Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051922.t1 | GAU17571.1 | 48.8 | 365 | 56 | 4 | 3 | 236 | 4 | 368 | 1.10E-62 | 250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051922.t1 | A0A392MC01 | 47.9 | 315 | 70 | 5 | 8 | 236 | 15 | 321 | 9.4e-64 | 253.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030034 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene017083 | PPI |
| MS.gene030029 | MS.gene051922 | PPI |
| MS.gene038330 | MS.gene051922 | PPI |
| MS.gene017102 | MS.gene051922 | PPI |
| MS.gene017101 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene057065 | PPI |
| MS.gene030042 | MS.gene051922 | PPI |
| MS.gene038342 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene017115 | PPI |
| MS.gene051922 | MS.gene038324 | PPI |
| MS.gene038300 | MS.gene051922 | PPI |
| MS.gene057066 | MS.gene051922 | PPI |
| MS.gene030037 | MS.gene051922 | PPI |
| MS.gene030033 | MS.gene051922 | PPI |
| MS.gene038326 | MS.gene051922 | PPI |
| MS.gene057069 | MS.gene051922 | PPI |
| MS.gene038328 | MS.gene051922 | PPI |
| MS.gene057090 | MS.gene051922 | PPI |
| MS.gene038336 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene038327 | PPI |
| MS.gene051922 | MS.gene057070 | PPI |
| MS.gene051922 | MS.gene030045 | PPI |
| MS.gene017099 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene017100 | PPI |
| MS.gene038323 | MS.gene051922 | PPI |
| MS.gene038333 | MS.gene051922 | PPI |
| MS.gene051922 | MS.gene030026 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051922.t1 | MTR_7g107170 | 70.552 | 163 | 42 | 1 | 80 | 236 | 107 | 269 | 8.38e-78 | 235 |
| MS.gene051922.t1 | MTR_7g107170 | 58.621 | 87 | 36 | 0 | 135 | 221 | 1 | 87 | 5.25e-27 | 105 |
| MS.gene051922.t1 | MTR_7g107200 | 54.762 | 210 | 76 | 4 | 40 | 232 | 169 | 376 | 1.64e-65 | 207 |
| MS.gene051922.t1 | MTR_1g042160 | 52.083 | 192 | 57 | 1 | 39 | 230 | 152 | 308 | 3.03e-61 | 194 |
| MS.gene051922.t1 | MTR_7g107160 | 59.690 | 129 | 49 | 2 | 105 | 230 | 315 | 443 | 8.97e-42 | 147 |
| MS.gene051922.t1 | MTR_8g011730 | 41.290 | 155 | 71 | 3 | 81 | 233 | 219 | 355 | 5.55e-28 | 109 |
| MS.gene051922.t1 | MTR_2g034780 | 36.413 | 184 | 104 | 5 | 51 | 225 | 82 | 261 | 1.07e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGATTTAGATTCTGAATT+AGG | 0.193931 | 7.1:+5996807 | MS.gene051922:CDS |
| ACCCTCAATTGAAGTGCTTA+TGG | 0.241179 | 7.1:+5996386 | MS.gene051922:CDS |
