Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038328.t1 | AET00387.2 | 62.2 | 632 | 146 | 6 | 2 | 568 | 189 | 792 | 8.50E-194 | 686.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038328.t1 | Q9FPT1 | 51.6 | 308 | 109 | 7 | 3 | 299 | 563 | 841 | 1.2e-71 | 272.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038328.t1 | G7KD59 | 62.2 | 632 | 146 | 6 | 2 | 568 | 189 | 792 | 6.1e-194 | 686.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038328.t1 | MTR_5g091430 | 65.458 | 579 | 160 | 5 | 1 | 568 | 1 | 550 | 0.0 | 713 |
| MS.gene038328.t1 | MTR_5g091450 | 60.635 | 630 | 155 | 7 | 4 | 568 | 191 | 792 | 0.0 | 694 |
| MS.gene038328.t1 | MTR_5g091180 | 68.324 | 543 | 125 | 5 | 3 | 541 | 203 | 702 | 0.0 | 674 |
| MS.gene038328.t1 | MTR_5g091410 | 57.366 | 577 | 180 | 9 | 1 | 568 | 30 | 549 | 0.0 | 552 |
| MS.gene038328.t1 | MTR_5g091530 | 57.705 | 305 | 84 | 2 | 4 | 308 | 119 | 378 | 4.34e-108 | 329 |
| MS.gene038328.t1 | MTR_3g079840 | 61.888 | 286 | 78 | 4 | 4 | 285 | 564 | 822 | 3.88e-104 | 338 |
| MS.gene038328.t1 | MTR_3g079840 | 61.888 | 286 | 78 | 4 | 4 | 285 | 563 | 821 | 3.90e-104 | 338 |
| MS.gene038328.t1 | MTR_5g091550 | 54.416 | 351 | 88 | 6 | 2 | 326 | 179 | 483 | 1.01e-103 | 322 |
| MS.gene038328.t1 | MTR_5g091550 | 54.416 | 351 | 88 | 6 | 2 | 326 | 174 | 478 | 1.04e-103 | 321 |
| MS.gene038328.t1 | MTR_5g086700 | 63.287 | 286 | 74 | 5 | 4 | 285 | 568 | 826 | 1.04e-102 | 335 |
| MS.gene038328.t1 | MTR_5g086700 | 65.428 | 269 | 63 | 4 | 4 | 269 | 568 | 809 | 1.40e-102 | 334 |
| MS.gene038328.t1 | MTR_1g041240 | 53.846 | 286 | 100 | 6 | 5 | 285 | 565 | 823 | 1.90e-84 | 285 |
| MS.gene038328.t1 | MTR_1g041240 | 53.846 | 286 | 100 | 6 | 5 | 285 | 566 | 824 | 1.92e-84 | 285 |
| MS.gene038328.t1 | MTR_1g041240 | 53.846 | 286 | 100 | 6 | 5 | 285 | 564 | 822 | 2.12e-84 | 285 |
| MS.gene038328.t1 | MTR_5g091460 | 93.182 | 44 | 3 | 0 | 1 | 44 | 1 | 44 | 9.68e-21 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038328.t1 | AT5G06600 | 51.623 | 308 | 109 | 7 | 3 | 299 | 563 | 841 | 3.20e-82 | 277 |
| MS.gene038328.t1 | AT5G06600 | 51.623 | 308 | 109 | 7 | 3 | 299 | 563 | 841 | 1.65e-81 | 276 |
| MS.gene038328.t1 | AT5G06600 | 51.623 | 308 | 109 | 7 | 3 | 299 | 562 | 840 | 1.71e-81 | 276 |
| MS.gene038328.t1 | AT3G11910 | 50.523 | 287 | 110 | 6 | 3 | 285 | 561 | 819 | 3.65e-77 | 265 |
| MS.gene038328.t1 | AT3G11910 | 50.523 | 287 | 110 | 6 | 3 | 285 | 561 | 819 | 3.65e-77 | 265 |
| MS.gene038328.t1 | AT3G11910 | 50.523 | 287 | 110 | 6 | 3 | 285 | 560 | 818 | 3.66e-77 | 265 |
| MS.gene038328.t1 | AT3G11910 | 50.523 | 287 | 110 | 6 | 3 | 285 | 560 | 818 | 3.66e-77 | 265 |
Find 114 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGAATTTAAATTGTTTC+TGG | 0.145694 | 5.4:-72192959 | MS.gene038328:CDS |
| TTCAACCAAGTCTCCTTTAA+AGG | 0.155254 | 5.4:+72191437 | None:intergenic |
| CTCTTGAATCTCAACAATTT+TGG | 0.160914 | 5.4:+72191092 | None:intergenic |
| CAGCTCTATTCCAGCGCTTT+TGG | 0.184638 | 5.4:-72194054 | MS.gene038328:CDS |
| AGCAACTTCTTCAGGAATTA+AGG | 0.204761 | 5.4:-72191467 | MS.gene038328:CDS |
| CAATACTGACTTGTTCTAAT+TGG | 0.215232 | 5.4:+72191328 | None:intergenic |
| TCCAATTCAGATTGAGCTTC+TGG | 0.218587 | 5.4:+72190967 | None:intergenic |
| TTAAGGGATATTGCCTTTAA+AGG | 0.228541 | 5.4:-72191450 | MS.gene038328:CDS |
| ATGTATGTCAATGGCCTATA+TGG | 0.240759 | 5.4:+72193998 | None:intergenic |
| CCATGAATGCAGTTAGAAAA+TGG | 0.255703 | 5.4:-72192056 | MS.gene038328:intron |
| ATCAACGAGGCGCTGGAAAA+TGG | 0.273481 | 5.4:+72191026 | None:intergenic |
| CCTTCAGTGCTTCATTATCT+TGG | 0.275385 | 5.4:+72191217 | None:intergenic |
| ATCTTGGTCAGTGCCGTTCT+TGG | 0.308840 | 5.4:+72191233 | None:intergenic |
| AGCTGTTATGCCAAACTCTT+TGG | 0.310620 | 5.4:+72194072 | None:intergenic |
| AGCAAATTCATAAATCAAAA+TGG | 0.313333 | 5.4:+72190904 | None:intergenic |
| CGAGAGAGTTGAGTTGTCTT+TGG | 0.316317 | 5.4:+72191148 | None:intergenic |
| ACTACATTGAAGTTAACTTT+AGG | 0.329765 | 5.4:+72191393 | None:intergenic |
| TTAAATGAGTTGGCTGGTTA+TGG | 0.338665 | 5.4:-72192592 | MS.gene038328:CDS |
| CCTCCCCGAGCAACTTCTTC+AGG | 0.343664 | 5.4:-72191475 | MS.gene038328:CDS |
| GTTTCGAGACTTCTTGTCCT+TGG | 0.355620 | 5.4:+72191508 | None:intergenic |
| GAAAGGGTTGCCAAAGAGTT+TGG | 0.356427 | 5.4:-72194082 | MS.gene038328:CDS |
| TTTGTGGCTAAGAGAGAAAA+AGG | 0.359629 | 5.4:+72191795 | None:intergenic |
| TCCAGAAGCTCAATCTGAAT+TGG | 0.362495 | 5.4:-72190968 | MS.gene038328:CDS |
| CTCCAATGATTCTTCATCGT+TGG | 0.376686 | 5.4:+72191770 | None:intergenic |
| TAAAGATCAATCTCTTCATC+AGG | 0.377074 | 5.4:+72192568 | None:intergenic |
| ATTTAAATTGTTTCTGGAAG+TGG | 0.394215 | 5.4:-72192953 | MS.gene038328:CDS |
| CTTGTCCTTGGGAAGAATGC+TGG | 0.397114 | 5.4:+72191520 | None:intergenic |
| TCACCTCTACATTATTATAA+AGG | 0.398793 | 5.4:-72195144 | MS.gene038328:intron |
| AAACATTATAGCCGAAGAAA+TGG | 0.400964 | 5.4:-72191736 | MS.gene038328:CDS |
