AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033026

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033026.t1 MTR_4g112670 80.597 335 62 2 1 333 1 334 0.0 545
MS.gene033026.t1 MTR_4g112650 73.731 335 85 2 2 334 1 334 0.0 511
MS.gene033026.t1 MTR_4g112630 71.810 337 81 3 2 335 1 326 1.08e-172 482
MS.gene033026.t1 MTR_4g112620 69.822 338 60 5 1 334 1 300 5.17e-163 457
MS.gene033026.t1 MTR_2g058450 52.922 308 143 2 27 333 28 334 2.33e-106 314
MS.gene033026.t1 MTR_0003s0530 77.901 181 38 1 147 325 1 181 8.98e-97 285
MS.gene033026.t1 MTR_7g490330 40.000 330 173 5 11 334 14 324 5.62e-72 226
MS.gene033026.t1 MTR_7g490350 38.006 321 169 4 39 334 53 368 2.21e-71 226
MS.gene033026.t1 MTR_2g058410 50.862 232 113 1 104 334 1 232 2.24e-68 214
MS.gene033026.t1 MTR_5g091980 37.901 343 182 5 2 334 1 322 2.42e-68 217
MS.gene033026.t1 MTR_7g090300 38.272 324 166 7 38 334 52 368 1.99e-66 213
MS.gene033026.t1 MTR_2g087780 36.765 340 177 8 26 333 60 393 5.93e-64 207
MS.gene033026.t1 MTR_7g090320 35.522 335 181 7 29 329 48 381 8.10e-64 207
MS.gene033026.t1 MTR_4g050190 36.778 329 171 7 37 334 68 390 6.10e-63 205
MS.gene033026.t1 MTR_2g099030 36.826 334 181 5 27 331 70 402 3.53e-62 203
MS.gene033026.t1 MTR_4g112840 93.069 101 7 0 174 274 56 156 8.42e-61 192
MS.gene033026.t1 MTR_7g090310 35.312 320 173 6 39 325 58 376 1.39e-59 196
MS.gene033026.t1 MTR_5g077620 73.864 88 20 3 4 91 1 85 4.16e-34 122
MS.gene033026.t1 MTR_5g077620 74.419 43 11 0 279 321 76 118 1.22e-12 65.1
MS.gene033026.t1 MTR_8g074170 34.783 230 125 5 39 268 78 282 6.21e-29 115
MS.gene033026.t1 MTR_8g074270 33.913 230 127 5 39 268 78 282 7.66e-28 112
MS.gene033026.t1 MTR_8g074210 32.906 234 128 7 37 268 76 282 8.91e-28 112
MS.gene033026.t1 MTR_2g042430 33.476 233 121 9 40 268 77 279 2.23e-23 99.8
MS.gene033026.t1 MTR_2g042370 33.476 233 122 9 40 268 65 268 8.42e-23 97.8
MS.gene033026.t1 MTR_2g042420 33.047 233 122 9 40 268 58 260 2.18e-22 96.7
MS.gene033026.t1 MTR_2g058430 45.378 119 44 2 77 183 43 152 1.87e-20 89.7
MS.gene033026.t1 MTR_1g075865 39.252 107 64 1 151 256 4 110 4.01e-17 77.0
MS.gene033026.t1 MTR_5g093640 45.918 98 7 2 238 335 52 103 2.11e-15 71.6
MS.gene033026.t1 MTR_8g074320 35.433 127 77 3 101 224 95 219 7.39e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033026.t1 AT3G57030 40.373 322 162 5 38 333 55 372 3.67e-73 231
MS.gene033026.t1 AT1G74010 42.345 307 165 7 28 332 26 322 3.27e-71 224