| TTGGGACTTCCCCTTTAATA+TGG | 0.265959 | 7.1:-5996260 | None:intergenic |
| TTGAAATAGTTTCCAGATTT+GGG | 0.266501 | 7.1:-5996305 | None:intergenic |
| GTTGAAATAGTTTCCAGATT+TGG | 0.273996 | 7.1:-5996306 | None:intergenic |
| CCCCATGTTCAATTTGCTTT+AGG | 0.275944 | 7.1:+5996624 | MS.gene051922:CDS |
| GGGCCTTGAACTCCAGGATT+TGG | 0.290827 | 7.1:-5996285 | None:intergenic |
| GGCTGCTGCTGAGGTAAATA+TGG | 0.309872 | 7.1:+5996743 | MS.gene051922:CDS |
| AGAGAAGCTAAAGGCAAAAT+TGG | 0.311627 | 7.1:+5996722 | MS.gene051922:CDS |
| GAACTCCAGGATTTGGCCTT+GGG | 0.314486 | 7.1:-5996278 | None:intergenic |
| TCTGTATCAGTATGTTTAAT+AGG | 0.321275 | 7.1:-5996354 | None:intergenic |
| TGAACTCCAGGATTTGGCCT+TGG | 0.329525 | 7.1:-5996279 | None:intergenic |
| GATCTGGCTTTCTCCGCATT+GGG | 0.349102 | 7.1:+5996480 | MS.gene051922:CDS |
| AGTCCAACAAGCCATATTAA+AGG | 0.349672 | 7.1:+5996249 | MS.gene051922:intron |
| ATTTCTCAACATTGGATTGT+TGG | 0.361734 | 7.1:-5995413 | None:intergenic |
| CTGAATTAGGATGTGGGAGT+TGG | 0.368812 | 7.1:+5996820 | MS.gene051922:CDS |
| TGGAGTTCAAGGCCCAAATC+TGG | 0.378140 | 7.1:+5996293 | MS.gene051922:CDS |
| GTCCAACAAGCCATATTAAA+GGG | 0.378676 | 7.1:+5996250 | MS.gene051922:intron |
| AATTTAGATTTGATCTTACT+TGG | 0.378814 | 7.1:+5996595 | MS.gene051922:CDS |
| TCCCCTTTAATATGGCTTGT+TGG | 0.381394 | 7.1:-5996252 | None:intergenic |
| ATCAGTATGTTTAATAGGTT+CGG | 0.394828 | 7.1:-5996349 | None:intergenic |
| CGATCTGGCTTTCTCCGCAT+TGG | 0.395706 | 7.1:+5996479 | MS.gene051922:CDS |
| AGATTTGGGCCTTGAACTCC+AGG | 0.410070 | 7.1:-5996291 | None:intergenic |
| GAACTACAGGAAGTAAGATT+TGG | 0.411260 | 7.1:+5996423 | MS.gene051922:CDS |
| AAAGACTTGTTGAAAGCAAA+AGG | 0.417159 | 7.1:+5996774 | MS.gene051922:CDS |
| GGATAGCCGCCTGCAACAAA+AGG | 0.446112 | 7.1:-5995492 | None:intergenic |
| TGAATTAGGATGTGGGAGTT+GGG | 0.447146 | 7.1:+5996821 | MS.gene051922:CDS |
| AGGCCAAATCCTGGAGTTCA+AGG | 0.455231 | 7.1:+5996282 | MS.gene051922:CDS |
| CCATGTAAATTTCTCAACAT+TGG | 0.459723 | 7.1:-5995421 | None:intergenic |
| ATGTGGGAGTTGGGAACCAT+AGG | 0.460618 | 7.1:+5996830 | MS.gene051922:CDS |
| ATCCATAAGCACTTCAATTG+AGG | 0.469428 | 7.1:-5996388 | None:intergenic |
| TTAGATTCTGAATTAGGATG+TGG | 0.474050 | 7.1:+5996813 | MS.gene051922:CDS |
| GGCAAAATTGGCTGCTGCTG+AGG | 0.485315 | 7.1:+5996734 | MS.gene051922:CDS |
