AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038810.t1 MTR_4g112670 80.597 335 62 2 1 333 1 334 0.0 545
MS.gene038810.t1 MTR_4g112650 73.731 335 85 2 2 334 1 334 0.0 511
MS.gene038810.t1 MTR_4g112630 71.810 337 81 3 2 335 1 326 1.08e-172 482
MS.gene038810.t1 MTR_4g112620 69.822 338 60 5 1 334 1 300 5.17e-163 457
MS.gene038810.t1 MTR_2g058450 52.922 308 143 2 27 333 28 334 2.33e-106 314
MS.gene038810.t1 MTR_0003s0530 77.901 181 38 1 147 325 1 181 8.98e-97 285
MS.gene038810.t1 MTR_7g490330 40.000 330 173 5 11 334 14 324 5.62e-72 226
MS.gene038810.t1 MTR_7g490350 38.006 321 169 4 39 334 53 368 2.21e-71 226
MS.gene038810.t1 MTR_2g058410 50.862 232 113 1 104 334 1 232 2.24e-68 214
MS.gene038810.t1 MTR_5g091980 37.901 343 182 5 2 334 1 322 2.42e-68 217
MS.gene038810.t1 MTR_7g090300 38.272 324 166 7 38 334 52 368 1.99e-66 213
MS.gene038810.t1 MTR_2g087780 36.765 340 177 8 26 333 60 393 5.93e-64 207
MS.gene038810.t1 MTR_7g090320 35.522 335 181 7 29 329 48 381 8.10e-64 207
MS.gene038810.t1 MTR_4g050190 36.778 329 171 7 37 334 68 390 6.10e-63 205
MS.gene038810.t1 MTR_2g099030 36.826 334 181 5 27 331 70 402 3.53e-62 203
MS.gene038810.t1 MTR_4g112840 93.069 101 7 0 174 274 56 156 8.42e-61 192
MS.gene038810.t1 MTR_7g090310 35.312 320 173 6 39 325 58 376 1.39e-59 196
MS.gene038810.t1 MTR_5g077620 73.864 88 20 3 4 91 1 85 4.16e-34 122
MS.gene038810.t1 MTR_5g077620 74.419 43 11 0 279 321 76 118 1.22e-12 65.1
MS.gene038810.t1 MTR_8g074170 34.783 230 125 5 39 268 78 282 6.21e-29 115
MS.gene038810.t1 MTR_8g074270 33.913 230 127 5 39 268 78 282 7.66e-28 112
MS.gene038810.t1 MTR_8g074210 32.906 234 128 7 37 268 76 282 8.91e-28 112
MS.gene038810.t1 MTR_2g042430 33.476 233 121 9 40 268 77 279 2.23e-23 99.8
MS.gene038810.t1 MTR_2g042370 33.476 233 122 9 40 268 65 268 8.42e-23 97.8
MS.gene038810.t1 MTR_2g042420 33.047 233 122 9 40 268 58 260 2.18e-22 96.7
MS.gene038810.t1 MTR_2g058430 45.378 119 44 2 77 183 43 152 1.87e-20 89.7
MS.gene038810.t1 MTR_1g075865 39.252 107 64 1 151 256 4 110 4.01e-17 77.0
MS.gene038810.t1 MTR_5g093640 45.918 98 7 2 238 335 52 103 2.11e-15 71.6
MS.gene038810.t1 MTR_8g074320 35.433 127 77 3 101 224 95 219 7.39e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038810.t1 AT3G57030 40.373 322 162 5 38 333 55 372 3.67e-73 231
MS.gene038810.t1 AT1G74010 42.345 307 165 7 28 332 26 322 3.27e-71 224
MS.gene038810.t1 AT1G74020 41.424 309 168 7 28 333 27 325 1.47e-70 223