MS.gene033026.t1 AT1G74020 41.424 309 168 7 28 333 27 325 1.47e-70 223
MS.gene033026.t1 AT1G74000 40.453 309 171 7 28 333 29 327 3.53e-69 219
MS.gene033026.t1 AT1G08470 37.920 327 169 6 37 334 67 388 1.54e-66 214
MS.gene033026.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene033026.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene033026.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene033026.t1 AT3G57010 37.818 275 152 5 8 270 11 278 9.72e-64 207
MS.gene033026.t1 AT2G41290 38.906 329 162 11 39 333 51 374 2.10e-62 203
MS.gene033026.t1 AT3G57020 40.816 245 135 4 33 274 47 284 3.23e-61 200
MS.gene033026.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene033026.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene033026.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene033026.t1 AT2G41300 32.919 322 177 4 34 326 73 384 1.29e-55 186
MS.gene033026.t1 AT3G57020 38.367 245 127 3 33 274 47 270 6.44e-55 183
MS.gene033026.t1 AT3G51420 26.316 304 181 9 17 311 40 309 5.49e-21 92.8
MS.gene033026.t1 AT3G51440 29.487 234 137 6 40 270 70 278 6.29e-20 89.7
MS.gene033026.t1 AT3G51430 27.306 271 163 8 40 309 70 307 3.22e-19 87.8
MS.gene033026.t1 AT3G51430 28.448 232 142 6 40 270 70 278 7.17e-19 87.0
MS.gene033026.t1 AT3G51450 28.511 235 138 7 40 270 70 278 1.04e-17 83.6

Find 79 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTGAAGAAACCTTTATT+TGG 0.157597 8.2:-15902539 None:intergenic
GGAACTCAAGGGGCCAATTT+TGG 0.185598 8.2:+15903589 MS.gene033026:CDS
TATATAGCTGATGCTTATTA+TGG 0.208516 8.2:+15903065 MS.gene033026:CDS
GAGTTCCTCTTAATGTTATT+TGG 0.230197 8.2:-15903573 None:intergenic
ATTAGCAATCATGTTGAATA+TGG 0.257587 8.2:+15902331 None:intergenic
CTTGTGCAGGTCCAACTAAT+TGG 0.262161 8.2:-15903124 None:intergenic
AAATATGTTGGCCCAAATAA+AGG 0.281891 8.2:+15902527 MS.gene033026:CDS
TACTGTGTTTGCTGATGGTT+TGG 0.288431 8.2:+15903154 MS.gene033026:CDS
AAATAAATGATTCCAGTGTT+TGG 0.305353 8.2:-15903185 None:intergenic
TATTCACTGAAATCCAAAAT+TGG 0.308405 8.2:-15903602 None:intergenic
TGCTTATTATGGACTACTTA+TGG 0.309237 8.2:+15903076 MS.gene033026:CDS
TTGGGTTGCTTTCCCTCCAT+TGG 0.330957 8.2:-15903105 None:intergenic
GAATTATTCATGCTGCTTGC+TGG 0.332845 8.2:+15903546 MS.gene033026:CDS
CCACACTTTCCGAACTTTGA+AGG 0.347530 8.2:-15903496 None:intergenic
CCAACATGTGGGAGGCCATT+AGG 0.355169 8.2:+15903011 MS.gene033026:CDS
AATAAATGATTCCAGTGTTT+GGG 0.362007 8.2:-15903184 None:intergenic