| GAAGTCCCAAGGCCAAATCC+TGG | 0.490222 | 7.1:+5996273 | MS.gene051922:CDS |
| AAATTGCGACTTCTCTTTGA+CGG | 0.493658 | 7.1:-5996453 | None:intergenic |
| TTTCAGCAGTGTAGAACTAC+AGG | 0.498012 | 7.1:+5996410 | MS.gene051922:CDS |
| TCCATAAGCACTTCAATTGA+GGG | 0.498056 | 7.1:-5996387 | None:intergenic |
| AATTGCGACTTCTCTTTGAC+GGG | 0.499456 | 7.1:-5996452 | None:intergenic |
| CTTGAAGATCCTCACAAGCC+TGG | 0.504716 | 7.1:-5996551 | None:intergenic |
| TTGTTGCAGGCGGCTATCCA+TGG | 0.509193 | 7.1:+5995496 | MS.gene051922:CDS |
| TGTTGAGAAATTTACATGGA+AGG | 0.525784 | 7.1:+5995425 | MS.gene051922:CDS |
| TGAAAAGCTGAAAGAGAATG+TGG | 0.531880 | 7.1:+5996680 | MS.gene051922:CDS |
| CATGGATGACCAGGCTTGTG+AGG | 0.532003 | 7.1:+5996542 | MS.gene051922:CDS |
| CCAATGTTGAGAAATTTACA+TGG | 0.532545 | 7.1:+5995421 | MS.gene051922:CDS |
| TAGATTCTGAATTAGGATGT+GGG | 0.536728 | 7.1:+5996814 | MS.gene051922:CDS |
| TTCCTAAAGCAAATTGAACA+TGG | 0.538306 | 7.1:-5996626 | None:intergenic |
| GAATGTGGTAGCTCTTGAGC+TGG | 0.541953 | 7.1:+5996695 | MS.gene051922:CDS |
| AAATCTGGAAACTATTTCAA+CGG | 0.552571 | 7.1:+5996308 | MS.gene051922:CDS |
| TCCTAAAGCAAATTGAACAT+GGG | 0.566420 | 7.1:-5996625 | None:intergenic |
| TGTGGGAGTTGGGAACCATA+GGG | 0.576319 | 7.1:+5996831 | MS.gene051922:CDS |
| AGTGAAAGACATGGATGACC+AGG | 0.581108 | 7.1:+5996533 | MS.gene051922:CDS |
| ATATTAAAGGGGAAGTCCCA+AGG | 0.606798 | 7.1:+5996262 | MS.gene051922:CDS |
| CCTAAAGCAAATTGAACATG+GGG | 0.611944 | 7.1:-5996624 | None:intergenic |
| TTCTCGCTTGAAAACCGTCG+AGG | 0.618839 | 7.1:+5995458 | MS.gene051922:CDS |
| ATCTGGCTTTCTCCGCATTG+GGG | 0.621608 | 7.1:+5996481 | MS.gene051922:CDS |
| TCCAACAAGCCATATTAAAG+GGG | 0.626170 | 7.1:+5996251 | MS.gene051922:CDS |
| GCTGGAAACAGAGAAGCTAA+AGG | 0.633198 | 7.1:+5996713 | MS.gene051922:CDS |
| GACTAGAAAAGTGAAAGACA+TGG | 0.661873 | 7.1:+5996524 | MS.gene051922:CDS |
| AGGCTCAGAGTAAACCTCGA+CGG | 0.671429 | 7.1:-5995472 | None:intergenic |
| ATAAAGAACTCTCCCCAATG+CGG | 0.724243 | 7.1:-5996493 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATAAAGTTTATGTCA+AGG | - | chr7.1:5995949-5995968 | None:intergenic | 20.0% |
| !! | AATTTAGATTTGATCTTACT+TGG | + | chr7.1:5996595-5996614 | MS.gene051922:CDS | 20.0% |
| !! | TACGACAAGTTAAAATTTAT+TGG | + | chr7.1:5995541-5995560 | MS.gene051922:intron | 20.0% |
| !!! | TACAGATTTTAGTACTTTAT+AGG | + | chr7.1:5995917-5995936 | MS.gene051922:intron | 20.0% |