MS.gene038810.t1 AT1G74000 40.453 309 171 7 28 333 29 327 3.53e-69 219
MS.gene038810.t1 AT1G08470 37.920 327 169 6 37 334 67 388 1.54e-66 214
MS.gene038810.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene038810.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene038810.t1 AT5G22020 38.110 328 165 8 37 333 73 393 1.07e-64 210
MS.gene038810.t1 AT3G57010 37.818 275 152 5 8 270 11 278 9.72e-64 207
MS.gene038810.t1 AT2G41290 38.906 329 162 11 39 333 51 374 2.10e-62 203
MS.gene038810.t1 AT3G57020 40.816 245 135 4 33 274 47 284 3.23e-61 200
MS.gene038810.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene038810.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene038810.t1 AT3G59530 37.329 292 176 4 30 317 75 363 5.19e-58 192
MS.gene038810.t1 AT2G41300 32.919 322 177 4 34 326 73 384 1.29e-55 186
MS.gene038810.t1 AT3G57020 38.367 245 127 3 33 274 47 270 6.44e-55 183
MS.gene038810.t1 AT3G51420 26.316 304 181 9 17 311 40 309 5.49e-21 92.8
MS.gene038810.t1 AT3G51440 29.487 234 137 6 40 270 70 278 6.29e-20 89.7
MS.gene038810.t1 AT3G51430 27.306 271 163 8 40 309 70 307 3.22e-19 87.8
MS.gene038810.t1 AT3G51430 28.448 232 142 6 40 270 70 278 7.17e-19 87.0
MS.gene038810.t1 AT3G51450 28.511 235 138 7 40 270 70 278 1.04e-17 83.6

Find 79 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTGAAGAAACCTTTATT+TGG 0.157597 8.3:-14786361 None:intergenic
GGAACTCAAGGGGCCAATTT+TGG 0.185598 8.3:+14787411 MS.gene038810:CDS
TATATAGCTGATGCTTATTA+TGG 0.208516 8.3:+14786887 MS.gene038810:CDS
GAGTTCCTCTTAATGTTATT+TGG 0.230197 8.3:-14787395 None:intergenic
ATTAGCAATCATGTTGAATA+TGG 0.257587 8.3:+14786153 None:intergenic
CTTGTGCAGGTCCAACTAAT+TGG 0.262161 8.3:-14786946 None:intergenic
AAATATGTTGGCCCAAATAA+AGG 0.281891 8.3:+14786349 MS.gene038810:CDS
TACTGTGTTTGCTGATGGTT+TGG 0.288431 8.3:+14786976 MS.gene038810:CDS
AAATAAATGATTCCAGTGTT+TGG 0.305353 8.3:-14787007 None:intergenic
TATTCACTGAAATCCAAAAT+TGG 0.308405 8.3:-14787424 None:intergenic
TGCTTATTATGGACTACTTA+TGG 0.309237 8.3:+14786898 MS.gene038810:CDS
TTGGGTTGCTTTCCCTCCAT+TGG 0.330957 8.3:-14786927 None:intergenic
GAATTATTCATGCTGCTTGC+TGG 0.332845 8.3:+14787368 MS.gene038810:CDS
CCACACTTTCCGAACTTTGA+AGG 0.347530 8.3:-14787318 None:intergenic
CCAACATGTGGGAGGCCATT+AGG 0.355169 8.3:+14786833 MS.gene038810:CDS
AATAAATGATTCCAGTGTTT+GGG 0.362007 8.3:-14787006 None:intergenic
CCTTGAAGAAACCTTTATTT+GGG 0.367638 8.3:-14786360 None:intergenic