CCTTGAAGAAACCTTTATTT+GGG 0.367638 8.2:-15902538 None:intergenic
TGAAATATTAGTTACCTGTT+TGG 0.368413 8.2:-15902578 None:intergenic
GTATCTCTTCCTGCTGAGTA+TGG 0.370089 8.2:+15903711 MS.gene033026:CDS
AATTTCTATCCTTCAAAGTT+CGG 0.390884 8.2:+15903487 MS.gene033026:CDS
CCCAAATAAAGGTTTCTTCA+AGG 0.401202 8.2:+15902538 MS.gene033026:CDS
TGGGTTGCTTTCCCTCCATT+GGG 0.406224 8.2:-15903104 None:intergenic
AATTCTGATGAATTTGCTCT+TGG 0.423029 8.2:-15903528 None:intergenic
GAAGACCAAATAACATTAAG+AGG 0.431967 8.2:+15903568 MS.gene033026:CDS
GAGTACAATGGAACACTCTA+TGG 0.432828 8.2:+15903759 MS.gene033026:CDS
AGCAATCTTGCAGTGCCAAC+TGG 0.441501 8.2:+15903423 MS.gene033026:CDS
TCAGTCACTCTGACTCCTAT+AGG 0.446798 8.2:-15903666 None:intergenic
TGCTTAGCAACACTGTTGTT+TGG 0.449793 8.2:-15903404 None:intergenic
TTCGTACGTCTTGGAGATCC+TGG 0.460847 8.2:-15903639 None:intergenic
CTACTTATGGTTGGTCCCAA+TGG 0.466876 8.2:+15903089 MS.gene033026:CDS
TGCTAGGATCATATCTCAAT+AGG 0.467290 8.2:-15903377 None:intergenic
TTGTGCAGGTCCAACTAATT+GGG 0.468485 8.2:-15903123 None:intergenic
ATGCTTACACTTCTCCAAAC+AGG 0.470208 8.2:+15902564 MS.gene033026:CDS
GTAGACAGTGGAGATCATTC+AGG 0.470599 8.2:+15903351 MS.gene033026:CDS
CCTTATGTTGGCTCCTCTGA+TGG 0.473712 8.2:+15902494 MS.gene033026:CDS
AATTCTACTGTGTTTGCTGA+TGG 0.478552 8.2:+15903149 MS.gene033026:CDS
TATTATGGACTACTTATGGT+TGG 0.479374 8.2:+15903080 MS.gene033026:CDS
AGACGTACGAATTTGCCTAT+AGG 0.484988 8.2:+15903651 MS.gene033026:CDS
TGATTGAAACTCAATCCTAA+TGG 0.492488 8.2:-15903026 None:intergenic
CAAACTATGCTTACTTGAGC+TGG 0.495674 8.2:-15903229 None:intergenic
TCAGGTCCTGTCACTGGTGG+TGG 0.498527 8.2:-15902440 None:intergenic
GGGAAAGCAACCCAATTAGT+TGG 0.500291 8.2:+15903113 MS.gene033026:CDS
TAGCAACACTGTTGTTTGGT+TGG 0.501427 8.2:-15903400 None:intergenic
TGCTAGCATAAGAAGCAAGC+AGG 0.502038 8.2:-15903788 None:intergenic
AGTAATATAGCTACTGATGA+TGG 0.504220 8.2:-15902401 None:intergenic
AGTGACTCAGGTCCTGTCAC+TGG 0.505698 8.2:-15902446 None:intergenic
ACTGTTGTTTGGTTGGTGCT+AGG 0.506451 8.2:-15903393 None:intergenic
CCATCAGAGGAGCCAACATA+AGG 0.508307 8.2:-15902494 None:intergenic
ATAGGCAAATTCGTACGTCT+TGG 0.509028 8.2:-15903648 None:intergenic
ATGGCCTCCCACATGTTGGT+TGG 0.525902 8.2:-15903007 None:intergenic
TTATCGAATGCAAGTGACTC+AGG 0.528312 8.2:-15902458 None:intergenic
ACAGTAGAATTGACTTGTGC+AGG 0.530441 8.2:-15903137 None:intergenic
ATAACATTAAGAGGAACTCA+AGG 0.531400 8.2:+15903577 MS.gene033026:CDS
TTTGAAAATTCTTCCATCAG+AGG 0.540669 8.2:-15902507 None:intergenic