| ! | AAATCTGGAAACTATTTCAA+CGG | + | chr7.1:5996308-5996327 | MS.gene051922:CDS | 25.0% |
| ! | AGAGATTTAGATTCTGAATT+AGG | + | chr7.1:5996807-5996826 | MS.gene051922:CDS | 25.0% |
| ! | ATCAGTATGTTTAATAGGTT+CGG | - | chr7.1:5996352-5996371 | None:intergenic | 25.0% |
| ! | GAATAAAAGTAACATCTCAA+TGG | - | chr7.1:5995980-5995999 | None:intergenic | 25.0% |
| ! | TCTGTATCAGTATGTTTAAT+AGG | - | chr7.1:5996357-5996376 | None:intergenic | 25.0% |
| ! | TTCATTCAAATATCATACCA+TGG | - | chr7.1:5995516-5995535 | None:intergenic | 25.0% |
| ! | TTGAAATAGTTTCCAGATTT+GGG | - | chr7.1:5996308-5996327 | None:intergenic | 25.0% |
| ! | TTGTAAACTTAACTGCTAAT+AGG | + | chr7.1:5995813-5995832 | MS.gene051922:intron | 25.0% |
| AAAACTGCTAATATGTCTGA+GGG | + | chr7.1:5995696-5995715 | MS.gene051922:intron | 30.0% | |
| AAAATTTGTCTGTATCCAAC+TGG | + | chr7.1:5995630-5995649 | MS.gene051922:intron | 30.0% | |
| AAATTTGTCTGTATCCAACT+GGG | + | chr7.1:5995631-5995650 | MS.gene051922:intron | 30.0% | |
| ATTTCTCAACATTGGATTGT+TGG | - | chr7.1:5995416-5995435 | None:intergenic | 30.0% | |
| CAGTTAAGTTTACAATGAGA+AGG | - | chr7.1:5995808-5995827 | None:intergenic | 30.0% | |
| CCAATGTTGAGAAATTTACA+TGG | + | chr7.1:5995421-5995440 | MS.gene051922:CDS | 30.0% | |
| CCATGTAAATTTCTCAACAT+TGG | - | chr7.1:5995424-5995443 | None:intergenic | 30.0% | |
| CGTCTACTTATCAATTTACT+TGG | + | chr7.1:5995665-5995684 | MS.gene051922:intron | 30.0% | |
| CTACTTATCAATTTACTTGG+AGG | + | chr7.1:5995668-5995687 | MS.gene051922:intron | 30.0% | |
| GTTGAAATAGTTTCCAGATT+TGG | - | chr7.1:5996309-5996328 | None:intergenic | 30.0% | |
| TAACTGTGTTCCCTAAAATT+TGG | + | chr7.1:5996225-5996244 | MS.gene051922:intron | 30.0% | |
| TAGATTCTGAATTAGGATGT+GGG | + | chr7.1:5996814-5996833 | MS.gene051922:CDS | 30.0% | |
| TCCTAAAGCAAATTGAACAT+GGG | - | chr7.1:5996628-5996647 | None:intergenic | 30.0% | |
| TGTTGAGAAATTTACATGGA+AGG | + | chr7.1:5995425-5995444 | MS.gene051922:CDS | 30.0% | |
| TGTTTGAATTTGCCAGATTT+CGG | + | chr7.1:5996029-5996048 | MS.gene051922:intron | 30.0% | |
| TTAGATTCTGAATTAGGATG+TGG | + | chr7.1:5996813-5996832 | MS.gene051922:CDS | 30.0% | |
| TTCCTAAAGCAAATTGAACA+TGG | - | chr7.1:5996629-5996648 | None:intergenic | 30.0% | |
| TTTAGGTATCCACTTGAAAA+AGG | - | chr7.1:5995842-5995861 | None:intergenic | 30.0% | |