| AGGACAAGAAGTCTCGAAAC+TGG | 0.402354 | 5.4:-72191505 | MS.gene038328:CDS |
| GCAACTTCTTCAGGAATTAA+GGG | 0.402821 | 5.4:-72191466 | MS.gene038328:CDS |
| CTTGTGTGTGGCTCCGCCAC+TGG | 0.404376 | 5.4:-72193296 | MS.gene038328:intron |
| ACAGGCTCACACATGACATT+TGG | 0.405804 | 5.4:+72192202 | None:intergenic |
| TTTCGAGACTTCTTGTCCTT+GGG | 0.408174 | 5.4:+72191509 | None:intergenic |
| ATAGTGGTATATTACTAGTA+TGG | 0.412254 | 5.4:-72193359 | MS.gene038328:intron |
| ATCCAACGATGAAGAATCAT+TGG | 0.412298 | 5.4:-72191772 | MS.gene038328:CDS |
| TTTGTCCACATCCATTTCTT+CGG | 0.418411 | 5.4:+72191725 | None:intergenic |
| GAAGCTCTTTCAAATCTTCA+AGG | 0.421272 | 5.4:-72190935 | MS.gene038328:CDS |
| TTGTCCTTGGGAAGAATGCT+GGG | 0.425138 | 5.4:+72191521 | None:intergenic |
| ATTGAAGCTCAACAATCAAA+AGG | 0.436783 | 5.4:-72191699 | MS.gene038328:CDS |
| TGCACATATTTCATGTATGA+AGG | 0.442835 | 5.4:+72191966 | None:intergenic |
| AGAAGTTGCTCGGGGAGGTT+GGG | 0.444811 | 5.4:+72191480 | None:intergenic |
| ATTATCAAGGTTAAATGAGT+TGG | 0.446833 | 5.4:-72192602 | MS.gene038328:CDS |
| GTTTGTGAAGGAAGCCTTTG+AGG | 0.447787 | 5.4:+72191173 | None:intergenic |
| CTTGGAAGAATTTGATGCTA+TGG | 0.451764 | 5.4:-72191610 | MS.gene038328:CDS |
| GAGAGTTGAGTTGTCTTTGG+TGG | 0.454116 | 5.4:+72191151 | None:intergenic |
| TCTGGAAGTGGAGCCTTGGC+TGG | 0.462235 | 5.4:-72192941 | MS.gene038328:intron |
| TTCATGTATGAAGGCACGTC+AGG | 0.464567 | 5.4:+72191975 | None:intergenic |
| GAAATATGTGCACAATAGTC+AGG | 0.466264 | 5.4:-72191955 | MS.gene038328:intron |
| ACCATACATATCGCCCATAT+AGG | 0.467628 | 5.4:-72194012 | MS.gene038328:CDS |
| CCCTTTGATGGCAGTTATGT+TGG | 0.471080 | 5.4:-72192664 | MS.gene038328:intron |
| TTTGATCATCAACGAGGCGC+TGG | 0.476333 | 5.4:+72191019 | None:intergenic |
| AATTCCTGAAGAAGTTGCTC+GGG | 0.477785 | 5.4:+72191471 | None:intergenic |
| TTGAAGCTCAACAATCAAAA+GGG | 0.479627 | 5.4:-72191698 | MS.gene038328:CDS |
| TGGTATATTACTAGTATGGT+GGG | 0.483421 | 5.4:-72193355 | MS.gene038328:CDS |
| GCCTATATGGGCGATATGTA+TGG | 0.483842 | 5.4:+72194011 | None:intergenic |
| AAGAAGTTGCTCGGGGAGGT+TGG | 0.494240 | 5.4:+72191479 | None:intergenic |
| AACCTTGATAATATTTCTGA+TGG | 0.502319 | 5.4:+72192613 | None:intergenic |
| TGTTTCTGGAAGTGGAGCCT+TGG | 0.502644 | 5.4:-72192945 | MS.gene038328:CDS |
| TGTATGTCAATGGCCTATAT+GGG | 0.504508 | 5.4:+72193999 | None:intergenic |
| TGAAGAGATTGATCTTTATG+AGG | 0.508109 | 5.4:-72192563 | MS.gene038328:intron |
| GAAGACCTTGCAGAACAGAT+TGG | 0.509308 | 5.4:-72194996 | MS.gene038328:CDS |
| GTTGGTACCTTCATCATGAG+TGG | 0.516587 | 5.4:+72191665 | None:intergenic |
| GAGCCACACACAAGGTTGTG+TGG | 0.516989 | 5.4:+72193305 | None:intergenic |
| TATTGCCTTTAAAGGAGACT+TGG | 0.518882 | 5.4:-72191442 | MS.gene038328:CDS |
| GTGGTATATTACTAGTATGG+TGG | 0.518886 | 5.4:-72193356 | MS.gene038328:CDS |
| GGAGATATATTTGTGCAGGC+AGG | 0.519043 | 5.4:-72193331 | MS.gene038328:CDS |
| TCCTCACAATGTTGTTGAGA+AGG | 0.519498 | 5.4:+72191298 | None:intergenic |
| TCAAGGTTAAATGAGTTGGC+TGG | 0.524054 | 5.4:-72192598 | MS.gene038328:CDS |
| TTGCAAAACTACAAGAAGAA+AGG | 0.525158 | 5.4:-72191116 | MS.gene038328:CDS |
| GTATATTACTAGTATGGTGG+GGG | 0.527229 | 5.4:-72193353 | MS.gene038328:CDS |
| AAGCTCTTTCAAATCTTCAA+GGG | 0.529434 | 5.4:-72190934 | MS.gene038328:CDS |
| AGAATCTTTGTGAACTGTAA+TGG | 0.533981 | 5.4:-72192640 | MS.gene038328:CDS |
| TCTTCCTCAATGTATGTCAA+TGG | 0.534957 | 5.4:+72193989 | None:intergenic |
| TTGACATACATTGAGGAAGA+TGG | 0.536520 | 5.4:-72193986 | MS.gene038328:CDS |
| CCAAGATAATGAAGCACTGA+AGG | 0.541521 | 5.4:-72191217 | MS.gene038328:CDS |
| TAATTCCTGAAGAAGTTGCT+CGG | 0.550686 | 5.4:+72191470 | None:intergenic |
| AGCCATCAGAAATATTATCA+AGG | 0.558724 | 5.4:-72192615 | MS.gene038328:CDS |
| AAAATTAGTCAGCATAGACT+TGG | 0.559909 | 5.4:-72191628 | MS.gene038328:CDS |
| TTGTCTTTGGTGGTTTGTGA+AGG | 0.561186 | 5.4:+72191161 | None:intergenic |
| TCTCTTATTGAGAGGTGCAA+TGG | 0.562706 | 5.4:+72192812 | None:intergenic |
| TTGCCCATACCCAAAAGCGC+TGG | 0.564519 | 5.4:+72194044 | None:intergenic |
| ACCTTCTCAACAACATTGTG+AGG | 0.565464 | 5.4:-72191299 | MS.gene038328:CDS |
| ATGAAGGCACGTCAGGATAA+CGG | 0.567117 | 5.4:+72191982 | None:intergenic |
| GGTATATTACTAGTATGGTG+GGG | 0.567908 | 5.4:-72193354 | MS.gene038328:CDS |
| CTCAACATTTCAAGAAAACC+AGG | 0.571330 | 5.4:-72192170 | MS.gene038328:intron |
| CCTTTCCAATCTGTTCTGCA+AGG | 0.581624 | 5.4:+72194991 | None:intergenic |
| AAATCCCAGCATTCTTCCCA+AGG | 0.582919 | 5.4:-72191525 | MS.gene038328:CDS |
| CAACGATGAAGAATCATTGG+AGG | 0.583283 | 5.4:-72191769 | MS.gene038328:CDS |
| ACAGAAAATATTGACCTCAA+AGG | 0.583920 | 5.4:-72191187 | MS.gene038328:CDS |
| AGTTAACTTCAATGTAGTCA+AGG | 0.584951 | 5.4:-72191388 | MS.gene038328:CDS |
| ATGGTAGATGAGGATGTCAT+TGG | 0.586893 | 5.4:-72191591 | MS.gene038328:CDS |
| AGCCACACACAAGGTTGTGT+GGG | 0.590080 | 5.4:+72193306 | None:intergenic |
| ACAGAGACCACTCATGATGA+AGG | 0.591673 | 5.4:-72191672 | MS.gene038328:CDS |