TGAAATATTAGTTACCTGTT+TGG 0.368413 8.3:-14786400 None:intergenic
GTATCTCTTCCTGCTGAGTA+TGG 0.370089 8.3:+14787533 MS.gene038810:CDS
AATTTCTATCCTTCAAAGTT+CGG 0.390884 8.3:+14787309 MS.gene038810:CDS
CCCAAATAAAGGTTTCTTCA+AGG 0.401202 8.3:+14786360 MS.gene038810:CDS
TGGGTTGCTTTCCCTCCATT+GGG 0.406224 8.3:-14786926 None:intergenic
AATTCTGATGAATTTGCTCT+TGG 0.423029 8.3:-14787350 None:intergenic
GAAGACCAAATAACATTAAG+AGG 0.431967 8.3:+14787390 MS.gene038810:CDS
GAGTACAATGGAACACTCTA+TGG 0.432828 8.3:+14787581 MS.gene038810:CDS
AGCAATCTTGCAGTGCCAAC+TGG 0.441501 8.3:+14787245 MS.gene038810:CDS
TCAGTCACTCTGACTCCTAT+AGG 0.446798 8.3:-14787488 None:intergenic
TGCTTAGCAACACTGTTGTT+TGG 0.449793 8.3:-14787226 None:intergenic
TTCGTACGTCTTGGAGATCC+TGG 0.460847 8.3:-14787461 None:intergenic
CTACTTATGGTTGGTCCCAA+TGG 0.466876 8.3:+14786911 MS.gene038810:CDS
TGCTAGGATCATATCTCAAT+AGG 0.467290 8.3:-14787199 None:intergenic
TTGTGCAGGTCCAACTAATT+GGG 0.468485 8.3:-14786945 None:intergenic
ATGCTTACACTTCTCCAAAC+AGG 0.470208 8.3:+14786386 MS.gene038810:CDS
GTAGACAGTGGAGATCATTC+AGG 0.470599 8.3:+14787173 MS.gene038810:CDS
CCTTATGTTGGCTCCTCTGA+TGG 0.473712 8.3:+14786316 MS.gene038810:CDS
AATTCTACTGTGTTTGCTGA+TGG 0.478552 8.3:+14786971 MS.gene038810:CDS
TATTATGGACTACTTATGGT+TGG 0.479374 8.3:+14786902 MS.gene038810:CDS
AGACGTACGAATTTGCCTAT+AGG 0.484988 8.3:+14787473 MS.gene038810:CDS
TGATTGAAACTCAATCCTAA+TGG 0.492488 8.3:-14786848 None:intergenic
CAAACTATGCTTACTTGAGC+TGG 0.495674 8.3:-14787051 None:intergenic
TCAGGTCCTGTCACTGGTGG+TGG 0.498527 8.3:-14786262 None:intergenic
GGGAAAGCAACCCAATTAGT+TGG 0.500291 8.3:+14786935 MS.gene038810:CDS
TAGCAACACTGTTGTTTGGT+TGG 0.501427 8.3:-14787222 None:intergenic
TGCTAGCATAAGAAGCAAGC+AGG 0.502038 8.3:-14787610 None:intergenic
AGTAATATAGCTACTGATGA+TGG 0.504220 8.3:-14786223 None:intergenic
AGTGACTCAGGTCCTGTCAC+TGG 0.505698 8.3:-14786268 None:intergenic
ACTGTTGTTTGGTTGGTGCT+AGG 0.506451 8.3:-14787215 None:intergenic
CCATCAGAGGAGCCAACATA+AGG 0.508307 8.3:-14786316 None:intergenic
ATAGGCAAATTCGTACGTCT+TGG 0.509028 8.3:-14787470 None:intergenic
ATGGCCTCCCACATGTTGGT+TGG 0.525902 8.3:-14786829 None:intergenic
TTATCGAATGCAAGTGACTC+AGG 0.528312 8.3:-14786280 None:intergenic
ACAGTAGAATTGACTTGTGC+AGG 0.530441 8.3:-14786959 None:intergenic
ATAACATTAAGAGGAACTCA+AGG 0.531400 8.3:+14787399 MS.gene038810:CDS
TTTGAAAATTCTTCCATCAG+AGG 0.540669 8.3:-14786329 None:intergenic