GTTCGGAAAGTGTGGCTGAA+AGG 0.546561 8.2:+15903504 MS.gene033026:CDS
CAGCTACCACCACCAGTGAC+AGG 0.551193 8.2:+15902434 MS.gene033026:CDS
CTACTGACTGCCACACCAGT+TGG 0.554129 8.2:-15903438 None:intergenic
GACTCAGGTCCTGTCACTGG+TGG 0.566671 8.2:-15902443 None:intergenic
CTTATGGTTGGTCCCAATGG+AGG 0.566947 8.2:+15903092 MS.gene033026:CDS
AACGGTGAAGGACCTTATGT+TGG 0.580918 8.2:+15902482 MS.gene033026:CDS
CCTTCAAAGTTCGGAAAGTG+TGG 0.581970 8.2:+15903496 MS.gene033026:CDS
TCAGCACTCCAACCAACATG+TGG 0.583888 8.2:+15902999 MS.gene033026:CDS
CCTAATGGCCTCCCACATGT+TGG 0.588145 8.2:-15903011 None:intergenic
GGTGTGGCAGTCAGTAGAGA+TGG 0.589991 8.2:+15903444 MS.gene033026:CDS
TTATGGTTGGTCCCAATGGA+GGG 0.592491 8.2:+15903093 MS.gene033026:CDS
GCTAGCATAAGAAGCAAGCA+GGG 0.596924 8.2:-15903787 None:intergenic
AGTTGAGTACCATACTCAGC+AGG 0.600382 8.2:-15903720 None:intergenic
TAACATTAAGAGGAACTCAA+GGG 0.618426 8.2:+15903578 MS.gene033026:CDS
TTGGATATAGACCCAAACAC+TGG 0.627976 8.2:+15903173 MS.gene033026:CDS
TTTCTCAAACTGGTAGACAG+TGG 0.638164 8.2:+15903339 MS.gene033026:CDS
AGGAACAAGACAGTCTGTGA+TGG 0.642304 8.2:+15902963 MS.gene033026:intron
AATCATGTTGAATATGGCAA+TGG 0.644300 8.2:+15902337 None:intergenic
AGTGAGGTTCAAGAGTACAA+TGG 0.650500 8.2:+15903747 MS.gene033026:CDS
AACATTAAGAGGAACTCAAG+GGG 0.655990 8.2:+15903579 MS.gene033026:CDS
CACTCCAACCAACATGTGGG+AGG 0.658905 8.2:+15903003 MS.gene033026:CDS
TCTTGCAGTGCCAACTGGTG+TGG 0.670889 8.2:+15903428 MS.gene033026:CDS
TGGTACTCAACTAAGTAGTG+AGG 0.675669 8.2:+15903731 MS.gene033026:CDS
TACAATGGAACACTCTATGG+TGG 0.677070 8.2:+15903762 MS.gene033026:CDS
CAGCACTCCAACCAACATGT+GGG 0.683867 8.2:+15903000 MS.gene033026:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAGTAAAAAGAAAA+GGG - chr8.2:15902782-15902801 None:intergenic 10.0%
!! TATAAAAAAGTAAAAAGAAA+AGG - chr8.2:15902783-15902802 None:intergenic 10.0%
!!! TAATACATTTTTTTTTTGAA+AGG - chr8.2:15902622-15902641 None:intergenic 10.0%
!!! AATTACTTCTATTTTTTATC+AGG + chr8.2:15902943-15902962 MS.gene033026:intron 15.0%
!!! TAGTACTTTTACAAAATAAA+TGG - chr8.2:15902713-15902732 None:intergenic 15.0%
!!! ATTTCAGTGAATAGTTTTTT+AGG + chr8.2:15903612-15903631 MS.gene033026:CDS 20.0%
! AAATAAATGATTCCAGTGTT+TGG - chr8.2:15903188-15903207 None:intergenic 25.0%
! AATAAATGATTCCAGTGTTT+GGG - chr8.2:15903187-15903206 None:intergenic 25.0%
! AATTTCTATCCTTCAAAGTT+CGG + chr8.2:15903487-15903506 MS.gene033026:CDS 25.0%