| TATAGCCGAAGAAATGGATG+TGG | 0.593632 | 5.4:-72191730 | MS.gene038328:CDS |
| AATATATCTCTCTTATTGAG+AGG | 0.597319 | 5.4:+72192804 | None:intergenic |
| GACTTGTTCTAATTGGAGAG+AGG | 0.598740 | 5.4:+72191335 | None:intergenic |
| AATTCATAAATCAAAATGGA+GGG | 0.618305 | 5.4:+72190908 | None:intergenic |
| TAGGCCATTGACATACATTG+AGG | 0.622837 | 5.4:-72193993 | MS.gene038328:CDS |
| GAACGAGACTTAGCCAAGAA+CGG | 0.625013 | 5.4:-72191246 | MS.gene038328:CDS |
| CAGTGGCGGAGCCACACACA+AGG | 0.627745 | 5.4:+72193297 | None:intergenic |
| CCTTGCAGAACAGATTGGAA+AGG | 0.629899 | 5.4:-72194991 | MS.gene038328:CDS |
| AGCCCACACAACCTTGTGTG+TGG | 0.629912 | 5.4:-72193308 | MS.gene038328:CDS |
| AAAGATCAATCTCTTCATCA+GGG | 0.632971 | 5.4:+72192569 | None:intergenic |
| CCTGAAGAAGTTGCTCGGGG+AGG | 0.638160 | 5.4:+72191475 | None:intergenic |
| ATTTGATGCTATGGTAGATG+AGG | 0.641239 | 5.4:-72191601 | MS.gene038328:CDS |
| AAATTCATAAATCAAAATGG+AGG | 0.646024 | 5.4:+72190907 | None:intergenic |
| TGAAGCTCAACAATCAAAAG+GGG | 0.646623 | 5.4:-72191697 | MS.gene038328:CDS |
| CGTCACGAACAGACCAGTGG+CGG | 0.651915 | 5.4:+72193283 | None:intergenic |
| TCGTAGACCTTGGAAAAGTG+AGG | 0.656112 | 5.4:-72194953 | MS.gene038328:CDS |
| ACACCTTTATAATAATGTAG+AGG | 0.669122 | 5.4:+72195141 | None:intergenic |
| ATTCCTGAAGAAGTTGCTCG+GGG | 0.673145 | 5.4:+72191472 | None:intergenic |
| TATATTACTAGTATGGTGGG+GGG | 0.682821 | 5.4:-72193352 | MS.gene038328:CDS |
| ACTTGATTTGATCATCAACG+AGG | 0.739709 | 5.4:+72191013 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTTTTTAATTTGTAG+CGG | - | chr5.4:72193573-72193592 | MS.gene038328:intron | 10.0% |
| !!! | TATTTTATAATTTATGAAGT+TGG | - | chr5.4:72191901-72191920 | MS.gene038328:intron | 10.0% |
| !!! | TGTTAGTTTTATTTTTTTTA+AGG | - | chr5.4:72193964-72193983 | MS.gene038328:intron | 10.0% |
| !! | AATAAAGAATGAGTATAAAA+AGG | + | chr5.4:72193049-72193068 | None:intergenic | 15.0% |
| !! | AATTTAAAGAGAAATCAAAA+TGG | + | chr5.4:72192926-72192945 | None:intergenic | 15.0% |
| !! | ATATTGTATGATTATTTGTA+TGG | - | chr5.4:72191549-72191568 | MS.gene038328:CDS | 15.0% |
| !! | TTTCTTGATTATGATTTATT+AGG | + | chr5.4:72191290-72191309 | None:intergenic | 15.0% |
| !!! | AAACTTAATAAAAAAGCATA+TGG | + | chr5.4:72193618-72193637 | None:intergenic | 15.0% |
| !!! | AATCTTAGTCTTATTAATTT+TGG | - | chr5.4:72191224-72191243 | MS.gene038328:CDS | 15.0% |
| !!! | ATATGCTTTTTTATTAAGTT+TGG | - | chr5.4:72193617-72193636 | MS.gene038328:intron | 15.0% |
| !!! | TATGCTTTTTTATTAAGTTT+GGG | - | chr5.4:72193618-72193637 | MS.gene038328:intron | 15.0% |
| !! | AAAATAAACAAAGCTAAAAC+AGG | + | chr5.4:72192901-72192920 | None:intergenic | 20.0% |
| !! | AAATCATAATCAAGAAAAAC+AGG | - | chr5.4:72191293-72191312 | MS.gene038328:CDS | 20.0% |
| !! | AACATATGTTAAAATCACAA+TGG | + | chr5.4:72193351-72193370 | None:intergenic | 20.0% |
| !! | AATCACTAAACTGTTTAAAT+AGG | + | chr5.4:72191599-72191618 | None:intergenic | 20.0% |
| !! | ACAGACTAAACATAAATATA+AGG | + | chr5.4:72192223-72192242 | None:intergenic | 20.0% |
| !! | ACTTCAAATCTTAAAGAAAT+CGG | + | chr5.4:72193022-72193041 | None:intergenic | 20.0% |
| !! | ATATATTTCATATGAATCTC+TGG | - | chr5.4:72191858-72191877 | MS.gene038328:intron | 20.0% |
| !! | CAGACTAAACATAAATATAA+GGG | + | chr5.4:72192222-72192241 | None:intergenic | 20.0% |
| !! | GAAATAAAATCTCACAAAAA+CGG | - | chr5.4:72192408-72192427 | MS.gene038328:intron | 20.0% |
| !! | GATGAACTACATTATTATAT+AGG | - | chr5.4:72193229-72193248 | MS.gene038328:intron | 20.0% |
| !! | TTGGTTGAAAAATTTAAAGA+AGG | - | chr5.4:72194650-72194669 | MS.gene038328:intron | 20.0% |
| !! | TTGTCGTATTTGTAATTATT+AGG | + | chr5.4:72191331-72191350 | None:intergenic | 20.0% |
| !!! | AAAAATCATGATGTTTTAGT+TGG | - | chr5.4:72191824-72191843 | MS.gene038328:intron | 20.0% |
| !!! | ACCATTATATGAAATTTGTT+GGG | - | chr5.4:72192280-72192299 | MS.gene038328:intron | 20.0% |
| !!! | ATTGTGATTTTAACATATGT+TGG | - | chr5.4:72193350-72193369 | MS.gene038328:CDS | 20.0% |
| !!! | CATTTTTTGTTTTCTTGTTT+AGG | - | chr5.4:72194253-72194272 | MS.gene038328:intron | 20.0% |
| !!! | TTATTTGTATGGATTGTATT+CGG | - | chr5.4:72191560-72191579 | MS.gene038328:CDS | 20.0% |
| !!! | TTGTGATTTTAACATATGTT+GGG | - | chr5.4:72193351-72193370 | MS.gene038328:CDS | 20.0% |
| !!! | TTTTTGAGGTTTAAAATCAA+AGG | - | chr5.4:72194149-72194168 | MS.gene038328:intron | 20.0% |
| ! | AAAACTAACATAACACAATG+AGG | + | chr5.4:72193954-72193973 | None:intergenic | 25.0% |
| ! | AAACAGGTAAAATTAACTGT+TGG | + | chr5.4:72192885-72192904 | None:intergenic | 25.0% |
| ! | AAACATAAATATAAGGGAGA+GGG | + | chr5.4:72192216-72192235 | None:intergenic | 25.0% |
| ! | AAATGAGAAGTTAGAAATCA+AGG | + | chr5.4:72192168-72192187 | None:intergenic | 25.0% |
| ! | AATATATCTCTCTTATTGAG+AGG | + | chr5.4:72193272-72193291 | None:intergenic | 25.0% |
| ! | ACACCTTTATAATAATGTAG+AGG | + | chr5.4:72190935-72190954 | None:intergenic | 25.0% |