GTTCGGAAAGTGTGGCTGAA+AGG 0.546561 8.3:+14787326 MS.gene038810:CDS
CAGCTACCACCACCAGTGAC+AGG 0.551193 8.3:+14786256 MS.gene038810:CDS
CTACTGACTGCCACACCAGT+TGG 0.554129 8.3:-14787260 None:intergenic
GACTCAGGTCCTGTCACTGG+TGG 0.566671 8.3:-14786265 None:intergenic
CTTATGGTTGGTCCCAATGG+AGG 0.566947 8.3:+14786914 MS.gene038810:CDS
AACGGTGAAGGACCTTATGT+TGG 0.580918 8.3:+14786304 MS.gene038810:CDS
CCTTCAAAGTTCGGAAAGTG+TGG 0.581970 8.3:+14787318 MS.gene038810:CDS
TCAGCACTCCAACCAACATG+TGG 0.583888 8.3:+14786821 MS.gene038810:CDS
CCTAATGGCCTCCCACATGT+TGG 0.588145 8.3:-14786833 None:intergenic
GGTGTGGCAGTCAGTAGAGA+TGG 0.589991 8.3:+14787266 MS.gene038810:CDS
TTATGGTTGGTCCCAATGGA+GGG 0.592491 8.3:+14786915 MS.gene038810:CDS
GCTAGCATAAGAAGCAAGCA+GGG 0.596924 8.3:-14787609 None:intergenic
AGTTGAGTACCATACTCAGC+AGG 0.600382 8.3:-14787542 None:intergenic
TAACATTAAGAGGAACTCAA+GGG 0.618426 8.3:+14787400 MS.gene038810:CDS
TTGGATATAGACCCAAACAC+TGG 0.627976 8.3:+14786995 MS.gene038810:CDS
TTTCTCAAACTGGTAGACAG+TGG 0.638164 8.3:+14787161 MS.gene038810:CDS
AGGAACAAGACAGTCTGTGA+TGG 0.642304 8.3:+14786785 MS.gene038810:intron
AATCATGTTGAATATGGCAA+TGG 0.644300 8.3:+14786159 None:intergenic
AGTGAGGTTCAAGAGTACAA+TGG 0.650500 8.3:+14787569 MS.gene038810:CDS
AACATTAAGAGGAACTCAAG+GGG 0.655990 8.3:+14787401 MS.gene038810:CDS
CACTCCAACCAACATGTGGG+AGG 0.658905 8.3:+14786825 MS.gene038810:CDS
TCTTGCAGTGCCAACTGGTG+TGG 0.670889 8.3:+14787250 MS.gene038810:CDS
TGGTACTCAACTAAGTAGTG+AGG 0.675669 8.3:+14787553 MS.gene038810:CDS
TACAATGGAACACTCTATGG+TGG 0.677070 8.3:+14787584 MS.gene038810:CDS
CAGCACTCCAACCAACATGT+GGG 0.683867 8.3:+14786822 MS.gene038810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAGTAAAAAGAAAA+GGG - chr8.3:14786604-14786623 None:intergenic 10.0%
!! TATAAAAAAGTAAAAAGAAA+AGG - chr8.3:14786605-14786624 None:intergenic 10.0%
!!! TAATACATTTTTTTTTTGAA+AGG - chr8.3:14786444-14786463 None:intergenic 10.0%
!!! AATTACTTCTATTTTTTATC+AGG + chr8.3:14786765-14786784 MS.gene038810:intron 15.0%
!!! TAGTACTTTTACAAAATAAA+TGG - chr8.3:14786535-14786554 None:intergenic 15.0%
!!! ATTTCAGTGAATAGTTTTTT+AGG + chr8.3:14787434-14787453 MS.gene038810:CDS 20.0%
! AAATAAATGATTCCAGTGTT+TGG - chr8.3:14787010-14787029 None:intergenic 25.0%
! AATAAATGATTCCAGTGTTT+GGG - chr8.3:14787009-14787028 None:intergenic 25.0%
! AATTTCTATCCTTCAAAGTT+CGG + chr8.3:14787309-14787328 MS.gene038810:CDS 25.0%