! ATGAAAGTAAAAGCAGAAAA+TGG + chr8.2:15902912-15902931 MS.gene033026:intron 25.0%
! GATTCACACAAAAAATAAGA+AGG - chr8.2:15902871-15902890 None:intergenic 25.0%
! TATATAGCTGATGCTTATTA+TGG + chr8.2:15903065-15903084 MS.gene033026:CDS 25.0%
! TATTCACTGAAATCCAAAAT+TGG - chr8.2:15903605-15903624 None:intergenic 25.0%
! TGAAATATTAGTTACCTGTT+TGG - chr8.2:15902581-15902600 None:intergenic 25.0%
!! GGAAGAATTTTCAAATATGT+TGG + chr8.2:15902515-15902534 MS.gene033026:CDS 25.0%
!!! ACATCACTTGATTTTTTGTA+GGG + chr8.2:15903314-15903333 MS.gene033026:intron 25.0%
!!! TTTTTTTTTGAAAGGAGAAC+TGG - chr8.2:15902614-15902633 None:intergenic 25.0%
AAATATGTTGGCCCAAATAA+AGG + chr8.2:15902527-15902546 MS.gene033026:CDS 30.0%
AAATGGTCACTTAACTCATT+AGG - chr8.2:15902696-15902715 None:intergenic 30.0%
ACGAACTATATAGAAAACAC+TGG + chr8.2:15902834-15902853 MS.gene033026:intron 30.0%
AGTAATATAGCTACTGATGA+TGG - chr8.2:15902404-15902423 None:intergenic 30.0%
ATAACATTAAGAGGAACTCA+AGG + chr8.2:15903577-15903596 MS.gene033026:CDS 30.0%
GAAGACCAAATAACATTAAG+AGG + chr8.2:15903568-15903587 MS.gene033026:CDS 30.0%
GAGTTCCTCTTAATGTTATT+TGG - chr8.2:15903576-15903595 None:intergenic 30.0%
TAACATTAAGAGGAACTCAA+GGG + chr8.2:15903578-15903597 MS.gene033026:CDS 30.0%
TCACTTGCATTCGATAAAAA+CGG + chr8.2:15902464-15902483 MS.gene033026:CDS 30.0%
TCCTTGAAGAAACCTTTATT+TGG - chr8.2:15902542-15902561 None:intergenic 30.0%
TGATTGAAACTCAATCCTAA+TGG - chr8.2:15903029-15903048 None:intergenic 30.0%
TTGTTACTGTAATGCTGAAT+TGG - chr8.2:15903288-15903307 None:intergenic 30.0%
TTTGAAAATTCTTCCATCAG+AGG - chr8.2:15902510-15902529 None:intergenic 30.0%
! AATTCTGATGAATTTGCTCT+TGG - chr8.2:15903531-15903550 None:intergenic 30.0%
! CCTTGAAGAAACCTTTATTT+GGG - chr8.2:15902541-15902560 None:intergenic 30.0%
! TATTATGGACTACTTATGGT+TGG + chr8.2:15903080-15903099 MS.gene033026:CDS 30.0%
! TGCTTATTATGGACTACTTA+TGG + chr8.2:15903076-15903095 MS.gene033026:CDS 30.0%
! TGTTTTCTATATAGTTCGTG+AGG - chr8.2:15902833-15902852 None:intergenic 30.0%
!! TCTTAGCTTTAGTGGTAAAA+AGG - chr8.2:15902810-15902829 None:intergenic 30.0%
!!! CACATCACTTGATTTTTTGT+AGG + chr8.2:15903313-15903332 MS.gene033026:intron 30.0%
!!! CAGTGAATAGTTTTTTAGGA+CGG + chr8.2:15903616-15903635 MS.gene033026:CDS 30.0%
AAAGGAGAACTGGCTAATAT+TGG - chr8.2:15902604-15902623 None:intergenic 35.0%
AACATTAAGAGGAACTCAAG+GGG + chr8.2:15903579-15903598 MS.gene033026:CDS 35.0%
CCCAAATAAAGGTTTCTTCA+AGG + chr8.2:15902538-15902557 MS.gene033026:CDS 35.0%