| ! | ACTACATTGAAGTTAACTTT+AGG | + | chr5.4:72194683-72194702 | None:intergenic | 25.0% |
| ! | AGAAAGGGATAAGAATAAAT+GGG | + | chr5.4:72194213-72194232 | None:intergenic | 25.0% |
| ! | AGCAGAATTTAAATTGTTTC+TGG | - | chr5.4:72193114-72193133 | MS.gene038328:intron | 25.0% |
| ! | ATAGTGGTATATTACTAGTA+TGG | - | chr5.4:72192714-72192733 | MS.gene038328:intron | 25.0% |
| ! | ATGGATAAGTGTTTAAAAGT+GGG | + | chr5.4:72192454-72192473 | None:intergenic | 25.0% |
| ! | ATTATAATGATTGGCAATGT+TGG | - | chr5.4:72192830-72192849 | MS.gene038328:intron | 25.0% |
| ! | ATTATCAAGGTTAAATGAGT+TGG | - | chr5.4:72193471-72193490 | MS.gene038328:intron | 25.0% |
| ! | ATTTATTCTTATCCCTTTCT+AGG | - | chr5.4:72194213-72194232 | MS.gene038328:intron | 25.0% |
| ! | CAACCTACTATTATAATGAT+TGG | - | chr5.4:72192821-72192840 | MS.gene038328:CDS | 25.0% |
| ! | CACCATTATATGAAATTTGT+TGG | - | chr5.4:72192279-72192298 | MS.gene038328:intron | 25.0% |
| ! | CATCAAATCAGCAAAATAAT+TGG | + | chr5.4:72194175-72194194 | None:intergenic | 25.0% |
| ! | CTTTCAAAAAGCTTATGTTA+TGG | - | chr5.4:72194052-72194071 | MS.gene038328:CDS | 25.0% |
| ! | GTTTAAATAGGCCTAATTAA+CGG | + | chr5.4:72191587-72191606 | None:intergenic | 25.0% |
| ! | TAAACATAAATATAAGGGAG+AGG | + | chr5.4:72192217-72192236 | None:intergenic | 25.0% |
| ! | TAGAAAGGGATAAGAATAAA+TGG | + | chr5.4:72194214-72194233 | None:intergenic | 25.0% |
| ! | TCACCTCTACATTATTATAA+AGG | - | chr5.4:72190929-72190948 | MS.gene038328:CDS | 25.0% |
| ! | TCATTCTTTATTCAAATTGC+AGG | - | chr5.4:72193057-72193076 | MS.gene038328:intron | 25.0% |
| ! | TCCCAACAAATTTCATATAA+TGG | + | chr5.4:72192284-72192303 | None:intergenic | 25.0% |
| ! | TTGCCAATCATTATAATAGT+AGG | + | chr5.4:72192827-72192846 | None:intergenic | 25.0% |
| !! | AACCTTGATAATATTTCTGA+TGG | + | chr5.4:72193463-72193482 | None:intergenic | 25.0% |
| !! | AACTTCTCATTTTATGACTT+TGG | - | chr5.4:72192176-72192195 | MS.gene038328:CDS | 25.0% |
| !!! | AGTGTAATATGTTTTGTTTG+TGG | - | chr5.4:72192599-72192618 | MS.gene038328:CDS | 25.0% |
| !!! | ATTATATGAAATTTGTTGGG+AGG | - | chr5.4:72192283-72192302 | MS.gene038328:intron | 25.0% |
| !!! | ATTTAAATTGTTTCTGGAAG+TGG | - | chr5.4:72193120-72193139 | MS.gene038328:intron | 25.0% |
| !!! | GAAGTTGTATACTATTTTGA+AGG | - | chr5.4:72193179-72193198 | MS.gene038328:intron | 25.0% |
| !!! | GTGTAATATGTTTTGTTTGT+GGG | - | chr5.4:72192600-72192619 | MS.gene038328:CDS | 25.0% |
| !!! | TGTGATTTTAACATATGTTG+GGG | - | chr5.4:72193352-72193371 | MS.gene038328:CDS | 25.0% |
| !!! | TTATATGAAATTTGTTGGGA+GGG | - | chr5.4:72192284-72192303 | MS.gene038328:intron | 25.0% |
| !!! | TTTTGAGGTGTTTAATTTGT+TGG | + | chr5.4:72194429-72194448 | None:intergenic | 25.0% |
| AAAATTAGTCAGCATAGACT+TGG | - | chr5.4:72194445-72194464 | MS.gene038328:intron | 30.0% | |
| AAACATTATAGCCGAAGAAA+TGG | - | chr5.4:72194337-72194356 | MS.gene038328:intron | 30.0% | |
| AAAGATCAATCTCTTCATCA+GGG | + | chr5.4:72193507-72193526 | None:intergenic | 30.0% | |
| AAATATGTAACACTTGCAAG+TGG | - | chr5.4:72192953-72192972 | MS.gene038328:CDS | 30.0% | |
| AAGAGATCTTGTGAATTTAC+AGG | + | chr5.4:72192114-72192133 | None:intergenic | 30.0% | |
| AAGCTCTTTCAAATCTTCAA+GGG | - | chr5.4:72195139-72195158 | MS.gene038328:intron | 30.0% | |
| AATTGCAACTATGTAGGAAA+GGG | - | chr5.4:72191975-72191994 | MS.gene038328:CDS | 30.0% | |
| ACAGAAAATATTGACCTCAA+AGG | - | chr5.4:72194886-72194905 | MS.gene038328:intron | 30.0% | |
| AGAATCTTTGTGAACTGTAA+TGG | - | chr5.4:72193433-72193452 | MS.gene038328:intron | 30.0% | |
| AGCCATCAGAAATATTATCA+AGG | - | chr5.4:72193458-72193477 | MS.gene038328:intron | 30.0% | |
| AGTTAACTTCAATGTAGTCA+AGG | - | chr5.4:72194685-72194704 | MS.gene038328:intron | 30.0% | |
| ATATAAAAAGTTACCAGCCA+AGG | + | chr5.4:72193148-72193167 | None:intergenic | 30.0% | |
| ATCCTAAAAAAGAGAAGCTA+AGG | - | chr5.4:72193312-72193331 | MS.gene038328:CDS | 30.0% | |
| ATTGAAGCTCAACAATCAAA+AGG | - | chr5.4:72194374-72194393 | MS.gene038328:intron | 30.0% | |
| CATGGATAAGTGTTTAAAAG+TGG | + | chr5.4:72192455-72192474 | None:intergenic | 30.0% | |
| CTGTTTAATTGCAACTATGT+AGG | - | chr5.4:72191969-72191988 | MS.gene038328:CDS | 30.0% | |
| GATAACACATGATACTTCTT+AGG | - | chr5.4:72191043-72191062 | MS.gene038328:CDS | 30.0% | |
| TAAAGATCAATCTCTTCATC+AGG | + | chr5.4:72193508-72193527 | None:intergenic | 30.0% | |
| TAATAACTAAGCTAGCGTAA+TGG | - | chr5.4:72193666-72193685 | MS.gene038328:intron | 30.0% | |
| TAATTGCAACTATGTAGGAA+AGG | - | chr5.4:72191974-72191993 | MS.gene038328:CDS | 30.0% | |
| TAGAGTAAAAAGATCCTATG+AGG | + | chr5.4:72191483-72191502 | None:intergenic | 30.0% | |
| TCTTTATTCAAATTGCAGGT+TGG | - | chr5.4:72193061-72193080 | MS.gene038328:intron | 30.0% | |
| TGAAGAGATTGATCTTTATG+AGG | - | chr5.4:72193510-72193529 | MS.gene038328:intron | 30.0% | |
| TGCACATATTTCATGTATGA+AGG | + | chr5.4:72194110-72194129 | None:intergenic | 30.0% | |