! ATGAAAGTAAAAGCAGAAAA+TGG + chr8.3:14786734-14786753 MS.gene038810:intron 25.0%
! GATTCACACAAAAAATAAGA+AGG - chr8.3:14786693-14786712 None:intergenic 25.0%
! TATATAGCTGATGCTTATTA+TGG + chr8.3:14786887-14786906 MS.gene038810:CDS 25.0%
! TATTCACTGAAATCCAAAAT+TGG - chr8.3:14787427-14787446 None:intergenic 25.0%
! TGAAATATTAGTTACCTGTT+TGG - chr8.3:14786403-14786422 None:intergenic 25.0%
!! GGAAGAATTTTCAAATATGT+TGG + chr8.3:14786337-14786356 MS.gene038810:CDS 25.0%
!!! ACATCACTTGATTTTTTGTA+GGG + chr8.3:14787136-14787155 MS.gene038810:intron 25.0%
!!! TTTTTTTTTGAAAGGAGAAC+TGG - chr8.3:14786436-14786455 None:intergenic 25.0%
AAATATGTTGGCCCAAATAA+AGG + chr8.3:14786349-14786368 MS.gene038810:CDS 30.0%
AAATGGTCACTTAACTCATT+AGG - chr8.3:14786518-14786537 None:intergenic 30.0%
ACGAACTATATAGAAAACAC+TGG + chr8.3:14786656-14786675 MS.gene038810:intron 30.0%
AGTAATATAGCTACTGATGA+TGG - chr8.3:14786226-14786245 None:intergenic 30.0%
ATAACATTAAGAGGAACTCA+AGG + chr8.3:14787399-14787418 MS.gene038810:CDS 30.0%
GAAGACCAAATAACATTAAG+AGG + chr8.3:14787390-14787409 MS.gene038810:CDS 30.0%
GAGTTCCTCTTAATGTTATT+TGG - chr8.3:14787398-14787417 None:intergenic 30.0%
TAACATTAAGAGGAACTCAA+GGG + chr8.3:14787400-14787419 MS.gene038810:CDS 30.0%
TCACTTGCATTCGATAAAAA+CGG + chr8.3:14786286-14786305 MS.gene038810:CDS 30.0%
TCCTTGAAGAAACCTTTATT+TGG - chr8.3:14786364-14786383 None:intergenic 30.0%
TGATTGAAACTCAATCCTAA+TGG - chr8.3:14786851-14786870 None:intergenic 30.0%
TTGTTACTGTAATGCTGAAT+TGG - chr8.3:14787110-14787129 None:intergenic 30.0%
TTTGAAAATTCTTCCATCAG+AGG - chr8.3:14786332-14786351 None:intergenic 30.0%
! AATTCTGATGAATTTGCTCT+TGG - chr8.3:14787353-14787372 None:intergenic 30.0%
! CCTTGAAGAAACCTTTATTT+GGG - chr8.3:14786363-14786382 None:intergenic 30.0%
! TATTATGGACTACTTATGGT+TGG + chr8.3:14786902-14786921 MS.gene038810:CDS 30.0%
! TGCTTATTATGGACTACTTA+TGG + chr8.3:14786898-14786917 MS.gene038810:CDS 30.0%
! TGTTTTCTATATAGTTCGTG+AGG - chr8.3:14786655-14786674 None:intergenic 30.0%
!! TCTTAGCTTTAGTGGTAAAA+AGG - chr8.3:14786632-14786651 None:intergenic 30.0%
!!! CACATCACTTGATTTTTTGT+AGG + chr8.3:14787135-14787154 MS.gene038810:intron 30.0%
!!! CAGTGAATAGTTTTTTAGGA+CGG + chr8.3:14787438-14787457 MS.gene038810:CDS 30.0%
AAAGGAGAACTGGCTAATAT+TGG - chr8.3:14786426-14786445 None:intergenic 35.0%
AACATTAAGAGGAACTCAAG+GGG + chr8.3:14787401-14787420 MS.gene038810:CDS 35.0%
CCCAAATAAAGGTTTCTTCA+AGG + chr8.3:14786360-14786379 MS.gene038810:CDS 35.0%