GTAATGCTGAATTGGCATTT+AGG - chr8.2:15903280-15903299 None:intergenic 35.0%
TGCTAGGATCATATCTCAAT+AGG - chr8.2:15903380-15903399 None:intergenic 35.0%
! AATTCTACTGTGTTTGCTGA+TGG + chr8.2:15903149-15903168 MS.gene033026:CDS 35.0%
! TTGTAGGGATTTTCTCAAAC+TGG + chr8.2:15903329-15903348 MS.gene033026:intron 35.0%
AGACGTACGAATTTGCCTAT+AGG + chr8.2:15903651-15903670 MS.gene033026:CDS 40.0%
ATAGGCAAATTCGTACGTCT+TGG - chr8.2:15903651-15903670 None:intergenic 40.0%
ATGCTTACACTTCTCCAAAC+AGG + chr8.2:15902564-15902583 MS.gene033026:CDS 40.0%
CAAACTATGCTTACTTGAGC+TGG - chr8.2:15903232-15903251 None:intergenic 40.0%
GAGTACAATGGAACACTCTA+TGG + chr8.2:15903759-15903778 MS.gene033026:CDS 40.0%
GCATTCGATAAAAACGGTGA+AGG + chr8.2:15902470-15902489 MS.gene033026:CDS 40.0%
TACAATGGAACACTCTATGG+TGG + chr8.2:15903762-15903781 MS.gene033026:CDS 40.0%
TGCTTAGCAACACTGTTGTT+TGG - chr8.2:15903407-15903426 None:intergenic 40.0%
TGGTACTCAACTAAGTAGTG+AGG + chr8.2:15903731-15903750 MS.gene033026:CDS 40.0%
TTATCGAATGCAAGTGACTC+AGG - chr8.2:15902461-15902480 None:intergenic 40.0%
TTGGATATAGACCCAAACAC+TGG + chr8.2:15903173-15903192 MS.gene033026:CDS 40.0%
TTGTGCAGGTCCAACTAATT+GGG - chr8.2:15903126-15903145 None:intergenic 40.0%
TTTCTCAAACTGGTAGACAG+TGG + chr8.2:15903339-15903358 MS.gene033026:CDS 40.0%
! AGTGAGGTTCAAGAGTACAA+TGG + chr8.2:15903747-15903766 MS.gene033026:CDS 40.0%
! GAATTATTCATGCTGCTTGC+TGG + chr8.2:15903546-15903565 MS.gene033026:CDS 40.0%
! TACTGTGTTTGCTGATGGTT+TGG + chr8.2:15903154-15903173 MS.gene033026:CDS 40.0%
! TAGCAACACTGTTGTTTGGT+TGG - chr8.2:15903403-15903422 None:intergenic 40.0%
!! ACAGTAGAATTGACTTGTGC+AGG - chr8.2:15903140-15903159 None:intergenic 40.0%
!!! AATAGTTTTTTAGGACGGCC+AGG + chr8.2:15903621-15903640 MS.gene033026:CDS 40.0%
AACGGTGAAGGACCTTATGT+TGG + chr8.2:15902482-15902501 MS.gene033026:CDS 45.0%
AGGAACAAGACAGTCTGTGA+TGG + chr8.2:15902963-15902982 MS.gene033026:intron 45.0%
AGTTGAGTACCATACTCAGC+AGG - chr8.2:15903723-15903742 None:intergenic 45.0%
CCACACTTTCCGAACTTTGA+AGG - chr8.2:15903499-15903518 None:intergenic 45.0%
CCTTCAAAGTTCGGAAAGTG+TGG + chr8.2:15903496-15903515 MS.gene033026:CDS 45.0%
CTTGTGCAGGTCCAACTAAT+TGG - chr8.2:15903127-15903146 None:intergenic 45.0%
GCTAGCATAAGAAGCAAGCA+GGG - chr8.2:15903790-15903809 None:intergenic 45.0%
GGGAAAGCAACCCAATTAGT+TGG + chr8.2:15903113-15903132 MS.gene033026:CDS 45.0%