| TGGATAAGTGTTTAAAAGTG+GGG | + | chr5.4:72192453-72192472 | None:intergenic | 30.0% | |
| TGGTATATTACTAGTATGGT+GGG | - | chr5.4:72192718-72192737 | MS.gene038328:intron | 30.0% | |
| TGTGTTAAAATGTCTCACAT+CGG | + | chr5.4:72192489-72192508 | None:intergenic | 30.0% | |
| TTAAGGGATATTGCCTTTAA+AGG | - | chr5.4:72194623-72194642 | MS.gene038328:intron | 30.0% | |
| TTGAAGCTCAACAATCAAAA+GGG | - | chr5.4:72194375-72194394 | MS.gene038328:intron | 30.0% | |
| TTGCAAAACTACAAGAAGAA+AGG | - | chr5.4:72194957-72194976 | MS.gene038328:CDS | 30.0% | |
| TTGTGTGAAACGTAGAATTA+GGG | + | chr5.4:72191662-72191681 | None:intergenic | 30.0% | |
| TTTATTAAGTTTGGGTCAAG+CGG | - | chr5.4:72193626-72193645 | MS.gene038328:intron | 30.0% | |
| ! | AATGTTGAGTTCTTTTCAAC+AGG | + | chr5.4:72193892-72193911 | None:intergenic | 30.0% |
| ! | AGCCAGAAATTTTGAATAGT+GGG | - | chr5.4:72192254-72192273 | MS.gene038328:intron | 30.0% |
| ! | ATACCACTATTAGATTTTGC+AGG | + | chr5.4:72192704-72192723 | None:intergenic | 30.0% |
| ! | ATTCAAGTTAAAGCCTAGAA+AGG | + | chr5.4:72194229-72194248 | None:intergenic | 30.0% |
| ! | CTCTTGAATCTCAACAATTT+TGG | + | chr5.4:72194984-72195003 | None:intergenic | 30.0% |
| ! | GACTTCATTTAACGTTTTCA+AGG | - | chr5.4:72191163-72191182 | MS.gene038328:CDS | 30.0% |
| ! | TGGTTCTATCATGTTGTATT+GGG | - | chr5.4:72191415-72191434 | MS.gene038328:CDS | 30.0% |
| ! | TTCAAGTTAAAGCCTAGAAA+GGG | + | chr5.4:72194228-72194247 | None:intergenic | 30.0% |
| ! | TTTTACACTTCCATGAAACA+AGG | - | chr5.4:72192324-72192343 | MS.gene038328:intron | 30.0% |
| !! | ACATTTTAACACAGTGAGAT+GGG | - | chr5.4:72192496-72192515 | MS.gene038328:intron | 30.0% |
| !! | ATCGATCAAGTTTTATCAGA+AGG | - | chr5.4:72194509-72194528 | MS.gene038328:intron | 30.0% |
| !! | ATTATAAAGGTGTTGTAAGC+TGG | - | chr5.4:72190942-72190961 | MS.gene038328:CDS | 30.0% |
| !! | CAATACTGACTTGTTCTAAT+TGG | + | chr5.4:72194748-72194767 | None:intergenic | 30.0% |
| !! | GTCAGGTATTTTCTTTTTTG+AGG | - | chr5.4:72194135-72194154 | MS.gene038328:intron | 30.0% |
| !! | TCGATCAAGTTTTATCAGAA+GGG | - | chr5.4:72194510-72194529 | MS.gene038328:intron | 30.0% |
| !! | TTGGTTCTATCATGTTGTAT+TGG | - | chr5.4:72191414-72191433 | MS.gene038328:CDS | 30.0% |
| !!! | AATATGTTTTGTTTGTGGGA+TGG | - | chr5.4:72192604-72192623 | MS.gene038328:CDS | 30.0% |
| !!! | ATATGTTTTGTTTGTGGGAT+GGG | - | chr5.4:72192605-72192624 | MS.gene038328:CDS | 30.0% |
| !!! | TACCTTAGCTTCTCTTTTTT+AGG | + | chr5.4:72193317-72193336 | None:intergenic | 30.0% |
| AAGGCATGAAATTAAAGCAC+AGG | - | chr5.4:72193198-72193217 | MS.gene038328:intron | 35.0% | |
| AGCAACTTCTTCAGGAATTA+AGG | - | chr5.4:72194606-72194625 | MS.gene038328:intron | 35.0% | |
| AGTTTCATCCCACAAATTGA+TGG | - | chr5.4:72191770-72191789 | MS.gene038328:CDS | 35.0% | |
| ATAACACAATGAGGATCAAC+TGG | + | chr5.4:72193945-72193964 | None:intergenic | 35.0% | |
| ATACTCCTTTGATGAAGTGT+CGG | - | chr5.4:72191376-72191395 | MS.gene038328:CDS | 35.0% | |
| ATATGGCTTCTAAACATGCA+AGG | + | chr5.4:72193601-72193620 | None:intergenic | 35.0% | |
| ATCCAACGATGAAGAATCAT+TGG | - | chr5.4:72194301-72194320 | MS.gene038328:intron | 35.0% | |
| ATGTATGTCAATGGCCTATA+TGG | + | chr5.4:72192078-72192097 | None:intergenic | 35.0% | |
| ATTTGATGCTATGGTAGATG+AGG | - | chr5.4:72194472-72194491 | MS.gene038328:intron | 35.0% | |
| CATGGAGGAAAAGTTAAATG+TGG | + | chr5.4:72191744-72191763 | None:intergenic | 35.0% | |
| CCATGAATGCAGTTAGAAAA+TGG | - | chr5.4:72194017-72194036 | MS.gene038328:CDS | 35.0% | |
| CGTTAGGACATAAAAACTGT+AGG | + | chr5.4:72192992-72193011 | None:intergenic | 35.0% | |
| CTCAACATTTCAAGAAAACC+AGG | - | chr5.4:72193903-72193922 | MS.gene038328:intron | 35.0% | |
| CTTGGAAGAATTTGATGCTA+TGG | - | chr5.4:72194463-72194482 | MS.gene038328:intron | 35.0% | |
| GAAATATGTGCACAATAGTC+AGG | - | chr5.4:72194118-72194137 | MS.gene038328:intron | 35.0% | |
| GAAGCTCTTTCAAATCTTCA+AGG | - | chr5.4:72195138-72195157 | MS.gene038328:intron | 35.0% | |
| GAGATTGATCTTTATGAGGT+TGG | - | chr5.4:72193514-72193533 | MS.gene038328:intron | 35.0% | |
| GCAACTTCTTCAGGAATTAA+GGG | - | chr5.4:72194607-72194626 | MS.gene038328:intron | 35.0% | |
| GGATAAGTGTTTAAAAGTGG+GGG | + | chr5.4:72192452-72192471 | None:intergenic | 35.0% | |
| GGGTATATATGTACAATACC+TGG | + | chr5.4:72193924-72193943 | None:intergenic | 35.0% | |
| GGTATATTACTAGTATGGTG+GGG | - | chr5.4:72192719-72192738 | MS.gene038328:intron | 35.0% | |
| GTATATTACTAGTATGGTGG+GGG | - | chr5.4:72192720-72192739 | MS.gene038328:intron | 35.0% | |
| GTGGTATATTACTAGTATGG+TGG | - | chr5.4:72192717-72192736 | MS.gene038328:intron | 35.0% | |
| GTTGTGTGAAACGTAGAATT+AGG | + | chr5.4:72191663-72191682 | None:intergenic | 35.0% | |
| TAACACAATGAGGATCAACT+GGG | + | chr5.4:72193944-72193963 | None:intergenic | 35.0% | |
| TAATTCCTGAAGAAGTTGCT+CGG | + | chr5.4:72194606-72194625 | None:intergenic | 35.0% | |
| TATCAACCATCAAGTAGAGA+AGG | + | chr5.4:72191803-72191822 | None:intergenic | 35.0% | |
