNA-1
chr5_1 exon 29536170 29537224 29536170 ID=Msa0727260-mRNA-1:exon:10050;Parent=Msa0727260-mRNA-1
chr5_1 five_prime_UTR 29537124 29537224 29537124 ID=Msa0727260-mRNA-1:five_prime_utr;Parent=Msa0727260-mRNA-1
chr5_1 CDS 29536170 29537123 29536170 ID=Msa0727260-mRNA-1:cds;Parent=Msa0727260-mRNA-1
chr5_1 CDS 29535468 29536070 29535468 ID=Msa0727260-mRNA-1:cds;Parent=Msa0727260-mRNA-1
chr5_1 three_prime_UTR 29535131 29535467 29535131 ID=Msa0727260-mRNA-1:three_prime_utr;Parent=Msa0727260-mRNA-1
Gene Sequence

>Msa0727260

ATGTCTCCAGAATTTCATCTTCTTCTCTTCCCCGACCTTGTTTACTTTCATCCATTCACTCTCACTTTCCAAACTGCACTTTGCTTCTTTCTCTTTGTTCTTGGTTTCCTTTTCTGGCTTACACCAGGTGGGCTTGCTTGGGCTTTATATAATAAAGCTTCATCTTCAGCCAAGTCTGTTATTCCAGGCCCTTCCTTTTCTGGTTTGTTTGGTATTCTCTCAGGTCAAACACCACACCGTGTTTTAGCCAAACTAGCCAAGAGTCACCGTGCTGAGTCGTTGATGGCTTTTTCTGTTGGTTTAACCCGGTTCATTATTTCAAGTGAACCAGAAACTGCTAAAGAGATTCTTTGCAGTTCTGCTTTTGGTGATAGACCAGTGAAAGAGTCAGCTTACGAGCTTTTGTTTCATAGGGCAATGGGGTTTGCTCCATATGGAGAGTACTGGAGGAATCTGAGGAGGATTTCTTCAACCCATTTGTTTTGTCCTAGAAGGATTAACGGGTTTGAAGGTTTTAGGAGTGAGGTTGGTTTGAAAATGGTGGAGAGGATAGAGTTTTTGATGGGTGATATGGGTAGTGTTGAGGTGAAAAAAGTGCTTCATTTTGGATCACTTAATAATGTGATGATGACTGTGTTTGGCAAATGTTATGATTTCTTTGATGGTGATGGTGTTGAGCTTGATGAGTTGGTGAGTGAAGGGTATGAGCTGTTGGGTGTTTTTAACTGGAGTGATCATTTTCCTCTTTTGGGTTGGTTGGATTTGCAAGGTGTTAGGAAAAGGTGTAGAGCTTTGGTGACAAAGGTTAATGCTTTTGTTGGAAAGATAATAGAGGAGCATAAGATGAAGAGAATGTCTGAAGGAAGGGCTATAGTTGGTGATTTTGTTGACGTTTTACTTGATTTGGAGGAAAAAGACAAGCTCAGTGATTCTGATATGATTGCAGTTCTTTGGGAAATGATTTTCAGAGGAACAGACACAGTAGCAATATTACTAGAATGGATTCTGGCTAGGATGGTGCTTCATCCAGAGATACAAGCAAAAGCACAAGAAGAAATTTACCGTGTTGTTGGAAATTCTAAAGTTATCACTGATGTTGATGTTCAAAAAATGTGTTACTTGCAATGCATTGTGAAAGAGGCATTAAGGGTGCATCCACCAGGACCACTTTTATCATGGGCACGTTTAGCTGTTCATGATGTTATGGTTGGTGACAAGCATGTTCCTAAAGGTACAACTGCTATGGTGAATATGTGGGCCATAACACATGATGAGAAGGTGTGGAATGAGCCAGAAGAGTTTAAACCAGAGAGGTTTATGAATGAGGATGTGAGTATAATGGGATCTGATTTGAGGTTAGCACCATTTGGAGCTGGTAGGAGGGTTTGTCCTGGAAAAGCTATGGGTTTGGCTTCTGTTCATCTTTGGCTTGCTCAGTTACTTCATAACTTCAAATGGGTTCCATGTGTTGATTCACCTGTTGATTTAGATGAATGTCTTAAGCTTTCTATGGAGATGAAAAAACCACTTGTGTGCAAGGTTGTTCCTAGGACCTAG
Protein sequence

>Msa0727260

MSPEFHLLLFPDLVYFHPFTLTFQTALCFFLFVLGFLFWLTPGGLAWALYNKASSSAKSVIPGPSFSGLFGILSGQTPHRVLAKLAKSHRAESLMAFSVGLTRFIISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRSEVGLKMVERIEFLMGDMGSVEVKKVLHFGSLNNVMMTVFGKCYDFFDGDGVELDELVSEGYELLGVFNWSDHFPLLGWLDLQGVRKRCRALVTKVNAFVGKIIEEHKMKRMSEGRAIVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQEEIYRVVGNSKVITDVDVQKMCYLQCIVKEALRVHPPGPLLSWARLAVHDVMVGDKHVPKGTTAMVNMWAITHDEKVWNEPEEFKPERFMNEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASVHLWLAQLLHNFKWVPCVDSPVDLDECLKLSMEMKKPLVCKVVPRT*