GTAGACAGTGGAGATCATTC+AGG + chr8.2:15903351-15903370 MS.gene033026:CDS 45.0%
GTATCTCTTCCTGCTGAGTA+TGG + chr8.2:15903711-15903730 MS.gene033026:CDS 45.0%
TCAGTCACTCTGACTCCTAT+AGG - chr8.2:15903669-15903688 None:intergenic 45.0%
TGCTAGCATAAGAAGCAAGC+AGG - chr8.2:15903791-15903810 None:intergenic 45.0%
! ACTGTTGTTTGGTTGGTGCT+AGG - chr8.2:15903396-15903415 None:intergenic 45.0%
! CTACTTATGGTTGGTCCCAA+TGG + chr8.2:15903089-15903108 MS.gene033026:CDS 45.0%
! TTATGGTTGGTCCCAATGGA+GGG + chr8.2:15903093-15903112 MS.gene033026:CDS 45.0%
!! TCGTGAGGTCTTAGCTTTAG+TGG - chr8.2:15902818-15902837 None:intergenic 45.0%
AGCAATCTTGCAGTGCCAAC+TGG + chr8.2:15903423-15903442 MS.gene033026:CDS 50.0%
CAGCACTCCAACCAACATGT+GGG + chr8.2:15903000-15903019 MS.gene033026:CDS 50.0%
CCATCAGAGGAGCCAACATA+AGG - chr8.2:15902497-15902516 None:intergenic 50.0%
TCAGCACTCCAACCAACATG+TGG + chr8.2:15902999-15903018 MS.gene033026:CDS 50.0%
TTCGTACGTCTTGGAGATCC+TGG - chr8.2:15903642-15903661 None:intergenic 50.0%
! CTTATGGTTGGTCCCAATGG+AGG + chr8.2:15903092-15903111 MS.gene033026:CDS 50.0%
! GGAACTCAAGGGGCCAATTT+TGG + chr8.2:15903589-15903608 MS.gene033026:CDS 50.0%
! GTTCGGAAAGTGTGGCTGAA+AGG + chr8.2:15903504-15903523 MS.gene033026:CDS 50.0%
! TGGGTTGCTTTCCCTCCATT+GGG - chr8.2:15903107-15903126 None:intergenic 50.0%
! TTGGGTTGCTTTCCCTCCAT+TGG - chr8.2:15903108-15903127 None:intergenic 50.0%
!! CCTTATGTTGGCTCCTCTGA+TGG + chr8.2:15902494-15902513 MS.gene033026:CDS 50.0%
AGTGACTCAGGTCCTGTCAC+TGG - chr8.2:15902449-15902468 None:intergenic 55.0%
ATGGCCTCCCACATGTTGGT+TGG - chr8.2:15903010-15903029 None:intergenic 55.0%
CACTCCAACCAACATGTGGG+AGG + chr8.2:15903003-15903022 MS.gene033026:CDS 55.0%
CCAACATGTGGGAGGCCATT+AGG + chr8.2:15903011-15903030 MS.gene033026:CDS 55.0%
CCTAATGGCCTCCCACATGT+TGG - chr8.2:15903014-15903033 None:intergenic 55.0%
GGTGTGGCAGTCAGTAGAGA+TGG + chr8.2:15903444-15903463 MS.gene033026:CDS 55.0%
TCTTGCAGTGCCAACTGGTG+TGG + chr8.2:15903428-15903447 MS.gene033026:CDS 55.0%
! CTACTGACTGCCACACCAGT+TGG - chr8.2:15903441-15903460 None:intergenic 55.0%
CAGCTACCACCACCAGTGAC+AGG + chr8.2:15902434-15902453 MS.gene033026:CDS 60.0%
GACTCAGGTCCTGTCACTGG+TGG - chr8.2:15902446-15902465 None:intergenic 60.0%
TCAGGTCCTGTCACTGGTGG+TGG - chr8.2:15902443-15902462 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 15902341 15903824 15902341 ID=MS.gene033026
chr8.2 mRNA 15902341 15903824 15902341 ID=MS.gene033026.t1;Parent=MS.gene033026