| ! | CAGAAATCTTGTGGATTTTT+AGG | - | chr7.1:5995859-5995878 | None:intergenic | 30.0% |
| ! | TGTTGGACTTCCAAATTTTA+GGG | - | chr7.1:5996238-5996257 | None:intergenic | 30.0% |
| ! | TTGTTGGACTTCCAAATTTT+AGG | - | chr7.1:5996239-5996258 | None:intergenic | 30.0% |
| !! | AAAGACTTGTTGAAAGCAAA+AGG | + | chr7.1:5996774-5996793 | MS.gene051922:CDS | 30.0% |
| !! | ATATGCTATGGTTTTGCTTT+AGG | + | chr7.1:5995607-5995626 | MS.gene051922:intron | 30.0% |
| !!! | TAGTGTGTTTTGATATGCTA+TGG | + | chr7.1:5995595-5995614 | MS.gene051922:intron | 30.0% |
| AAATTGCGACTTCTCTTTGA+CGG | - | chr7.1:5996456-5996475 | None:intergenic | 35.0% | |
| AAGCTTCATCATCCTAAAAG+AGG | + | chr7.1:5996113-5996132 | MS.gene051922:intron | 35.0% | |
| AATTTGTCTGTATCCAACTG+GGG | + | chr7.1:5995632-5995651 | MS.gene051922:intron | 35.0% | |
| ACCAACAAGACAATTACAGA+AGG | + | chr7.1:5995768-5995787 | MS.gene051922:intron | 35.0% | |
| ACCTTCTGTAATTGTCTTGT+TGG | - | chr7.1:5995772-5995791 | None:intergenic | 35.0% | |
| AGAGAAGCTAAAGGCAAAAT+TGG | + | chr7.1:5996722-5996741 | MS.gene051922:CDS | 35.0% | |
| AGCTTCATCATCCTAAAAGA+GGG | + | chr7.1:5996114-5996133 | MS.gene051922:intron | 35.0% | |
| AGTCCAACAAGCCATATTAA+AGG | + | chr7.1:5996249-5996268 | MS.gene051922:intron | 35.0% | |
| ATCCACAAGATTTCTGTCAA+TGG | + | chr7.1:5995863-5995882 | MS.gene051922:intron | 35.0% | |
| ATCCATAAGCACTTCAATTG+AGG | - | chr7.1:5996391-5996410 | None:intergenic | 35.0% | |
| ATTGTGAGTTCAATGCTAGT+GGG | + | chr7.1:5996054-5996073 | MS.gene051922:intron | 35.0% | |
| CAAGATTTCTGTCAATGGTA+TGG | + | chr7.1:5995868-5995887 | MS.gene051922:intron | 35.0% | |
| CCTAAAGCAAATTGAACATG+GGG | - | chr7.1:5996627-5996646 | None:intergenic | 35.0% | |
| GAAAACTGCTAATATGTCTG+AGG | + | chr7.1:5995695-5995714 | MS.gene051922:intron | 35.0% | |
| GAACTACAGGAAGTAAGATT+TGG | + | chr7.1:5996423-5996442 | MS.gene051922:CDS | 35.0% | |
| GACTAGAAAAGTGAAAGACA+TGG | + | chr7.1:5996524-5996543 | MS.gene051922:CDS | 35.0% | |
| GTCCAACAAGCCATATTAAA+GGG | + | chr7.1:5996250-5996269 | MS.gene051922:intron | 35.0% | |
| TACCATTGACAGAAATCTTG+TGG | - | chr7.1:5995868-5995887 | None:intergenic | 35.0% | |
| TCCAACAAGCCATATTAAAG+GGG | + | chr7.1:5996251-5996270 | MS.gene051922:CDS | 35.0% | |
| TCCATAAGCACTTCAATTGA+GGG | - | chr7.1:5996390-5996409 | None:intergenic | 35.0% | |
| TGAAAAGCTGAAAGAGAATG+TGG | + | chr7.1:5996680-5996699 | MS.gene051922:CDS | 35.0% | |