| TATCAGTTACACTATTGCTG+TGG | - | chr5.4:72191189-72191208 | MS.gene038328:CDS | 35.0% | |
| TCAAATGCATTTCCCTTTGA+TGG | - | chr5.4:72193397-72193416 | MS.gene038328:intron | 35.0% | |
| TCGGTCGATCTATTTATGTT+TGG | - | chr5.4:72191395-72191414 | MS.gene038328:CDS | 35.0% | |
| TCTTCCTCAATGTATGTCAA+TGG | + | chr5.4:72192087-72192106 | None:intergenic | 35.0% | |
| TGAAGCTCAACAATCAAAAG+GGG | - | chr5.4:72194376-72194395 | MS.gene038328:intron | 35.0% | |
| TGTATGTCAATGGCCTATAT+GGG | + | chr5.4:72192077-72192096 | None:intergenic | 35.0% | |
| TTAATTTCCTGCACAGCAAT+AGG | + | chr5.4:72193844-72193863 | None:intergenic | 35.0% | |
| TTCAACCAAGTCTCCTTTAA+AGG | + | chr5.4:72194639-72194658 | None:intergenic | 35.0% | |
| TTGACATACATTGAGGAAGA+TGG | - | chr5.4:72192087-72192106 | MS.gene038328:intron | 35.0% | |
| TTGCATATGACTTACCAGAA+GGG | - | chr5.4:72193728-72193747 | MS.gene038328:intron | 35.0% | |
| TTGCCTGCAAAATCTAATAG+TGG | - | chr5.4:72192698-72192717 | MS.gene038328:intron | 35.0% | |
| TTGTATTCGGACCGTTAATT+AGG | - | chr5.4:72191573-72191592 | MS.gene038328:CDS | 35.0% | |
| TTTGTCCACATCCATTTCTT+CGG | + | chr5.4:72194351-72194370 | None:intergenic | 35.0% | |
| TTTGTGGCTAAGAGAGAAAA+AGG | + | chr5.4:72194281-72194300 | None:intergenic | 35.0% | |
| ! | ACTTGATTTGATCATCAACG+AGG | + | chr5.4:72195063-72195082 | None:intergenic | 35.0% |
| ! | ATCCCACAAATTGATGGTAT+TGG | - | chr5.4:72191776-72191795 | MS.gene038328:CDS | 35.0% |
| ! | CCAGAAATTTTGAATAGTGG+GGG | - | chr5.4:72192256-72192275 | MS.gene038328:intron | 35.0% |
| ! | CCATTTTCTAACTGCATTCA+TGG | + | chr5.4:72194020-72194039 | None:intergenic | 35.0% |
| ! | GAGCCAGAAATTTTGAATAG+TGG | - | chr5.4:72192253-72192272 | MS.gene038328:intron | 35.0% |
| ! | GCCAGAAATTTTGAATAGTG+GGG | - | chr5.4:72192255-72192274 | MS.gene038328:intron | 35.0% |
| ! | TAGATTTCAGTTTTTGTGCC+AGG | - | chr5.4:72192859-72192878 | MS.gene038328:intron | 35.0% |
| ! | TATATTACTAGTATGGTGGG+GGG | - | chr5.4:72192721-72192740 | MS.gene038328:intron | 35.0% |
| ! | TATTGCCTTTAAAGGAGACT+TGG | - | chr5.4:72194631-72194650 | MS.gene038328:intron | 35.0% |
| ! | TCCCACAAATTGATGGTATT+GGG | - | chr5.4:72191777-72191796 | MS.gene038328:CDS | 35.0% |
| ! | TGATCTTTATGAGGTTGGTT+TGG | - | chr5.4:72193519-72193538 | MS.gene038328:intron | 35.0% |
| ! | TTAAATGAGTTGGCTGGTTA+TGG | - | chr5.4:72193481-72193500 | MS.gene038328:intron | 35.0% |
| ! | TTCTTCATCGTTGGATTTTG+TGG | + | chr5.4:72194297-72194316 | None:intergenic | 35.0% |
| !! | CATTTTAACACAGTGAGATG+GGG | - | chr5.4:72192497-72192516 | MS.gene038328:intron | 35.0% |
| !! | CTTCATCAAAGGAGTATTCT+CGG | + | chr5.4:72191373-72191392 | None:intergenic | 35.0% |
| !! | GACATTTTAACACAGTGAGA+TGG | - | chr5.4:72192495-72192514 | MS.gene038328:intron | 35.0% |
| !! | GATCTTTATGAGGTTGGTTT+GGG | - | chr5.4:72193520-72193539 | MS.gene038328:intron | 35.0% |
| !! | GTCTATGCTGACTAATTTTG+AGG | + | chr5.4:72194444-72194463 | None:intergenic | 35.0% |
| !!! | ACTTGCAAGTGGTTTTGTTT+TGG | - | chr5.4:72192964-72192983 | MS.gene038328:CDS | 35.0% |
| AATTCCTGAAGAAGTTGCTC+GGG | + | chr5.4:72194605-72194624 | None:intergenic | 40.0% | |
| ACCATACATATCGCCCATAT+AGG | - | chr5.4:72192061-72192080 | MS.gene038328:intron | 40.0% | |
| ACCTTCTCAACAACATTGTG+AGG | - | chr5.4:72194774-72194793 | MS.gene038328:intron | 40.0% | |
| AGAAAGAGATGATCGTAGGT+GGG | - | chr5.4:72192381-72192400 | MS.gene038328:intron | 40.0% | |
| AGAGAGAAAGAGATGATCGT+AGG | - | chr5.4:72192377-72192396 | MS.gene038328:intron | 40.0% | |
| AGCTGTTATGCCAAACTCTT+TGG | + | chr5.4:72192004-72192023 | None:intergenic | 40.0% | |
| ATGGTAGATGAGGATGTCAT+TGG | - | chr5.4:72194482-72194501 | MS.gene038328:intron | 40.0% | |
| CAACGATGAAGAATCATTGG+AGG | - | chr5.4:72194304-72194323 | MS.gene038328:intron | 40.0% | |
| CCAACATAACTGCCATCAAA+GGG | + | chr5.4:72193412-72193431 | None:intergenic | 40.0% | |
| CCCCCACTATTCAAAATTTC+TGG | + | chr5.4:72192259-72192278 | None:intergenic | 40.0% | |
| CCTTCAGTGCTTCATTATCT+TGG | + | chr5.4:72194859-72194878 | None:intergenic | 40.0% | |
| CTATCATGTTGTATTGGGTC+TGG | - | chr5.4:72191420-72191439 | MS.gene038328:CDS | 40.0% | |
| CTCCAATGATTCTTCATCGT+TGG | + | chr5.4:72194306-72194325 | None:intergenic | 40.0% | |
| CTTGCATATGACTTACCAGA+AGG | - | chr5.4:72193727-72193746 | MS.gene038328:intron | 40.0% | |
| GAGATCAGAAGAATCAGAAC+CGG | + | chr5.4:72193779-72193798 | None:intergenic | 40.0% | |
| GCCCAATACCATCAATTTGT+GGG | + | chr5.4:72191781-72191800 | None:intergenic | 40.0% | |
| GGTAAAATTAACTGTTGGCC+TGG | + | chr5.4:72192880-72192899 | None:intergenic | 40.0% | |
| TACACTTCCATGAAACAAGG+AGG | - | chr5.4:72192327-72192346 | MS.gene038328:intron | 40.0% | |
| TAGGCCATTGACATACATTG+AGG | - | chr5.4:72192080-72192099 | MS.gene038328:intron | 40.0% | |
| TATAGCCGAAGAAATGGATG+TGG | - | chr5.4:72194343-72194362 | MS.gene038328:intron | 40.0% | |