chr8.2 exon 15902341 15902585 15902341 ID=MS.gene033026.t1.exon1;Parent=MS.gene033026.t1
chr8.2 CDS 15902341 15902585 15902341 ID=cds.MS.gene033026.t1;Parent=MS.gene033026.t1
chr8.2 exon 15902965 15903237 15902965 ID=MS.gene033026.t1.exon2;Parent=MS.gene033026.t1
chr8.2 CDS 15902965 15903237 15902965 ID=cds.MS.gene033026.t1;Parent=MS.gene033026.t1
chr8.2 exon 15903335 15903824 15903335 ID=MS.gene033026.t1.exon3;Parent=MS.gene033026.t1
chr8.2 CDS 15903335 15903824 15903335 ID=cds.MS.gene033026.t1;Parent=MS.gene033026.t1
Gene Sequence

>MS.gene033026

ATGTTGAATATGGCAATGGTTGTGACTGCAACTACTCTTGTTATCTTACTGTTGTGTTCTCCATCATCAGTAGCTATATTACTGAACAAGCTTCAGCTACCACCACCAGTGACAGGACCTGAGTCACTTGCATTCGATAAAAACGGTGAAGGACCTTATGTTGGCTCCTCTGATGGAAGAATTTTCAAATATGTTGGCCCAAATAAAGGTTTCTTCAAGGAATATGCTTACACTTCTCCAAACAGGTAACTAATATTTCACCAATATTAGCCAGTTCTCCTTTCAAAAAAAAAATGTATTAGCTAGTTTGTTTGTAAAAAAAAAACTATTAATTAGTTAACTAGATTCAAAGCCTAATGAGTTAAGTGACCATTTATTTTGTAAAAGTACTATTTTCAATTTTAAATACAAGCATATCATCTTGTTTTTAATTTGTTTCCCTTTTCTTTTTACTTTTTTATATTTTCCTTTTTACCACTAAAGCTAAGACCTCACGAACTATATAGAAAACACTGGATTTTTTTTTTCCTTCTTATTTTTTGTGTGAATCAACAACGTGAGAATTTTATAAATGAAAGTAAAAGCAGAAAATGGAAATCAGAAATTACTTCTATTTTTTATCAGGAACAAGACAGTCTGTGATGGCATTGATGACTTCTCAGCACTCCAACCAACATGTGGGAGGCCATTAGGATTGAGTTTCAATCATCAAACAAACGACTTGTATATAGCTGATGCTTATTATGGACTACTTATGGTTGGTCCCAATGGAGGGAAAGCAACCCAATTAGTTGGACCTGCACAAGTCAATTCTACTGTGTTTGCTGATGGTTTGGATATAGACCCAAACACTGGAATCATTTATTTTACAATAGCTAGCGCTAAATTCCAGCTCAAGTAAGCATAGTTTGTCTACTTACAATGTTGTCTTTTGCACCTAAATGCCAATTCAGCATTACAGTAACAAATGTTCACATCACTTGATTTTTTGTAGGGATTTTCTCAAACTGGTAGACAGTGGAGATCATTCAGGAAGCCTATTGAGATATGATCCTAGCACCAACCAAACAACAGTGTTGCTAAGCAATCTTGCAGTGCCAACTGGTGTGGCAGTCAGTAGAGATGGCTCATTCGCACTTGTTAACGAATTTCTATCCTTCAAAGTTCGGAAAGTGTGGCTGAAAGGACCAAGAGCAAATTCATCAGAATTATTCATGCTGCTTGCTGGAAGACCAAATAACATTAAGAGGAACTCAAGGGGCCAATTTTGGATTTCAGTGAATAGTTTTTTAGGACGGCCAGGATCTCCAAGACGTACGAATTTGCCTATAGGAGTCAGAGTGACTGAGAATCGTTTAATTTTACAGATTGTATCTCTTCCTGCTGAGTATGGTACTCAACTAAGTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGGTGGTTCCCTGCTTGCTTCTTATGCTAGCATCTTTTCCCCCTAA
Protein sequence

>MS.gene033026.t1

MLNMAMVVTATTLVILLLCSPSSVAILLNKLQLPPPVTGPESLAFDKNGEGPYVGSSDGRIFKYVGPNKGFFKEYAYTSPNRNKTVCDGIDDFSALQPTCGRPLGLSFNHQTNDLYIADAYYGLLMVGPNGGKATQLVGPAQVNSTVFADGLDIDPNTGIIYFTIASAKFQLKDFLKLVDSGDHSGSLLRYDPSTNQTTVLLSNLAVPTGVAVSRDGSFALVNEFLSFKVRKVWLKGPRANSSELFMLLAGRPNNIKRNSRGQFWISVNSFLGRPGSPRRTNLPIGVRVTENRLILQIVSLPAEYGTQLSSEVQEYNGTLYGGSLLASYASIFSP