| ! | TTCACAACAAACCCTCTTTT+AGG | - | chr7.1:5996128-5996147 | None:intergenic | 35.0% |
| !! | AAGTCGCAATTTTAACGATC+TGG | + | chr7.1:5996464-5996483 | MS.gene051922:CDS | 35.0% |
| !! | GGATCTTCAAGTTTTATGGA+AGG | + | chr7.1:5996563-5996582 | MS.gene051922:CDS | 35.0% |
| !! | GTGAGGATCTTCAAGTTTTA+TGG | + | chr7.1:5996559-5996578 | MS.gene051922:CDS | 35.0% |
| !! | TAAAAGAGGGTTTGTTGTGA+AGG | + | chr7.1:5996127-5996146 | MS.gene051922:intron | 35.0% |
| !!! | AATAGGCTTCCTTTTTCAAG+TGG | + | chr7.1:5995830-5995849 | MS.gene051922:intron | 35.0% |
| !!! | CTTTCACTTTTCTAGTCTTG+AGG | - | chr7.1:5996521-5996540 | None:intergenic | 35.0% |
| AACTCACAATCACCGAAATC+TGG | - | chr7.1:5996044-5996063 | None:intergenic | 40.0% | |
| AATTGCGACTTCTCTTTGAC+GGG | - | chr7.1:5996455-5996474 | None:intergenic | 40.0% | |
| ATAAAGAACTCTCCCCAATG+CGG | - | chr7.1:5996496-5996515 | None:intergenic | 40.0% | |
| ATATTAAAGGGGAAGTCCCA+AGG | + | chr7.1:5996262-5996281 | MS.gene051922:CDS | 40.0% | |
| GATTGTGAGTTCAATGCTAG+TGG | + | chr7.1:5996053-5996072 | MS.gene051922:intron | 40.0% | |
| GTGAAGGATGCTTGTATTGT+TGG | + | chr7.1:5996143-5996162 | MS.gene051922:intron | 40.0% | |
| TGAATTAGGATGTGGGAGTT+GGG | + | chr7.1:5996821-5996840 | MS.gene051922:CDS | 40.0% | |
| TTGGGACTTCCCCTTTAATA+TGG | - | chr7.1:5996263-5996282 | None:intergenic | 40.0% | |
| TTTCAGCAGTGTAGAACTAC+AGG | + | chr7.1:5996410-5996429 | MS.gene051922:CDS | 40.0% | |
| ! | ACCCTCAATTGAAGTGCTTA+TGG | + | chr7.1:5996386-5996405 | MS.gene051922:CDS | 40.0% |
| ! | CCCCATGTTCAATTTGCTTT+AGG | + | chr7.1:5996624-5996643 | MS.gene051922:CDS | 40.0% |
| ! | TCCCCTTTAATATGGCTTGT+TGG | - | chr7.1:5996255-5996274 | None:intergenic | 40.0% |
| AATGCTAGTGGGAGTAGTTG+CGG | + | chr7.1:5996065-5996084 | MS.gene051922:intron | 45.0% | |
| AGTGAAAGACATGGATGACC+AGG | + | chr7.1:5996533-5996552 | MS.gene051922:CDS | 45.0% | |
| CTGAATTAGGATGTGGGAGT+TGG | + | chr7.1:5996820-5996839 | MS.gene051922:CDS | 45.0% | |
| GCTGGAAACAGAGAAGCTAA+AGG | + | chr7.1:5996713-5996732 | MS.gene051922:CDS | 45.0% | |
| ! | TACTCTGAGCCTTTTGTTGC+AGG | + | chr7.1:5995483-5995502 | MS.gene051922:CDS | 45.0% |
| AGATTTGGGCCTTGAACTCC+AGG | - | chr7.1:5996294-5996313 | None:intergenic | 50.0% | |
| AGGCCAAATCCTGGAGTTCA+AGG | + | chr7.1:5996282-5996301 | MS.gene051922:CDS | 50.0% | |