GTAATGCTGAATTGGCATTT+AGG - chr8.3:14787102-14787121 None:intergenic 35.0%
TGCTAGGATCATATCTCAAT+AGG - chr8.3:14787202-14787221 None:intergenic 35.0%
! AATTCTACTGTGTTTGCTGA+TGG + chr8.3:14786971-14786990 MS.gene038810:CDS 35.0%
! TTGTAGGGATTTTCTCAAAC+TGG + chr8.3:14787151-14787170 MS.gene038810:intron 35.0%
AGACGTACGAATTTGCCTAT+AGG + chr8.3:14787473-14787492 MS.gene038810:CDS 40.0%
ATAGGCAAATTCGTACGTCT+TGG - chr8.3:14787473-14787492 None:intergenic 40.0%
ATGCTTACACTTCTCCAAAC+AGG + chr8.3:14786386-14786405 MS.gene038810:CDS 40.0%
CAAACTATGCTTACTTGAGC+TGG - chr8.3:14787054-14787073 None:intergenic 40.0%
GAGTACAATGGAACACTCTA+TGG + chr8.3:14787581-14787600 MS.gene038810:CDS 40.0%
GCATTCGATAAAAACGGTGA+AGG + chr8.3:14786292-14786311 MS.gene038810:CDS 40.0%
TACAATGGAACACTCTATGG+TGG + chr8.3:14787584-14787603 MS.gene038810:CDS 40.0%
TGCTTAGCAACACTGTTGTT+TGG - chr8.3:14787229-14787248 None:intergenic 40.0%
TGGTACTCAACTAAGTAGTG+AGG + chr8.3:14787553-14787572 MS.gene038810:CDS 40.0%
TTATCGAATGCAAGTGACTC+AGG - chr8.3:14786283-14786302 None:intergenic 40.0%
TTGGATATAGACCCAAACAC+TGG + chr8.3:14786995-14787014 MS.gene038810:CDS 40.0%
TTGTGCAGGTCCAACTAATT+GGG - chr8.3:14786948-14786967 None:intergenic 40.0%
TTTCTCAAACTGGTAGACAG+TGG + chr8.3:14787161-14787180 MS.gene038810:CDS 40.0%
! AGTGAGGTTCAAGAGTACAA+TGG + chr8.3:14787569-14787588 MS.gene038810:CDS 40.0%
! GAATTATTCATGCTGCTTGC+TGG + chr8.3:14787368-14787387 MS.gene038810:CDS 40.0%
! TACTGTGTTTGCTGATGGTT+TGG + chr8.3:14786976-14786995 MS.gene038810:CDS 40.0%
! TAGCAACACTGTTGTTTGGT+TGG - chr8.3:14787225-14787244 None:intergenic 40.0%
!! ACAGTAGAATTGACTTGTGC+AGG - chr8.3:14786962-14786981 None:intergenic 40.0%
!!! AATAGTTTTTTAGGACGGCC+AGG + chr8.3:14787443-14787462 MS.gene038810:CDS 40.0%
AACGGTGAAGGACCTTATGT+TGG + chr8.3:14786304-14786323 MS.gene038810:CDS 45.0%
AGGAACAAGACAGTCTGTGA+TGG + chr8.3:14786785-14786804 MS.gene038810:intron 45.0%
AGTTGAGTACCATACTCAGC+AGG - chr8.3:14787545-14787564 None:intergenic 45.0%
CCACACTTTCCGAACTTTGA+AGG - chr8.3:14787321-14787340 None:intergenic 45.0%
CCTTCAAAGTTCGGAAAGTG+TGG + chr8.3:14787318-14787337 MS.gene038810:CDS 45.0%
CTTGTGCAGGTCCAACTAAT+TGG - chr8.3:14786949-14786968 None:intergenic 45.0%
GCTAGCATAAGAAGCAAGCA+GGG - chr8.3:14787612-14787631 None:intergenic 45.0%
GGGAAAGCAACCCAATTAGT+TGG + chr8.3:14786935-14786954 MS.gene038810:CDS 45.0%
GTAGACAGTGGAGATCATTC+AGG + chr8.3:14787173-14787192 MS.gene038810:CDS 45.0%