| TCCAACATAACTGCCATCAA+AGG | + | chr5.4:72193413-72193432 | None:intergenic | 40.0% | |
| TCCAATTCAGATTGAGCTTC+TGG | + | chr5.4:72195109-72195128 | None:intergenic | 40.0% | |
| TCCAGAAGCTCAATCTGAAT+TGG | - | chr5.4:72195105-72195124 | MS.gene038328:intron | 40.0% | |
| TCCTCACAATGTTGTTGAGA+AGG | + | chr5.4:72194778-72194797 | None:intergenic | 40.0% | |
| TGCATATGACTTACCAGAAG+GGG | - | chr5.4:72193729-72193748 | MS.gene038328:intron | 40.0% | |
| TGTTTAGTCTGTTCCAGTAG+CGG | - | chr5.4:72192231-72192250 | MS.gene038328:intron | 40.0% | |
| TTATCACAGAGTAGCCTCAT+AGG | - | chr5.4:72191466-72191485 | MS.gene038328:CDS | 40.0% | |
| TTCCATGAAACAAGGAGGAA+TGG | - | chr5.4:72192332-72192351 | MS.gene038328:intron | 40.0% | |
| TTTCGAGACTTCTTGTCCTT+GGG | + | chr5.4:72194567-72194586 | None:intergenic | 40.0% | |
| ! | AACCATTCCTCCTTGTTTCA+TGG | + | chr5.4:72192337-72192356 | None:intergenic | 40.0% |
| ! | GACTTGTTCTAATTGGAGAG+AGG | + | chr5.4:72194741-72194760 | None:intergenic | 40.0% |
| ! | GGAAGAATGCTGGGATTTTA+AGG | + | chr5.4:72194546-72194565 | None:intergenic | 40.0% |
| ! | TCAAGGTTAAATGAGTTGGC+TGG | - | chr5.4:72193475-72193494 | MS.gene038328:intron | 40.0% |
| ! | TCTCTTATTGAGAGGTGCAA+TGG | + | chr5.4:72193264-72193283 | None:intergenic | 40.0% |
| !! | AATTTGTTGGGAGGGAAAGT+TGG | - | chr5.4:72192292-72192311 | MS.gene038328:intron | 40.0% |
| !! | AGAAACTCCTCACTTTTCCA+AGG | + | chr5.4:72191130-72191149 | None:intergenic | 40.0% |
| !! | CCAAGATAATGAAGCACTGA+AGG | - | chr5.4:72194856-72194875 | MS.gene038328:intron | 40.0% |
| !!! | TGTTTTGATCTCGTAGACCT+TGG | - | chr5.4:72191110-72191129 | MS.gene038328:CDS | 40.0% |
| AAATCCCAGCATTCTTCCCA+AGG | - | chr5.4:72194548-72194567 | MS.gene038328:intron | 45.0% | |
| AATTGTGCCTATTGCTGTGC+AGG | - | chr5.4:72193834-72193853 | MS.gene038328:intron | 45.0% | |
| ACAGAGACCACTCATGATGA+AGG | - | chr5.4:72194401-72194420 | MS.gene038328:intron | 45.0% | |
| ACAGGCTCACACATGACATT+TGG | + | chr5.4:72193874-72193893 | None:intergenic | 45.0% | |
| AGGACAAGAAGTCTCGAAAC+TGG | - | chr5.4:72194568-72194587 | MS.gene038328:intron | 45.0% | |
| ATCGACCGACACTTCATCAA+AGG | + | chr5.4:72191384-72191403 | None:intergenic | 45.0% | |
| ATGACTTACCAGAAGGGGAA+GGG | - | chr5.4:72193734-72193753 | MS.gene038328:intron | 45.0% | |
| ATTCCTGAAGAAGTTGCTCG+GGG | + | chr5.4:72194604-72194623 | None:intergenic | 45.0% | |
| ATTGGGCCTTCTCTACTTGA+TGG | - | chr5.4:72191794-72191813 | MS.gene038328:CDS | 45.0% | |
| CCTGTTCTAATGGCATCTTC+CGG | - | chr5.4:72193757-72193776 | MS.gene038328:intron | 45.0% | |
| CCTTGCAGAACAGATTGGAA+AGG | - | chr5.4:72191082-72191101 | MS.gene038328:CDS | 45.0% | |
| CCTTTCCAATCTGTTCTGCA+AGG | + | chr5.4:72191085-72191104 | None:intergenic | 45.0% | |
| GAAAGGGTTGCCAAAGAGTT+TGG | - | chr5.4:72191991-72192010 | MS.gene038328:CDS | 45.0% | |
| GAACGAGACTTAGCCAAGAA+CGG | - | chr5.4:72194827-72194846 | MS.gene038328:intron | 45.0% | |
| GAAGACCTTGCAGAACAGAT+TGG | - | chr5.4:72191077-72191096 | MS.gene038328:CDS | 45.0% | |
| GAGAAAGAGATGATCGTAGG+TGG | - | chr5.4:72192380-72192399 | MS.gene038328:intron | 45.0% | |
| GATGAAACTCAGTGACATGG+AGG | + | chr5.4:72191759-72191778 | None:intergenic | 45.0% | |
| GCCTATATGGGCGATATGTA+TGG | + | chr5.4:72192065-72192084 | None:intergenic | 45.0% | |
| GGAGATATATTTGTGCAGGC+AGG | - | chr5.4:72192742-72192761 | MS.gene038328:intron | 45.0% | |
| GGCCCAATACCATCAATTTG+TGG | + | chr5.4:72191782-72191801 | None:intergenic | 45.0% | |
| GGTAGCAAGATCAAGTGCAA+AGG | + | chr5.4:72191723-72191742 | None:intergenic | 45.0% | |
| GTTGGTACCTTCATCATGAG+TGG | + | chr5.4:72194411-72194430 | None:intergenic | 45.0% | |
| GTTTCGAGACTTCTTGTCCT+TGG | + | chr5.4:72194568-72194587 | None:intergenic | 45.0% | |
| TATGACTTACCAGAAGGGGA+AGG | - | chr5.4:72193733-72193752 | MS.gene038328:intron | 45.0% | |
| TCGTAGACCTTGGAAAAGTG+AGG | - | chr5.4:72191120-72191139 | MS.gene038328:CDS | 45.0% | |
| TGGGATGAAACTCAGTGACA+TGG | + | chr5.4:72191762-72191781 | None:intergenic | 45.0% | |
| TTGTCCTTGGGAAGAATGCT+GGG | + | chr5.4:72194555-72194574 | None:intergenic | 45.0% | |
| ! | AGCTCTATTCCAGCGCTTTT+GGG | - | chr5.4:72192020-72192039 | MS.gene038328:CDS | 45.0% |
| ! | ATGAAGGCACGTCAGGATAA+CGG | + | chr5.4:72194094-72194113 | None:intergenic | 45.0% |
| ! | CCCTTTGATGGCAGTTATGT+TGG | - | chr5.4:72193409-72193428 | MS.gene038328:intron | 45.0% |
| ! | CGAGAGAGTTGAGTTGTCTT+TGG | + | chr5.4:72194928-72194947 | None:intergenic | 45.0% |
| ! | GAGAGTTGAGTTGTCTTTGG+TGG | + | chr5.4:72194925-72194944 | None:intergenic | 45.0% |
| ! | TTCATGTATGAAGGCACGTC+AGG | + | chr5.4:72194101-72194120 | None:intergenic | 45.0% |
| !! | AAAATTTCTGGCTCCGCTAC+TGG | + | chr5.4:72192247-72192266 | None:intergenic | 45.0% |
| !! | ATTCCAGCGCTTTTGGGTAT+GGG | - | chr5.4:72192026-72192045 | MS.gene038328:CDS | 45.0% |
| !! | TATTCCAGCGCTTTTGGGTA+TGG | - | chr5.4:72192025-72192044 | MS.gene038328:CDS | 45.0% |