| AGGCTCAGAGTAAACCTCGA+CGG | - | chr7.1:5995475-5995494 | None:intergenic | 50.0% | |
| CTTGAAGATCCTCACAAGCC+TGG | - | chr7.1:5996554-5996573 | None:intergenic | 50.0% | |
| GAATGTGGTAGCTCTTGAGC+TGG | + | chr7.1:5996695-5996714 | MS.gene051922:CDS | 50.0% | |
| GGCTGCTGCTGAGGTAAATA+TGG | + | chr7.1:5996743-5996762 | MS.gene051922:CDS | 50.0% | |
| TGAACTCCAGGATTTGGCCT+TGG | - | chr7.1:5996282-5996301 | None:intergenic | 50.0% | |
| TGGAGTTCAAGGCCCAAATC+TGG | + | chr7.1:5996293-5996312 | MS.gene051922:CDS | 50.0% | |
| TGTCTGTATCCAACTGGGGA+TGG | + | chr7.1:5995636-5995655 | MS.gene051922:intron | 50.0% | |
| TTCTCGCTTGAAAACCGTCG+AGG | + | chr7.1:5995458-5995477 | MS.gene051922:CDS | 50.0% | |
| ! | GAACTCCAGGATTTGGCCTT+GGG | - | chr7.1:5996281-5996300 | None:intergenic | 50.0% |
| ! | TCTGAGCCTTTTGTTGCAGG+CGG | + | chr7.1:5995486-5995505 | MS.gene051922:CDS | 50.0% |
| !! | ATCTGGCTTTCTCCGCATTG+GGG | + | chr7.1:5996481-5996500 | MS.gene051922:CDS | 50.0% |
| !! | GATCTGGCTTTCTCCGCATT+GGG | + | chr7.1:5996480-5996499 | MS.gene051922:CDS | 50.0% |
| ACGTCTACTCCATCCCCAGT+TGG | - | chr7.1:5995648-5995667 | None:intergenic | 55.0% | |
| CATGGATGACCAGGCTTGTG+AGG | + | chr7.1:5996542-5996561 | MS.gene051922:CDS | 55.0% | |
| GAAGTCCCAAGGCCAAATCC+TGG | + | chr7.1:5996273-5996292 | MS.gene051922:CDS | 55.0% | |
| GGATAGCCGCCTGCAACAAA+AGG | - | chr7.1:5995495-5995514 | None:intergenic | 55.0% | |
| GGCAAAATTGGCTGCTGCTG+AGG | + | chr7.1:5996734-5996753 | MS.gene051922:CDS | 55.0% | |
| GGGCCTTGAACTCCAGGATT+TGG | - | chr7.1:5996288-5996307 | None:intergenic | 55.0% | |
| TTGTTGCAGGCGGCTATCCA+TGG | + | chr7.1:5995496-5995515 | MS.gene051922:CDS | 55.0% | |
| !! | CGATCTGGCTTTCTCCGCAT+TGG | + | chr7.1:5996479-5996498 | MS.gene051922:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 5995408 | 5996851 | 5995408 | ID=MS.gene051922 |
| chr7.1 | mRNA | 5995408 | 5996851 | 5995408 | ID=MS.gene051922.t1;Parent=MS.gene051922 |
| chr7.1 | exon | 5995408 | 5995517 | 5995408 | ID=MS.gene051922.t1.exon1;Parent=MS.gene051922.t1 |
| chr7.1 | CDS | 5995408 | 5995517 | 5995408 | ID=cds.MS.gene051922.t1;Parent=MS.gene051922.t1 |
| chr7.1 | exon | 5996251 | 5996851 | 5996251 | ID=MS.gene051922.t1.exon2;Parent=MS.gene051922.t1 |
| chr7.1 | CDS | 5996251 | 5996851 | 5996251 | ID=cds.MS.gene051922.t1;Parent=MS.gene051922.t1 |
| Gene Sequence |
| Protein sequence |