GTATCTCTTCCTGCTGAGTA+TGG + chr8.3:14787533-14787552 MS.gene038810:CDS 45.0%
TCAGTCACTCTGACTCCTAT+AGG - chr8.3:14787491-14787510 None:intergenic 45.0%
TGCTAGCATAAGAAGCAAGC+AGG - chr8.3:14787613-14787632 None:intergenic 45.0%
! ACTGTTGTTTGGTTGGTGCT+AGG - chr8.3:14787218-14787237 None:intergenic 45.0%
! CTACTTATGGTTGGTCCCAA+TGG + chr8.3:14786911-14786930 MS.gene038810:CDS 45.0%
! TTATGGTTGGTCCCAATGGA+GGG + chr8.3:14786915-14786934 MS.gene038810:CDS 45.0%
!! TCGTGAGGTCTTAGCTTTAG+TGG - chr8.3:14786640-14786659 None:intergenic 45.0%
AGCAATCTTGCAGTGCCAAC+TGG + chr8.3:14787245-14787264 MS.gene038810:CDS 50.0%
CAGCACTCCAACCAACATGT+GGG + chr8.3:14786822-14786841 MS.gene038810:CDS 50.0%
CCATCAGAGGAGCCAACATA+AGG - chr8.3:14786319-14786338 None:intergenic 50.0%
TCAGCACTCCAACCAACATG+TGG + chr8.3:14786821-14786840 MS.gene038810:CDS 50.0%
TTCGTACGTCTTGGAGATCC+TGG - chr8.3:14787464-14787483 None:intergenic 50.0%
! CTTATGGTTGGTCCCAATGG+AGG + chr8.3:14786914-14786933 MS.gene038810:CDS 50.0%
! GGAACTCAAGGGGCCAATTT+TGG + chr8.3:14787411-14787430 MS.gene038810:CDS 50.0%
! GTTCGGAAAGTGTGGCTGAA+AGG + chr8.3:14787326-14787345 MS.gene038810:CDS 50.0%
! TGGGTTGCTTTCCCTCCATT+GGG - chr8.3:14786929-14786948 None:intergenic 50.0%
! TTGGGTTGCTTTCCCTCCAT+TGG - chr8.3:14786930-14786949 None:intergenic 50.0%
!! CCTTATGTTGGCTCCTCTGA+TGG + chr8.3:14786316-14786335 MS.gene038810:CDS 50.0%
AGTGACTCAGGTCCTGTCAC+TGG - chr8.3:14786271-14786290 None:intergenic 55.0%
ATGGCCTCCCACATGTTGGT+TGG - chr8.3:14786832-14786851 None:intergenic 55.0%
CACTCCAACCAACATGTGGG+AGG + chr8.3:14786825-14786844 MS.gene038810:CDS 55.0%
CCAACATGTGGGAGGCCATT+AGG + chr8.3:14786833-14786852 MS.gene038810:CDS 55.0%
CCTAATGGCCTCCCACATGT+TGG - chr8.3:14786836-14786855 None:intergenic 55.0%
GGTGTGGCAGTCAGTAGAGA+TGG + chr8.3:14787266-14787285 MS.gene038810:CDS 55.0%
TCTTGCAGTGCCAACTGGTG+TGG + chr8.3:14787250-14787269 MS.gene038810:CDS 55.0%
! CTACTGACTGCCACACCAGT+TGG - chr8.3:14787263-14787282 None:intergenic 55.0%
CAGCTACCACCACCAGTGAC+AGG + chr8.3:14786256-14786275 MS.gene038810:CDS 60.0%
GACTCAGGTCCTGTCACTGG+TGG - chr8.3:14786268-14786287 None:intergenic 60.0%
TCAGGTCCTGTCACTGGTGG+TGG - chr8.3:14786265-14786284 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 14786163 14787646 14786163 ID=MS.gene038810
chr8.3 mRNA 14786163 14787646 14786163 ID=MS.gene038810.t1;Parent=MS.gene038810