| AAACGTCACGAACAGACCAG+TGG | + | chr5.4:72192796-72192815 | None:intergenic | 50.0% | |
| AAGTTTGGGTCAAGCGGTCA+TGG | - | chr5.4:72193632-72193651 | MS.gene038328:intron | 50.0% | |
| AGAAATCGGTGTGCTGCGTT+AGG | + | chr5.4:72193008-72193027 | None:intergenic | 50.0% | |
| AGCCACACACAAGGTTGTGT+GGG | + | chr5.4:72192770-72192789 | None:intergenic | 50.0% | |
| CCGGAAGATGCCATTAGAAC+AGG | + | chr5.4:72193760-72193779 | None:intergenic | 50.0% | |
| CTTGTCCTTGGGAAGAATGC+TGG | + | chr5.4:72194556-72194575 | None:intergenic | 50.0% | |
| GGGGGGAGATATATTTGTGC+AGG | - | chr5.4:72192738-72192757 | MS.gene038328:intron | 50.0% | |
| GGGTCTGGTGCGCAATATAA+TGG | - | chr5.4:72191435-72191454 | MS.gene038328:CDS | 50.0% | |
| TACGACTCGTAGTGTCTGTG+AGG | + | chr5.4:72191687-72191706 | None:intergenic | 50.0% | |
| TTTGATCATCAACGAGGCGC+TGG | + | chr5.4:72195057-72195076 | None:intergenic | 50.0% | |
| ! | ACATCGGTTGAGAGCTGACA+TGG | + | chr5.4:72192473-72192492 | None:intergenic | 50.0% |
| ! | ATCTTGGTCAGTGCCGTTCT+TGG | + | chr5.4:72194843-72194862 | None:intergenic | 50.0% |
| ! | CAGCTCTATTCCAGCGCTTT+TGG | - | chr5.4:72192019-72192038 | MS.gene038328:CDS | 50.0% |
| !! | ATCAACGAGGCGCTGGAAAA+TGG | + | chr5.4:72195050-72195069 | None:intergenic | 50.0% |
| !! | TGTTTCTGGAAGTGGAGCCT+TGG | - | chr5.4:72193128-72193147 | MS.gene038328:intron | 50.0% |
| AAGAAGTTGCTCGGGGAGGT+TGG | + | chr5.4:72194597-72194616 | None:intergenic | 55.0% | |
| AGAAGTTGCTCGGGGAGGTT+GGG | + | chr5.4:72194596-72194615 | None:intergenic | 55.0% | |
| AGCCCACACAACCTTGTGTG+TGG | - | chr5.4:72192765-72192784 | MS.gene038328:CDS | 55.0% | |
| AGGGGAAGGGCCTGTTCTAA+TGG | - | chr5.4:72193747-72193766 | MS.gene038328:intron | 55.0% | |
| GAGCCACACACAAGGTTGTG+TGG | + | chr5.4:72192771-72192790 | None:intergenic | 55.0% | |
| GGGTCAAGCGGTCATGGTTT+CGG | - | chr5.4:72193638-72193657 | MS.gene038328:intron | 55.0% | |
| ! | TTGCCCATACCCAAAAGCGC+TGG | + | chr5.4:72192032-72192051 | None:intergenic | 55.0% |
| !! | GTTGGGAGGGAAAGTTGGTG+TGG | - | chr5.4:72192297-72192316 | MS.gene038328:intron | 55.0% |
| AGAACAGGCCCTTCCCCTTC+TGG | + | chr5.4:72193745-72193764 | None:intergenic | 60.0% | |
| CCTCCCCGAGCAACTTCTTC+AGG | - | chr5.4:72194598-72194617 | MS.gene038328:intron | 60.0% | |
| CCTGAAGAAGTTGCTCGGGG+AGG | + | chr5.4:72194601-72194620 | None:intergenic | 60.0% | |
| CGTCACGAACAGACCAGTGG+CGG | + | chr5.4:72192793-72192812 | None:intergenic | 60.0% | |
| TCTGGAAGTGGAGCCTTGGC+TGG | - | chr5.4:72193132-72193151 | MS.gene038328:intron | 60.0% | |
| CTTGTGTGTGGCTCCGCCAC+TGG | - | chr5.4:72192777-72192796 | MS.gene038328:CDS | 65.0% | |
| ! | CAGTGGCGGAGCCACACACA+AGG | + | chr5.4:72192779-72192798 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 72190918 | 72195177 | 72190918 | ID=MS.gene038328 |
| chr5.4 | mRNA | 72190918 | 72195177 | 72190918 | ID=MS.gene038328.t1;Parent=MS.gene038328 |
| chr5.4 | exon | 72195145 | 72195177 | 72195145 | ID=MS.gene038328.t1.exon1;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72195145 | 72195177 | 72195145 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72194911 | 72195030 | 72194911 | ID=MS.gene038328.t1.exon2;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72194911 | 72195030 | 72194911 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72193982 | 72194104 | 72193982 | ID=MS.gene038328.t1.exon3;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72193982 | 72194104 | 72193982 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72193297 | 72193377 | 72193297 | ID=MS.gene038328.t1.exon4;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72193297 | 72193377 | 72193297 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72192942 | 72193016 | 72192942 | ID=MS.gene038328.t1.exon5;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72192942 | 72193016 | 72192942 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72192762 | 72192844 | 72192762 | ID=MS.gene038328.t1.exon6;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72192762 | 72192844 | 72192762 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72192564 | 72192672 | 72192564 | ID=MS.gene038328.t1.exon7;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72192564 | 72192672 | 72192564 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72192171 | 72192239 | 72192171 | ID=MS.gene038328.t1.exon8;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72192171 | 72192239 | 72192171 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72191956 | 72192066 | 72191956 | ID=MS.gene038328.t1.exon9;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72191956 | 72192066 | 72191956 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| chr5.4 | exon | 72190918 | 72191820 | 72190918 | ID=MS.gene038328.t1.exon10;Parent=MS.gene038328.t1 |
| chr5.4 | CDS | 72190918 | 72191820 | 72190918 | ID=cds.MS.gene038328.t1;Parent=MS.gene038328.t1 |
| Gene Sequence |
| Protein sequence |