chr8.3 exon 14786163 14786407 14786163 ID=MS.gene038810.t1.exon1;Parent=MS.gene038810.t1
chr8.3 CDS 14786163 14786407 14786163 ID=cds.MS.gene038810.t1;Parent=MS.gene038810.t1
chr8.3 exon 14786787 14787059 14786787 ID=MS.gene038810.t1.exon2;Parent=MS.gene038810.t1
chr8.3 CDS 14786787 14787059 14786787 ID=cds.MS.gene038810.t1;Parent=MS.gene038810.t1
chr8.3 exon 14787157 14787646 14787157 ID=MS.gene038810.t1.exon3;Parent=MS.gene038810.t1
chr8.3 CDS 14787157 14787646 14787157 ID=cds.MS.gene038810.t1;Parent=MS.gene038810.t1
Gene Sequence

>MS.gene038810

ATGTTGAATATGGCAATGGTTGTGACTGCAACTACTCTTGTTATCTTACTGTTGTGTTCTCCATCATCAGTAGCTATATTACTGAACAAGCTTCAGCTACCACCACCAGTGACAGGACCTGAGTCACTTGCATTCGATAAAAACGGTGAAGGACCTTATGTTGGCTCCTCTGATGGAAGAATTTTCAAATATGTTGGCCCAAATAAAGGTTTCTTCAAGGAATATGCTTACACTTCTCCAAACAGGTAACTAATATTTCACCAATATTAGCCAGTTCTCCTTTCAAAAAAAAAATGTATTAGCTAGTTTGTTTGTAAAAAAAAAACTATTAATTAGTTAACTAGATTCAAAGCCTAATGAGTTAAGTGACCATTTATTTTGTAAAAGTACTATTTTCAATTTTAAATACAAGCATATCATCTTGTTTTTAATTTGTTTCCCTTTTCTTTTTACTTTTTTATATTTTCCTTTTTACCACTAAAGCTAAGACCTCACGAACTATATAGAAAACACTGGATTTTTTTTTTCCTTCTTATTTTTTGTGTGAATCAACAACGTGAGAATTTTATAAATGAAAGTAAAAGCAGAAAATGGAAATCAGAAATTACTTCTATTTTTTATCAGGAACAAGACAGTCTGTGATGGCATTGATGACTTCTCAGCACTCCAACCAACATGTGGGAGGCCATTAGGATTGAGTTTCAATCATCAAACAAACGACTTGTATATAGCTGATGCTTATTATGGACTACTTATGGTTGGTCCCAATGGAGGGAAAGCAACCCAATTAGTTGGACCTGCACAAGTCAATTCTACTGTGTTTGCTGATGGTTTGGATATAGACCCAAACACTGGAATCATTTATTTTACAATAGCTAGCGCTAAATTCCAGCTCAAGTAAGCATAGTTTGTCTACTTACAATGTTGTCTTTTGCACCTAAATGCCAATTCAGCATTACAGTAACAAATGTTCACATCACTTGATTTTTTGTAGGGATTTTCTCAAACTGGTAGACAGTGGAGATCATTCAGGAAGCCTATTGAGATATGATCCTAGCACCAACCAAACAACAGTGTTGCTAAGCAATCTTGCAGTGCCAACTGGTGTGGCAGTCAGTAGAGATGGCTCATTCGCACTTGTTAACGAATTTCTATCCTTCAAAGTTCGGAAAGTGTGGCTGAAAGGACCAAGAGCAAATTCATCAGAATTATTCATGCTGCTTGCTGGAAGACCAAATAACATTAAGAGGAACTCAAGGGGCCAATTTTGGATTTCAGTGAATAGTTTTTTAGGACGGCCAGGATCTCCAAGACGTACGAATTTGCCTATAGGAGTCAGAGTGACTGAGAATCGTTTAATTTTACAGATTGTATCTCTTCCTGCTGAGTATGGTACTCAACTAAGTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGGTGGTTCCCTGCTTGCTTCTTATGCTAGCATCTTTTCCCCCTAA
Protein sequence

>MS.gene038810.t1

MLNMAMVVTATTLVILLLCSPSSVAILLNKLQLPPPVTGPESLAFDKNGEGPYVGSSDGRIFKYVGPNKGFFKEYAYTSPNRNKTVCDGIDDFSALQPTCGRPLGLSFNHQTNDLYIADAYYGLLMVGPNGGKATQLVGPAQVNSTVFADGLDIDPNTGIIYFTIASAKFQLKDFLKLVDSGDHSGSLLRYDPSTNQTTVLLSNLAVPTGVAVSRDGSFALVNEFLSFKVRKVWLKGPRANSSELFMLLAGRPNNIKRNSRGQFWISVNSFLGRPGSPRRTNLPIGVRVTENRLILQIVSLPAEYGTQLSSEVQEYNGTLYGGSLLASYASIFSP